DRMref Logo

Home

Download

Statistics

Landscape

Help

Contact

Center for Computational Systems Medicine
leaf

Gene summary

leaf

Datasets with differential expression of this gene

leaf

Expression of this gene in the resistant group across all datasets and cell types

leaf

Significant ligand-receptor pairs related to this gene (This gene does not contain this module)

leaf

Known drug resistance mechanisms of this gene (This gene does not contain this module)

leaf

MicroRNAs (miRNAs) regulating this gene

leaf

Motifs and transcription factors (TFs) regulating this gene

leaf

Acts as a transcription factor (This gene does not contain this module)

leaf

Acts as a drug target< (This gene does not contain this module)

Gene: PCMTD1

Summary for PCMTD1

Gene informationGene symbol

PCMTD1

Ensembl ID

ENSG00000168300

Entrez ID

115294

Gene nameprotein-L-isoaspartate (D-aspartate) O-methyltransferase domain containing 1
SynonymsFLJ10883
Gene typeprotein_coding
UniProtAcc

Q96MG8


Top

Dataset with differentially expressed gene: PCMTD1

check buttonDifferentially expression genes between the resistant and sensitive groups. A positive avg_log2FC represents significantly high expression in the resistant group, while a negative avg_log2FC represents significantly low expression in the resistant group.
DatasetSourceTissueCancer type level1Cancer type level2Drug typeRegimenTimepointCell typeavg_log2FCp_val_adj

GSE140440

DU145 and PC cell linesCell lineProstate cancerProstate cancerChemotherapydocetaxelNAMalignant cells1.419561.23e-03

GSE186960

Panc1 cell lineCell linePancreatic cancerPancreatic ductal adenocarcinoma (PDAC)ChemotherapygemcitabineNAMalignant cells0.3053962.91e-25

GSE168668

LNCaP cell lineCell lineProstate cancerProstate cancerTargeted therapyenzalutamideNAMalignant cells-0.2951670.00e+00

GSE199333

patientsBone marrow aspirateAcute myeloid leukemiaPrimary FLT3-ITD-mutated acute myeloid leukemia (AML)Targeted therapygilteritinibpostErythrocytes0.3645970.00e+00

Top

Expression of PCMTD1 in the resistant group across all datasets and cell types

check buttonRed dots represent significantly high expression in the resistant group, while blue dots represent significantly low expression in the resistant group. White dots represent that there is no significant difference in the expression of this gene between the resistant and sensitive groups. Blank represents that this cell type is not present in this dataset. (If the image exists, the user can click on it to enlarge it in a new window.)
boxplot

Top

Significant ligand-receptor pairs related to PCMTD1

check buttonThis table shows the significant ligand-receptor pairs related to this gene across all datasets, timepoints and conditions. (Complete files can be downloaded from the download section.)

Top

Known drug resistance mechanisms of this gene

check buttonThis table shows the known drug resistance mechanisms of this gene. Clicking on this gene will link to another database that displays more drug resistance-related information.

Top

MicroRNAs (miRNA) regulating PCMTD1

check buttonThis table shows the miRNAs with a score of more than 80 regulating this gene. (Complete files can be downloaded from the download section.)
Gene symbolmiRNAScoreGeneBank accession
PCMTD1hsa-miR-3121-3p88.5283NM_001286782
PCMTD1hsa-miR-128387.6586NM_001286782
PCMTD1hsa-miR-4661-5p87.5324NM_001286782
PCMTD1hsa-miR-313385.1434NM_001286782
PCMTD1hsa-miR-520e-5p84.6338NM_001286782
PCMTD1hsa-miR-450284.2629NM_001286782
PCMTD1hsa-miR-367184.2353NM_001286782
PCMTD1hsa-miR-61784.1914NM_001286782
PCMTD1hsa-miR-365883.9574NM_001286782
PCMTD1hsa-miR-510083.8321NM_001286782
PCMTD1hsa-miR-216b-5p83.7951NM_001286782
PCMTD1hsa-miR-2115-3p83.1387NM_001286782
PCMTD1hsa-miR-6507-5p82.0375NM_001286782
PCMTD1hsa-miR-4738-3p81.6942NM_001286782
PCMTD1hsa-miR-60781.1936NM_001286782
PCMTD1hsa-miR-676-5p81.1626NM_001286782
PCMTD1hsa-miR-340-5p81.1616NM_001286782
PCMTD1hsa-miR-374a-3p80.3461NM_001286782
Page: 1 2

Top

Motifs and transcription factors (TFs) regulating PCMTD1

check buttonThis table shows the Motifs and transcription factors (TFs) regulating this gene. (Complete files can be downloaded from the download section.)
Gene symbolmotifTF_highConf
PCMTD1metacluster_195.2EGR2; KLF10; KLF10; KLF11; KLF11; KLF11; KLF13; KLF13; KLF13; KLF13; KLF13; KLF14; KLF14; KLF14; KLF14; KLF14; KLF15; KLF15; KLF16; KLF3; KLF8; KLF9; KLF9; KLF9; SP1; SP1; SP1; SP3; SP3; SP4; SP8; SP8; SP8; SP9; SP9 (directAnnotation). EGR1; KLF1; KLF12; KLF13; KLF14; KLF14; KLF14; KLF14; KLF14; KLF14; KLF16; KLF17; KLF17; KLF17; KLF17; KLF18; KLF18; KLF18; KLF18; KLF18; KLF18; KLF2; KLF2; KLF2; KLF3; KLF4; KLF5; KLF5; KLF5; KLF6; KLF7; KLF7; KLF8; KLF9; SP1; SP3; SP4; SP4; SP5; SP5; SP5; SP6; SP7; SP8; SP9 (inferredBy_Orthology).
PCMTD1hocomoco__KLF13_HUMAN.H11MO.0.DKLF13 (directAnnotation).
PCMTD1transfac_pro__M04617ZBTB7A (directAnnotation).
PCMTD1metacluster_3.5KLF14; KLF15; KLF15; KLF16 (directAnnotation).
PCMTD1kznf__ZNF529_Imbeault2017_RP_ChIP-seqZNF529 (directAnnotation).
PCMTD1taipale_cyt_meth__ZNF460_NRMCGCCCCCCGN_eDBD_methZNF460 (directAnnotation).
PCMTD1taipale_cyt_meth__E2F2_NCGCGCGCGCM_eDBD_methE2F2 (directAnnotation).
PCMTD1transfac_pro__M07387ZBTB7A (directAnnotation).
PCMTD1transfac_pro__M07436WT1 (directAnnotation).
PCMTD1transfac_pro__M07461KLF1; KLF10; KLF11; KLF12; KLF13; KLF15; KLF16; KLF17; KLF2; KLF3; KLF4; KLF5; KLF6; KLF7; KLF8; KLF9 (directAnnotation).
PCMTD1transfac_pro__M00716ZBTB14 (directAnnotation).
PCMTD1swissregulon__hs__CHD1CHD1 (directAnnotation).
PCMTD1hdpi__HIP2UBE2K (directAnnotation).
PCMTD1taipale_tf_pairs__GCM1_SPDEF_RTGNKGGCGGAWG_CAP_reprGCM1; SPDEF (directAnnotation).
PCMTD1metacluster_170.2KLF1; KLF10; KLF10; KLF11; KLF11; KLF11; KLF12; KLF12; KLF14; KLF15; KLF17; KLF2; KLF5; KLF7; KLF7; KLF8; MAZ; MAZ; PATZ1; SP1; SP1; SP1; SP2; SP2; SP2; SP2; SP2; SP2; SP2; SP2; SP4; SP4; SP5; SP6; SP7; SP8; SP9; ZNF281 (directAnnotation). E2F1; E2F4; KLF10; KLF13; KLF14; KLF17; KLF2; KLF7; SP1; SP1; SP3; SP4; SP5; SP6; SP7 (inferredBy_Orthology).
PCMTD1transfac_pro__M04893TAF1 (directAnnotation).
PCMTD1transfac_pro__M03876ZBTB33 (directAnnotation).
PCMTD1metacluster_15.2E2F1; E2F1; E2F1; E2F1; E2F1; E2F3; E2F4; E2F4; E2F4; E2F6; E2F6; E2F6; E2F6; E2F6; E2F6; E2F6; E2F7; TFDP1; TFDP2; ZNF566; ZNF566; ZNF574 (directAnnotation). E2F3; E2F3; E2F4 (inferredBy_Orthology).
PCMTD1metacluster_133.1ZNF304; ZNF304; ZSCAN22 (directAnnotation).
PCMTD1kznf__ZNF441_Imbeault2017_RP_RCADEZNF441 (directAnnotation).
PCMTD1transfac_pro__M01219SP1 (directAnnotation). SP3 (inferredBy_Orthology).
PCMTD1metacluster_3.7SP1; SP1; SP1; SP1; SP1; SP1; SP1; SP1; SP2; SP2; SP2; SP2; SP3; SP3; SP3; SP4; SP4; SP4; SP4; SP4; SP4; SP5 (directAnnotation).
PCMTD1metacluster_144.8ZNF30; ZNF30 (directAnnotation).
PCMTD1dbtfbs__GMEB1_K562_ENCSR928KOR_merged_N1GMEB1 (directAnnotation).
PCMTD1metacluster_7.5PLAGL1; PLAGL1 (directAnnotation).
PCMTD1metacluster_7.13ZFX (directAnnotation).
PCMTD1metacluster_144.3ZNF704; ZNF704 (directAnnotation).
PCMTD1tfdimers__MD00154MZF1; SREBF1 (directAnnotation).
PCMTD1kznf__ZNF730_Imbeault2017_RP_RCADEZNF730 (directAnnotation).
PCMTD1metacluster_155.23BCL11B; ZNF711; ZNF711 (directAnnotation). ZFY (inferredBy_Orthology).
PCMTD1cisbp__M00249WT1 (directAnnotation).
PCMTD1cisbp__M01863ZNF711 (inferredBy_Orthology).
PCMTD1taipale_tf_pairs__GCM1_ELF1_GTGCGGGCGGAAGTN_CAP_reprELF1; GCM1 (directAnnotation).
PCMTD1homer__GGCGGGAARN_E2F6E2F6 (directAnnotation).
PCMTD1kznf__ZNF571_Imbeault2017_OM_RCADEZNF571 (directAnnotation).
PCMTD1transfac_pro__M01298MECP2 (directAnnotation).
PCMTD1transfac_pro__M01973PLAG1 (directAnnotation).
PCMTD1metacluster_34.3EGR1; ETS1; SETDB1; SIX5; SIX5; ZNF143; ZNF76 (directAnnotation).
PCMTD1taipale_tf_pairs__ETV2_HES7_RSCGGAANNNNNNCACGTGNN_CAP_reprETV2; HES7 (directAnnotation).
PCMTD1metacluster_143.13ZBTB7A (directAnnotation).
PCMTD1transfac_pro__M05845ZSCAN29 (directAnnotation).
PCMTD1taipale_tf_pairs__E2F3_HES7_NNNNGCGCSNNNNNCACGTGNN_CAPE2F3; HES7 (directAnnotation).
PCMTD1transfac_pro__M02089E2F3 (directAnnotation).
PCMTD1transfac_pro__M04817ZBTB33 (directAnnotation).
PCMTD1transfac_pro__M02861GATA6 (inferredBy_Orthology).
PCMTD1tfdimers__MD00483ZBTB14 (directAnnotation).
PCMTD1cisbp__M07938E2F1 (directAnnotation).
PCMTD1cisbp__M00968MTF2 (directAnnotation).
PCMTD1jaspar__MA0535.1SMAD9 (inferredBy_Orthology).
PCMTD1metacluster_15.1E2F4; E2F4; E2F4; E2F4; E2F7; ZFP69B (directAnnotation). E2F4 (inferredBy_Orthology).
Page: 1 2

Top

Acts as a transcription factor

check buttonThis table shows that this differential gene acts as a transcription factor.

Top

Acts as a drug target

check buttonThis table shows that this differential gene acts as a drug target.



1"Sun X, Zhang Y, Li H, Zhou Y, Shi S, Chen Z, He X, Zhang H, Li F, Yin J, Mou M, Wang Y, Qiu Y, Zhu F. DRESIS: the first comprehensive landscape of drug resistance information. Nucleic Acids Res. 2023 Jan 6;51(D1):D1263-D1275. doi: 10.1093/nar/gkac812. PMID: 36243960; PMCID: PMC9825618."
2"Wishart DS, Feunang YD, Guo AC, Lo EJ, Marcu A, Grant JR, Sajed T, Johnson D, Li C, Sayeeda Z, Assempour N, Iynkkaran I, Liu Y, Maciejewski A, Gale N, Wilson A, Chin L, Cummings R, Le D, Pon A, Knox C, Wilson M. DrugBank 5.0: a major update to the DrugBank database for 2018. Nucleic Acids Res. 2018 Jan 4;46(D1):D1074-D1082. doi: 10.1093/nar/gkx1037. PMID: 29126136; PMCID: PMC5753335."