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Center for Computational Systems Medicine
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Gene summary

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Datasets with differential expression of this gene

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Expression of this gene in the resistant group across all datasets and cell types

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Significant ligand-receptor pairs related to this gene (This gene does not contain this module)

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Known drug resistance mechanisms of this gene (This gene does not contain this module)

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MicroRNAs (miRNAs) regulating this gene

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Motifs and transcription factors (TFs) regulating this gene

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Acts as a transcription factor (This gene does not contain this module)

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Acts as a drug target< (This gene does not contain this module)

Gene: PCDH17

Summary for PCDH17

Gene informationGene symbol

PCDH17

Ensembl ID

ENSG00000118946

Entrez ID

27253

Gene nameprotocadherin 17
SynonymsPCDH68|PCH68
Gene typeprotein_coding
UniProtAcc

O14917


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Dataset with differentially expressed gene: PCDH17

check buttonDifferentially expression genes between the resistant and sensitive groups. A positive avg_log2FC represents significantly high expression in the resistant group, while a negative avg_log2FC represents significantly low expression in the resistant group.
DatasetSourceTissueCancer type level1Cancer type level2Drug typeRegimenTimepointCell typeavg_log2FCp_val_adj

GSE186960

Panc1 cell lineCell linePancreatic cancerPancreatic ductal adenocarcinoma (PDAC)ChemotherapygemcitabineNAMalignant cells0.7795420.00e+00

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Expression of PCDH17 in the resistant group across all datasets and cell types

check buttonRed dots represent significantly high expression in the resistant group, while blue dots represent significantly low expression in the resistant group. White dots represent that there is no significant difference in the expression of this gene between the resistant and sensitive groups. Blank represents that this cell type is not present in this dataset. (If the image exists, the user can click on it to enlarge it in a new window.)
boxplot

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Significant ligand-receptor pairs related to PCDH17

check buttonThis table shows the significant ligand-receptor pairs related to this gene across all datasets, timepoints and conditions. (Complete files can be downloaded from the download section.)

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Known drug resistance mechanisms of this gene

check buttonThis table shows the known drug resistance mechanisms of this gene. Clicking on this gene will link to another database that displays more drug resistance-related information.

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MicroRNAs (miRNA) regulating PCDH17

check buttonThis table shows the miRNAs with a score of more than 80 regulating this gene. (Complete files can be downloaded from the download section.)
Gene symbolmiRNAScoreGeneBank accession
PCDH17hsa-let-7f-2-3p90.5002NM_001040429
PCDH17hsa-miR-314990.4127NM_001040429
PCDH17hsa-miR-120090.3724NM_001040429
PCDH17hsa-miR-4772-3p90.181NM_001040429
PCDH17hsa-miR-550a-3p90.0918NM_001040429
PCDH17hsa-miR-130a-5p90.0909NM_001040429
PCDH17hsa-miR-374c-3p89.7128NM_001040429
PCDH17hsa-miR-1250-3p89.3472NM_001040429
PCDH17hsa-miR-93688.4942NM_001040429
PCDH17hsa-miR-133b88.4334NM_001040429
PCDH17hsa-miR-133a-3p88.4334NM_001040429
PCDH17hsa-miR-4436a88.3405NM_001040429
PCDH17hsa-miR-34b-3p87.9987NM_001040429
PCDH17hsa-miR-430787.8463NM_001040429
PCDH17hsa-miR-200c-5p87.6442NM_001040429
PCDH17hsa-miR-426587.4928NM_001040429
PCDH17hsa-miR-432287.4928NM_001040429
PCDH17hsa-miR-153-5p87.4921NM_001040429
PCDH17hsa-miR-4520-3p87.2175NM_001040429
PCDH17hsa-miR-450287.0053NM_001040429
PCDH17hsa-miR-56986.7927NM_001040429
PCDH17hsa-miR-221-5p86.3783NM_001040429
PCDH17hsa-miR-807386.3783NM_001040429
PCDH17hsa-miR-3140-3p86.0582NM_001040429
PCDH17hsa-miR-316385.8458NM_001040429
PCDH17hsa-miR-122b-5p85.8034NM_001040429
PCDH17hsa-miR-445785.773NM_001040429
PCDH17hsa-miR-146a-3p85.6715NM_001040429
PCDH17hsa-miR-561-3p85.1141NM_001040429
PCDH17hsa-miR-190b-3p84.9014NM_001040429
PCDH17hsa-miR-1212984.5128NM_001040429
PCDH17hsa-miR-569084.2775NM_001040429
PCDH17hsa-miR-548an83.7412NM_001040429
PCDH17hsa-miR-9983-3p83.1923NM_001040429
PCDH17hsa-miR-670-3p83.0715NM_001040429
PCDH17hsa-miR-4799-5p82.9831NM_001040429
PCDH17hsa-miR-335-3p82.6046NM_001040429
PCDH17hsa-miR-4520-2-3p82.517NM_001040429
PCDH17hsa-miR-339-5p82.2819NM_001040429
PCDH17hsa-miR-130b-5p82.181NM_001040429
PCDH17hsa-miR-5196-3p81.9844NM_001040429
PCDH17hsa-miR-4743-3p81.8499NM_001040429
PCDH17hsa-miR-676-3p81.7711NM_001040429
PCDH17hsa-miR-6734-5p81.4991NM_001040429
PCDH17hsa-miR-576-5p81.4626NM_001040429
PCDH17hsa-miR-5587-5p81.028NM_001040429
PCDH17hsa-miR-129-5p80.5803NM_001040429
PCDH17hsa-miR-654-3p80.4722NM_001040429
PCDH17hsa-miR-6737-3p80.4594NM_001040429
PCDH17hsa-miR-7157-3p80.4594NM_001040429
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Motifs and transcription factors (TFs) regulating PCDH17

check buttonThis table shows the Motifs and transcription factors (TFs) regulating this gene. (Complete files can be downloaded from the download section.)
Gene symbolmotifTF_highConf
PCDH17metacluster_174.3MBD2; NFYA; NFYB; NFYC; PBX3 (directAnnotation).
PCDH17metacluster_174.2CEBPZ; CEBPZ; DRAP1; FOS; FOXI1; FOXI1; HMGXB3; IRF3; NFYA; NFYA; NFYA; NFYA; NFYA; NFYA; NFYA; NFYA; NFYA; NFYB; NFYB; NFYB; NFYB; NFYB; NFYC; NFYC; NFYC; NFYC; NFYC; NFYC; NFYC; PBX3; PBX3; SP2 (directAnnotation). NFYA; NFYA; NFYC; PBX1; PBX3 (inferredBy_Orthology).
PCDH17jaspar__MA0502.2NFYB (directAnnotation).
PCDH17metacluster_144.8ZNF30; ZNF30 (directAnnotation).
PCDH17tfdimers__MD00154MZF1; SREBF1 (directAnnotation).
PCDH17kznf__ZNF730_Imbeault2017_RP_RCADEZNF730 (directAnnotation).
PCDH17transfac_pro__M01219SP1 (directAnnotation). SP3 (inferredBy_Orthology).
PCDH17cisbp__M00249WT1 (directAnnotation).
PCDH17taipale_tf_pairs__GCM1_ELF1_GTGCGGGCGGAAGTN_CAP_reprELF1; GCM1 (directAnnotation).
PCDH17homer__GGCGGGAARN_E2F6E2F6 (directAnnotation).
PCDH17taipale_cyt_meth__ZNF460_NRMCGCCCCCCGN_eDBD_methZNF460 (directAnnotation).
PCDH17kznf__ZNF571_Imbeault2017_OM_RCADEZNF571 (directAnnotation).
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Acts as a transcription factor

check buttonThis table shows that this differential gene acts as a transcription factor.

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Acts as a drug target

check buttonThis table shows that this differential gene acts as a drug target.



1"Sun X, Zhang Y, Li H, Zhou Y, Shi S, Chen Z, He X, Zhang H, Li F, Yin J, Mou M, Wang Y, Qiu Y, Zhu F. DRESIS: the first comprehensive landscape of drug resistance information. Nucleic Acids Res. 2023 Jan 6;51(D1):D1263-D1275. doi: 10.1093/nar/gkac812. PMID: 36243960; PMCID: PMC9825618."
2"Wishart DS, Feunang YD, Guo AC, Lo EJ, Marcu A, Grant JR, Sajed T, Johnson D, Li C, Sayeeda Z, Assempour N, Iynkkaran I, Liu Y, Maciejewski A, Gale N, Wilson A, Chin L, Cummings R, Le D, Pon A, Knox C, Wilson M. DrugBank 5.0: a major update to the DrugBank database for 2018. Nucleic Acids Res. 2018 Jan 4;46(D1):D1074-D1082. doi: 10.1093/nar/gkx1037. PMID: 29126136; PMCID: PMC5753335."