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Center for Computational Systems Medicine
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Gene summary

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Datasets with differential expression of this gene

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Expression of this gene in the resistant group across all datasets and cell types

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Significant ligand-receptor pairs related to this gene (This gene does not contain this module)

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Known drug resistance mechanisms of this gene (This gene does not contain this module)

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MicroRNAs (miRNAs) regulating this gene

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Motifs and transcription factors (TFs) regulating this gene (This gene does not contain this module)

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Acts as a transcription factor

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Acts as a drug target< (This gene does not contain this module)

Gene: PBX1

Summary for PBX1

Gene informationGene symbol

PBX1

Ensembl ID

ENSG00000185630

Entrez ID

5087

Gene namePBX homeobox 1
SynonymsNA
Gene typeprotein_coding
UniProtAcc

P40424


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Dataset with differentially expressed gene: PBX1

check buttonDifferentially expression genes between the resistant and sensitive groups. A positive avg_log2FC represents significantly high expression in the resistant group, while a negative avg_log2FC represents significantly low expression in the resistant group.
DatasetSourceTissueCancer type level1Cancer type level2Drug typeRegimenTimepointCell typeavg_log2FCp_val_adj

GSE163836

FCIBC02 cell lineCell lineBreast cancerInflammatory breast cancerChemotherapypaclitaxelNAMalignant cells0.4294410.00e+00

GSE104987

MCF7 cell lineCell lineBreast cancerER+ breast cancerTargeted therapyKDM5-C70NAMalignant cells-0.3290842.02e-13

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Expression of PBX1 in the resistant group across all datasets and cell types

check buttonRed dots represent significantly high expression in the resistant group, while blue dots represent significantly low expression in the resistant group. White dots represent that there is no significant difference in the expression of this gene between the resistant and sensitive groups. Blank represents that this cell type is not present in this dataset. (If the image exists, the user can click on it to enlarge it in a new window.)
boxplot

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Significant ligand-receptor pairs related to PBX1

check buttonThis table shows the significant ligand-receptor pairs related to this gene across all datasets, timepoints and conditions. (Complete files can be downloaded from the download section.)

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Known drug resistance mechanisms of this gene

check buttonThis table shows the known drug resistance mechanisms of this gene. Clicking on this gene will link to another database that displays more drug resistance-related information.

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MicroRNAs (miRNA) regulating PBX1

check buttonThis table shows the miRNAs with a score of more than 80 regulating this gene. (Complete files can be downloaded from the download section.)
Gene symbolmiRNAScoreGeneBank accession
PBX1hsa-miR-61389.8299NM_002585
PBX1hsa-miR-427689.725NM_002585
PBX1hsa-miR-442889.3784NM_002585
PBX1hsa-miR-1271-3p89.1722NM_001204961
PBX1hsa-miR-5187-5p88.927NM_001204963
PBX1hsa-miR-105-5p88.5303NM_001204961
PBX1hsa-miR-7853-5p88.5303NM_001204961
PBX1hsa-miR-60788.5014NM_001204961
PBX1hsa-miR-19888.389NM_001204961
PBX1hsa-miR-6715a-3p88.3797NM_002585
PBX1hsa-miR-186-3p88.2543NM_002585
PBX1hsa-miR-1207-5p87.7134NM_002585
PBX1hsa-miR-4763-3p87.7134NM_002585
PBX1hsa-miR-366287.5355NM_001204961
PBX1hsa-miR-480386.7138NM_001204963
PBX1hsa-miR-891a-3p86.6866NM_002585
PBX1hsa-miR-550b-2-5p86.5385NM_002585
PBX1hsa-miR-684486.4924NM_002585
PBX1hsa-miR-550a-5p86.3862NM_001204961
PBX1hsa-miR-550a-3-5p86.3862NM_001204961
PBX1hsa-miR-65786.0612NM_001204963
PBX1hsa-miR-4482-5p84.9225NM_001204961
PBX1hsa-miR-4778-5p84.5586NM_001204961
PBX1hsa-miR-4680-3p84.3634NM_001204961
PBX1hsa-miR-3130-5p83.7397NM_001204961
PBX1hsa-miR-471983.6443NM_001204961
PBX1hsa-miR-317982.9019NM_001204961
PBX1hsa-miR-76582.8903NM_001204963
PBX1hsa-miR-5189-3p82.8063NM_001204961
PBX1hsa-miR-548p82.7911NM_001204963
PBX1hsa-miR-19b-2-5p82.7841NM_002585
PBX1hsa-miR-19b-1-5p82.7841NM_002585
PBX1hsa-miR-653-5p82.0715NM_002585
PBX1hsa-miR-428281.9828NM_001204963
PBX1hsa-miR-6881-3p81.5998NM_002585
PBX1hsa-miR-3160-5p81.4382NM_001204961
PBX1hsa-miR-998681.2714NM_002585
PBX1hsa-miR-129481.2714NM_002585
PBX1hsa-miR-6878-5p81.1955NM_001204961
PBX1hsa-miR-3173-5p81.0217NM_001204961
PBX1hsa-miR-6799-3p81.0217NM_001204961
PBX1hsa-miR-6747-3p81.011NM_001204961
PBX1hsa-miR-548aj-3p80.7247NM_001204961
PBX1hsa-miR-548x-3p80.7247NM_001204961
PBX1hsa-miR-524-5p80.6412NM_001204961
PBX1hsa-miR-520d-5p80.6412NM_001204961
PBX1hsa-miR-430780.2167NM_001204961
PBX1hsa-miR-20b-3p80.2082NM_001204963
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Motifs and transcription factors (TFs) regulating PBX1

check buttonThis table shows the Motifs and transcription factors (TFs) regulating this gene. (Complete files can be downloaded from the download section.)

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Acts as a transcription factor

check buttonThis table shows that this differential gene acts as a transcription factor.
TFmotifExpressionCell typeDatasetTimepoint
PBX1metacluster_174.2upMalignant cells

GSE163836

NA
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Acts as a drug target

check buttonThis table shows that this differential gene acts as a drug target.



1"Sun X, Zhang Y, Li H, Zhou Y, Shi S, Chen Z, He X, Zhang H, Li F, Yin J, Mou M, Wang Y, Qiu Y, Zhu F. DRESIS: the first comprehensive landscape of drug resistance information. Nucleic Acids Res. 2023 Jan 6;51(D1):D1263-D1275. doi: 10.1093/nar/gkac812. PMID: 36243960; PMCID: PMC9825618."
2"Wishart DS, Feunang YD, Guo AC, Lo EJ, Marcu A, Grant JR, Sajed T, Johnson D, Li C, Sayeeda Z, Assempour N, Iynkkaran I, Liu Y, Maciejewski A, Gale N, Wilson A, Chin L, Cummings R, Le D, Pon A, Knox C, Wilson M. DrugBank 5.0: a major update to the DrugBank database for 2018. Nucleic Acids Res. 2018 Jan 4;46(D1):D1074-D1082. doi: 10.1093/nar/gkx1037. PMID: 29126136; PMCID: PMC5753335."