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Center for Computational Systems Medicine
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Gene summary

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Datasets with differential expression of this gene

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Expression of this gene in the resistant group across all datasets and cell types

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Significant ligand-receptor pairs related to this gene (This gene does not contain this module)

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Known drug resistance mechanisms of this gene (This gene does not contain this module)

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MicroRNAs (miRNAs) regulating this gene

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Motifs and transcription factors (TFs) regulating this gene

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Acts as a transcription factor (This gene does not contain this module)

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Acts as a drug target< (This gene does not contain this module)

Gene: NBEA

Summary for NBEA

Gene informationGene symbol

NBEA

Ensembl ID

ENSG00000172915

Entrez ID

26960

Gene nameneurobeachin
SynonymsBCL8B|FLJ10197|KIAA1544|LYST2
Gene typeprotein_coding
UniProtAcc

NA


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Dataset with differentially expressed gene: NBEA

check buttonDifferentially expression genes between the resistant and sensitive groups. A positive avg_log2FC represents significantly high expression in the resistant group, while a negative avg_log2FC represents significantly low expression in the resistant group.
DatasetSourceTissueCancer type level1Cancer type level2Drug typeRegimenTimepointCell typeavg_log2FCp_val_adj

GSE115251

Kelly cell lineCell lineNeuroblastomaNeuroblastomaTargeted therapyTAE684NAMalignant cells-0.4138970.00e+00

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Expression of NBEA in the resistant group across all datasets and cell types

check buttonRed dots represent significantly high expression in the resistant group, while blue dots represent significantly low expression in the resistant group. White dots represent that there is no significant difference in the expression of this gene between the resistant and sensitive groups. Blank represents that this cell type is not present in this dataset. (If the image exists, the user can click on it to enlarge it in a new window.)
boxplot

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Significant ligand-receptor pairs related to NBEA

check buttonThis table shows the significant ligand-receptor pairs related to this gene across all datasets, timepoints and conditions. (Complete files can be downloaded from the download section.)

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Known drug resistance mechanisms of this gene

check buttonThis table shows the known drug resistance mechanisms of this gene. Clicking on this gene will link to another database that displays more drug resistance-related information.

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MicroRNAs (miRNA) regulating NBEA

check buttonThis table shows the miRNAs with a score of more than 80 regulating this gene. (Complete files can be downloaded from the download section.)
Gene symbolmiRNAScoreGeneBank accession
NBEAhsa-miR-6739-3p89.6122NM_015678
NBEAhsa-miR-17-5p89.506NM_015678
NBEAhsa-miR-519d-3p89.506NM_015678
NBEAhsa-miR-20b-5p89.506NM_015678
NBEAhsa-miR-93-5p89.506NM_015678
NBEAhsa-miR-494-3p89.3133NM_015678
NBEAhsa-miR-3680-3p88.9577NM_015678
NBEAhsa-miR-6832-3p88.4513NM_015678
NBEAhsa-miR-100-3p88.1271NM_015678
NBEAhsa-miR-4666a-3p87.8663NM_015678
NBEAhsa-miR-338-5p87.6725NM_015678
NBEAhsa-miR-5582-3p87.4357NM_015678
NBEAhsa-miR-660-5p87.3493NM_015678
NBEAhsa-miR-138-5p87.2606NM_015678
NBEAhsa-miR-190b-5p87.0481NM_015678
NBEAhsa-miR-190a-5p87.0481NM_015678
NBEAhsa-miR-5590-3p87.0331NM_015678
NBEAhsa-miR-142-5p87.0331NM_015678
NBEAhsa-miR-427686.409NM_015678
NBEAhsa-miR-187-5p86.0843NM_015678
NBEAhsa-miR-1-3p85.9938NM_015678
NBEAhsa-miR-20685.9938NM_015678
NBEAhsa-miR-311985.7376NM_015678
NBEAhsa-miR-651-3p85.6293NM_015678
NBEAhsa-miR-971885.4648NM_015678
NBEAhsa-miR-548b-3p85.4271NM_015678
NBEAhsa-miR-313385.3043NM_015678
NBEAhsa-let-7c-3p84.7554NM_015678
NBEAhsa-miR-425184.7467NM_015678
NBEAhsa-miR-1207-3p84.3798NM_015678
NBEAhsa-miR-670-3p84.2055NM_015678
NBEAhsa-miR-135a-5p84.1764NM_015678
NBEAhsa-miR-135b-5p84.1764NM_015678
NBEAhsa-miR-4677-5p83.4731NM_015678
NBEAhsa-miR-316583.0073NM_015678
NBEAhsa-miR-205-3p82.9515NM_015678
NBEAhsa-miR-488-5p82.7575NM_015678
NBEAhsa-miR-6804-3p82.5849NM_015678
NBEAhsa-miR-5197-5p82.4235NM_015678
NBEAhsa-miR-190a-3p81.7083NM_015678
NBEAhsa-miR-628-5p81.5977NM_015678
NBEAhsa-miR-10393-5p81.5219NM_001204197
NBEAhsa-miR-331-3p81.3974NM_015678
NBEAhsa-miR-5187-5p80.8354NM_015678
NBEAhsa-miR-392380.3968NM_015678
NBEAhsa-miR-61380.2503NM_015678
NBEAhsa-miR-56880.0569NM_015678
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Motifs and transcription factors (TFs) regulating NBEA

check buttonThis table shows the Motifs and transcription factors (TFs) regulating this gene. (Complete files can be downloaded from the download section.)
Gene symbolmotifTF_highConf
NBEAtransfac_pro__M06074ZNF732 (directAnnotation).
NBEAhocomoco__OTX1_HUMAN.H11MO.0.DOTX1 (directAnnotation).
NBEAtransfac_pro__M02843BBX (inferredBy_Orthology).
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Acts as a transcription factor

check buttonThis table shows that this differential gene acts as a transcription factor.

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Acts as a drug target

check buttonThis table shows that this differential gene acts as a drug target.



1"Sun X, Zhang Y, Li H, Zhou Y, Shi S, Chen Z, He X, Zhang H, Li F, Yin J, Mou M, Wang Y, Qiu Y, Zhu F. DRESIS: the first comprehensive landscape of drug resistance information. Nucleic Acids Res. 2023 Jan 6;51(D1):D1263-D1275. doi: 10.1093/nar/gkac812. PMID: 36243960; PMCID: PMC9825618."
2"Wishart DS, Feunang YD, Guo AC, Lo EJ, Marcu A, Grant JR, Sajed T, Johnson D, Li C, Sayeeda Z, Assempour N, Iynkkaran I, Liu Y, Maciejewski A, Gale N, Wilson A, Chin L, Cummings R, Le D, Pon A, Knox C, Wilson M. DrugBank 5.0: a major update to the DrugBank database for 2018. Nucleic Acids Res. 2018 Jan 4;46(D1):D1074-D1082. doi: 10.1093/nar/gkx1037. PMID: 29126136; PMCID: PMC5753335."