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Center for Computational Systems Medicine
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Gene summary

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Datasets with differential expression of this gene

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Expression of this gene in the resistant group across all datasets and cell types

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Significant ligand-receptor pairs related to this gene (This gene does not contain this module)

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Known drug resistance mechanisms of this gene (This gene does not contain this module)

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MicroRNAs (miRNAs) regulating this gene

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Motifs and transcription factors (TFs) regulating this gene

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Acts as a transcription factor

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Acts as a drug target< (This gene does not contain this module)

Gene: MBD2

Summary for MBD2

Gene informationGene symbol

MBD2

Ensembl ID

ENSG00000134046

Entrez ID

8932

Gene namemethyl-CpG binding domain protein 2
SynonymsNA
Gene typeprotein_coding
UniProtAcc

Q9UBB5


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Dataset with differentially expressed gene: MBD2

check buttonDifferentially expression genes between the resistant and sensitive groups. A positive avg_log2FC represents significantly high expression in the resistant group, while a negative avg_log2FC represents significantly low expression in the resistant group.
DatasetSourceTissueCancer type level1Cancer type level2Drug typeRegimenTimepointCell typeavg_log2FCp_val_adj

GSE197268_Tisa-cel

patientsPeripheral blood mononuclear cellsAcute lymphoblastic leukemiaLarge B-cell acute lymphoblastic leukemia (B-ALL)Immunotherapytisa-cel (CAR-T)preMono/Macro-0.3905081.82e-44

GSE189460

patientsBone marrow aspirateMultiple myelomaMultiple myeloma (MM)Targeted therapybortezomib + melphalan + prednisolonepreMalignant cells0.3029240.00e+00

GSE139386

H3122 cell lineCell lineLung cancerEML4-ALK fusion-positive non-small cell lung cancer (NSCLC)Targeted therapyceritinibNAMalignant cells-0.341930.00e+00

GSE199333

patientsBone marrow aspirateAcute myeloid leukemiaPrimary FLT3-ITD-mutated acute myeloid leukemia (AML)Targeted therapygilteritinibpreMalignant cells-0.2925060.00e+00

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Expression of MBD2 in the resistant group across all datasets and cell types

check buttonRed dots represent significantly high expression in the resistant group, while blue dots represent significantly low expression in the resistant group. White dots represent that there is no significant difference in the expression of this gene between the resistant and sensitive groups. Blank represents that this cell type is not present in this dataset. (If the image exists, the user can click on it to enlarge it in a new window.)
boxplot

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Significant ligand-receptor pairs related to MBD2

check buttonThis table shows the significant ligand-receptor pairs related to this gene across all datasets, timepoints and conditions. (Complete files can be downloaded from the download section.)

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Known drug resistance mechanisms of this gene

check buttonThis table shows the known drug resistance mechanisms of this gene. Clicking on this gene will link to another database that displays more drug resistance-related information.

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MicroRNAs (miRNA) regulating MBD2

check buttonThis table shows the miRNAs with a score of more than 80 regulating this gene. (Complete files can be downloaded from the download section.)
Gene symbolmiRNAScoreGeneBank accession
MBD2hsa-miR-520c-3p85.595NM_003927
MBD2hsa-miR-520d-3p85.595NM_003927
MBD2hsa-miR-372-3p85.595NM_003927
MBD2hsa-miR-520b-3p85.595NM_003927
MBD2hsa-miR-444785.3045NM_003927
MBD2hsa-miR-6809-5p85.1253NM_003927
MBD2hsa-miR-548p84.5812NM_015832
MBD2hsa-miR-469884.5201NM_003927
MBD2hsa-miR-806384.5201NM_003927
MBD2hsa-miR-7151-3p84.4536NM_003927
MBD2hsa-miR-3613-3p83.7752NM_003927
MBD2hsa-miR-3124-3p83.4991NM_003927
MBD2hsa-miR-98-5p83.2734NM_003927
MBD2hsa-let-7g-5p83.2734NM_003927
MBD2hsa-let-7c-5p83.2734NM_003927
MBD2hsa-let-7i-5p83.2734NM_003927
MBD2hsa-let-7e-5p83.2734NM_003927
MBD2hsa-let-7f-5p83.2734NM_003927
MBD2hsa-let-7b-5p83.2734NM_003927
MBD2hsa-let-7a-5p83.2734NM_003927
MBD2hsa-miR-391083.0889NM_003927
MBD2hsa-miR-445882.2951NM_003927
MBD2hsa-let-7d-5p82.2951NM_003927
MBD2hsa-miR-471982.2066NM_003927
MBD2hsa-miR-217-5p82.0723NM_003927
MBD2hsa-miR-6807-3p81.8737NM_003927
MBD2hsa-miR-365281.6012NM_003927
MBD2hsa-miR-443081.6012NM_003927
MBD2hsa-miR-450a-2-3p81.1084NM_003927
MBD2hsa-miR-471881.0854NM_003927
MBD2hsa-miR-1213681.0006NM_003927
MBD2hsa-miR-316880.607NM_003927
MBD2hsa-miR-10527-5p80.1945NM_015832
MBD2hsa-miR-3605-5p80.1423NM_003927
MBD2hsa-miR-208b-5p80.0891NM_003927
MBD2hsa-miR-208a-5p80.0891NM_003927
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Motifs and transcription factors (TFs) regulating MBD2

check buttonThis table shows the Motifs and transcription factors (TFs) regulating this gene. (Complete files can be downloaded from the download section.)
Gene symbolmotifTF_highConf
MBD2metacluster_55.3E2F6; EGR1; NRF1; NRF1; NRF1; NRF1; NRF1; NRF1; NRF1; NRF1; NRF1; NRF1; ZBTB2; ZSCAN10 (directAnnotation). NFE2L1; NRF1; NRF1; NRF1 (inferredBy_Orthology).
MBD2dbtfbs__E2F8_representative_N1E2F8 (directAnnotation).
MBD2transfac_pro__M04950EGR1 (directAnnotation).
MBD2metacluster_15.3E2F1; E2F6; E2F8; E2F8; TFDP1 (directAnnotation). E2F3 (inferredBy_Orthology).
MBD2taipale_tf_pairs__ETV2_HES7_NNCACGTGNNNNNCGGAWRY_CAP_reprETV2; HES7 (directAnnotation).
MBD2taipale_cyt_meth__E2F2_GCGCGCGCGYW_eDBD_reprE2F2 (directAnnotation).
MBD2taipale_tf_pairs__ERF_HES7_NNCACGTGNNNNCCGGAANN_CAP_reprERF; HES7 (directAnnotation).
MBD2metacluster_197.2E2F4; E2F7; E2F7; E2F7; E2F8; E2F8 (directAnnotation).
MBD2taipale_tf_pairs__E2F1_ELK1_SGCGCNNNNNCGGAAGN_CAP_reprE2F1; ELK1 (directAnnotation).
MBD2transfac_pro__M00652NRF1 (directAnnotation).
MBD2hdpi__ETV4ETV4 (directAnnotation).
MBD2taipale_tf_pairs__E2F1_HES7_RRCRCGYGYNNNNSGCGCSN_CAP_reprE2F1; HES7 (directAnnotation).
MBD2transfac_pro__M04866HDAC2 (directAnnotation).
MBD2jaspar__MA1122.1TFDP1 (directAnnotation).
MBD2metacluster_34.1ZNF143; ZNF143; ZNF143; ZNF76; ZNF76; ZNF76 (directAnnotation).
MBD2swissregulon__hs__ZBTB14ZBTB14 (directAnnotation).
MBD2metacluster_138.2ELF1; ELF2; ELF4; ELK1; ELK1; ELK1; ELK1; ELK3; ELK4; ELK4; ELK4; ELK4; ELK4; ELK4; ELK4; ERF; ERG; ERG; ERG; ERG; ETS1; ETS1; ETS2; ETS2; ETV1; ETV1; ETV1; ETV2; ETV3; ETV4; ETV5; ETV5; FEV; FLI1; FLI1; GABPA; GABPA; KMT2B; SPDEF; SPDEF; SPDEF; ZBTB11; ZNF518A; ZNF580 (directAnnotation). ELF1; ELF2; ELF4; ELK1; ELK1; ELK3; ELK4; ERG; ETS1; ETS2; ETV1; ETV2; ETV3; ETV4; ETV5; FEV; FLI1; FLI1; GABPA; SPDEF; SPDEF (inferredBy_Orthology).
MBD2taipale_tf_pairs__ETV2_HES7_RSCGGAANNNNNNCACGTGNN_CAP_reprETV2; HES7 (directAnnotation).
MBD2metacluster_29.6ZNF436 (directAnnotation).
MBD2tfdimers__MD00007E2F1; IRF8 (directAnnotation).
MBD2transfac_pro__M05853ZNF548 (directAnnotation).
MBD2metacluster_131.3ZNF436 (inferredBy_Orthology).
MBD2metacluster_144.8ZNF30; ZNF30 (directAnnotation).
MBD2metacluster_144.3ZNF704; ZNF704 (directAnnotation).
MBD2cisbp__M00249WT1 (directAnnotation).
MBD2metacluster_141.5NR3C1; THAP1; YY1; YY1; YY1; YY1; YY1; YY1; YY1; YY1; YY1; YY1; YY1; YY1; YY2; YY2; ZNF597 (directAnnotation). YY1; YY1; YY1; YY2; ZFP42 (inferredBy_Orthology).
MBD2transfac_pro__M01122ZNF219 (directAnnotation).
MBD2taipale_cyt_meth__ZNF460_NRMCGCCCCCCGN_eDBD_methZNF460 (directAnnotation).
MBD2taipale_tf_pairs__GCM1_SPDEF_RTGNKGGCGGAWG_CAP_reprGCM1; SPDEF (directAnnotation).
MBD2metacluster_7.13ZFX (directAnnotation).
MBD2kznf__ZNF571_Imbeault2017_OM_RCADEZNF571 (directAnnotation).
MBD2metacluster_7.5PLAGL1; PLAGL1 (directAnnotation).
MBD2taipale_tf_pairs__GCM1_ELF1_GTGCGGGCGGAAGTN_CAP_reprELF1; GCM1 (directAnnotation).
MBD2taipale_tf_pairs__E2F1_ELK1_SGCGCNNNNNNNNNNCGGAAGN_CAP_reprE2F1; ELK1 (directAnnotation).
MBD2swissregulon__hs__GLIS2GLIS2 (directAnnotation).
MBD2kznf__ZNF100_Imbeault2017_RP_RCADEZNF100 (directAnnotation).
MBD2metacluster_151.1KAT7; PML; SMAD5; TAF1; ZFP37; ZGPAT; ZNF519; ZNF519; ZNF571; ZNF770; ZNF770; ZNF770; ZSCAN22; ZSCAN22 (directAnnotation).
MBD2homer__GGGGGGGG_MazMAZ (directAnnotation).
MBD2taipale_tf_pairs__GCM1_SPDEF_RTRSKGGCGGANNNNNATCCNNN_CAP_reprGCM1; SPDEF (directAnnotation).
MBD2taipale_tf_pairs__GCM1_ERG_RTRYGGGCGGAARKN_CAPERG; GCM1 (directAnnotation).
MBD2transfac_pro__M01219SP1 (directAnnotation). SP3 (inferredBy_Orthology).
MBD2metacluster_84.2RARA (directAnnotation).
MBD2homer__TWVGGTCCGC_HINFPHINFP (directAnnotation).
MBD2metacluster_23.9GLIS1; GLIS3; GLIS3; ZNF575 (directAnnotation). GLIS2; GLIS2; GLIS3; ZNF575; ZXDA; ZXDA; ZXDA; ZXDA; ZXDB; ZXDB; ZXDB; ZXDB; ZXDC; ZXDC; ZXDC; ZXDC (inferredBy_Orthology).
MBD2transfac_pro__M01253CNOT3 (directAnnotation).
MBD2metacluster_3.10KLF2; KLF4 (directAnnotation).
MBD2metacluster_170.2KLF1; KLF10; KLF10; KLF11; KLF11; KLF11; KLF12; KLF12; KLF14; KLF15; KLF17; KLF2; KLF5; KLF7; KLF7; KLF8; MAZ; MAZ; PATZ1; SP1; SP1; SP1; SP2; SP2; SP2; SP2; SP2; SP2; SP2; SP2; SP4; SP4; SP5; SP6; SP7; SP8; SP9; ZNF281 (directAnnotation). E2F1; E2F4; KLF10; KLF13; KLF14; KLF17; KLF2; KLF7; SP1; SP1; SP3; SP4; SP5; SP6; SP7 (inferredBy_Orthology).
MBD2metacluster_195.2EGR2; KLF10; KLF10; KLF11; KLF11; KLF11; KLF13; KLF13; KLF13; KLF13; KLF13; KLF14; KLF14; KLF14; KLF14; KLF14; KLF15; KLF15; KLF16; KLF3; KLF8; KLF9; KLF9; KLF9; SP1; SP1; SP1; SP3; SP3; SP4; SP8; SP8; SP8; SP9; SP9 (directAnnotation). EGR1; KLF1; KLF12; KLF13; KLF14; KLF14; KLF14; KLF14; KLF14; KLF14; KLF16; KLF17; KLF17; KLF17; KLF17; KLF18; KLF18; KLF18; KLF18; KLF18; KLF18; KLF2; KLF2; KLF2; KLF3; KLF4; KLF5; KLF5; KLF5; KLF6; KLF7; KLF7; KLF8; KLF9; SP1; SP3; SP4; SP4; SP5; SP5; SP5; SP6; SP7; SP8; SP9 (inferredBy_Orthology).
MBD2swissregulon__hs__CHD1CHD1 (directAnnotation).
MBD2taipale_tf_pairs__ETV5_HES7_NNCACGTGNNNNCCGGAANN_CAPETV5; HES7 (directAnnotation).
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Acts as a transcription factor

check buttonThis table shows that this differential gene acts as a transcription factor.
TFmotifExpressionCell typeDatasetTimepoint
MBD2metacluster_174.3downMalignant cells

GSE139386

NA
MBD2metacluster_174.3downMalignant cells

GSE139386

NA
MBD2metacluster_174.3upMalignant cells

GSE189460

pre
MBD2metacluster_135.10downMalignant cells

GSE199333

pre
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Acts as a drug target

check buttonThis table shows that this differential gene acts as a drug target.



1"Sun X, Zhang Y, Li H, Zhou Y, Shi S, Chen Z, He X, Zhang H, Li F, Yin J, Mou M, Wang Y, Qiu Y, Zhu F. DRESIS: the first comprehensive landscape of drug resistance information. Nucleic Acids Res. 2023 Jan 6;51(D1):D1263-D1275. doi: 10.1093/nar/gkac812. PMID: 36243960; PMCID: PMC9825618."
2"Wishart DS, Feunang YD, Guo AC, Lo EJ, Marcu A, Grant JR, Sajed T, Johnson D, Li C, Sayeeda Z, Assempour N, Iynkkaran I, Liu Y, Maciejewski A, Gale N, Wilson A, Chin L, Cummings R, Le D, Pon A, Knox C, Wilson M. DrugBank 5.0: a major update to the DrugBank database for 2018. Nucleic Acids Res. 2018 Jan 4;46(D1):D1074-D1082. doi: 10.1093/nar/gkx1037. PMID: 29126136; PMCID: PMC5753335."