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Center for Computational Systems Medicine
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Gene summary

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Datasets with differential expression of this gene

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Expression of this gene in the resistant group across all datasets and cell types

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Significant ligand-receptor pairs related to this gene (This gene does not contain this module)

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Known drug resistance mechanisms of this gene (This gene does not contain this module)

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MicroRNAs (miRNAs) regulating this gene

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Motifs and transcription factors (TFs) regulating this gene

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Acts as a transcription factor (This gene does not contain this module)

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Acts as a drug target< (This gene does not contain this module)

Gene: LSM14A

Summary for LSM14A

Gene informationGene symbol

LSM14A

Ensembl ID

ENSG00000262860

Entrez ID

26065

Gene nameLSM14A mRNA processing body assembly factor
SynonymsC19orf13|DKFZP434D1335|FAM61A|RAP55|RAP55A
Gene typeprotein_coding
UniProtAcc

Q8ND56


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Dataset with differentially expressed gene: LSM14A

check buttonDifferentially expression genes between the resistant and sensitive groups. A positive avg_log2FC represents significantly high expression in the resistant group, while a negative avg_log2FC represents significantly low expression in the resistant group.
DatasetSourceTissueCancer type level1Cancer type level2Drug typeRegimenTimepointCell typeavg_log2FCp_val_adj

GSE186960

Panc1 cell lineCell linePancreatic cancerPancreatic ductal adenocarcinoma (PDAC)ChemotherapygemcitabineNAMalignant cells-1.267130.00e+00

GSE163836

FCIBC02 cell lineCell lineBreast cancerInflammatory breast cancerChemotherapypaclitaxelNAMalignant cells-0.4542780.00e+00

GSE169246_PacBlood

patientsPeripheral blood mononuclear cellsBreast cancerAdvanced triple-negative breast cancer (TNBC)ChemotherapypaclitaxelpreCD8+ T cells0.281520.00e+00

GSE169246_PacBlood

patientsPeripheral blood mononuclear cellsBreast cancerAdvanced triple-negative breast cancer (TNBC)ChemotherapypaclitaxelpreNK cells0.2698690.00e+00

GSE169246_PacBlood

patientsPeripheral blood mononuclear cellsBreast cancerAdvanced triple-negative breast cancer (TNBC)ChemotherapypaclitaxelpreB cells0.3191780.00e+00

GSE139386

H3122 cell lineCell lineLung cancerEML4-ALK fusion-positive non-small cell lung cancer (NSCLC)Targeted therapyceritinibNAMalignant cells-0.4225470.00e+00

GSE199333

patientsBone marrow aspirateAcute myeloid leukemiaPrimary FLT3-ITD-mutated acute myeloid leukemia (AML)Targeted therapygilteritinibpostNK cells-0.326362.15e-41

GSE199333

patientsBone marrow aspirateAcute myeloid leukemiaPrimary FLT3-ITD-mutated acute myeloid leukemia (AML)Targeted therapygilteritinibpreB cells-0.5671233.72e-03

GSE108397

451Lu cell lineCell lineMelanomaMelanomaTargeted therapyPLX-4720NAMalignant cells-0.3420150.00e+00

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Expression of LSM14A in the resistant group across all datasets and cell types

check buttonRed dots represent significantly high expression in the resistant group, while blue dots represent significantly low expression in the resistant group. White dots represent that there is no significant difference in the expression of this gene between the resistant and sensitive groups. Blank represents that this cell type is not present in this dataset. (If the image exists, the user can click on it to enlarge it in a new window.)
boxplot

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Significant ligand-receptor pairs related to LSM14A

check buttonThis table shows the significant ligand-receptor pairs related to this gene across all datasets, timepoints and conditions. (Complete files can be downloaded from the download section.)

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Known drug resistance mechanisms of this gene

check buttonThis table shows the known drug resistance mechanisms of this gene. Clicking on this gene will link to another database that displays more drug resistance-related information.

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MicroRNAs (miRNA) regulating LSM14A

check buttonThis table shows the miRNAs with a score of more than 80 regulating this gene. (Complete files can be downloaded from the download section.)
Gene symbolmiRNAScoreGeneBank accession
LSM14Ahsa-miR-806382.9726NM_015578
LSM14Ahsa-miR-450482.8805NM_001114093
LSM14Ahsa-miR-182-5p82.7948NM_001114093
LSM14Ahsa-miR-2276-3p82.6628NM_015578
LSM14Ahsa-miR-432882.6145NM_001114093
LSM14Ahsa-miR-182581.7086NM_001114093
LSM14Ahsa-miR-124-5p81.0419NM_015578
LSM14Ahsa-miR-6847-3p80.6987NM_015578
LSM14Ahsa-miR-203a-3p80.5901NM_001114093
LSM14Ahsa-miR-311680.1339NM_015578
LSM14Ahsa-miR-187-5p80.0969NM_015578
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Motifs and transcription factors (TFs) regulating LSM14A

check buttonThis table shows the Motifs and transcription factors (TFs) regulating this gene. (Complete files can be downloaded from the download section.)
Gene symbolmotifTF_highConf
LSM14Ametacluster_7.13ZFX (directAnnotation).
LSM14Acisbp__M01863ZNF711 (inferredBy_Orthology).
LSM14Ametacluster_151.2ZNF23 (directAnnotation).
LSM14Ametacluster_170.2KLF1; KLF10; KLF10; KLF11; KLF11; KLF11; KLF12; KLF12; KLF14; KLF15; KLF17; KLF2; KLF5; KLF7; KLF7; KLF8; MAZ; MAZ; PATZ1; SP1; SP1; SP1; SP2; SP2; SP2; SP2; SP2; SP2; SP2; SP2; SP4; SP4; SP5; SP6; SP7; SP8; SP9; ZNF281 (directAnnotation). E2F1; E2F4; KLF10; KLF13; KLF14; KLF17; KLF2; KLF7; SP1; SP1; SP3; SP4; SP5; SP6; SP7 (inferredBy_Orthology).
LSM14Ametacluster_155.23BCL11B; ZNF711; ZNF711 (directAnnotation). ZFY (inferredBy_Orthology).
LSM14Akznf__ZNF783_Imbeault2017_OM_MEMEZNF783 (directAnnotation).
LSM14Ametacluster_144.3ZNF704; ZNF704 (directAnnotation).
LSM14Ametacluster_182.10ZFX (directAnnotation).
LSM14Ahdpi__ETV4ETV4 (directAnnotation).
LSM14Ahomer__TWVGGTCCGC_HINFPHINFP (directAnnotation).
LSM14Ametacluster_135.10MBD2; MBD2; MECP2; MECP2 (directAnnotation).
LSM14Ataipale_tf_pairs__GCM1_SPDEF_RTRSKGGCGGANNNNNNATCCNNN_CAP_reprGCM1; SPDEF (directAnnotation).
LSM14Ajaspar__MA0079.5SP1 (directAnnotation).
LSM14Ataipale_tf_pairs__GCM1_ETV1_RTRNNGGCGGAAGTN_CAPETV1; GCM1 (directAnnotation).
LSM14Adbtfbs__E2F8_representative_N1E2F8 (directAnnotation).
LSM14Ametacluster_15.3E2F1; E2F6; E2F8; E2F8; TFDP1 (directAnnotation). E2F3 (inferredBy_Orthology).
LSM14Ataipale_tf_pairs__E2F1_HES7_RRCRCGYGYNNNNSGCGCSN_CAP_reprE2F1; HES7 (directAnnotation).
LSM14Ajaspar__MA1122.1TFDP1 (directAnnotation).
LSM14Ametacluster_34.1ZNF143; ZNF143; ZNF143; ZNF76; ZNF76; ZNF76 (directAnnotation).
LSM14Ametacluster_138.2ELF1; ELF2; ELF4; ELK1; ELK1; ELK1; ELK1; ELK3; ELK4; ELK4; ELK4; ELK4; ELK4; ELK4; ELK4; ERF; ERG; ERG; ERG; ERG; ETS1; ETS1; ETS2; ETS2; ETV1; ETV1; ETV1; ETV2; ETV3; ETV4; ETV5; ETV5; FEV; FLI1; FLI1; GABPA; GABPA; KMT2B; SPDEF; SPDEF; SPDEF; ZBTB11; ZNF518A; ZNF580 (directAnnotation). ELF1; ELF2; ELF4; ELK1; ELK1; ELK3; ELK4; ERG; ETS1; ETS2; ETV1; ETV2; ETV3; ETV4; ETV5; FEV; FLI1; FLI1; GABPA; SPDEF; SPDEF (inferredBy_Orthology).
LSM14Ahdpi__FLI1FLI1 (directAnnotation).
LSM14Ataipale_tf_pairs__ELK1_FOXI1_RSCGGATGTKKN_CAPELK1; FOXI1 (directAnnotation).
LSM14Acisbp__M02645ETS1 (directAnnotation).
LSM14Ataipale_tf_pairs__ETV2_DRGX_RSCGGAWRYATTA_CAP_reprDRGX; ETV2 (directAnnotation).
LSM14Atransfac_pro__M06331ZNF343 (directAnnotation).
LSM14Ahdpi__TP73TP73 (directAnnotation).
LSM14Atransfac_pro__M04826EP300 (directAnnotation).
LSM14Ametacluster_33.8BRCA1; CHD2; CHD2; ETS1; NR3C1; ZBED1; ZBED1; ZBED1; ZBTB33; ZBTB33; ZBTB33; ZBTB33; ZBTB33; ZBTB33; ZBTB33 (directAnnotation). CHD2; ZBTB33 (inferredBy_Orthology).
LSM14Ametacluster_141.6MZF1; TAF1; YY1; YY1; YY1; YY1; YY1; YY1; YY1; YY1; YY1; YY1; YY1; YY1; YY2; YY2; ZFP42; ZFP42; ZFP42; ZFP42; ZFP42; ZFP42; ZNF597 (directAnnotation). TAF1; TAF1L (inferredBy_Orthology).
LSM14Atransfac_pro__M04862NRF1 (directAnnotation).
LSM14Ajaspar__MA0748.2YY2 (directAnnotation).
LSM14Atransfac_pro__M01298MECP2 (directAnnotation).
LSM14Ametacluster_7.5PLAGL1; PLAGL1 (directAnnotation).
LSM14Atransfac_pro__M00492STAT1 (directAnnotation).
LSM14Acisbp__M00788ZFY (inferredBy_Orthology).
LSM14Ajaspar__MA0185.1DEAF1 (inferredBy_Orthology).
LSM14Akznf__ZNF100_Imbeault2017_RP_RCADEZNF100 (directAnnotation).
LSM14Ahdpi__TIMELESSTIMELESS (directAnnotation).
LSM14Ametacluster_191.5SPDEF (inferredBy_Orthology).
LSM14Ametacluster_126.3LIN28B; LIN28B (directAnnotation).
LSM14Atransfac_pro__M02913SP140 (inferredBy_Orthology).
LSM14Atransfac_pro__M01219SP1 (directAnnotation). SP3 (inferredBy_Orthology).
LSM14Ametacluster_151.1KAT7; PML; SMAD5; TAF1; ZFP37; ZGPAT; ZNF519; ZNF519; ZNF571; ZNF770; ZNF770; ZNF770; ZSCAN22; ZSCAN22 (directAnnotation).
LSM14Adbtfbs__ZSCAN30_HEK293_ENCSR768VNZ_merged_N1ZSCAN30 (directAnnotation).
LSM14Ametacluster_141.5NR3C1; THAP1; YY1; YY1; YY1; YY1; YY1; YY1; YY1; YY1; YY1; YY1; YY1; YY1; YY2; YY2; ZNF597 (directAnnotation). YY1; YY1; YY1; YY2; ZFP42 (inferredBy_Orthology).
LSM14Atransfac_pro__M01199TRIM28 (directAnnotation).
LSM14Ahdpi__ELF2ELF2 (directAnnotation).
LSM14Atfdimers__MD00038TFAP2C (directAnnotation).
LSM14Akznf__ZNF571_Imbeault2017_OM_RCADEZNF571 (directAnnotation).
LSM14Ahocomoco__TYY2_HUMAN.H11MO.0.DYY2 (directAnnotation).
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Acts as a transcription factor

check buttonThis table shows that this differential gene acts as a transcription factor.

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Acts as a drug target

check buttonThis table shows that this differential gene acts as a drug target.



1"Sun X, Zhang Y, Li H, Zhou Y, Shi S, Chen Z, He X, Zhang H, Li F, Yin J, Mou M, Wang Y, Qiu Y, Zhu F. DRESIS: the first comprehensive landscape of drug resistance information. Nucleic Acids Res. 2023 Jan 6;51(D1):D1263-D1275. doi: 10.1093/nar/gkac812. PMID: 36243960; PMCID: PMC9825618."
2"Wishart DS, Feunang YD, Guo AC, Lo EJ, Marcu A, Grant JR, Sajed T, Johnson D, Li C, Sayeeda Z, Assempour N, Iynkkaran I, Liu Y, Maciejewski A, Gale N, Wilson A, Chin L, Cummings R, Le D, Pon A, Knox C, Wilson M. DrugBank 5.0: a major update to the DrugBank database for 2018. Nucleic Acids Res. 2018 Jan 4;46(D1):D1074-D1082. doi: 10.1093/nar/gkx1037. PMID: 29126136; PMCID: PMC5753335."