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Center for Computational Systems Medicine
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Gene summary

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Datasets with differential expression of this gene

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Expression of this gene in the resistant group across all datasets and cell types

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Significant ligand-receptor pairs related to this gene (This gene does not contain this module)

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Known drug resistance mechanisms of this gene (This gene does not contain this module)

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MicroRNAs (miRNAs) regulating this gene

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Motifs and transcription factors (TFs) regulating this gene

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Acts as a transcription factor (This gene does not contain this module)

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Acts as a drug target< (This gene does not contain this module)

Gene: LIN7C

Summary for LIN7C

Gene informationGene symbol

LIN7C

Ensembl ID

ENSG00000148943

Entrez ID

55327

Gene namelin-7 homolog C, crumbs cell polarity complex component
SynonymsFLJ11215|LIN-7-C|LIN-7C|MALS-3|VELI3
Gene typeprotein_coding
UniProtAcc

Q9NUP9


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Dataset with differentially expressed gene: LIN7C

check buttonDifferentially expression genes between the resistant and sensitive groups. A positive avg_log2FC represents significantly high expression in the resistant group, while a negative avg_log2FC represents significantly low expression in the resistant group.
DatasetSourceTissueCancer type level1Cancer type level2Drug typeRegimenTimepointCell typeavg_log2FCp_val_adj

GSE168668

LNCaP cell lineCell lineProstate cancerProstate cancerTargeted therapyenzalutamideNAMalignant cells-0.2765250.00e+00

GSE175716

PDXTumor tissueLiver cancerAdvanced hepatocellular carcinomaTargeted therapysorafenibNAMalignant cells-0.2704073.10e-23

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Expression of LIN7C in the resistant group across all datasets and cell types

check buttonRed dots represent significantly high expression in the resistant group, while blue dots represent significantly low expression in the resistant group. White dots represent that there is no significant difference in the expression of this gene between the resistant and sensitive groups. Blank represents that this cell type is not present in this dataset. (If the image exists, the user can click on it to enlarge it in a new window.)
boxplot

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Significant ligand-receptor pairs related to LIN7C

check buttonThis table shows the significant ligand-receptor pairs related to this gene across all datasets, timepoints and conditions. (Complete files can be downloaded from the download section.)

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Known drug resistance mechanisms of this gene

check buttonThis table shows the known drug resistance mechanisms of this gene. Clicking on this gene will link to another database that displays more drug resistance-related information.

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MicroRNAs (miRNA) regulating LIN7C

check buttonThis table shows the miRNAs with a score of more than 80 regulating this gene. (Complete files can be downloaded from the download section.)
Gene symbolmiRNAScoreGeneBank accession
LIN7Chsa-miR-196a-1-3p84.0222NM_018362
LIN7Chsa-miR-548j-3p83.949NM_018362
LIN7Chsa-miR-548aq-3p83.949NM_018362
LIN7Chsa-miR-548ah-3p83.949NM_018362
LIN7Chsa-miR-548am-3p83.949NM_018362
LIN7Chsa-miR-548ae-3p83.949NM_018362
LIN7Chsa-miR-551b-5p83.6306NM_018362
LIN7Chsa-miR-313883.4891NM_018362
LIN7Chsa-miR-548p82.9339NM_018362
LIN7Chsa-miR-330-3p82.826NM_018362
LIN7Chsa-miR-430782.792NM_018362
LIN7Chsa-miR-4474-5p82.7911NM_018362
LIN7Chsa-miR-548t-5p82.6466NM_018362
LIN7Chsa-miR-548az-5p82.6466NM_018362
LIN7Chsa-miR-453182.5431NM_018362
LIN7Chsa-miR-452882.4341NM_018362
LIN7Chsa-miR-548d-3p81.9183NM_018362
LIN7Chsa-miR-548bb-3p81.9183NM_018362
LIN7Chsa-miR-548h-3p81.9183NM_018362
LIN7Chsa-miR-548ac81.9183NM_018362
LIN7Chsa-miR-548z81.9183NM_018362
LIN7Chsa-miR-6735-3p81.822NM_018362
LIN7Chsa-miR-426381.549NM_018362
LIN7Chsa-miR-3529-3p81.1957NM_018362
LIN7Chsa-miR-6875-3p80.9944NM_018362
LIN7Chsa-miR-6882-3p80.9466NM_018362
LIN7Chsa-miR-7110-5p80.537NM_018362
LIN7Chsa-miR-6842-5p80.537NM_018362
LIN7Chsa-miR-513c-3p80.4748NM_018362
LIN7Chsa-miR-513a-3p80.4748NM_018362
LIN7Chsa-miR-6752-5p80.2611NM_018362
LIN7Chsa-miR-442280.2094NM_018362
LIN7Chsa-miR-313380.0952NM_018362
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Motifs and transcription factors (TFs) regulating LIN7C

check buttonThis table shows the Motifs and transcription factors (TFs) regulating this gene. (Complete files can be downloaded from the download section.)
Gene symbolmotifTF_highConf
LIN7Cmetacluster_7.13ZFX (directAnnotation).
LIN7Cmetacluster_155.23BCL11B; ZNF711; ZNF711 (directAnnotation). ZFY (inferredBy_Orthology).
LIN7Cjaspar__MA0185.1DEAF1 (inferredBy_Orthology).
LIN7Ckznf__ZNF213_Schmitges2016_RCADEZNF213 (directAnnotation).
LIN7Ctaipale_tf_pairs__E2F1_HES7_RRCRCGYGYNNNNSGCGCSN_CAP_reprE2F1; HES7 (directAnnotation).
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Acts as a transcription factor

check buttonThis table shows that this differential gene acts as a transcription factor.

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Acts as a drug target

check buttonThis table shows that this differential gene acts as a drug target.



1"Sun X, Zhang Y, Li H, Zhou Y, Shi S, Chen Z, He X, Zhang H, Li F, Yin J, Mou M, Wang Y, Qiu Y, Zhu F. DRESIS: the first comprehensive landscape of drug resistance information. Nucleic Acids Res. 2023 Jan 6;51(D1):D1263-D1275. doi: 10.1093/nar/gkac812. PMID: 36243960; PMCID: PMC9825618."
2"Wishart DS, Feunang YD, Guo AC, Lo EJ, Marcu A, Grant JR, Sajed T, Johnson D, Li C, Sayeeda Z, Assempour N, Iynkkaran I, Liu Y, Maciejewski A, Gale N, Wilson A, Chin L, Cummings R, Le D, Pon A, Knox C, Wilson M. DrugBank 5.0: a major update to the DrugBank database for 2018. Nucleic Acids Res. 2018 Jan 4;46(D1):D1074-D1082. doi: 10.1093/nar/gkx1037. PMID: 29126136; PMCID: PMC5753335."