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Center for Computational Systems Medicine
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Gene summary

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Datasets with differential expression of this gene

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Expression of this gene in the resistant group across all datasets and cell types

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Significant ligand-receptor pairs related to this gene (This gene does not contain this module)

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Known drug resistance mechanisms of this gene (This gene does not contain this module)

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MicroRNAs (miRNAs) regulating this gene

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Motifs and transcription factors (TFs) regulating this gene

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Acts as a transcription factor (This gene does not contain this module)

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Acts as a drug target< (This gene does not contain this module)

Gene: LCOR

Summary for LCOR

Gene informationGene symbol

LCOR

Ensembl ID

ENSG00000196233

Entrez ID

84458

Gene nameligand dependent nuclear receptor corepressor
SynonymsC10orf12|DKFZP564P1916|FLJ13022|FLJ38026|KIAA1795|MLR2
Gene typeprotein_coding
UniProtAcc

NA


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Dataset with differentially expressed gene: LCOR

check buttonDifferentially expression genes between the resistant and sensitive groups. A positive avg_log2FC represents significantly high expression in the resistant group, while a negative avg_log2FC represents significantly low expression in the resistant group.
DatasetSourceTissueCancer type level1Cancer type level2Drug typeRegimenTimepointCell typeavg_log2FCp_val_adj

GSE164551

patientsBone marrow aspirateMultiple myelomaRefractory multiple myeloma (MM)ImmunotherapyCAR-TNAMono/Macro0.4195974.88e-19

GSE168668

LNCaP cell lineCell lineProstate cancerProstate cancerTargeted therapyenzalutamideNAMalignant cells-0.2696720.00e+00

GSE199333

patientsBone marrow aspirateAcute myeloid leukemiaPrimary FLT3-ITD-mutated acute myeloid leukemia (AML)Targeted therapygilteritinibpostMalignant cells-0.4734030.00e+00

GSE199333

patientsBone marrow aspirateAcute myeloid leukemiaPrimary FLT3-ITD-mutated acute myeloid leukemia (AML)Targeted therapygilteritinibpostNK cells-0.3265169.81e-45

GSE199333

patientsBone marrow aspirateAcute myeloid leukemiaPrimary FLT3-ITD-mutated acute myeloid leukemia (AML)Targeted therapygilteritinibpostErythrocytes-0.4615970.00e+00

GSE199333

patientsBone marrow aspirateAcute myeloid leukemiaPrimary FLT3-ITD-mutated acute myeloid leukemia (AML)Targeted therapygilteritinibpostCD8+ T cells-0.2885719.51e-34

GSE199333

patientsBone marrow aspirateAcute myeloid leukemiaPrimary FLT3-ITD-mutated acute myeloid leukemia (AML)Targeted therapygilteritinibpreMalignant cells-0.3306730.00e+00

GSE108397

451Lu cell lineCell lineMelanomaMelanomaTargeted therapyPLX-4720NAMalignant cells-0.2726270.00e+00

GSE175716

PDXTumor tissueLiver cancerAdvanced hepatocellular carcinomaTargeted therapysorafenibNAMalignant cells-0.3461214.20e-34

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Expression of LCOR in the resistant group across all datasets and cell types

check buttonRed dots represent significantly high expression in the resistant group, while blue dots represent significantly low expression in the resistant group. White dots represent that there is no significant difference in the expression of this gene between the resistant and sensitive groups. Blank represents that this cell type is not present in this dataset. (If the image exists, the user can click on it to enlarge it in a new window.)
boxplot

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Significant ligand-receptor pairs related to LCOR

check buttonThis table shows the significant ligand-receptor pairs related to this gene across all datasets, timepoints and conditions. (Complete files can be downloaded from the download section.)

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Known drug resistance mechanisms of this gene

check buttonThis table shows the known drug resistance mechanisms of this gene. Clicking on this gene will link to another database that displays more drug resistance-related information.

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MicroRNAs (miRNA) regulating LCOR

check buttonThis table shows the miRNAs with a score of more than 80 regulating this gene. (Complete files can be downloaded from the download section.)
Gene symbolmiRNAScoreGeneBank accession
LCORhsa-miR-548o-5p91.1232NM_001170765
LCORhsa-miR-548j-5p91.1232NM_001170765
LCORhsa-miR-548i91.1232NM_001170765
LCORhsa-miR-548aq-5p91.1232NM_001170765
LCORhsa-miR-548ae-5p91.1232NM_001170765
LCORhsa-miR-548y91.1232NM_001170765
LCORhsa-miR-548ay-5p91.1232NM_001170765
LCORhsa-miR-397391.0986NM_001170765
LCORhsa-miR-367191.0855NM_001170766
LCORhsa-miR-27a-3p90.9019NM_001170765
LCORhsa-miR-998590.9019NM_001170765
LCORhsa-miR-27b-3p90.9019NM_001170765
LCORhsa-miR-4735-5p90.5051NM_001170765
LCORhsa-miR-1468-3p90.4887NM_001170765
LCORhsa-miR-3692-3p90.1503NM_001170765
LCORhsa-miR-6715b-3p89.6483NM_001170765
LCORhsa-miR-216b-5p89.6251NM_001170765
LCORhsa-miR-302c-3p89.0517NM_001170765
LCORhsa-miR-302a-3p89.0517NM_001170765
LCORhsa-miR-302d-3p89.0517NM_001170765
LCORhsa-miR-302b-3p89.0517NM_001170765
LCORhsa-miR-520e-3p88.6704NM_001170765
LCORhsa-miR-520b-3p88.6704NM_001170765
LCORhsa-miR-520c-3p88.6704NM_001170765
LCORhsa-miR-185-5p88.26NM_001170766
LCORhsa-miR-464488.26NM_001170766
LCORhsa-miR-302c-5p88.1126NM_001170766
LCORhsa-miR-410-3p88.0475NM_001170765
LCORhsa-miR-500b-3p88.0259NM_001170765
LCORhsa-miR-4789-5p87.9872NM_001170765
LCORhsa-miR-196a-5p87.9372NM_001170765
LCORhsa-miR-196b-5p87.9372NM_001170765
LCORhsa-miR-2115-3p87.8708NM_001170765
LCORhsa-miR-520a-3p87.7124NM_001170765
LCORhsa-miR-520d-3p87.7124NM_001170765
LCORhsa-miR-373-3p87.7124NM_001170765
LCORhsa-miR-372-3p87.7124NM_001170765
LCORhsa-miR-612487.6137NM_001170766
LCORhsa-miR-142-3p87.2924NM_001170765
LCORhsa-miR-372-5p86.8343NM_001170765
LCORhsa-miR-1212286.7974NM_001170765
LCORhsa-miR-144-3p86.5013NM_001170765
LCORhsa-miR-447386.3961NM_001170766
LCORhsa-miR-146a-3p86.3531NM_001170765
LCORhsa-miR-5692a86.0693NM_001170765
LCORhsa-miR-10523-5p85.9732NM_001170765
LCORhsa-miR-4695-3p85.9534NM_001170765
LCORhsa-miR-10522-5p85.9196NM_001170765
LCORhsa-miR-471985.8897NM_001170765
LCORhsa-miR-6715a-3p85.8575NM_001170765
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Motifs and transcription factors (TFs) regulating LCOR

check buttonThis table shows the Motifs and transcription factors (TFs) regulating this gene. (Complete files can be downloaded from the download section.)
Gene symbolmotifTF_highConf
LCORmetacluster_7.13ZFX (directAnnotation).
LCORcisbp__M01863ZNF711 (inferredBy_Orthology).
LCORtaipale_tf_pairs__ETS2_RCCGGAAGTG_HTETS2 (directAnnotation).
LCORtransfac_pro__M05578ZFP92 (inferredBy_Orthology).
LCORmetacluster_151.2ZNF23 (directAnnotation).
LCORmetacluster_170.2KLF1; KLF10; KLF10; KLF11; KLF11; KLF11; KLF12; KLF12; KLF14; KLF15; KLF17; KLF2; KLF5; KLF7; KLF7; KLF8; MAZ; MAZ; PATZ1; SP1; SP1; SP1; SP2; SP2; SP2; SP2; SP2; SP2; SP2; SP2; SP4; SP4; SP5; SP6; SP7; SP8; SP9; ZNF281 (directAnnotation). E2F1; E2F4; KLF10; KLF13; KLF14; KLF17; KLF2; KLF7; SP1; SP1; SP3; SP4; SP5; SP6; SP7 (inferredBy_Orthology).
LCORtransfac_pro__M05479ZNF580 (directAnnotation).
LCORmetacluster_155.23BCL11B; ZNF711; ZNF711 (directAnnotation). ZFY (inferredBy_Orthology).
LCORkznf__ZNF783_Imbeault2017_OM_MEMEZNF783 (directAnnotation).
LCORmetacluster_144.3ZNF704; ZNF704 (directAnnotation).
LCORjaspar__MA0748.2YY2 (directAnnotation).
LCORhomer__TWVGGTCCGC_HINFPHINFP (directAnnotation).
LCORmetacluster_135.10MBD2; MBD2; MECP2; MECP2 (directAnnotation).
LCORtaipale_tf_pairs__GCM1_SPDEF_RTRSKGGCGGANNNNNNATCCNNN_CAP_reprGCM1; SPDEF (directAnnotation).
LCORjaspar__MA0079.5SP1 (directAnnotation).
LCORtaipale_tf_pairs__GCM1_ETV1_RTRNNGGCGGAAGTN_CAPETV1; GCM1 (directAnnotation).
LCORtaipale_tf_pairs__TFAP2C_E2F8_NNTCCCGCNNNCCNNNGGC_CAP_reprE2F8; TFAP2C (directAnnotation).
LCORdbtfbs__ZBTB8A_HEK293_ENCSR481FEC_merged_N1ZBTB8A (directAnnotation).
LCORswissregulon__hs__CHD1CHD1 (directAnnotation).
LCORtaipale_cyt_meth__ZNF460_NRMCGCCCCCCGN_eDBD_methZNF460 (directAnnotation).
LCORkznf__ZNF846_Imbeault2017_RP_ChIP-seqZNF846 (directAnnotation).
LCORtransfac_pro__M12686ZBTB10 (directAnnotation).
LCORtaipale_cyt_meth__E2F2_NCGCGCGCGCM_eDBD_methE2F2 (directAnnotation).
LCORmetacluster_143.14ZNF320 (directAnnotation).
LCORkznf__ZNF383_Imbeault2017_RP_RCADEZNF383 (directAnnotation).
LCORdbtfbs__ZBTB10_HEK293_ENCSR004PLU_merged_N1ZBTB10 (directAnnotation).
LCORmetacluster_144.8ZNF30; ZNF30 (directAnnotation).
LCORtaipale_cyt_meth__ZBTB37_NYACCGCRNNYACCGYR_eDBD_meth_reprZBTB37 (directAnnotation).
LCORmetacluster_23.9GLIS1; GLIS3; GLIS3; ZNF575 (directAnnotation). GLIS2; GLIS2; GLIS3; ZNF575; ZXDA; ZXDA; ZXDA; ZXDA; ZXDB; ZXDB; ZXDB; ZXDB; ZXDC; ZXDC; ZXDC; ZXDC (inferredBy_Orthology).
LCORmetacluster_61.1DEAF1; DEAF1 (directAnnotation).
LCORkznf__ZNF548_Imbeault2017_RP_RCADEZNF548 (directAnnotation).
LCORkznf__ZNF141_Imbeault2017_RP_RCADEZNF141 (directAnnotation).
LCORtransfac_pro__M04617ZBTB7A (directAnnotation).
LCORtransfac_pro__M01973PLAG1 (directAnnotation).
LCORmetacluster_151.1KAT7; PML; SMAD5; TAF1; ZFP37; ZGPAT; ZNF519; ZNF519; ZNF571; ZNF770; ZNF770; ZNF770; ZSCAN22; ZSCAN22 (directAnnotation).
LCORtaipale_tf_pairs__TFAP2C_HES7_NNCRCGYGNNNNNNSCCNNNGGS_CAP_reprHES7; TFAP2C (directAnnotation).
LCORmetacluster_66.1MTF1; ZNF320; ZNF320; ZNF320; ZNF782 (directAnnotation).
LCORcisbp__M01864EGR1 (inferredBy_Orthology).
LCORtfdimers__MD00391KLF4 (directAnnotation).
LCORkznf__ZNF267_Imbeault2017_RP_RCADEZNF267 (directAnnotation).
LCORtfdimers__MD00151CHURC1 (directAnnotation).
LCORtransfac_pro__M04817ZBTB33 (directAnnotation).
LCORcisbp__M00139ZNF281 (inferredBy_Orthology).
LCORtaipale_tf_pairs__TFAP2C_HES7_NNCRCGYGNNNNNNNSCCNNNGGS_CAP_reprHES7; TFAP2C (directAnnotation).
LCORmetacluster_144.5ZNF610; ZNF610; ZNF610 (directAnnotation).
LCORtransfac_public__M00491PATZ1 (directAnnotation).
LCORtaipale_tf_pairs__GCM1_SPDEF_RTGNKGGCGGAWG_CAP_reprGCM1; SPDEF (directAnnotation).
LCORmetacluster_3.10KLF2; KLF4 (directAnnotation).
LCORjaspar__MA1122.1TFDP1 (directAnnotation).
LCORkznf__ZNF90_Imbeault2017_OM_RCADEZNF90 (directAnnotation).
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Acts as a transcription factor

check buttonThis table shows that this differential gene acts as a transcription factor.

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Acts as a drug target

check buttonThis table shows that this differential gene acts as a drug target.



1"Sun X, Zhang Y, Li H, Zhou Y, Shi S, Chen Z, He X, Zhang H, Li F, Yin J, Mou M, Wang Y, Qiu Y, Zhu F. DRESIS: the first comprehensive landscape of drug resistance information. Nucleic Acids Res. 2023 Jan 6;51(D1):D1263-D1275. doi: 10.1093/nar/gkac812. PMID: 36243960; PMCID: PMC9825618."
2"Wishart DS, Feunang YD, Guo AC, Lo EJ, Marcu A, Grant JR, Sajed T, Johnson D, Li C, Sayeeda Z, Assempour N, Iynkkaran I, Liu Y, Maciejewski A, Gale N, Wilson A, Chin L, Cummings R, Le D, Pon A, Knox C, Wilson M. DrugBank 5.0: a major update to the DrugBank database for 2018. Nucleic Acids Res. 2018 Jan 4;46(D1):D1074-D1082. doi: 10.1093/nar/gkx1037. PMID: 29126136; PMCID: PMC5753335."