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Center for Computational Systems Medicine
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Gene summary

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Datasets with differential expression of this gene

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Expression of this gene in the resistant group across all datasets and cell types

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Significant ligand-receptor pairs related to this gene (This gene does not contain this module)

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Known drug resistance mechanisms of this gene (This gene does not contain this module)

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MicroRNAs (miRNAs) regulating this gene

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Motifs and transcription factors (TFs) regulating this gene

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Acts as a transcription factor (This gene does not contain this module)

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Acts as a drug target< (This gene does not contain this module)

Gene: GOPC

Summary for GOPC

Gene informationGene symbol

GOPC

Ensembl ID

ENSG00000047932

Entrez ID

57120

Gene namegolgi associated PDZ and coiled-coil motif containing
SynonymsCAL|dJ94G16.2|FIG|GOPC1|PIST
Gene typeprotein_coding
UniProtAcc

Q9HD26


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Dataset with differentially expressed gene: GOPC

check buttonDifferentially expression genes between the resistant and sensitive groups. A positive avg_log2FC represents significantly high expression in the resistant group, while a negative avg_log2FC represents significantly low expression in the resistant group.
DatasetSourceTissueCancer type level1Cancer type level2Drug typeRegimenTimepointCell typeavg_log2FCp_val_adj

GSE163836

FCIBC02 cell lineCell lineBreast cancerInflammatory breast cancerChemotherapypaclitaxelNAMalignant cells-0.3065850.00e+00

GSE153697

patientsBone marrow aspirateAcute lymphoblastic leukemiaRelapsed B-cell acute lymphoblastic leukemia (B-ALL)Immunotherapyanti-CD19 CAR-TNAMalignant cells0.2978731.01e-20

GSE115251

Kelly cell lineCell lineNeuroblastomaNeuroblastomaTargeted therapyTAE684NAMalignant cells0.319280.00e+00

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Expression of GOPC in the resistant group across all datasets and cell types

check buttonRed dots represent significantly high expression in the resistant group, while blue dots represent significantly low expression in the resistant group. White dots represent that there is no significant difference in the expression of this gene between the resistant and sensitive groups. Blank represents that this cell type is not present in this dataset. (If the image exists, the user can click on it to enlarge it in a new window.)
boxplot

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Significant ligand-receptor pairs related to GOPC

check buttonThis table shows the significant ligand-receptor pairs related to this gene across all datasets, timepoints and conditions. (Complete files can be downloaded from the download section.)

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Known drug resistance mechanisms of this gene

check buttonThis table shows the known drug resistance mechanisms of this gene. Clicking on this gene will link to another database that displays more drug resistance-related information.

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MicroRNAs (miRNA) regulating GOPC

check buttonThis table shows the miRNAs with a score of more than 80 regulating this gene. (Complete files can be downloaded from the download section.)
Gene symbolmiRNAScoreGeneBank accession
GOPChsa-miR-1277-5p87.4612NM_001017408
GOPChsa-miR-442987.4449NM_020399
GOPChsa-miR-320d87.4449NM_020399
GOPChsa-miR-320b87.4449NM_020399
GOPChsa-miR-320a-3p87.4449NM_020399
GOPChsa-miR-320c87.4449NM_020399
GOPChsa-miR-3124-3p87.4352NM_020399
GOPChsa-miR-491-3p87.3847NM_020399
GOPChsa-miR-551b-5p87.2791NM_001017408
GOPChsa-miR-548p87.1688NM_020399
GOPChsa-miR-990286.4072NM_020399
GOPChsa-miR-4786-3p85.7667NM_001017408
GOPChsa-miR-211-3p85.7251NM_020399
GOPChsa-miR-446385.2852NM_020399
GOPChsa-miR-10524-5p85.1677NM_020399
GOPChsa-miR-576-5p84.5234NM_001017408
GOPChsa-miR-426384.5234NM_001017408
GOPChsa-miR-570-3p84.1062NM_020399
GOPChsa-miR-426183.024NM_020399
GOPChsa-miR-5699-5p82.6591NM_020399
GOPChsa-miR-93582.4923NM_020399
GOPChsa-miR-1910-5p82.2538NM_020399
GOPChsa-miR-469882.0448NM_020399
GOPChsa-miR-33a-3p81.843NM_020399
GOPChsa-miR-1212781.8177NM_020399
GOPChsa-miR-651-3p81.3759NM_001017408
GOPChsa-miR-123181.1483NM_020399
GOPChsa-miR-6830-5p80.9251NM_001017408
GOPChsa-miR-335-5p80.6114NM_001017408
GOPChsa-miR-313380.3759NM_001017408
GOPChsa-miR-464380.1298NM_001017408
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Motifs and transcription factors (TFs) regulating GOPC

check buttonThis table shows the Motifs and transcription factors (TFs) regulating this gene. (Complete files can be downloaded from the download section.)
Gene symbolmotifTF_highConf
GOPCtaipale_tf_pairs__E2F1_HES7_RRCRCGYGYNNNNSGCGCSN_CAP_reprE2F1; HES7 (directAnnotation).
GOPCtaipale_tf_pairs__ETV5_HES7_NNCACGTGNNNNCCGGAANN_CAPETV5; HES7 (directAnnotation).
GOPCkznf__ZFP57_Imbeault2017_RP_ChIP-seqZFP57 (directAnnotation).
GOPCmetacluster_195.2EGR2; KLF10; KLF10; KLF11; KLF11; KLF11; KLF13; KLF13; KLF13; KLF13; KLF13; KLF14; KLF14; KLF14; KLF14; KLF14; KLF15; KLF15; KLF16; KLF3; KLF8; KLF9; KLF9; KLF9; SP1; SP1; SP1; SP3; SP3; SP4; SP8; SP8; SP8; SP9; SP9 (directAnnotation). EGR1; KLF1; KLF12; KLF13; KLF14; KLF14; KLF14; KLF14; KLF14; KLF14; KLF16; KLF17; KLF17; KLF17; KLF17; KLF18; KLF18; KLF18; KLF18; KLF18; KLF18; KLF2; KLF2; KLF2; KLF3; KLF4; KLF5; KLF5; KLF5; KLF6; KLF7; KLF7; KLF8; KLF9; SP1; SP3; SP4; SP4; SP5; SP5; SP5; SP6; SP7; SP8; SP9 (inferredBy_Orthology).
GOPCmetacluster_67.2ZNF501 (directAnnotation). ACAA1; E2F2; E2F2; E2F3; E2F3; FOXN4 (inferredBy_Orthology).
GOPCcisbp__M07938E2F1 (directAnnotation).
GOPCmetacluster_197.2E2F4; E2F7; E2F7; E2F7; E2F8; E2F8 (directAnnotation).
GOPCtransfac_pro__M04748GABPA (directAnnotation).
GOPChdpi__TP73TP73 (directAnnotation).
GOPCjaspar__MA0776.1MYBL1 (directAnnotation).
GOPCmetacluster_55.3E2F6; EGR1; NRF1; NRF1; NRF1; NRF1; NRF1; NRF1; NRF1; NRF1; NRF1; NRF1; ZBTB2; ZSCAN10 (directAnnotation). NFE2L1; NRF1; NRF1; NRF1 (inferredBy_Orthology).
GOPCtransfac_pro__M04950EGR1 (directAnnotation).
GOPCtransfac_pro__M00652NRF1 (directAnnotation).
GOPCmetacluster_55.5ZNF541 (directAnnotation).
GOPCmetacluster_34.3EGR1; ETS1; SETDB1; SIX5; SIX5; ZNF143; ZNF76 (directAnnotation).
GOPCdbtfbs__GMEB1_K562_ENCSR928KOR_merged_N1GMEB1 (directAnnotation).
GOPCmetacluster_166.2ELK4; ETS1; ETS1; ETV1; ETV3; ETV4; ETV5; ETV7 (directAnnotation). GABPA (inferredBy_Orthology).
GOPCtaipale_tf_pairs__GCM1_ETV4_RTGCGGGCGGAAGTR_CAPETV4; GCM1 (directAnnotation).
GOPCtaipale_tf_pairs__HOXB2_ELK3_RSCGGAAGTMRTTA_CAPELK3; HOXB2 (directAnnotation).
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Acts as a transcription factor

check buttonThis table shows that this differential gene acts as a transcription factor.

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Acts as a drug target

check buttonThis table shows that this differential gene acts as a drug target.



1"Sun X, Zhang Y, Li H, Zhou Y, Shi S, Chen Z, He X, Zhang H, Li F, Yin J, Mou M, Wang Y, Qiu Y, Zhu F. DRESIS: the first comprehensive landscape of drug resistance information. Nucleic Acids Res. 2023 Jan 6;51(D1):D1263-D1275. doi: 10.1093/nar/gkac812. PMID: 36243960; PMCID: PMC9825618."
2"Wishart DS, Feunang YD, Guo AC, Lo EJ, Marcu A, Grant JR, Sajed T, Johnson D, Li C, Sayeeda Z, Assempour N, Iynkkaran I, Liu Y, Maciejewski A, Gale N, Wilson A, Chin L, Cummings R, Le D, Pon A, Knox C, Wilson M. DrugBank 5.0: a major update to the DrugBank database for 2018. Nucleic Acids Res. 2018 Jan 4;46(D1):D1074-D1082. doi: 10.1093/nar/gkx1037. PMID: 29126136; PMCID: PMC5753335."