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Center for Computational Systems Medicine
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Gene summary

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Datasets with differential expression of this gene

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Expression of this gene in the resistant group across all datasets and cell types

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Significant ligand-receptor pairs related to this gene (This gene does not contain this module)

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Known drug resistance mechanisms of this gene (This gene does not contain this module)

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MicroRNAs (miRNAs) regulating this gene

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Motifs and transcription factors (TFs) regulating this gene

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Acts as a transcription factor (This gene does not contain this module)

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Acts as a drug target< (This gene does not contain this module)

Gene: FRMD4B

Summary for FRMD4B

Gene informationGene symbol

FRMD4B

Ensembl ID

ENSG00000114541

Entrez ID

23150

Gene nameFERM domain containing 4B
SynonymsGRSP1|KIAA1013
Gene typeprotein_coding
UniProtAcc

Q9Y2L6


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Dataset with differentially expressed gene: FRMD4B

check buttonDifferentially expression genes between the resistant and sensitive groups. A positive avg_log2FC represents significantly high expression in the resistant group, while a negative avg_log2FC represents significantly low expression in the resistant group.
DatasetSourceTissueCancer type level1Cancer type level2Drug typeRegimenTimepointCell typeavg_log2FCp_val_adj

GSE153697

patientsBone marrow aspirateAcute lymphoblastic leukemiaRelapsed B-cell acute lymphoblastic leukemia (B-ALL)Immunotherapyanti-CD19 CAR-TNAMalignant cells-0.2734896.57e-09

PMID34715028

patientsTumor tissueKidney cancerClear cell renal cell carcinoma (ccRCC)ImmunotherapynivolumabpostCD4+ T cells-0.3529564.45e-34

GSE108397

451Lu cell lineCell lineMelanomaMelanomaTargeted therapyPLX-4720NAMalignant cells-0.9734060.00e+00

GSE175716

PDXTumor tissueLiver cancerAdvanced hepatocellular carcinomaTargeted therapysorafenibNAMalignant cells-1.015742.73e-33

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Expression of FRMD4B in the resistant group across all datasets and cell types

check buttonRed dots represent significantly high expression in the resistant group, while blue dots represent significantly low expression in the resistant group. White dots represent that there is no significant difference in the expression of this gene between the resistant and sensitive groups. Blank represents that this cell type is not present in this dataset. (If the image exists, the user can click on it to enlarge it in a new window.)
boxplot

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Significant ligand-receptor pairs related to FRMD4B

check buttonThis table shows the significant ligand-receptor pairs related to this gene across all datasets, timepoints and conditions. (Complete files can be downloaded from the download section.)

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Known drug resistance mechanisms of this gene

check buttonThis table shows the known drug resistance mechanisms of this gene. Clicking on this gene will link to another database that displays more drug resistance-related information.

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MicroRNAs (miRNA) regulating FRMD4B

check buttonThis table shows the miRNAs with a score of more than 80 regulating this gene. (Complete files can be downloaded from the download section.)
Gene symbolmiRNAScoreGeneBank accession
FRMD4Bhsa-miR-196a-5p84.7252NM_015123
FRMD4Bhsa-miR-95-5p84.7091NM_015123
FRMD4Bhsa-miR-1213684.4439NM_015123
FRMD4Bhsa-miR-335-3p84.3312NM_015123
FRMD4Bhsa-miR-192-5p83.6456NM_015123
FRMD4Bhsa-miR-215-5p83.6456NM_015123
FRMD4Bhsa-miR-569183.6412NM_015123
FRMD4Bhsa-miR-5196-3p82.9562NM_015123
FRMD4Bhsa-miR-1211582.8545NM_015123
FRMD4Bhsa-miR-186-5p82.6292NM_015123
FRMD4Bhsa-miR-6796-5p82.5424NM_015123
FRMD4Bhsa-miR-42982.0042NM_015123
FRMD4Bhsa-miR-451781.4764NM_015123
FRMD4Bhsa-miR-7-1-3p80.6432NM_015123
FRMD4Bhsa-miR-7-2-3p80.6432NM_015123
FRMD4Bhsa-miR-515-5p80.3005NM_015123
FRMD4Bhsa-miR-519e-5p80.3005NM_015123
FRMD4Bhsa-miR-3663-3p80.059NM_015123
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Motifs and transcription factors (TFs) regulating FRMD4B

check buttonThis table shows the Motifs and transcription factors (TFs) regulating this gene. (Complete files can be downloaded from the download section.)
Gene symbolmotifTF_highConf
FRMD4Bmetacluster_135.10MBD2; MBD2; MECP2; MECP2 (directAnnotation).
FRMD4Btaipale_cyt_meth__CREB1_NRTGACGTN_eDBD_reprCREB1 (directAnnotation).
FRMD4Bkznf__ZNF730_Imbeault2017_RP_RCADEZNF730 (directAnnotation).
FRMD4Bcisbp__M00968MTF2 (directAnnotation).
FRMD4Bmetacluster_135.11NR2C2 (directAnnotation).
FRMD4Bmetacluster_160.20JUND; PRDM15 (directAnnotation).
FRMD4Bmetacluster_198.3ZFP64 (directAnnotation).
FRMD4Bmetacluster_61.1DEAF1; DEAF1 (directAnnotation).
FRMD4Bmetacluster_175.1ZNF283 (directAnnotation).
FRMD4Btransfac_pro__M01861ATF1 (directAnnotation).
FRMD4Bdbtfbs__GMEB2_HepG2_ENCSR745VSQ_merged_N1GMEB2 (directAnnotation).
FRMD4Bmetacluster_111.5E4F1; E4F1 (directAnnotation).
FRMD4Btransfac_pro__M04817ZBTB33 (directAnnotation).
FRMD4Btransfac_pro__M05402BCL6B (directAnnotation).
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Acts as a transcription factor

check buttonThis table shows that this differential gene acts as a transcription factor.

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Acts as a drug target

check buttonThis table shows that this differential gene acts as a drug target.



1"Sun X, Zhang Y, Li H, Zhou Y, Shi S, Chen Z, He X, Zhang H, Li F, Yin J, Mou M, Wang Y, Qiu Y, Zhu F. DRESIS: the first comprehensive landscape of drug resistance information. Nucleic Acids Res. 2023 Jan 6;51(D1):D1263-D1275. doi: 10.1093/nar/gkac812. PMID: 36243960; PMCID: PMC9825618."
2"Wishart DS, Feunang YD, Guo AC, Lo EJ, Marcu A, Grant JR, Sajed T, Johnson D, Li C, Sayeeda Z, Assempour N, Iynkkaran I, Liu Y, Maciejewski A, Gale N, Wilson A, Chin L, Cummings R, Le D, Pon A, Knox C, Wilson M. DrugBank 5.0: a major update to the DrugBank database for 2018. Nucleic Acids Res. 2018 Jan 4;46(D1):D1074-D1082. doi: 10.1093/nar/gkx1037. PMID: 29126136; PMCID: PMC5753335."