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Center for Computational Systems Medicine
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Gene summary

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Datasets with differential expression of this gene

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Expression of this gene in the resistant group across all datasets and cell types

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Significant ligand-receptor pairs related to this gene (This gene does not contain this module)

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Known drug resistance mechanisms of this gene

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MicroRNAs (miRNAs) regulating this gene

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Motifs and transcription factors (TFs) regulating this gene

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Acts as a transcription factor

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Acts as a drug target< (This gene does not contain this module)

Gene: FOXO3

Summary for FOXO3

Gene informationGene symbol

FOXO3

Ensembl ID

ENSG00000118689

Entrez ID

2309

Gene nameforkhead box O3
SynonymsAF6q21|FKHRL1|FOXO2|FOXO3A
Gene typeprotein_coding
UniProtAcc

O43524


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Dataset with differentially expressed gene: FOXO3

check buttonDifferentially expression genes between the resistant and sensitive groups. A positive avg_log2FC represents significantly high expression in the resistant group, while a negative avg_log2FC represents significantly low expression in the resistant group.
DatasetSourceTissueCancer type level1Cancer type level2Drug typeRegimenTimepointCell typeavg_log2FCp_val_adj

GSE186960

Panc1 cell lineCell linePancreatic cancerPancreatic ductal adenocarcinoma (PDAC)ChemotherapygemcitabineNAMalignant cells0.5710770.00e+00

GSE164551

patientsBone marrow aspirateMultiple myelomaRefractory multiple myeloma (MM)ImmunotherapyCAR-TNAMono/Macro-0.469862.29e-29

GSE207422_Tor

patientsTumor tissueLung cancerEGFR/ALK mutation negative non-small cell lung cancer (NSCLC)Immunotherapytoripalimab + carboplatin + (docetaxel or pemetrexed or emcitabine)postNeutrophils-0.3397541.11e-09

GSE189460

patientsBone marrow aspirateMultiple myelomaMultiple myeloma (MM)Targeted therapybortezomib + melphalan + prednisoloneprepDCs0.5796314.27e-02

GSE161801_PI

patientsBone marrow aspirateMultiple myelomaRefractory multiple myeloma (MM)Targeted therapycarfilzomib + dexamethasonepostMalignant cells0.3283551.85e-08

GSE199333

patientsBone marrow aspirateAcute myeloid leukemiaPrimary FLT3-ITD-mutated acute myeloid leukemia (AML)Targeted therapygilteritinibpostMalignant cells-0.7186510.00e+00

GSE131984_JQ1Pal

SUM159 cell lineCell lineBreast cancerTriple-negative breast cancer (TNBC)Targeted therapyJQ1 + palbociclibNAMalignant cells0.3097813.53e-18

GSE131984_Pal

SUM159 cell lineCell lineBreast cancerTriple-negative breast cancer (TNBC)Targeted therapypalbociclibNAMalignant cells0.2992384.73e-12

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Expression of FOXO3 in the resistant group across all datasets and cell types

check buttonRed dots represent significantly high expression in the resistant group, while blue dots represent significantly low expression in the resistant group. White dots represent that there is no significant difference in the expression of this gene between the resistant and sensitive groups. Blank represents that this cell type is not present in this dataset. (If the image exists, the user can click on it to enlarge it in a new window.)
boxplot

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Significant ligand-receptor pairs related to FOXO3

check buttonThis table shows the significant ligand-receptor pairs related to this gene across all datasets, timepoints and conditions. (Complete files can be downloaded from the download section.)

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Known drug resistance mechanisms of this gene

check buttonThis table shows the known drug resistance mechanisms of this gene. Clicking on this gene will link to another database that displays more drug resistance-related information.
Gene symbolMechanism

FOXO3

Epigenetic Alteration of DNA, RNA or Protein

FOXO3

Unusual Activation of Pro-survival Pathway
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MicroRNAs (miRNA) regulating FOXO3

check buttonThis table shows the miRNAs with a score of more than 80 regulating this gene. (Complete files can be downloaded from the download section.)
Gene symbolmiRNAScoreGeneBank accession
FOXO3hsa-miR-212-3p83.653NM_001455
FOXO3hsa-miR-132-3p83.653NM_001455
FOXO3hsa-miR-1537-5p83.4429NM_001455
FOXO3hsa-miR-568983.3685NM_001455
FOXO3hsa-miR-6805-3p83.2404NM_001455
FOXO3hsa-miR-569183.2404NM_001455
FOXO3hsa-miR-6830-5p82.4046NM_001455
FOXO3hsa-miR-494-3p82.3578NM_001455
FOXO3hsa-miR-223-3p82.2549NM_001455
FOXO3hsa-miR-3692-5p82.1176NM_001455
FOXO3hsa-miR-52781.9944NM_001455
FOXO3hsa-miR-518a-5p81.9944NM_001455
FOXO3hsa-miR-467381.8198NM_001455
FOXO3hsa-miR-4645-5p81.8198NM_001455
FOXO3hsa-miR-453181.2538NM_001455
FOXO3hsa-miR-153-3p80.8885NM_001455
FOXO3hsa-let-7f-2-3p80.2524NM_001455
FOXO3hsa-miR-1185-1-3p80.1947NM_001455
FOXO3hsa-miR-1185-2-3p80.1947NM_001455
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Motifs and transcription factors (TFs) regulating FOXO3

check buttonThis table shows the Motifs and transcription factors (TFs) regulating this gene. (Complete files can be downloaded from the download section.)
Gene symbolmotifTF_highConf
FOXO3transfac_pro__M05538ZNF536 (inferredBy_Orthology).
FOXO3kznf__ZNF384_Schmitges2016_RCADEZNF384 (directAnnotation).
FOXO3taipale_tf_pairs__TEAD4_ERG_RSCGGAAATRCC_CAPERG; TEAD4 (directAnnotation).
FOXO3taipale_tf_pairs__HOXD12_ETV1_RSCGGAAGTAATAAAN_CAPETV1; HOXD12 (directAnnotation).
FOXO3taipale_tf_pairs__GCM1_ELK1_RTGCGGGCGGAAGTN_CAP_2ELK1; GCM1 (directAnnotation).
FOXO3transfac_pro__M05804ZBTB41 (inferredBy_Orthology).
FOXO3metacluster_196.7POLR3A (directAnnotation).
FOXO3transfac_pro__M06516ZNF418 (directAnnotation).
FOXO3transfac_pro__M04844MAX (directAnnotation).
FOXO3metacluster_22.18BACH2 (inferredBy_Orthology).
FOXO3metacluster_22.37BACH1 (directAnnotation).
FOXO3cisbp__M01815CEBPE (inferredBy_Orthology).
FOXO3kznf__ZNF571_Imbeault2017_OM_RCADEZNF571 (directAnnotation).
FOXO3transfac_pro__M01253CNOT3 (directAnnotation).
FOXO3metacluster_137.2ATF3; BACH2; BATF; BATF; BATF; BATF; BATF3; FOS; FOS; FOS; FOS; FOS; FOS; FOS; FOS; FOS; FOS; FOSB; FOSB; FOSB; FOSB; FOSB; FOSL1; FOSL1; FOSL1; FOSL1; FOSL1; FOSL2; FOSL2; FOSL2; FOSL2; FOSL2; FOSL2; FOSL2; INSM2; JUN; JUN; JUN; JUN; JUN; JUN; JUN; JUN; JUN; JUN; JUN; JUN; JUNB; JUNB; JUNB; JUNB; JUNB; JUND; JUND; JUND; JUND; JUND; SMARCC1 (directAnnotation). ATF3; ATF3; BATF; FOS; FOSB; FOSL1; FOSL1; FOSL2; FOSL2; FOSL2; JUN; JUN; JUN; JUN; JUN; JUN; JUN; JUNB; JUND; JUND; JUND; JUND (inferredBy_Orthology).
FOXO3transfac_pro__M02089E2F3 (directAnnotation).
FOXO3transfac_pro__M00803E2F1; E2F3; E2F4; TFDP1 (directAnnotation).
FOXO3transfac_pro__M04916TAF1 (directAnnotation).
FOXO3transfac_pro__M06408ZSCAN30 (directAnnotation).
FOXO3metacluster_144.8ZNF30; ZNF30 (directAnnotation).
FOXO3metacluster_7.13ZFX (directAnnotation).
FOXO3metacluster_144.3ZNF704; ZNF704 (directAnnotation).
FOXO3tfdimers__MD00154MZF1; SREBF1 (directAnnotation).
FOXO3kznf__ZNF730_Imbeault2017_RP_RCADEZNF730 (directAnnotation).
FOXO3transfac_pro__M01219SP1 (directAnnotation). SP3 (inferredBy_Orthology).
FOXO3metacluster_155.23BCL11B; ZNF711; ZNF711 (directAnnotation). ZFY (inferredBy_Orthology).
FOXO3cisbp__M01863ZNF711 (inferredBy_Orthology).
FOXO3homer__GGCGGGAARN_E2F6E2F6 (directAnnotation).
FOXO3kznf__ZFP57_Imbeault2017_RP_ChIP-seqZFP57 (directAnnotation).
FOXO3kznf__ZNF100_Imbeault2017_RP_RCADEZNF100 (directAnnotation).
FOXO3jaspar__MA1721.1ZNF93 (directAnnotation).
FOXO3metacluster_151.2ZNF23 (directAnnotation).
FOXO3metacluster_151.1KAT7; PML; SMAD5; TAF1; ZFP37; ZGPAT; ZNF519; ZNF519; ZNF571; ZNF770; ZNF770; ZNF770; ZSCAN22; ZSCAN22 (directAnnotation).
FOXO3kznf__ZNF548_Imbeault2017_RP_RCADEZNF548 (directAnnotation).
FOXO3dbtfbs__ZBTB8A_HEK293_ENCSR481FEC_merged_N1ZBTB8A (directAnnotation).
FOXO3transfac_pro__M01199TRIM28 (directAnnotation).
FOXO3metacluster_133.1ZNF304; ZNF304; ZSCAN22 (directAnnotation).
FOXO3dbtfbs__ZSCAN30_HEK293_ENCSR768VNZ_merged_N1ZSCAN30 (directAnnotation).
FOXO3flyfactorsurvey__Mad_FlyReg_FBgn0011648SMAD9 (inferredBy_Orthology).
FOXO3metacluster_144.5ZNF610; ZNF610; ZNF610 (directAnnotation).
FOXO3taipale_tf_pairs__TFAP2C_E2F8_NNTCCCGCNNNCCNNNGGC_CAP_reprE2F8; TFAP2C (directAnnotation).
FOXO3cisbp__M00968MTF2 (directAnnotation).
FOXO3kznf__ZNF783_Imbeault2017_OM_MEMEZNF783 (directAnnotation).
FOXO3swissregulon__hs__CHD1CHD1 (directAnnotation).
FOXO3kznf__ZNF383_Imbeault2017_OM_RCADEZNF383 (directAnnotation).
FOXO3kznf__ZNF90_Imbeault2017_OM_RCADEZNF90 (directAnnotation).
FOXO3metacluster_135.10MBD2; MBD2; MECP2; MECP2 (directAnnotation).
FOXO3kznf__ZNF311_Imbeault2017_OM_MEMEZNF311 (directAnnotation).
FOXO3transfac_pro__M07310SP5 (directAnnotation).
FOXO3jaspar__MA0535.1SMAD9 (inferredBy_Orthology).
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Acts as a transcription factor

check buttonThis table shows that this differential gene acts as a transcription factor.
TFmotifExpressionCell typeDatasetTimepoint
FOXO3metacluster_127.2upMalignant cells

GSE131984_Pal

NA
FOXO3metacluster_134.3upMalignant cells

GSE131984_Pal

NA
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Acts as a drug target

check buttonThis table shows that this differential gene acts as a drug target.



1"Sun X, Zhang Y, Li H, Zhou Y, Shi S, Chen Z, He X, Zhang H, Li F, Yin J, Mou M, Wang Y, Qiu Y, Zhu F. DRESIS: the first comprehensive landscape of drug resistance information. Nucleic Acids Res. 2023 Jan 6;51(D1):D1263-D1275. doi: 10.1093/nar/gkac812. PMID: 36243960; PMCID: PMC9825618."
2"Wishart DS, Feunang YD, Guo AC, Lo EJ, Marcu A, Grant JR, Sajed T, Johnson D, Li C, Sayeeda Z, Assempour N, Iynkkaran I, Liu Y, Maciejewski A, Gale N, Wilson A, Chin L, Cummings R, Le D, Pon A, Knox C, Wilson M. DrugBank 5.0: a major update to the DrugBank database for 2018. Nucleic Acids Res. 2018 Jan 4;46(D1):D1074-D1082. doi: 10.1093/nar/gkx1037. PMID: 29126136; PMCID: PMC5753335."

1MicroRNA-25 contributes to cisplatin resistance in gastric cancer cells by inhibiting forkhead box O3a
2MicroRNA-155 increases colon cancer chemoresistance to cisplatin by targeting forkhead box O3
3miR-153 supports colorectal cancer progression via pleiotropic effects that enhance invasion and chemotherapeutic resistance
4MicroRNA-223-3p regulates cell chemo-sensitivity by targeting FOXO3 in prostatic cancer
5circRNA_0025202 Regulates Tamoxifen Sensitivity and Tumor Progression via Regulating the miR-182-5p/FOXO3a Axis in Breast Cancer