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Center for Computational Systems Medicine
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Gene summary

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Datasets with differential expression of this gene

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Expression of this gene in the resistant group across all datasets and cell types

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Significant ligand-receptor pairs related to this gene (This gene does not contain this module)

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Known drug resistance mechanisms of this gene (This gene does not contain this module)

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MicroRNAs (miRNAs) regulating this gene

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Motifs and transcription factors (TFs) regulating this gene

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Acts as a transcription factor (This gene does not contain this module)

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Acts as a drug target< (This gene does not contain this module)

Gene: BRWD1

Summary for BRWD1

Gene informationGene symbol

BRWD1

Ensembl ID

ENSG00000185658

Entrez ID

54014

Gene namebromodomain and WD repeat domain containing 1
SynonymsC21orf107|DCAF19|FLJ11315|N143|WDR9
Gene typeprotein_coding
UniProtAcc

Q9NSI6


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Dataset with differentially expressed gene: BRWD1

check buttonDifferentially expression genes between the resistant and sensitive groups. A positive avg_log2FC represents significantly high expression in the resistant group, while a negative avg_log2FC represents significantly low expression in the resistant group.
DatasetSourceTissueCancer type level1Cancer type level2Drug typeRegimenTimepointCell typeavg_log2FCp_val_adj

GSE169246_PacAteTissue

patientsTumor tissueBreast cancerAdvanced triple-negative breast cancer (TNBC)Immunotherapyatezolizumab + paclitaxelpostB cells-0.3939181.07e-16

GSE108397

451Lu cell lineCell lineMelanomaMelanomaTargeted therapyPLX-4720NAMalignant cells-0.3441880.00e+00

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Expression of BRWD1 in the resistant group across all datasets and cell types

check buttonRed dots represent significantly high expression in the resistant group, while blue dots represent significantly low expression in the resistant group. White dots represent that there is no significant difference in the expression of this gene between the resistant and sensitive groups. Blank represents that this cell type is not present in this dataset. (If the image exists, the user can click on it to enlarge it in a new window.)
boxplot

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Significant ligand-receptor pairs related to BRWD1

check buttonThis table shows the significant ligand-receptor pairs related to this gene across all datasets, timepoints and conditions. (Complete files can be downloaded from the download section.)

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Known drug resistance mechanisms of this gene

check buttonThis table shows the known drug resistance mechanisms of this gene. Clicking on this gene will link to another database that displays more drug resistance-related information.

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MicroRNAs (miRNA) regulating BRWD1

check buttonThis table shows the miRNAs with a score of more than 80 regulating this gene. (Complete files can be downloaded from the download section.)
Gene symbolmiRNAScoreGeneBank accession
BRWD1hsa-miR-364691.7952NM_033656
BRWD1hsa-miR-17-5p91.62NM_033656
BRWD1hsa-miR-106a-5p91.62NM_033656
BRWD1hsa-miR-20b-5p91.62NM_033656
BRWD1hsa-miR-426290.7327NM_033656
BRWD1hsa-miR-548ar-3p90.4689NM_033656
BRWD1hsa-miR-548a-3p90.4272NM_033656
BRWD1hsa-miR-509-3p90.2705NM_001007246
BRWD1hsa-miR-548f-3p90.1915NM_033656
BRWD1hsa-miR-548n90.0827NM_033656
BRWD1hsa-miR-519d-3p89.8332NM_033656
BRWD1hsa-miR-526b-3p89.8332NM_033656
BRWD1hsa-miR-93-5p89.8332NM_033656
BRWD1hsa-miR-548av-3p89.4356NM_033656
BRWD1hsa-miR-5582-3p89.339NM_033656
BRWD1hsa-miR-548az-3p89.2416NM_033656
BRWD1hsa-miR-548e-3p89.2416NM_033656
BRWD1hsa-miR-548bc89.2416NM_033656
BRWD1hsa-miR-1212389.023NM_033656
BRWD1hsa-miR-221-3p88.8571NM_018963
BRWD1hsa-miR-222-3p88.8571NM_018963
BRWD1hsa-miR-548g-3p88.7218NM_001007246
BRWD1hsa-miR-30e-3p88.3646NM_033656
BRWD1hsa-miR-302c-5p88.1735NM_033656
BRWD1hsa-miR-4680-3p87.9381NM_033656
BRWD1hsa-miR-205-3p87.8316NM_033656
BRWD1hsa-miR-548a-5p87.6339NM_033656
BRWD1hsa-miR-548ar-5p87.6339NM_033656
BRWD1hsa-miR-5003-3p87.5417NM_033656
BRWD1hsa-miR-1287-3p87.4256NM_033656
BRWD1hsa-miR-7152-3p87.4201NM_033656
BRWD1hsa-miR-6780b-5p87.1384NM_033656
BRWD1hsa-miR-548aw87.1249NM_033656
BRWD1hsa-miR-380-3p87.0855NM_001007246
BRWD1hsa-miR-548c-3p87.0418NM_033656
BRWD1hsa-miR-117986.9436NM_033656
BRWD1hsa-miR-368686.8003NM_033656
BRWD1hsa-miR-318286.6005NM_033656
BRWD1hsa-miR-4694-3p86.5737NM_001007246
BRWD1hsa-miR-4735-5p86.5542NM_018963
BRWD1hsa-miR-548ap-3p86.3882NM_033656
BRWD1hsa-miR-548aa86.3882NM_033656
BRWD1hsa-miR-548t-3p86.3882NM_033656
BRWD1hsa-miR-6728-5p86.3785NM_018963
BRWD1hsa-miR-191386.2327NM_033656
BRWD1hsa-miR-30d-3p86.2138NM_033656
BRWD1hsa-miR-30a-3p86.2138NM_033656
BRWD1hsa-miR-55986.0974NM_033656
BRWD1hsa-miR-888-3p86.0416NM_033656
BRWD1hsa-miR-345-5p85.9203NM_033656
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Motifs and transcription factors (TFs) regulating BRWD1

check buttonThis table shows the Motifs and transcription factors (TFs) regulating this gene. (Complete files can be downloaded from the download section.)
Gene symbolmotifTF_highConf
BRWD1metacluster_151.2ZNF23 (directAnnotation).
BRWD1metacluster_170.2KLF1; KLF10; KLF10; KLF11; KLF11; KLF11; KLF12; KLF12; KLF14; KLF15; KLF17; KLF2; KLF5; KLF7; KLF7; KLF8; MAZ; MAZ; PATZ1; SP1; SP1; SP1; SP2; SP2; SP2; SP2; SP2; SP2; SP2; SP2; SP4; SP4; SP5; SP6; SP7; SP8; SP9; ZNF281 (directAnnotation). E2F1; E2F4; KLF10; KLF13; KLF14; KLF17; KLF2; KLF7; SP1; SP1; SP3; SP4; SP5; SP6; SP7 (inferredBy_Orthology).
BRWD1metacluster_144.3ZNF704; ZNF704 (directAnnotation).
BRWD1homer__TWVGGTCCGC_HINFPHINFP (directAnnotation).
BRWD1metacluster_135.10MBD2; MBD2; MECP2; MECP2 (directAnnotation).
BRWD1jaspar__MA0079.5SP1 (directAnnotation).
BRWD1cisbp__M00341PAX6 (directAnnotation).
BRWD1kznf__ZNF383_Imbeault2017_OM_RCADEZNF383 (directAnnotation).
BRWD1transfac_pro__M06035ZNF749 (directAnnotation).
BRWD1metacluster_141.5NR3C1; THAP1; YY1; YY1; YY1; YY1; YY1; YY1; YY1; YY1; YY1; YY1; YY1; YY1; YY2; YY2; ZNF597 (directAnnotation). YY1; YY1; YY1; YY2; ZFP42 (inferredBy_Orthology).
BRWD1cisbp__M07938E2F1 (directAnnotation).
BRWD1metacluster_144.8ZNF30; ZNF30 (directAnnotation).
BRWD1jaspar__MA1122.1TFDP1 (directAnnotation).
BRWD1metacluster_3.11SP1; SP1; SP2; SP3; SP3; SP4 (directAnnotation).
BRWD1taipale_tf_pairs__E2F1_ELK1_SGCGCNNNNNNNNNNCGGAAGN_CAP_reprE2F1; ELK1 (directAnnotation).
BRWD1transfac_pro__M01253CNOT3 (directAnnotation).
BRWD1transfac_pro__M02090E2F4 (directAnnotation).
BRWD1metacluster_133.1ZNF304; ZNF304; ZSCAN22 (directAnnotation).
BRWD1kznf__ZNF90_Imbeault2017_OM_RCADEZNF90 (directAnnotation).
BRWD1transfac_pro__M06229ZNF91 (directAnnotation).
BRWD1dbtfbs__ZBTB8A_HEK293_ENCSR481FEC_merged_N1ZBTB8A (directAnnotation).
BRWD1kznf__ZNF846_Imbeault2017_RP_ChIP-seqZNF846 (directAnnotation).
BRWD1metacluster_3.7SP1; SP1; SP1; SP1; SP1; SP1; SP1; SP1; SP2; SP2; SP2; SP2; SP3; SP3; SP3; SP4; SP4; SP4; SP4; SP4; SP4; SP5 (directAnnotation).
BRWD1taipale_cyt_meth__E2F2_NCGCGCGCGCM_eDBD_methE2F2 (directAnnotation).
BRWD1kznf__ZNF571_Imbeault2017_OM_RCADEZNF571 (directAnnotation).
BRWD1metacluster_163.1KLF1; KLF1; KLF1; KLF1; KLF1; KLF1; KLF1; KLF10; KLF10; KLF12; KLF12; KLF12; KLF13; KLF16; KLF17; KLF2; KLF3; KLF3; KLF3; KLF3; KLF4; KLF4; KLF4; KLF4; KLF4; KLF5; KLF5; KLF5; KLF5; KLF6; KLF6; KLF6; KLF7; KLF9; KLF9; SALL4; SP1; ZNF148; ZNF148; ZNF526 (directAnnotation). EGR4; KLF1; KLF1; KLF12; KLF12; KLF12; KLF13; KLF14; KLF14; KLF14; KLF14; KLF14; KLF14; KLF16; KLF17; KLF17; KLF17; KLF17; KLF17; KLF18; KLF18; KLF18; KLF18; KLF18; KLF18; KLF2; KLF2; KLF3; KLF4; KLF4; KLF4; KLF4; KLF4; KLF4; KLF5; KLF5; KLF5; KLF6; KLF7; KLF7; KLF8; KLF8; KLF9; SP4; SP5; SP5; SP6; SP7; SP8; SP9; ZNF526 (inferredBy_Orthology).
BRWD1metacluster_15.2E2F1; E2F1; E2F1; E2F1; E2F1; E2F3; E2F4; E2F4; E2F4; E2F6; E2F6; E2F6; E2F6; E2F6; E2F6; E2F6; E2F7; TFDP1; TFDP2; ZNF566; ZNF566; ZNF574 (directAnnotation). E2F3; E2F3; E2F4 (inferredBy_Orthology).
BRWD1kznf__ZNF548_Imbeault2017_RP_RCADEZNF548 (directAnnotation).
BRWD1metacluster_195.2EGR2; KLF10; KLF10; KLF11; KLF11; KLF11; KLF13; KLF13; KLF13; KLF13; KLF13; KLF14; KLF14; KLF14; KLF14; KLF14; KLF15; KLF15; KLF16; KLF3; KLF8; KLF9; KLF9; KLF9; SP1; SP1; SP1; SP3; SP3; SP4; SP8; SP8; SP8; SP9; SP9 (directAnnotation). EGR1; KLF1; KLF12; KLF13; KLF14; KLF14; KLF14; KLF14; KLF14; KLF14; KLF16; KLF17; KLF17; KLF17; KLF17; KLF18; KLF18; KLF18; KLF18; KLF18; KLF18; KLF2; KLF2; KLF2; KLF3; KLF4; KLF5; KLF5; KLF5; KLF6; KLF7; KLF7; KLF8; KLF9; SP1; SP3; SP4; SP4; SP5; SP5; SP5; SP6; SP7; SP8; SP9 (inferredBy_Orthology).
BRWD1metacluster_3.10KLF2; KLF4 (directAnnotation).
BRWD1metacluster_160.20JUND; PRDM15 (directAnnotation).
BRWD1transfac_pro__M04817ZBTB33 (directAnnotation).
BRWD1transfac_pro__M01199TRIM28 (directAnnotation).
BRWD1taipale_cyt_meth__ZNF460_NRMCGCCCCCCGN_eDBD_methZNF460 (directAnnotation).
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Acts as a transcription factor

check buttonThis table shows that this differential gene acts as a transcription factor.

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Acts as a drug target

check buttonThis table shows that this differential gene acts as a drug target.



1"Sun X, Zhang Y, Li H, Zhou Y, Shi S, Chen Z, He X, Zhang H, Li F, Yin J, Mou M, Wang Y, Qiu Y, Zhu F. DRESIS: the first comprehensive landscape of drug resistance information. Nucleic Acids Res. 2023 Jan 6;51(D1):D1263-D1275. doi: 10.1093/nar/gkac812. PMID: 36243960; PMCID: PMC9825618."
2"Wishart DS, Feunang YD, Guo AC, Lo EJ, Marcu A, Grant JR, Sajed T, Johnson D, Li C, Sayeeda Z, Assempour N, Iynkkaran I, Liu Y, Maciejewski A, Gale N, Wilson A, Chin L, Cummings R, Le D, Pon A, Knox C, Wilson M. DrugBank 5.0: a major update to the DrugBank database for 2018. Nucleic Acids Res. 2018 Jan 4;46(D1):D1074-D1082. doi: 10.1093/nar/gkx1037. PMID: 29126136; PMCID: PMC5753335."