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Center for Computational Systems Medicine
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Gene summary

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Datasets with differential expression of this gene

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Expression of this gene in the resistant group across all datasets and cell types

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Significant ligand-receptor pairs related to this gene (This gene does not contain this module)

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Known drug resistance mechanisms of this gene (This gene does not contain this module)

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MicroRNAs (miRNAs) regulating this gene

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Motifs and transcription factors (TFs) regulating this gene

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Acts as a transcription factor (This gene does not contain this module)

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Acts as a drug target< (This gene does not contain this module)

Gene: ARRDC3

Summary for ARRDC3

Gene informationGene symbol

ARRDC3

Ensembl ID

ENSG00000113369

Entrez ID

57561

Gene namearrestin domain containing 3
SynonymsKIAA1376|TLIMP
Gene typeprotein_coding
UniProtAcc

Q96B67


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Dataset with differentially expressed gene: ARRDC3

check buttonDifferentially expression genes between the resistant and sensitive groups. A positive avg_log2FC represents significantly high expression in the resistant group, while a negative avg_log2FC represents significantly low expression in the resistant group.
DatasetSourceTissueCancer type level1Cancer type level2Drug typeRegimenTimepointCell typeavg_log2FCp_val_adj

GSE164551

patientsBone marrow aspirateMultiple myelomaRefractory multiple myeloma (MM)ImmunotherapyCAR-TNAMono/Macro-0.8666330.00e+00

GSE189460

patientsBone marrow aspirateMultiple myelomaMultiple myeloma (MM)Targeted therapybortezomib + melphalan + prednisolonepreMalignant cells0.3304750.00e+00

GSE161801_PI

patientsBone marrow aspirateMultiple myelomaRefractory multiple myeloma (MM)Targeted therapycarfilzomib + dexamethasonepostMalignant cells-0.6329672.72e-40

GSE161801_PI

patientsBone marrow aspirateMultiple myelomaRefractory multiple myeloma (MM)Targeted therapycarfilzomib + dexamethasonepreMalignant cells-0.6167460.00e+00

GSE168668

LNCaP cell lineCell lineProstate cancerProstate cancerTargeted therapyenzalutamideNAMalignant cells0.4342990.00e+00

GSE199333

patientsBone marrow aspirateAcute myeloid leukemiaPrimary FLT3-ITD-mutated acute myeloid leukemia (AML)Targeted therapygilteritinibpreErythrocytes-0.3009465.19e-25

GSE199333

patientsBone marrow aspirateAcute myeloid leukemiaPrimary FLT3-ITD-mutated acute myeloid leukemia (AML)Targeted therapygilteritinibpreMalignant cells0.2538160.00e+00

GSE111014

patientsPeripheral blood mononuclear cellsChronic lymphocytic leukemiaChronic lymphocytic leukemia (CLL)Targeted therapyibrutinibpostMalignant cells-0.3657214.57e-18

GSE111014

patientsPeripheral blood mononuclear cellsChronic lymphocytic leukemiaChronic lymphocytic leukemia (CLL)Targeted therapyibrutinibpreMalignant cells-0.3466250.00e+00

GSE131984_JQ1

SUM159 cell lineCell lineBreast cancerTriple-negative breast cancer (TNBC)Targeted therapyJQ1NAMalignant cells0.3023661.95e-15

GSE131984_JQ1Pal

SUM159 cell lineCell lineBreast cancerTriple-negative breast cancer (TNBC)Targeted therapyJQ1 + palbociclibNAMalignant cells0.3496952.54e-21

GSE131984_Pal

SUM159 cell lineCell lineBreast cancerTriple-negative breast cancer (TNBC)Targeted therapypalbociclibNAMalignant cells0.2752797.25e-10

GSE161801_IMiD

patientsBone marrow aspirateMultiple myelomaRefractory multiple myeloma (MM)Targeted therapypomalidomide + dexamethasone OR lenalidomide + dexamethasonepreMalignant cells0.3215520.00e+00

GSE161801_IMiD

patientsBone marrow aspirateMultiple myelomaRefractory multiple myeloma (MM)Targeted therapypomalidomide + dexamethasone OR lenalidomide + dexamethasonepreB cells0.4458899.13e-27

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Expression of ARRDC3 in the resistant group across all datasets and cell types

check buttonRed dots represent significantly high expression in the resistant group, while blue dots represent significantly low expression in the resistant group. White dots represent that there is no significant difference in the expression of this gene between the resistant and sensitive groups. Blank represents that this cell type is not present in this dataset. (If the image exists, the user can click on it to enlarge it in a new window.)
boxplot

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Significant ligand-receptor pairs related to ARRDC3

check buttonThis table shows the significant ligand-receptor pairs related to this gene across all datasets, timepoints and conditions. (Complete files can be downloaded from the download section.)

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Known drug resistance mechanisms of this gene

check buttonThis table shows the known drug resistance mechanisms of this gene. Clicking on this gene will link to another database that displays more drug resistance-related information.

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MicroRNAs (miRNA) regulating ARRDC3

check buttonThis table shows the miRNAs with a score of more than 80 regulating this gene. (Complete files can be downloaded from the download section.)
Gene symbolmiRNAScoreGeneBank accession
ARRDC3hsa-miR-381-3p84.4505NM_020801
ARRDC3hsa-miR-30084.4505NM_020801
ARRDC3hsa-miR-374a-3p84.3414NM_020801
ARRDC3hsa-miR-432583.7185NM_020801
ARRDC3hsa-miR-2115-3p83.6496NM_020801
ARRDC3hsa-miR-3692-3p83.2579NM_020801
ARRDC3hsa-miR-138-5p83.2157NM_020801
ARRDC3hsa-miR-378g82.0777NM_020801
ARRDC3hsa-miR-32582.0293NM_020801
ARRDC3hsa-miR-6868-3p82.0077NM_020801
ARRDC3hsa-miR-607781.9427NM_020801
ARRDC3hsa-miR-448681.3138NM_020801
ARRDC3hsa-miR-469881.0687NM_020801
ARRDC3hsa-miR-4645-5p81.0207NM_020801
ARRDC3hsa-miR-314980.6516NM_020801
ARRDC3hsa-miR-7850-5p80.604NM_020801
ARRDC3hsa-miR-561-3p80.463NM_020801
ARRDC3hsa-miR-642b-5p80.2543NM_020801
ARRDC3hsa-miR-569580.1092NM_020801
ARRDC3hsa-miR-5010-3p80.0642NM_020801
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Motifs and transcription factors (TFs) regulating ARRDC3

check buttonThis table shows the Motifs and transcription factors (TFs) regulating this gene. (Complete files can be downloaded from the download section.)
Gene symbolmotifTF_highConf
ARRDC3transfac_pro__M05916ZNF407 (directAnnotation).
ARRDC3transfac_pro__M06751ZNF510 (directAnnotation).
ARRDC3transfac_pro__M06117ZNF23 (directAnnotation).
ARRDC3metacluster_162.5NR1D1; NR1D1; RORA; RORA; RORA; RORA; RORA; RORC; RORC (directAnnotation). NR1D1; PPARG; RORA; RORC (inferredBy_Orthology).
ARRDC3tfdimers__MD00433NKX3-2; ZNF217 (directAnnotation).
ARRDC3transfac_public__M00123MAX; MYC (directAnnotation).
ARRDC3taipale_tf_pairs__TCF15_NACAYATGNN_HTTCF15 (directAnnotation).
ARRDC3taipale_tf_pairs__HOXB2_TBX3_AGGTGTTAATKN_CAPHOXB2; TBX3 (directAnnotation).
ARRDC3tfdimers__MD00463CHURC1; DBP (directAnnotation).
ARRDC3cisbp__M00262ARX (directAnnotation).
ARRDC3jaspar__MA0039.4KLF4 (directAnnotation).
ARRDC3metacluster_163.1KLF1; KLF1; KLF1; KLF1; KLF1; KLF1; KLF1; KLF10; KLF10; KLF12; KLF12; KLF12; KLF13; KLF16; KLF17; KLF2; KLF3; KLF3; KLF3; KLF3; KLF4; KLF4; KLF4; KLF4; KLF4; KLF5; KLF5; KLF5; KLF5; KLF6; KLF6; KLF6; KLF7; KLF9; KLF9; SALL4; SP1; ZNF148; ZNF148; ZNF526 (directAnnotation). EGR4; KLF1; KLF1; KLF12; KLF12; KLF12; KLF13; KLF14; KLF14; KLF14; KLF14; KLF14; KLF14; KLF16; KLF17; KLF17; KLF17; KLF17; KLF17; KLF18; KLF18; KLF18; KLF18; KLF18; KLF18; KLF2; KLF2; KLF3; KLF4; KLF4; KLF4; KLF4; KLF4; KLF4; KLF5; KLF5; KLF5; KLF6; KLF7; KLF7; KLF8; KLF8; KLF9; SP4; SP5; SP5; SP6; SP7; SP8; SP9; ZNF526 (inferredBy_Orthology).
ARRDC3transfac_pro__M04595SALL2 (directAnnotation).
ARRDC3transfac_pro__M04862NRF1 (directAnnotation).
ARRDC3taipale_tf_pairs__ELF2_NATGCGGAAGTR_HTELF2 (directAnnotation).
ARRDC3kznf__ZNF384_Schmitges2016_RCADEZNF384 (directAnnotation).
ARRDC3taipale_tf_pairs__HOXB2_ELK3_RSCGGAAGTMRTTA_CAPELK3; HOXB2 (directAnnotation).
ARRDC3transfac_pro__M04748GABPA (directAnnotation).
ARRDC3hocomoco__HSFY1_HUMAN.H11MO.0.DHSFY1; HSFY2 (directAnnotation).
ARRDC3taipale_tf_pairs__TEAD4_ETV4_RCCGGAAATRCC_CAPETV4; TEAD4 (directAnnotation).
ARRDC3hocomoco__TYY2_HUMAN.H11MO.0.DYY2 (directAnnotation).
ARRDC3tfdimers__MD00302IRF7; IRF8 (directAnnotation).
ARRDC3taipale_cyt_meth__CDX2_NRTCGTAAANNN_eDBD_methCDX2 (directAnnotation).
ARRDC3stark__RCGCMATTWYY1 (inferredBy_Orthology).
ARRDC3metacluster_130.3ZNF492; ZNF492 (directAnnotation). OVOL2; OVOL3; PEG3; PLAG1; PLAGL1; PLAGL2; REST; SCAND1; ZKSCAN2; ZNF131; ZNF174; ZNF18; ZNF202; ZNF274; ZNF444; ZNF446; ZNF496; ZNF518A; ZNF518B; ZNF576; ZNF641; ZNF770; ZSCAN1; ZSCAN18; ZSCAN29; ZSCAN32; ZSCAN5A; ZSCAN5B; ZSCAN5C (inferredBy_Orthology).
ARRDC3jaspar__MA1125.1ZNF384 (directAnnotation).
ARRDC3kznf__CTCF_Rhee2011.2_ChIP-exoCTCF (directAnnotation).
ARRDC3transfac_pro__M00803E2F1; E2F3; E2F4; TFDP1 (directAnnotation).
ARRDC3kznf__ZNF613_Imbeault2017_RP_RCADEZNF613 (directAnnotation).
ARRDC3tfdimers__MD00069IKZF1; PDX1 (directAnnotation).
ARRDC3transfac_pro__M04916TAF1 (directAnnotation).
ARRDC3cisbp__M01174OSR1 (inferredBy_Orthology).
ARRDC3transfac_pro__M05521ZNF398 (directAnnotation).
ARRDC3hocomoco__FOXJ3_HUMAN.H11MO.1.BFOXJ3 (directAnnotation).
ARRDC3transfac_pro__M06237ZNF846 (directAnnotation).
ARRDC3taipale_tf_pairs__ETV2_CEBPD_RSCGGANNTTGCGYAAN_CAP_reprCEBPD; ETV2 (directAnnotation).
ARRDC3tfdimers__MD00218ATF1; ATF2; ATF3; ATF4; ATF7; CREB1; CREM; ELF1 (directAnnotation).
ARRDC3transfac_pro__M05715ZNF133 (directAnnotation).
ARRDC3taipale_tf_pairs__ETV5_CEBPD_NSCGGANNTTRCGYAAN_CAPCEBPD; ETV5 (directAnnotation).
ARRDC3taipale_tf_pairs__HOXB2_HOXB13_NNMATCACATAAAN_CAP_reprHOXB13; HOXB2 (directAnnotation).
ARRDC3transfac_pro__M05619ZSCAN5C (directAnnotation).
ARRDC3jaspar__MA1563.2SOX18 (directAnnotation).
ARRDC3jaspar__MA1983.1ZNF582 (directAnnotation).
ARRDC3hocomoco__ZBT14_HUMAN.H11MO.0.CZBTB14 (directAnnotation).
ARRDC3nitta__Ets98B_TTCTAG20NTA_KI_TAMCGGATGC_m2_c4SPDEF (inferredBy_Orthology).
ARRDC3taipale_tf_pairs__GCM1_FOXI1_TGTTGANGCGGGN_CAPFOXI1; GCM1 (directAnnotation).
ARRDC3transfac_pro__M06071ZNF814 (directAnnotation).
ARRDC3metacluster_45.4E2F2 (directAnnotation).
ARRDC3transfac_pro__M12441ZNF281 (inferredBy_Orthology).
ARRDC3taipale_tf_pairs__GCM1_FOXI1_NTGTTGATRNGGGN_CAP_reprFOXI1; GCM1 (directAnnotation).
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Acts as a transcription factor

check buttonThis table shows that this differential gene acts as a transcription factor.

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Acts as a drug target

check buttonThis table shows that this differential gene acts as a drug target.



1"Sun X, Zhang Y, Li H, Zhou Y, Shi S, Chen Z, He X, Zhang H, Li F, Yin J, Mou M, Wang Y, Qiu Y, Zhu F. DRESIS: the first comprehensive landscape of drug resistance information. Nucleic Acids Res. 2023 Jan 6;51(D1):D1263-D1275. doi: 10.1093/nar/gkac812. PMID: 36243960; PMCID: PMC9825618."
2"Wishart DS, Feunang YD, Guo AC, Lo EJ, Marcu A, Grant JR, Sajed T, Johnson D, Li C, Sayeeda Z, Assempour N, Iynkkaran I, Liu Y, Maciejewski A, Gale N, Wilson A, Chin L, Cummings R, Le D, Pon A, Knox C, Wilson M. DrugBank 5.0: a major update to the DrugBank database for 2018. Nucleic Acids Res. 2018 Jan 4;46(D1):D1074-D1082. doi: 10.1093/nar/gkx1037. PMID: 29126136; PMCID: PMC5753335."