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Center for Computational Systems Medicine
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Gene summary

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Datasets with differential expression of this gene

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Expression of this gene in the resistant group across all datasets and cell types

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Significant ligand-receptor pairs related to this gene (This gene does not contain this module)

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Known drug resistance mechanisms of this gene (This gene does not contain this module)

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MicroRNAs (miRNAs) regulating this gene

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Motifs and transcription factors (TFs) regulating this gene

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Acts as a transcription factor (This gene does not contain this module)

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Acts as a drug target< (This gene does not contain this module)

Gene: YIPF6

Summary for YIPF6

Gene informationGene symbol

YIPF6

Ensembl ID

ENSG00000181704

Entrez ID

286451

Gene nameYip1 domain family member 6
SynonymsFinGER6|MGC21416
Gene typeprotein_coding
UniProtAcc

NA


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Dataset with differentially expressed gene: YIPF6

check buttonDifferentially expression genes between the resistant and sensitive groups. A positive avg_log2FC represents significantly high expression in the resistant group, while a negative avg_log2FC represents significantly low expression in the resistant group.
DatasetSourceTissueCancer type level1Cancer type level2Drug typeRegimenTimepointCell typeavg_log2FCp_val_adj

GSE131984_JQ1

SUM159 cell lineCell lineBreast cancerTriple-negative breast cancer (TNBC)Targeted therapyJQ1NAMalignant cells-0.4227493.50e-30

GSE131984_JQ1Pac

SUM159 cell lineCell lineBreast cancerTriple-negative breast cancer (TNBC)Targeted therapyJQ1 + paclitaxelNAMalignant cells-0.5082059.18e-26

GSE131984_JQ1Pal

SUM159 cell lineCell lineBreast cancerTriple-negative breast cancer (TNBC)Targeted therapyJQ1 + palbociclibNAMalignant cells-0.4519021.61e-25

GSE175716

PDXTumor tissueLiver cancerAdvanced hepatocellular carcinomaTargeted therapysorafenibNAMalignant cells-0.3860852.07e-26

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Expression of YIPF6 in the resistant group across all datasets and cell types

check buttonRed dots represent significantly high expression in the resistant group, while blue dots represent significantly low expression in the resistant group. White dots represent that there is no significant difference in the expression of this gene between the resistant and sensitive groups. Blank represents that this cell type is not present in this dataset. (If the image exists, the user can click on it to enlarge it in a new window.)
boxplot

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Significant ligand-receptor pairs related to YIPF6

check buttonThis table shows the significant ligand-receptor pairs related to this gene across all datasets, timepoints and conditions. (Complete files can be downloaded from the download section.)

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Known drug resistance mechanisms of this gene

check buttonThis table shows the known drug resistance mechanisms of this gene. Clicking on this gene will link to another database that displays more drug resistance-related information.

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MicroRNAs (miRNA) regulating YIPF6

check buttonThis table shows the miRNAs with a score of more than 80 regulating this gene. (Complete files can be downloaded from the download section.)
Gene symbolmiRNAScoreGeneBank accession
YIPF6hsa-miR-4795-3p99.7383NM_001195214
YIPF6hsa-miR-551b-5p99.0733NM_001195214
YIPF6hsa-miR-126-5p98.656NM_001195214
YIPF6hsa-miR-4694-3p97.9614NM_001195214
YIPF6hsa-miR-3942-3p97.2482NM_001195214
YIPF6hsa-miR-95-5p97.1677NM_001195214
YIPF6hsa-miR-5589-3p96.8453NM_001195214
YIPF6hsa-miR-432695.3131NM_001195214
YIPF6hsa-miR-6891-5p95.0624NM_001195214
YIPF6hsa-miR-442793.8204NM_001195214
YIPF6hsa-miR-469893.5901NM_001195214
YIPF6hsa-miR-364693.3214NM_001195214
YIPF6hsa-miR-366293.3191NM_001195214
YIPF6hsa-miR-576-5p92.5668NM_001195214
YIPF6hsa-miR-1211892.5324NM_001195214
YIPF6hsa-miR-6841-5p92.4996NM_001195214
YIPF6hsa-miR-3173-3p92.4814NM_001195214
YIPF6hsa-miR-664a-3p92.379NM_001195214
YIPF6hsa-miR-653-3p91.7897NM_001195214
YIPF6hsa-miR-4720-3p91.469NM_001195214
YIPF6hsa-miR-4676-3p91.2762NM_001195214
YIPF6hsa-miR-892c-3p91.2762NM_001195214
YIPF6hsa-miR-452-5p91.2089NM_001195214
YIPF6hsa-miR-548aj-3p91.0554NM_001195214
YIPF6hsa-miR-548x-3p91.0554NM_001195214
YIPF6hsa-miR-10398-5p90.7839NM_001195214
YIPF6hsa-miR-60790.1277NM_001195214
YIPF6hsa-miR-892c-5p89.7906NM_001195214
YIPF6hsa-miR-548ae-3p88.7939NM_001195214
YIPF6hsa-miR-548aq-3p88.7939NM_001195214
YIPF6hsa-miR-3121-3p88.663NM_001195214
YIPF6hsa-miR-664b-3p88.5896NM_001195214
YIPF6hsa-miR-579-3p88.5896NM_001195214
YIPF6hsa-miR-6884-5p88.0121NM_001195214
YIPF6hsa-miR-584-3p87.9478NM_001195214
YIPF6hsa-miR-499a-5p87.8056NM_001195214
YIPF6hsa-miR-548j-3p86.6907NM_001195214
YIPF6hsa-miR-548ah-3p86.6907NM_001195214
YIPF6hsa-miR-548am-3p86.6907NM_001195214
YIPF6hsa-miR-127586.4462NM_001195214
YIPF6hsa-miR-335-3p86.3343NM_001195214
YIPF6hsa-miR-6879-3p86.2632NM_001195214
YIPF6hsa-miR-9983-3p86.0635NM_001195214
YIPF6hsa-miR-514a-5p86.0226NM_001195214
YIPF6hsa-miR-425185.6219NM_001195214
YIPF6hsa-miR-6878-5p85.5454NM_001195214
YIPF6hsa-miR-485-5p85.5079NM_001195214
YIPF6hsa-miR-6758-3p84.808NM_001195214
YIPF6hsa-miR-548c-3p84.6233NM_001195214
YIPF6hsa-miR-450b-5p84.597NM_001195214
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Motifs and transcription factors (TFs) regulating YIPF6

check buttonThis table shows the Motifs and transcription factors (TFs) regulating this gene. (Complete files can be downloaded from the download section.)
Gene symbolmotifTF_highConf
YIPF6jaspar__MA0185.1DEAF1 (inferredBy_Orthology).
YIPF6taipale_tf_pairs__ETV5_EOMES_TNRCACCGGAWN_CAPEOMES; ETV5 (directAnnotation).
YIPF6taipale_tf_pairs__TEAD4_ETV4_RCCGGAAATRCC_CAPETV4; TEAD4 (directAnnotation).
YIPF6taipale_cyt_meth__ZNF385D_NCGTCGCGACGN_eDBD_methZNF385D (directAnnotation).
YIPF6metacluster_81.7CREB1 (directAnnotation).
YIPF6taipale_tf_pairs__TEAD4_ERG_RSCGGAAATRCC_CAP_reprERG; TEAD4 (directAnnotation).
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Acts as a transcription factor

check buttonThis table shows that this differential gene acts as a transcription factor.

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Acts as a drug target

check buttonThis table shows that this differential gene acts as a drug target.



1"Sun X, Zhang Y, Li H, Zhou Y, Shi S, Chen Z, He X, Zhang H, Li F, Yin J, Mou M, Wang Y, Qiu Y, Zhu F. DRESIS: the first comprehensive landscape of drug resistance information. Nucleic Acids Res. 2023 Jan 6;51(D1):D1263-D1275. doi: 10.1093/nar/gkac812. PMID: 36243960; PMCID: PMC9825618."
2"Wishart DS, Feunang YD, Guo AC, Lo EJ, Marcu A, Grant JR, Sajed T, Johnson D, Li C, Sayeeda Z, Assempour N, Iynkkaran I, Liu Y, Maciejewski A, Gale N, Wilson A, Chin L, Cummings R, Le D, Pon A, Knox C, Wilson M. DrugBank 5.0: a major update to the DrugBank database for 2018. Nucleic Acids Res. 2018 Jan 4;46(D1):D1074-D1082. doi: 10.1093/nar/gkx1037. PMID: 29126136; PMCID: PMC5753335."