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Center for Computational Systems Medicine
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Gene summary

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Datasets with differential expression of this gene

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Expression of this gene in the resistant group across all datasets and cell types

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Significant ligand-receptor pairs related to this gene (This gene does not contain this module)

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Known drug resistance mechanisms of this gene (This gene does not contain this module)

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MicroRNAs (miRNAs) regulating this gene

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Motifs and transcription factors (TFs) regulating this gene

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Acts as a transcription factor (This gene does not contain this module)

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Acts as a drug target

Gene: VKORC1L1

Summary for VKORC1L1

Gene informationGene symbol

VKORC1L1

Ensembl ID

ENSG00000196715

Entrez ID

154807

Gene namevitamin K epoxide reductase complex subunit 1 like 1
SynonymsNA
Gene typeprotein_coding
UniProtAcc

NA


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Dataset with differentially expressed gene: VKORC1L1

check buttonDifferentially expression genes between the resistant and sensitive groups. A positive avg_log2FC represents significantly high expression in the resistant group, while a negative avg_log2FC represents significantly low expression in the resistant group.
DatasetSourceTissueCancer type level1Cancer type level2Drug typeRegimenTimepointCell typeavg_log2FCp_val_adj

GSE186960

Panc1 cell lineCell linePancreatic cancerPancreatic ductal adenocarcinoma (PDAC)ChemotherapygemcitabineNAMalignant cells0.4339823.87e-35

GSE139386

H3122 cell lineCell lineLung cancerEML4-ALK fusion-positive non-small cell lung cancer (NSCLC)Targeted therapyceritinibNAMalignant cells-0.6717430.00e+00

GSE108397

451Lu cell lineCell lineMelanomaMelanomaTargeted therapyPLX-4720NAMalignant cells-0.4350280.00e+00

GSE175716

PDXTumor tissueLiver cancerAdvanced hepatocellular carcinomaTargeted therapysorafenibNAMalignant cells1.370480.00e+00

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Expression of VKORC1L1 in the resistant group across all datasets and cell types

check buttonRed dots represent significantly high expression in the resistant group, while blue dots represent significantly low expression in the resistant group. White dots represent that there is no significant difference in the expression of this gene between the resistant and sensitive groups. Blank represents that this cell type is not present in this dataset. (If the image exists, the user can click on it to enlarge it in a new window.)
boxplot

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Significant ligand-receptor pairs related to VKORC1L1

check buttonThis table shows the significant ligand-receptor pairs related to this gene across all datasets, timepoints and conditions. (Complete files can be downloaded from the download section.)

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Known drug resistance mechanisms of this gene

check buttonThis table shows the known drug resistance mechanisms of this gene. Clicking on this gene will link to another database that displays more drug resistance-related information.

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MicroRNAs (miRNA) regulating VKORC1L1

check buttonThis table shows the miRNAs with a score of more than 80 regulating this gene. (Complete files can be downloaded from the download section.)
Gene symbolmiRNAScoreGeneBank accession
VKORC1L1hsa-miR-397398.9653NM_001284342
VKORC1L1hsa-miR-365898.5075NM_001284342
VKORC1L1hsa-miR-3144-3p98.1537NM_001284342
VKORC1L1hsa-miR-366297.2946NM_001284342
VKORC1L1hsa-miR-144-3p96.8602NM_001284342
VKORC1L1hsa-miR-4735-5p96.6364NM_001284342
VKORC1L1hsa-miR-548at-5p96.3018NM_001284342
VKORC1L1hsa-miR-4789-5p96.0905NM_001284342
VKORC1L1hsa-miR-432895.1654NM_173517
VKORC1L1hsa-miR-1468-3p94.6124NM_173517
VKORC1L1hsa-miR-130594.4435NM_001284342
VKORC1L1hsa-miR-519e-5p94.2185NM_001284342
VKORC1L1hsa-miR-515-5p94.2185NM_001284342
VKORC1L1hsa-miR-361194.05NM_173517
VKORC1L1hsa-miR-4699-3p94.0136NM_173517
VKORC1L1hsa-miR-23c93.52NM_173517
VKORC1L1hsa-miR-23b-3p93.52NM_173517
VKORC1L1hsa-miR-23a-3p93.52NM_173517
VKORC1L1hsa-miR-655-3p92.8796NM_001284342
VKORC1L1hsa-miR-374c-5p92.8796NM_001284342
VKORC1L1hsa-miR-942-3p92.8373NM_173517
VKORC1L1hsa-miR-4742-3p92.1799NM_001284342
VKORC1L1hsa-miR-26a-2-3p91.9067NM_001284342
VKORC1L1hsa-miR-26a-1-3p91.9067NM_001284342
VKORC1L1hsa-miR-548p91.8232NM_173517
VKORC1L1hsa-miR-642b-3p91.439NM_001284342
VKORC1L1hsa-miR-642a-3p91.439NM_001284342
VKORC1L1hsa-miR-448691.0661NM_001284342
VKORC1L1hsa-miR-5580-3p90.9957NM_001284342
VKORC1L1hsa-miR-6504-3p90.8979NM_001284342
VKORC1L1hsa-miR-5582-3p90.255NM_001284342
VKORC1L1hsa-miR-3158-5p89.8605NM_173517
VKORC1L1hsa-miR-875-5p89.3199NM_001284342
VKORC1L1hsa-miR-548d-3p89.0678NM_173517
VKORC1L1hsa-miR-5088-3p88.8859NM_173517
VKORC1L1hsa-miR-548g-3p88.5378NM_173517
VKORC1L1hsa-miR-6756-3p88.4293NM_173517
VKORC1L1hsa-miR-3127-3p88.4293NM_173517
VKORC1L1hsa-miR-10399-5p88.3391NM_001284342
VKORC1L1hsa-miR-548z88.068NM_173517
VKORC1L1hsa-miR-548ac88.068NM_173517
VKORC1L1hsa-miR-548bb-3p88.068NM_173517
VKORC1L1hsa-miR-548h-3p88.068NM_173517
VKORC1L1hsa-miR-548x-3p87.4914NM_173517
VKORC1L1hsa-miR-548aj-3p87.4914NM_173517
VKORC1L1hsa-miR-9851-3p87.2891NM_173517
VKORC1L1hsa-miR-584-3p87.2022NM_001284342
VKORC1L1hsa-miR-593-5p85.9531NM_173517
VKORC1L1hsa-miR-548c-3p85.5554NM_173517
VKORC1L1hsa-miR-548g-5p84.8851NM_173517
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Motifs and transcription factors (TFs) regulating VKORC1L1

check buttonThis table shows the Motifs and transcription factors (TFs) regulating this gene. (Complete files can be downloaded from the download section.)
Gene symbolmotifTF_highConf
VKORC1L1metacluster_7.13ZFX (directAnnotation).
VKORC1L1cisbp__M01863ZNF711 (inferredBy_Orthology).
VKORC1L1transfac_pro__M05578ZFP92 (inferredBy_Orthology).
VKORC1L1metacluster_151.2ZNF23 (directAnnotation).
VKORC1L1metacluster_170.2KLF1; KLF10; KLF10; KLF11; KLF11; KLF11; KLF12; KLF12; KLF14; KLF15; KLF17; KLF2; KLF5; KLF7; KLF7; KLF8; MAZ; MAZ; PATZ1; SP1; SP1; SP1; SP2; SP2; SP2; SP2; SP2; SP2; SP2; SP2; SP4; SP4; SP5; SP6; SP7; SP8; SP9; ZNF281 (directAnnotation). E2F1; E2F4; KLF10; KLF13; KLF14; KLF17; KLF2; KLF7; SP1; SP1; SP3; SP4; SP5; SP6; SP7 (inferredBy_Orthology).
VKORC1L1transfac_pro__M05479ZNF580 (directAnnotation).
VKORC1L1metacluster_155.23BCL11B; ZNF711; ZNF711 (directAnnotation). ZFY (inferredBy_Orthology).
VKORC1L1kznf__ZNF783_Imbeault2017_OM_MEMEZNF783 (directAnnotation).
VKORC1L1metacluster_144.3ZNF704; ZNF704 (directAnnotation).
VKORC1L1metacluster_182.10ZFX (directAnnotation).
VKORC1L1hocomoco__KLF13_HUMAN.H11MO.0.DKLF13 (directAnnotation).
VKORC1L1homer__TWVGGTCCGC_HINFPHINFP (directAnnotation).
VKORC1L1metacluster_135.10MBD2; MBD2; MECP2; MECP2 (directAnnotation).
VKORC1L1jaspar__MA0079.5SP1 (directAnnotation).
VKORC1L1taipale_tf_pairs__GCM1_ETV1_RTRNNGGCGGAAGTN_CAPETV1; GCM1 (directAnnotation).
VKORC1L1metacluster_55.3E2F6; EGR1; NRF1; NRF1; NRF1; NRF1; NRF1; NRF1; NRF1; NRF1; NRF1; NRF1; ZBTB2; ZSCAN10 (directAnnotation). NFE2L1; NRF1; NRF1; NRF1 (inferredBy_Orthology).
VKORC1L1metacluster_15.3E2F1; E2F6; E2F8; E2F8; TFDP1 (directAnnotation). E2F3 (inferredBy_Orthology).
VKORC1L1taipale_cyt_meth__E2F2_GCGCGCGCGYW_eDBD_reprE2F2 (directAnnotation).
VKORC1L1taipale_tf_pairs__E2F1_ELK1_SGCGCNNNNNCGGAAGN_CAP_reprE2F1; ELK1 (directAnnotation).
VKORC1L1transfac_pro__M00652NRF1 (directAnnotation).
VKORC1L1taipale_tf_pairs__E2F1_HES7_RRCRCGYGYNNNNSGCGCSN_CAP_reprE2F1; HES7 (directAnnotation).
VKORC1L1transfac_pro__M04866HDAC2 (directAnnotation).
VKORC1L1jaspar__MA1122.1TFDP1 (directAnnotation).
VKORC1L1swissregulon__hs__ZBTB14ZBTB14 (directAnnotation).
VKORC1L1transfac_pro__M04918EGR1 (directAnnotation).
VKORC1L1metacluster_144.8ZNF30; ZNF30 (directAnnotation).
VKORC1L1tfdimers__MD00154MZF1; SREBF1 (directAnnotation).
VKORC1L1kznf__ZNF730_Imbeault2017_RP_RCADEZNF730 (directAnnotation).
VKORC1L1transfac_pro__M01219SP1 (directAnnotation). SP3 (inferredBy_Orthology).
VKORC1L1cisbp__M00249WT1 (directAnnotation).
VKORC1L1taipale_tf_pairs__GCM1_ELF1_GTGCGGGCGGAAGTN_CAP_reprELF1; GCM1 (directAnnotation).
VKORC1L1homer__GGCGGGAARN_E2F6E2F6 (directAnnotation).
VKORC1L1taipale_cyt_meth__ZNF460_NRMCGCCCCCCGN_eDBD_methZNF460 (directAnnotation).
VKORC1L1kznf__ZNF571_Imbeault2017_OM_RCADEZNF571 (directAnnotation).
VKORC1L1taipale_cyt_meth__KLF12_NGCCGACGCCCW_FL_meth_reprKLF12 (directAnnotation).
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Acts as a transcription factor

check buttonThis table shows that this differential gene acts as a transcription factor.

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Acts as a drug target

check buttonThis table shows that this differential gene acts as a drug target.
Target nameDrug nameDrug IDDrug type
VKORC1L1"Menadione"

DB00170

small molecule
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1"Sun X, Zhang Y, Li H, Zhou Y, Shi S, Chen Z, He X, Zhang H, Li F, Yin J, Mou M, Wang Y, Qiu Y, Zhu F. DRESIS: the first comprehensive landscape of drug resistance information. Nucleic Acids Res. 2023 Jan 6;51(D1):D1263-D1275. doi: 10.1093/nar/gkac812. PMID: 36243960; PMCID: PMC9825618."
2"Wishart DS, Feunang YD, Guo AC, Lo EJ, Marcu A, Grant JR, Sajed T, Johnson D, Li C, Sayeeda Z, Assempour N, Iynkkaran I, Liu Y, Maciejewski A, Gale N, Wilson A, Chin L, Cummings R, Le D, Pon A, Knox C, Wilson M. DrugBank 5.0: a major update to the DrugBank database for 2018. Nucleic Acids Res. 2018 Jan 4;46(D1):D1074-D1082. doi: 10.1093/nar/gkx1037. PMID: 29126136; PMCID: PMC5753335."