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Center for Computational Systems Medicine
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Gene summary

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Datasets with differential expression of this gene

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Expression of this gene in the resistant group across all datasets and cell types

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Significant ligand-receptor pairs related to this gene (This gene does not contain this module)

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Known drug resistance mechanisms of this gene (This gene does not contain this module)

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MicroRNAs (miRNAs) regulating this gene

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Motifs and transcription factors (TFs) regulating this gene

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Acts as a transcription factor (This gene does not contain this module)

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Acts as a drug target< (This gene does not contain this module)

Gene: TGFBR3

Summary for TGFBR3

Gene informationGene symbol

TGFBR3

Ensembl ID

ENSG00000069702

Entrez ID

7049

Gene nametransforming growth factor beta receptor 3
Synonymsbetaglycan|BGCAN
Gene typeprotein_coding
UniProtAcc

NA


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Dataset with differentially expressed gene: TGFBR3

check buttonDifferentially expression genes between the resistant and sensitive groups. A positive avg_log2FC represents significantly high expression in the resistant group, while a negative avg_log2FC represents significantly low expression in the resistant group.
DatasetSourceTissueCancer type level1Cancer type level2Drug typeRegimenTimepointCell typeavg_log2FCp_val_adj

GSE169246_PacBlood

patientsPeripheral blood mononuclear cellsBreast cancerAdvanced triple-negative breast cancer (TNBC)ChemotherapypaclitaxelpreNK cells0.4024440.00e+00

GSE164551

patientsBone marrow aspirateMultiple myelomaRefractory multiple myeloma (MM)ImmunotherapyCAR-TNACD8+ T cells0.2697814.58e-06

GSE164237

patientsPeripheral blood mononuclear cellsMelanomaAdvanced stages of melanoma ImmunotherapypembrolizumabpreCD8+ T cells-0.3249450.00e+00

GSE197268_Tisa-cel

patientsPeripheral blood mononuclear cellsAcute lymphoblastic leukemiaLarge B-cell acute lymphoblastic leukemia (B-ALL)Immunotherapytisa-cel (CAR-T)postNK cells-0.3705140.00e+00

GSE189460

patientsBone marrow aspirateMultiple myelomaMultiple myeloma (MM)Targeted therapybortezomib + melphalan + prednisolonepreNK cells-0.2766251.34e-29

GSE199333

patientsBone marrow aspirateAcute myeloid leukemiaPrimary FLT3-ITD-mutated acute myeloid leukemia (AML)Targeted therapygilteritinibpreNK cells0.3165182.60e-02

GSE175716

PDXTumor tissueLiver cancerAdvanced hepatocellular carcinomaTargeted therapysorafenibNAMalignant cells0.5033930.00e+00

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Expression of TGFBR3 in the resistant group across all datasets and cell types

check buttonRed dots represent significantly high expression in the resistant group, while blue dots represent significantly low expression in the resistant group. White dots represent that there is no significant difference in the expression of this gene between the resistant and sensitive groups. Blank represents that this cell type is not present in this dataset. (If the image exists, the user can click on it to enlarge it in a new window.)
boxplot

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Significant ligand-receptor pairs related to TGFBR3

check buttonThis table shows the significant ligand-receptor pairs related to this gene across all datasets, timepoints and conditions. (Complete files can be downloaded from the download section.)

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Known drug resistance mechanisms of this gene

check buttonThis table shows the known drug resistance mechanisms of this gene. Clicking on this gene will link to another database that displays more drug resistance-related information.

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MicroRNAs (miRNA) regulating TGFBR3

check buttonThis table shows the miRNAs with a score of more than 80 regulating this gene. (Complete files can be downloaded from the download section.)
Gene symbolmiRNAScoreGeneBank accession
TGFBR3hsa-miR-568897.8748NM_001195683
TGFBR3hsa-miR-495-3p97.8277NM_001195683
TGFBR3hsa-miR-7110-3p97.4156NM_003243
TGFBR3hsa-miR-7157-5p95.9137NM_001195683
TGFBR3hsa-miR-450095.6039NM_001195683
TGFBR3hsa-miR-1277-5p95.5492NM_001195683
TGFBR3hsa-miR-445893.9995NM_001195683
TGFBR3hsa-let-7d-5p93.9995NM_001195683
TGFBR3hsa-miR-1185-2-3p93.9408NM_003243
TGFBR3hsa-let-7f-2-3p93.9408NM_003243
TGFBR3hsa-miR-1185-1-3p93.9408NM_003243
TGFBR3hsa-miR-431093.9329NM_001195683
TGFBR3hsa-let-7f-5p93.8723NM_001195683
TGFBR3hsa-let-7e-5p93.8723NM_001195683
TGFBR3hsa-let-7b-5p93.8723NM_001195683
TGFBR3hsa-let-7a-5p93.8723NM_001195683
TGFBR3hsa-miR-98-5p93.8723NM_001195683
TGFBR3hsa-let-7i-5p93.8723NM_001195683
TGFBR3hsa-let-7g-5p93.8723NM_001195683
TGFBR3hsa-let-7c-5p93.8723NM_001195683
TGFBR3hsa-miR-7848-3p93.6204NM_003243
TGFBR3hsa-miR-548ar-3p92.9983NM_003243
TGFBR3hsa-miR-48492.8686NM_001195683
TGFBR3hsa-miR-10792.2281NM_001195683
TGFBR3hsa-miR-103a-3p92.2281NM_001195683
TGFBR3hsa-miR-6794-3p91.5838NM_003243
TGFBR3hsa-miR-101-3p91.356NM_003243
TGFBR3hsa-miR-6715b-3p91.3017NM_003243
TGFBR3hsa-miR-376c-3p91.2404NM_001195683
TGFBR3hsa-miR-3155a91.1539NM_001195683
TGFBR3hsa-miR-3155b91.1539NM_001195683
TGFBR3hsa-miR-196a-1-3p90.9558NM_001195683
TGFBR3hsa-miR-4789-5p90.7816NM_003243
TGFBR3hsa-miR-424-5p89.6091NM_001195683
TGFBR3hsa-miR-15b-5p89.6091NM_001195683
TGFBR3hsa-miR-16-5p89.6091NM_001195683
TGFBR3hsa-miR-497-5p89.6091NM_001195683
TGFBR3hsa-miR-15a-5p89.6091NM_001195683
TGFBR3hsa-miR-195-5p89.6091NM_001195683
TGFBR3hsa-miR-6838-5p89.6091NM_001195683
TGFBR3hsa-miR-132389.2959NM_003243
TGFBR3hsa-miR-7856-5p88.8008NM_003243
TGFBR3hsa-let-7b-3p87.9425NM_003243
TGFBR3hsa-miR-998587.8615NM_001195683
TGFBR3hsa-miR-27b-3p87.8615NM_001195683
TGFBR3hsa-miR-27a-3p87.8615NM_001195683
TGFBR3hsa-miR-548f-3p87.7181NM_003243
TGFBR3hsa-miR-548e-3p87.7181NM_003243
TGFBR3hsa-miR-548az-3p87.7181NM_003243
TGFBR3hsa-miR-548a-3p87.7181NM_003243
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Motifs and transcription factors (TFs) regulating TGFBR3

check buttonThis table shows the Motifs and transcription factors (TFs) regulating this gene. (Complete files can be downloaded from the download section.)
Gene symbolmotifTF_highConf
TGFBR3tfdimers__MD00302IRF7; IRF8 (directAnnotation).
TGFBR3swissregulon__hs__SPI1SPI1 (directAnnotation).
TGFBR3transfac_pro__M02269FEV (directAnnotation).
TGFBR3metacluster_2.4ZIM3; ZIM3; ZIM3; ZIM3 (directAnnotation).
TGFBR3taipale_tf_pairs__GCM1_ETV4_RTGCGGGCGGAAGTR_CAPETV4; GCM1 (directAnnotation).
TGFBR3kznf__ZFP57_Imbeault2017_OM_MEMEZFP57 (directAnnotation).
TGFBR3metacluster_135.10MBD2; MBD2; MECP2; MECP2 (directAnnotation).
TGFBR3taipale_tf_pairs__ETV5_HOXA2_RSCGGWAATKR_CAPETV5; HOXA2 (directAnnotation).
TGFBR3transfac_pro__M04861SIX5 (directAnnotation).
TGFBR3transfac_pro__M04826EP300 (directAnnotation).
TGFBR3metacluster_55.3E2F6; EGR1; NRF1; NRF1; NRF1; NRF1; NRF1; NRF1; NRF1; NRF1; NRF1; NRF1; ZBTB2; ZSCAN10 (directAnnotation). NFE2L1; NRF1; NRF1; NRF1 (inferredBy_Orthology).
TGFBR3taipale_tf_pairs__ETV5_CEBPD_NSCGGANNTTRCGYAAN_CAPCEBPD; ETV5 (directAnnotation).
TGFBR3taipale_cyt_meth__ZNF385D_NCGTCGCGACGN_eDBD_methZNF385D (directAnnotation).
TGFBR3transfac_pro__M00652NRF1 (directAnnotation).
TGFBR3transfac_pro__M04918EGR1 (directAnnotation).
TGFBR3transfac_pro__M06897ZNF789 (directAnnotation).
TGFBR3transfac_pro__M01251E2F1 (directAnnotation).
TGFBR3cisbp__M01815CEBPE (inferredBy_Orthology).
TGFBR3metacluster_11.1ZNF667 (directAnnotation).
TGFBR3metacluster_20.5DLX1; DLX4; DLX4 (directAnnotation).
TGFBR3cisbp__M00282PHOX2B (directAnnotation).
TGFBR3taipale_tf_pairs__FOXO1_ELF1_NNGAAAACCGAANM_CAPELF1; FOXO1 (directAnnotation).
TGFBR3transfac_pro__M06086ZNF17 (directAnnotation).
TGFBR3transfac_pro__M06832PEG3 (directAnnotation).
TGFBR3transfac_pro__M06688ZKSCAN7 (directAnnotation).
TGFBR3transfac_pro__M06249ZNF616 (directAnnotation).
TGFBR3swissregulon__hs__FOXO3FOXO3 (directAnnotation).
TGFBR3metacluster_7.7SP2 (directAnnotation). KLF16 (inferredBy_Orthology).
TGFBR3taipale_tf_pairs__PBX4_HOXA10_CCATAAATCA_CAPHOXA10; PBX4 (directAnnotation).
TGFBR3metacluster_46.4CEBPA; CEBPA; CEBPA; CEBPA; CEBPA; CEBPA; CEBPA; CEBPA; CEBPA; CEBPA; CEBPA; CEBPA; CEBPA; CEBPA; CEBPA; CEBPB; CEBPB; CEBPB; CEBPB; CEBPB; CEBPB; CEBPB; CEBPB; CEBPB; CEBPB; CEBPB; CEBPB; CEBPB; CEBPB; CEBPB; CEBPB; CEBPB; CEBPB; CEBPB; CEBPB; CEBPB; CEBPD; CEBPD; CEBPD; CEBPD; CEBPD; CEBPD; CEBPD; CEBPD; CEBPD; CEBPD; CEBPE; CEBPE; CEBPE; CEBPE; CEBPE; CEBPE; CEBPE; CEBPE; CEBPE; CEBPE; CEBPG; CEBPG; CEBPG; CEBPG; CEBPG; CEBPG; CEBPG; CEBPG; CEBPG; CEBPG; CEBPG; DBP; DBP; EP300; GATAD2A; HES2 (directAnnotation). CEBPA; CEBPA; CEBPA; CEBPA; CEBPA; CEBPA; CEBPA; CEBPA; CEBPB; CEBPB; CEBPB; CEBPB; CEBPB; CEBPB; CEBPB; CEBPB; CEBPB; CEBPB; CEBPB; CEBPB; CEBPB; CEBPB; CEBPB; CEBPB; CEBPD; CEBPD; CEBPD; CEBPD; CEBPD; CEBPE; CEBPE; CEBPE; CEBPG; CEBPG; HLF; HLF (inferredBy_Orthology).
TGFBR3metacluster_198.3ZFP64 (directAnnotation).
TGFBR3cisbp__M00341PAX6 (directAnnotation).
TGFBR3cisbp__M00968MTF2 (directAnnotation).
TGFBR3transfac_pro__M00716ZBTB14 (directAnnotation).
TGFBR3transfac_pro__M04893TAF1 (directAnnotation).
TGFBR3metacluster_35.2EGR1; ELF1; ELF1; ELF1; ELF2; ELF2; ELF3; ELF4; ELF4; ELK1; ELK3; ELK4; ERG; ETS1; ETS1; ETS2; ETV1; ETV1; ETV5; ETV5; ETV6; FLI1; FLI1; GABPA; GABPA; GABPA; GABPB1; GABPB1; GABPB1; ZBTB7A (directAnnotation). ELF2; ELF2; ERG; ERG; ETS2; FLI1; GABPA; IKZF3; SPIC (inferredBy_Orthology).
TGFBR3transfac_pro__M04916TAF1 (directAnnotation).
TGFBR3transfac_pro__M02089E2F3 (directAnnotation).
TGFBR3transfac_pro__M04817ZBTB33 (directAnnotation).
TGFBR3transfac_pro__M07310SP5 (directAnnotation).
TGFBR3flyfactorsurvey__Mad_FlyReg_FBgn0011648SMAD9 (inferredBy_Orthology).
TGFBR3hdpi__NRLNRL (directAnnotation).
TGFBR3kznf__ZNF548_Imbeault2017_RP_RCADEZNF548 (directAnnotation).
TGFBR3hdpi__HIP2UBE2K (directAnnotation).
TGFBR3transfac_pro__M07387ZBTB7A (directAnnotation).
TGFBR3transfac_pro__M00803E2F1; E2F3; E2F4; TFDP1 (directAnnotation).
TGFBR3transfac_pro__M01783SP2 (directAnnotation).
TGFBR3metacluster_61.1DEAF1; DEAF1 (directAnnotation).
TGFBR3cisbp__M07938E2F1 (directAnnotation).
TGFBR3metacluster_7.13ZFX (directAnnotation).
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Acts as a transcription factor

check buttonThis table shows that this differential gene acts as a transcription factor.

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Acts as a drug target

check buttonThis table shows that this differential gene acts as a drug target.



1"Sun X, Zhang Y, Li H, Zhou Y, Shi S, Chen Z, He X, Zhang H, Li F, Yin J, Mou M, Wang Y, Qiu Y, Zhu F. DRESIS: the first comprehensive landscape of drug resistance information. Nucleic Acids Res. 2023 Jan 6;51(D1):D1263-D1275. doi: 10.1093/nar/gkac812. PMID: 36243960; PMCID: PMC9825618."
2"Wishart DS, Feunang YD, Guo AC, Lo EJ, Marcu A, Grant JR, Sajed T, Johnson D, Li C, Sayeeda Z, Assempour N, Iynkkaran I, Liu Y, Maciejewski A, Gale N, Wilson A, Chin L, Cummings R, Le D, Pon A, Knox C, Wilson M. DrugBank 5.0: a major update to the DrugBank database for 2018. Nucleic Acids Res. 2018 Jan 4;46(D1):D1074-D1082. doi: 10.1093/nar/gkx1037. PMID: 29126136; PMCID: PMC5753335."