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Center for Computational Systems Medicine
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Gene summary

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Datasets with differential expression of this gene

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Expression of this gene in the resistant group across all datasets and cell types

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Significant ligand-receptor pairs related to this gene (This gene does not contain this module)

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Known drug resistance mechanisms of this gene (This gene does not contain this module)

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MicroRNAs (miRNAs) regulating this gene

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Motifs and transcription factors (TFs) regulating this gene

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Acts as a transcription factor (This gene does not contain this module)

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Acts as a drug target< (This gene does not contain this module)

Gene: RCOR1

Summary for RCOR1

Gene informationGene symbol

RCOR1

Ensembl ID

ENSG00000089902

Entrez ID

23186

Gene nameREST corepressor 1
SynonymsCOREST|KIAA0071|RCOR
Gene typeprotein_coding
UniProtAcc

Q9UKL0


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Dataset with differentially expressed gene: RCOR1

check buttonDifferentially expression genes between the resistant and sensitive groups. A positive avg_log2FC represents significantly high expression in the resistant group, while a negative avg_log2FC represents significantly low expression in the resistant group.
DatasetSourceTissueCancer type level1Cancer type level2Drug typeRegimenTimepointCell typeavg_log2FCp_val_adj

GSE169246_PacBlood

patientsPeripheral blood mononuclear cellsBreast cancerAdvanced triple-negative breast cancer (TNBC)ChemotherapypaclitaxelprecDCs0.255964.70e-04

GSE175716

PDXTumor tissueLiver cancerAdvanced hepatocellular carcinomaTargeted therapysorafenibNAMalignant cells-0.3866772.14e-39

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Expression of RCOR1 in the resistant group across all datasets and cell types

check buttonRed dots represent significantly high expression in the resistant group, while blue dots represent significantly low expression in the resistant group. White dots represent that there is no significant difference in the expression of this gene between the resistant and sensitive groups. Blank represents that this cell type is not present in this dataset. (If the image exists, the user can click on it to enlarge it in a new window.)
boxplot

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Significant ligand-receptor pairs related to RCOR1

check buttonThis table shows the significant ligand-receptor pairs related to this gene across all datasets, timepoints and conditions. (Complete files can be downloaded from the download section.)

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Known drug resistance mechanisms of this gene

check buttonThis table shows the known drug resistance mechanisms of this gene. Clicking on this gene will link to another database that displays more drug resistance-related information.

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MicroRNAs (miRNA) regulating RCOR1

check buttonThis table shows the miRNAs with a score of more than 80 regulating this gene. (Complete files can be downloaded from the download section.)
Gene symbolmiRNAScoreGeneBank accession
RCOR1hsa-miR-3529-3p99.7912NM_015156
RCOR1hsa-miR-196a-1-3p98.3553NM_015156
RCOR1hsa-miR-6734-3p97.5168NM_015156
RCOR1hsa-miR-606997.4481NM_015156
RCOR1hsa-miR-3692-3p97.4149NM_015156
RCOR1hsa-miR-22-3p96.2344NM_015156
RCOR1hsa-miR-5011-5p95.9857NM_015156
RCOR1hsa-miR-371495.7173NM_015156
RCOR1hsa-miR-1910-3p94.9567NM_015156
RCOR1hsa-miR-6511a-5p94.9567NM_015156
RCOR1hsa-miR-129794.5576NM_015156
RCOR1hsa-miR-656-5p94.4989NM_015156
RCOR1hsa-miR-570094.2743NM_015156
RCOR1hsa-miR-3158-5p93.851NM_015156
RCOR1hsa-miR-471993.4838NM_015156
RCOR1hsa-miR-428293.3441NM_015156
RCOR1hsa-miR-26b-5p93.343NM_015156
RCOR1hsa-miR-26a-5p93.343NM_015156
RCOR1hsa-miR-44892.5095NM_015156
RCOR1hsa-miR-532-5p92.3457NM_015156
RCOR1hsa-miR-446591.7433NM_015156
RCOR1hsa-miR-153-3p90.7659NM_015156
RCOR1hsa-miR-545-3p89.2375NM_015156
RCOR1hsa-miR-548ah-5p89.1772NM_015156
RCOR1hsa-miR-360989.1772NM_015156
RCOR1hsa-miR-218-5p89.0805NM_015156
RCOR1hsa-miR-5681b88.9866NM_015156
RCOR1hsa-miR-4694-3p88.9769NM_015156
RCOR1hsa-miR-513b-5p88.4335NM_015156
RCOR1hsa-miR-80288.2481NM_015156
RCOR1hsa-miR-6811-5p87.7173NM_015156
RCOR1hsa-miR-197-3p87.6629NM_015156
RCOR1hsa-miR-4753-5p87.4309NM_015156
RCOR1hsa-miR-6511b-5p87.259NM_015156
RCOR1hsa-miR-6501-5p86.8021NM_015156
RCOR1hsa-miR-506-3p86.0966NM_015156
RCOR1hsa-miR-124-3p86.0966NM_015156
RCOR1hsa-miR-64185.5283NM_015156
RCOR1hsa-miR-3617-5p85.5283NM_015156
RCOR1hsa-miR-1211985.1681NM_015156
RCOR1hsa-miR-190a-5p85.0451NM_015156
RCOR1hsa-miR-190b-5p85.0451NM_015156
RCOR1hsa-miR-442284.7028NM_015156
RCOR1hsa-miR-5581-5p84.6702NM_015156
RCOR1hsa-miR-429784.6702NM_015156
RCOR1hsa-miR-451584.3126NM_015156
RCOR1hsa-miR-6835-3p84.274NM_015156
RCOR1hsa-miR-4728-3p84.2537NM_015156
RCOR1hsa-miR-55883.9477NM_015156
RCOR1hsa-miR-605-3p83.457NM_015156
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Motifs and transcription factors (TFs) regulating RCOR1

check buttonThis table shows the Motifs and transcription factors (TFs) regulating this gene. (Complete files can be downloaded from the download section.)
Gene symbolmotifTF_highConf
RCOR1metacluster_135.11NR2C2 (directAnnotation).
RCOR1metacluster_135.10MBD2; MBD2; MECP2; MECP2 (directAnnotation).
RCOR1tfdimers__MD00038TFAP2C (directAnnotation).
RCOR1metacluster_144.3ZNF704; ZNF704 (directAnnotation).
RCOR1metacluster_7.13ZFX (directAnnotation).
RCOR1kznf__ZNF730_Imbeault2017_RP_RCADEZNF730 (directAnnotation).
RCOR1cisbp__M00968MTF2 (directAnnotation).
RCOR1metacluster_155.23BCL11B; ZNF711; ZNF711 (directAnnotation). ZFY (inferredBy_Orthology).
RCOR1metacluster_160.20JUND; PRDM15 (directAnnotation).
RCOR1cisbp__M00341PAX6 (directAnnotation).
RCOR1metacluster_198.3ZFP64 (directAnnotation).
RCOR1metacluster_141.5NR3C1; THAP1; YY1; YY1; YY1; YY1; YY1; YY1; YY1; YY1; YY1; YY1; YY1; YY1; YY2; YY2; ZNF597 (directAnnotation). YY1; YY1; YY1; YY2; ZFP42 (inferredBy_Orthology).
RCOR1metacluster_151.1KAT7; PML; SMAD5; TAF1; ZFP37; ZGPAT; ZNF519; ZNF519; ZNF571; ZNF770; ZNF770; ZNF770; ZSCAN22; ZSCAN22 (directAnnotation).
RCOR1jaspar__MA0185.1DEAF1 (inferredBy_Orthology).
RCOR1metacluster_61.1DEAF1; DEAF1 (directAnnotation).
RCOR1cisbp__M00788ZFY (inferredBy_Orthology).
RCOR1kznf__ZNF213_Schmitges2016_RCADEZNF213 (directAnnotation).
RCOR1metacluster_175.1ZNF283 (directAnnotation).
RCOR1hdpi__ZNF304ZNF304 (directAnnotation).
RCOR1transfac_pro__M02844BCL6B (inferredBy_Orthology).
RCOR1metacluster_125.2TFAP2A; TFAP2A; TFAP2A; TFAP2A; TFAP2A; TFAP2A; TFAP2A; TFAP2A; TFAP2A; TFAP2A; TFAP2A; TFAP2A; TFAP2A; TFAP2A; TFAP2A; TFAP2A; TFAP2A; TFAP2A; TFAP2A; TFAP2A; TFAP2B; TFAP2B; TFAP2B; TFAP2B; TFAP2B; TFAP2B; TFAP2B; TFAP2B; TFAP2C; TFAP2C; TFAP2C; TFAP2C; TFAP2C; TFAP2C; TFAP2C; TFAP2C; TFAP2C; TFAP2C; TFAP2C; TFAP2C; TFAP2C; TFAP2C; TFAP2D; TFAP2D; TFAP2D; TFAP2E; TFAP2E; TFAP2E; TFAP2E; TFAP2E; TFAP2E; ZNF611; ZNF611 (directAnnotation). TFAP2A; TFAP2A; TFAP2A; TFAP2A; TFAP2A; TFAP2A; TFAP2A; TFAP2A; TFAP2A; TFAP2A; TFAP2A; TFAP2B; TFAP2B; TFAP2B; TFAP2B; TFAP2B; TFAP2B; TFAP2B; TFAP2B; TFAP2B; TFAP2C; TFAP2C; TFAP2C; TFAP2C; TFAP2C; TFAP2C; TFAP2C; TFAP2C; TFAP2C; TFAP2C; TFAP2D; TFAP2D; TFAP2D; TFAP2D; TFAP2D; TFAP2D; TFAP2E; TFAP2E; TFAP2E; TFAP2E; TFAP2E; TFAP2E; TFAP2E (inferredBy_Orthology).
RCOR1metacluster_133.1ZNF304; ZNF304; ZSCAN22 (directAnnotation).
RCOR1transfac_pro__M01199TRIM28 (directAnnotation).
RCOR1kznf__ZNF682_Isakova2017_SMiLE-seqZNF682 (directAnnotation).
RCOR1metacluster_151.2ZNF23 (directAnnotation).
RCOR1transfac_public__M00189TFAP2A; TFAP2B; TFAP2C (directAnnotation).
RCOR1transfac_pro__M01219SP1 (directAnnotation). SP3 (inferredBy_Orthology).
RCOR1transfac_pro__M03806ZBTB7C (directAnnotation).
RCOR1transfac_pro__M00915TFAP2A; TFAP2B; TFAP2C (directAnnotation).
RCOR1hdpi__GTF3C2GTF3C2 (directAnnotation).
RCOR1kznf__ZNF441_Imbeault2017_RP_RCADEZNF441 (directAnnotation).
RCOR1hdpi__NRLNRL (directAnnotation).
RCOR1tfdimers__MD00483ZBTB14 (directAnnotation).
RCOR1metacluster_126.7CTCF; ZFY; ZSCAN30 (directAnnotation).
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Acts as a transcription factor

check buttonThis table shows that this differential gene acts as a transcription factor.

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Acts as a drug target

check buttonThis table shows that this differential gene acts as a drug target.



1"Sun X, Zhang Y, Li H, Zhou Y, Shi S, Chen Z, He X, Zhang H, Li F, Yin J, Mou M, Wang Y, Qiu Y, Zhu F. DRESIS: the first comprehensive landscape of drug resistance information. Nucleic Acids Res. 2023 Jan 6;51(D1):D1263-D1275. doi: 10.1093/nar/gkac812. PMID: 36243960; PMCID: PMC9825618."
2"Wishart DS, Feunang YD, Guo AC, Lo EJ, Marcu A, Grant JR, Sajed T, Johnson D, Li C, Sayeeda Z, Assempour N, Iynkkaran I, Liu Y, Maciejewski A, Gale N, Wilson A, Chin L, Cummings R, Le D, Pon A, Knox C, Wilson M. DrugBank 5.0: a major update to the DrugBank database for 2018. Nucleic Acids Res. 2018 Jan 4;46(D1):D1074-D1082. doi: 10.1093/nar/gkx1037. PMID: 29126136; PMCID: PMC5753335."