DRMref Logo

Home

Download

Statistics

Landscape

Help

Contact

Center for Computational Systems Medicine
leaf

Gene summary

leaf

Datasets with differential expression of this gene

leaf

Expression of this gene in the resistant group across all datasets and cell types

leaf

Significant ligand-receptor pairs related to this gene (This gene does not contain this module)

leaf

Known drug resistance mechanisms of this gene

leaf

MicroRNAs (miRNAs) regulating this gene

leaf

Motifs and transcription factors (TFs) regulating this gene

leaf

Acts as a transcription factor (This gene does not contain this module)

leaf

Acts as a drug target

Gene: PPP3CA

Summary for PPP3CA

Gene informationGene symbol

PPP3CA

Ensembl ID

ENSG00000138814

Entrez ID

5530

Gene nameprotein phosphatase 3 catalytic subunit alpha
SynonymsCALN|CALNA|CNA1|PPP2B
Gene typeprotein_coding
UniProtAcc

Q08209


Top

Dataset with differentially expressed gene: PPP3CA

check buttonDifferentially expression genes between the resistant and sensitive groups. A positive avg_log2FC represents significantly high expression in the resistant group, while a negative avg_log2FC represents significantly low expression in the resistant group.
DatasetSourceTissueCancer type level1Cancer type level2Drug typeRegimenTimepointCell typeavg_log2FCp_val_adj

GSE169246_PacBlood

patientsPeripheral blood mononuclear cellsBreast cancerAdvanced triple-negative breast cancer (TNBC)ChemotherapypaclitaxelpreB cells0.2593871.49e-41

GSE169246_PacTissue

patientsTumor tissueBreast cancerAdvanced triple-negative breast cancer (TNBC)ChemotherapypaclitaxelpreB cells0.278166.67e-16

GSE139386

H3122 cell lineCell lineLung cancerEML4-ALK fusion-positive non-small cell lung cancer (NSCLC)Targeted therapyceritinibNAMalignant cells-0.414090.00e+00

GSE168668

LNCaP cell lineCell lineProstate cancerProstate cancerTargeted therapyenzalutamideNAMalignant cells-0.800130.00e+00

GSE108397

451Lu cell lineCell lineMelanomaMelanomaTargeted therapyPLX-4720NAMalignant cells-0.4028410.00e+00

GSE175716

PDXTumor tissueLiver cancerAdvanced hepatocellular carcinomaTargeted therapysorafenibNAMalignant cells-0.5058191.90e-28

GSE164897_VemTra

A375 cell lineCell lineMelanomaB+E2:E57RAFV600E-mutant melanomaTargeted therapyvemurafenib + trametinibNAMalignant cells0.6359030.00e+00

Top

Expression of PPP3CA in the resistant group across all datasets and cell types

check buttonRed dots represent significantly high expression in the resistant group, while blue dots represent significantly low expression in the resistant group. White dots represent that there is no significant difference in the expression of this gene between the resistant and sensitive groups. Blank represents that this cell type is not present in this dataset. (If the image exists, the user can click on it to enlarge it in a new window.)
boxplot

Top

Significant ligand-receptor pairs related to PPP3CA

check buttonThis table shows the significant ligand-receptor pairs related to this gene across all datasets, timepoints and conditions. (Complete files can be downloaded from the download section.)

Top

Known drug resistance mechanisms of this gene

check buttonThis table shows the known drug resistance mechanisms of this gene. Clicking on this gene will link to another database that displays more drug resistance-related information.
Gene symbolMechanism

PPP3CA

Unusual Activation of Pro-survival Pathway
Page: 1

Top

MicroRNAs (miRNA) regulating PPP3CA

check buttonThis table shows the miRNAs with a score of more than 80 regulating this gene. (Complete files can be downloaded from the download section.)
Gene symbolmiRNAScoreGeneBank accession
PPP3CAhsa-miR-335-3p98.4273NM_000944
PPP3CAhsa-miR-5195-3p98.1698NM_000944
PPP3CAhsa-miR-145-5p98.1698NM_000944
PPP3CAhsa-miR-360998.0649NM_001130691
PPP3CAhsa-miR-548ah-5p98.0649NM_001130691
PPP3CAhsa-miR-524-5p97.4392NM_000944
PPP3CAhsa-miR-520d-5p97.4392NM_000944
PPP3CAhsa-miR-95-5p97.0121NM_001130691
PPP3CAhsa-miR-5582-3p96.8538NM_001130691
PPP3CAhsa-miR-391096.6783NM_000944
PPP3CAhsa-miR-548an96.3111NM_000944
PPP3CAhsa-miR-548az-5p95.9245NM_001130691
PPP3CAhsa-miR-548t-5p95.9245NM_001130691
PPP3CAhsa-miR-153-5p95.6914NM_000944
PPP3CAhsa-let-7f-1-3p95.082NM_000944
PPP3CAhsa-let-7b-3p95.082NM_000944
PPP3CAhsa-miR-98-3p95.082NM_000944
PPP3CAhsa-let-7a-3p95.082NM_000944
PPP3CAhsa-miR-3613-3p94.6404NM_001130691
PPP3CAhsa-miR-7-1-3p93.9825NM_001130691
PPP3CAhsa-miR-7-2-3p93.9825NM_001130691
PPP3CAhsa-miR-548g-3p93.7903NM_000944
PPP3CAhsa-miR-770-5p93.6583NM_000944
PPP3CAhsa-miR-4795-3p93.5082NM_001130691
PPP3CAhsa-miR-312393.3121NM_001130691
PPP3CAhsa-miR-4712-5p92.5996NM_000944
PPP3CAhsa-miR-208b-5p91.6923NM_000944
PPP3CAhsa-miR-208a-5p91.6923NM_000944
PPP3CAhsa-miR-205391.6317NM_001130691
PPP3CAhsa-miR-5589-3p91.5686NM_000944
PPP3CAhsa-miR-3160-5p91.2803NM_000944
PPP3CAhsa-miR-1213691.277NM_000944
PPP3CAhsa-miR-548al90.9067NM_000944
PPP3CAhsa-miR-4445-3p90.9067NM_000944
PPP3CAhsa-miR-33a-3p90.8587NM_000944
PPP3CAhsa-miR-4666a-3p90.7571NM_000944
PPP3CAhsa-miR-3180-5p90.7196NM_000944
PPP3CAhsa-miR-130390.4532NM_001130691
PPP3CAhsa-miR-30c-5p90.4117NM_000944
PPP3CAhsa-miR-30e-5p90.4117NM_000944
PPP3CAhsa-miR-30b-5p90.4117NM_000944
PPP3CAhsa-miR-30d-5p90.4117NM_000944
PPP3CAhsa-miR-30a-5p90.4117NM_000944
PPP3CAhsa-miR-314290.3608NM_000944
PPP3CAhsa-miR-314890.2933NM_001130691
PPP3CAhsa-miR-1245b-5p89.7605NM_000944
PPP3CAhsa-miR-548k88.4502NM_000944
PPP3CAhsa-miR-805488.4502NM_000944
PPP3CAhsa-miR-548av-5p88.4502NM_000944
PPP3CAhsa-miR-5002-3p88.3929NM_000944
Page: 1 2 3

Top

Motifs and transcription factors (TFs) regulating PPP3CA

check buttonThis table shows the Motifs and transcription factors (TFs) regulating this gene. (Complete files can be downloaded from the download section.)
Gene symbolmotifTF_highConf
PPP3CAmetacluster_7.13ZFX (directAnnotation).
PPP3CAmetacluster_151.2ZNF23 (directAnnotation).
PPP3CAmetacluster_170.2KLF1; KLF10; KLF10; KLF11; KLF11; KLF11; KLF12; KLF12; KLF14; KLF15; KLF17; KLF2; KLF5; KLF7; KLF7; KLF8; MAZ; MAZ; PATZ1; SP1; SP1; SP1; SP2; SP2; SP2; SP2; SP2; SP2; SP2; SP2; SP4; SP4; SP5; SP6; SP7; SP8; SP9; ZNF281 (directAnnotation). E2F1; E2F4; KLF10; KLF13; KLF14; KLF17; KLF2; KLF7; SP1; SP1; SP3; SP4; SP5; SP6; SP7 (inferredBy_Orthology).
PPP3CAtransfac_pro__M05479ZNF580 (directAnnotation).
PPP3CAmetacluster_155.23BCL11B; ZNF711; ZNF711 (directAnnotation). ZFY (inferredBy_Orthology).
PPP3CAkznf__ZNF783_Imbeault2017_OM_MEMEZNF783 (directAnnotation).
PPP3CAmetacluster_144.3ZNF704; ZNF704 (directAnnotation).
PPP3CAtransfac_pro__M05628ZNF735 (directAnnotation).
PPP3CAhomer__TWVGGTCCGC_HINFPHINFP (directAnnotation).
PPP3CAmetacluster_135.10MBD2; MBD2; MECP2; MECP2 (directAnnotation).
PPP3CAjaspar__MA0079.5SP1 (directAnnotation).
PPP3CAtaipale_tf_pairs__GCM1_ETV1_RTRNNGGCGGAAGTN_CAPETV1; GCM1 (directAnnotation).
PPP3CAmetacluster_55.3E2F6; EGR1; NRF1; NRF1; NRF1; NRF1; NRF1; NRF1; NRF1; NRF1; NRF1; NRF1; ZBTB2; ZSCAN10 (directAnnotation). NFE2L1; NRF1; NRF1; NRF1 (inferredBy_Orthology).
PPP3CAdbtfbs__E2F8_representative_N1E2F8 (directAnnotation).
PPP3CAtransfac_pro__M04950EGR1 (directAnnotation).
PPP3CAmetacluster_15.3E2F1; E2F6; E2F8; E2F8; TFDP1 (directAnnotation). E2F3 (inferredBy_Orthology).
PPP3CAtaipale_cyt_meth__ZNF385D_NCGTCGCGACGN_eDBD_methZNF385D (directAnnotation).
PPP3CAtaipale_tf_pairs__ERF_HES7_NNCACGTGNNNNCCGGAANN_CAP_reprERF; HES7 (directAnnotation).
PPP3CAtaipale_tf_pairs__E2F1_ELK1_SGCGCNNNNNCGGAAGN_CAP_reprE2F1; ELK1 (directAnnotation).
PPP3CAtransfac_pro__M00652NRF1 (directAnnotation).
PPP3CAtaipale_tf_pairs__E2F1_HES7_RRCRCGYGYNNNNSGCGCSN_CAP_reprE2F1; HES7 (directAnnotation).
PPP3CAtransfac_pro__M04866HDAC2 (directAnnotation).
PPP3CAjaspar__MA1122.1TFDP1 (directAnnotation).
PPP3CAswissregulon__hs__ZBTB14ZBTB14 (directAnnotation).
PPP3CAmetacluster_34.3EGR1; ETS1; SETDB1; SIX5; SIX5; ZNF143; ZNF76 (directAnnotation).
PPP3CAtaipale_tf_pairs__ETV2_HES7_RSCGGAANNNNNNCACGTGNN_CAP_reprETV2; HES7 (directAnnotation).
PPP3CAmetacluster_135.11NR2C2 (directAnnotation).
PPP3CAkznf__ZNF730_Imbeault2017_RP_RCADEZNF730 (directAnnotation).
PPP3CAcisbp__M00968MTF2 (directAnnotation).
PPP3CAmetacluster_160.20JUND; PRDM15 (directAnnotation).
PPP3CAcisbp__M00341PAX6 (directAnnotation).
PPP3CAmetacluster_141.5NR3C1; THAP1; YY1; YY1; YY1; YY1; YY1; YY1; YY1; YY1; YY1; YY1; YY1; YY1; YY2; YY2; ZNF597 (directAnnotation). YY1; YY1; YY1; YY2; ZFP42 (inferredBy_Orthology).
PPP3CAmetacluster_151.1KAT7; PML; SMAD5; TAF1; ZFP37; ZGPAT; ZNF519; ZNF519; ZNF571; ZNF770; ZNF770; ZNF770; ZSCAN22; ZSCAN22 (directAnnotation).
PPP3CAjaspar__MA0185.1DEAF1 (inferredBy_Orthology).
PPP3CAmetacluster_61.1DEAF1; DEAF1 (directAnnotation).
PPP3CAcisbp__M00788ZFY (inferredBy_Orthology).
PPP3CAkznf__ZNF213_Schmitges2016_RCADEZNF213 (directAnnotation).
PPP3CAhdpi__ZNF304ZNF304 (directAnnotation).
PPP3CAtransfac_pro__M02844BCL6B (inferredBy_Orthology).
PPP3CAmetacluster_125.2TFAP2A; TFAP2A; TFAP2A; TFAP2A; TFAP2A; TFAP2A; TFAP2A; TFAP2A; TFAP2A; TFAP2A; TFAP2A; TFAP2A; TFAP2A; TFAP2A; TFAP2A; TFAP2A; TFAP2A; TFAP2A; TFAP2A; TFAP2A; TFAP2B; TFAP2B; TFAP2B; TFAP2B; TFAP2B; TFAP2B; TFAP2B; TFAP2B; TFAP2C; TFAP2C; TFAP2C; TFAP2C; TFAP2C; TFAP2C; TFAP2C; TFAP2C; TFAP2C; TFAP2C; TFAP2C; TFAP2C; TFAP2C; TFAP2C; TFAP2D; TFAP2D; TFAP2D; TFAP2E; TFAP2E; TFAP2E; TFAP2E; TFAP2E; TFAP2E; ZNF611; ZNF611 (directAnnotation). TFAP2A; TFAP2A; TFAP2A; TFAP2A; TFAP2A; TFAP2A; TFAP2A; TFAP2A; TFAP2A; TFAP2A; TFAP2A; TFAP2B; TFAP2B; TFAP2B; TFAP2B; TFAP2B; TFAP2B; TFAP2B; TFAP2B; TFAP2B; TFAP2C; TFAP2C; TFAP2C; TFAP2C; TFAP2C; TFAP2C; TFAP2C; TFAP2C; TFAP2C; TFAP2C; TFAP2D; TFAP2D; TFAP2D; TFAP2D; TFAP2D; TFAP2D; TFAP2E; TFAP2E; TFAP2E; TFAP2E; TFAP2E; TFAP2E; TFAP2E (inferredBy_Orthology).
PPP3CAmetacluster_133.1ZNF304; ZNF304; ZSCAN22 (directAnnotation).
PPP3CAtransfac_pro__M01199TRIM28 (directAnnotation).
PPP3CAtransfac_public__M00189TFAP2A; TFAP2B; TFAP2C (directAnnotation).
PPP3CAtransfac_pro__M01219SP1 (directAnnotation). SP3 (inferredBy_Orthology).
PPP3CAtransfac_pro__M03806ZBTB7C (directAnnotation).
PPP3CAtransfac_pro__M00915TFAP2A; TFAP2B; TFAP2C (directAnnotation).
PPP3CAtransfac_pro__M06135ZNF28 (directAnnotation).
PPP3CAtaipale_cyt_meth__ZBTB2_NTTTMCGGTWAN_eDBDZBTB2 (directAnnotation).
PPP3CAmetacluster_19.1GMEB2; GMEB2; GMEB2 (directAnnotation).
PPP3CAtaipale_tf_pairs__GCM1_ELK1_RTGCGGGCGGAAGTN_CAP_1ELK1; GCM1 (directAnnotation).
Page: 1 2

Top

Acts as a transcription factor

check buttonThis table shows that this differential gene acts as a transcription factor.

Top

Acts as a drug target

check buttonThis table shows that this differential gene acts as a drug target.
Target nameDrug nameDrug IDDrug type
PPP3CA"Myristic acid"

DB08231

small molecule
Page: 1




1"Sun X, Zhang Y, Li H, Zhou Y, Shi S, Chen Z, He X, Zhang H, Li F, Yin J, Mou M, Wang Y, Qiu Y, Zhu F. DRESIS: the first comprehensive landscape of drug resistance information. Nucleic Acids Res. 2023 Jan 6;51(D1):D1263-D1275. doi: 10.1093/nar/gkac812. PMID: 36243960; PMCID: PMC9825618."
2"Wishart DS, Feunang YD, Guo AC, Lo EJ, Marcu A, Grant JR, Sajed T, Johnson D, Li C, Sayeeda Z, Assempour N, Iynkkaran I, Liu Y, Maciejewski A, Gale N, Wilson A, Chin L, Cummings R, Le D, Pon A, Knox C, Wilson M. DrugBank 5.0: a major update to the DrugBank database for 2018. Nucleic Acids Res. 2018 Jan 4;46(D1):D1074-D1082. doi: 10.1093/nar/gkx1037. PMID: 29126136; PMCID: PMC5753335."