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Center for Computational Systems Medicine
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Gene summary

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Datasets with differential expression of this gene

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Expression of this gene in the resistant group across all datasets and cell types

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Significant ligand-receptor pairs related to this gene (This gene does not contain this module)

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Known drug resistance mechanisms of this gene (This gene does not contain this module)

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MicroRNAs (miRNAs) regulating this gene

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Motifs and transcription factors (TFs) regulating this gene

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Acts as a transcription factor (This gene does not contain this module)

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Acts as a drug target< (This gene does not contain this module)

Gene: PAFAH1B1

Summary for PAFAH1B1

Gene informationGene symbol

PAFAH1B1

Ensembl ID

ENSG00000007168

Entrez ID

5048

Gene nameplatelet activating factor acetylhydrolase 1b regulatory subunit 1
SynonymsLIS1|MDCR|MDS|NudF|PAFAH
Gene typeprotein_coding
UniProtAcc

NA


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Dataset with differentially expressed gene: PAFAH1B1

check buttonDifferentially expression genes between the resistant and sensitive groups. A positive avg_log2FC represents significantly high expression in the resistant group, while a negative avg_log2FC represents significantly low expression in the resistant group.
DatasetSourceTissueCancer type level1Cancer type level2Drug typeRegimenTimepointCell typeavg_log2FCp_val_adj

GSE163836

FCIBC02 cell lineCell lineBreast cancerInflammatory breast cancerChemotherapypaclitaxelNAMalignant cells-0.351490.00e+00

GSE175716

PDXTumor tissueLiver cancerAdvanced hepatocellular carcinomaTargeted therapysorafenibNAMalignant cells-0.2733351.83e-09

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Expression of PAFAH1B1 in the resistant group across all datasets and cell types

check buttonRed dots represent significantly high expression in the resistant group, while blue dots represent significantly low expression in the resistant group. White dots represent that there is no significant difference in the expression of this gene between the resistant and sensitive groups. Blank represents that this cell type is not present in this dataset. (If the image exists, the user can click on it to enlarge it in a new window.)
boxplot

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Significant ligand-receptor pairs related to PAFAH1B1

check buttonThis table shows the significant ligand-receptor pairs related to this gene across all datasets, timepoints and conditions. (Complete files can be downloaded from the download section.)

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Known drug resistance mechanisms of this gene

check buttonThis table shows the known drug resistance mechanisms of this gene. Clicking on this gene will link to another database that displays more drug resistance-related information.

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MicroRNAs (miRNA) regulating PAFAH1B1

check buttonThis table shows the miRNAs with a score of more than 80 regulating this gene. (Complete files can be downloaded from the download section.)
Gene symbolmiRNAScoreGeneBank accession
PAFAH1B1hsa-miR-364699.5396NM_000430
PAFAH1B1hsa-miR-6838-5p96.8369NM_000430
PAFAH1B1hsa-miR-497-5p95.7044NM_000430
PAFAH1B1hsa-miR-59295.6926NM_000430
PAFAH1B1hsa-miR-195-5p95.6025NM_000430
PAFAH1B1hsa-miR-15b-5p95.6025NM_000430
PAFAH1B1hsa-miR-15a-5p95.6025NM_000430
PAFAH1B1hsa-miR-16-5p95.6025NM_000430
PAFAH1B1hsa-miR-366295.1782NM_000430
PAFAH1B1hsa-miR-182-5p95.1675NM_000430
PAFAH1B1hsa-miR-806495.1334NM_000430
PAFAH1B1hsa-miR-424-5p95.0845NM_000430
PAFAH1B1hsa-miR-150-3p94.9591NM_000430
PAFAH1B1hsa-miR-429794.5097NM_000430
PAFAH1B1hsa-miR-16-2-3p93.7432NM_000430
PAFAH1B1hsa-miR-195-3p93.7432NM_000430
PAFAH1B1hsa-miR-1207-3p93.4967NM_000430
PAFAH1B1hsa-miR-505-3p93.3765NM_000430
PAFAH1B1hsa-miR-6510-5p93.2958NM_000430
PAFAH1B1hsa-miR-144-3p92.9531NM_000430
PAFAH1B1hsa-miR-806292.8737NM_000430
PAFAH1B1hsa-miR-4697-3p92.665NM_000430
PAFAH1B1hsa-miR-314892.559NM_000430
PAFAH1B1hsa-miR-4666a-3p92.302NM_000430
PAFAH1B1hsa-miR-431991.9936NM_000430
PAFAH1B1hsa-miR-5003-3p91.9756NM_000430
PAFAH1B1hsa-miR-96-5p91.5971NM_000430
PAFAH1B1hsa-miR-4666a-5p91.4444NM_000430
PAFAH1B1hsa-miR-371b-3p91.3039NM_000430
PAFAH1B1hsa-miR-520d-5p91.2852NM_000430
PAFAH1B1hsa-miR-524-5p91.2852NM_000430
PAFAH1B1hsa-miR-519e-3p91.0011NM_000430
PAFAH1B1hsa-miR-33b-3p91.0011NM_000430
PAFAH1B1hsa-miR-515-3p91.0011NM_000430
PAFAH1B1hsa-miR-548c-3p90.6936NM_000430
PAFAH1B1hsa-miR-18b-3p90.5423NM_000430
PAFAH1B1hsa-miR-125b-5p90.5035NM_000430
PAFAH1B1hsa-miR-125a-5p90.5035NM_000430
PAFAH1B1hsa-miR-75990.152NM_000430
PAFAH1B1hsa-miR-216b-3p90.032NM_000430
PAFAH1B1hsa-miR-101-3p89.8737NM_000430
PAFAH1B1hsa-miR-616-5p89.6585NM_000430
PAFAH1B1hsa-miR-1271-5p89.4779NM_000430
PAFAH1B1hsa-miR-1213389.4779NM_000430
PAFAH1B1hsa-miR-430589.4598NM_000430
PAFAH1B1hsa-miR-447389.4257NM_000430
PAFAH1B1hsa-miR-525-5p89.257NM_000430
PAFAH1B1hsa-miR-520a-5p89.257NM_000430
PAFAH1B1hsa-miR-367088.7012NM_000430
PAFAH1B1hsa-miR-6792-5p88.464NM_000430
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Motifs and transcription factors (TFs) regulating PAFAH1B1

check buttonThis table shows the Motifs and transcription factors (TFs) regulating this gene. (Complete files can be downloaded from the download section.)
Gene symbolmotifTF_highConf
PAFAH1B1metacluster_34.4ETS1; ETS1; ETS1; HCFC1; SIX5; SIX5; SIX5; SIX5; SMARCC2; SMARCC2; THAP11; THAP11; ZNF143; ZNF143; ZNF143; ZNF143 (directAnnotation). TBX2; THAP11; THAP11; ZNF143 (inferredBy_Orthology).
PAFAH1B1metacluster_191.2ELK4; NR2C2; NR2C2; NR2C2; NR2C2 (directAnnotation). GABPA (inferredBy_Orthology).
PAFAH1B1taipale_tf_pairs__FOXO1_ELK1_RSCGGATGTTRTN_CAPELK1; FOXO1 (directAnnotation).
PAFAH1B1taipale_tf_pairs__ETV2_FOXO6_RCCGGATGTTKWN_CAPETV2; FOXO6 (directAnnotation).
PAFAH1B1taipale_tf_pairs__ETV2_FOXI1_RSCGGATGTTKW_CAPETV2; FOXI1 (directAnnotation).
PAFAH1B1dbtfbs__GMEB1_K562_ENCSR928KOR_merged_N1GMEB1 (directAnnotation).
PAFAH1B1metacluster_135.11NR2C2 (directAnnotation).
PAFAH1B1metacluster_135.10MBD2; MBD2; MECP2; MECP2 (directAnnotation).
PAFAH1B1metacluster_144.3ZNF704; ZNF704 (directAnnotation).
PAFAH1B1metacluster_7.13ZFX (directAnnotation).
PAFAH1B1kznf__ZNF730_Imbeault2017_RP_RCADEZNF730 (directAnnotation).
PAFAH1B1cisbp__M00968MTF2 (directAnnotation).
PAFAH1B1metacluster_155.23BCL11B; ZNF711; ZNF711 (directAnnotation). ZFY (inferredBy_Orthology).
PAFAH1B1metacluster_160.20JUND; PRDM15 (directAnnotation).
PAFAH1B1cisbp__M00341PAX6 (directAnnotation).
PAFAH1B1metacluster_198.3ZFP64 (directAnnotation).
PAFAH1B1metacluster_141.5NR3C1; THAP1; YY1; YY1; YY1; YY1; YY1; YY1; YY1; YY1; YY1; YY1; YY1; YY1; YY2; YY2; ZNF597 (directAnnotation). YY1; YY1; YY1; YY2; ZFP42 (inferredBy_Orthology).
PAFAH1B1metacluster_151.1KAT7; PML; SMAD5; TAF1; ZFP37; ZGPAT; ZNF519; ZNF519; ZNF571; ZNF770; ZNF770; ZNF770; ZSCAN22; ZSCAN22 (directAnnotation).
PAFAH1B1jaspar__MA0185.1DEAF1 (inferredBy_Orthology).
PAFAH1B1metacluster_61.1DEAF1; DEAF1 (directAnnotation).
PAFAH1B1cisbp__M00788ZFY (inferredBy_Orthology).
PAFAH1B1kznf__ZNF213_Schmitges2016_RCADEZNF213 (directAnnotation).
PAFAH1B1metacluster_175.1ZNF283 (directAnnotation).
PAFAH1B1hdpi__ZNF304ZNF304 (directAnnotation).
PAFAH1B1transfac_pro__M02844BCL6B (inferredBy_Orthology).
PAFAH1B1metacluster_125.2TFAP2A; TFAP2A; TFAP2A; TFAP2A; TFAP2A; TFAP2A; TFAP2A; TFAP2A; TFAP2A; TFAP2A; TFAP2A; TFAP2A; TFAP2A; TFAP2A; TFAP2A; TFAP2A; TFAP2A; TFAP2A; TFAP2A; TFAP2A; TFAP2B; TFAP2B; TFAP2B; TFAP2B; TFAP2B; TFAP2B; TFAP2B; TFAP2B; TFAP2C; TFAP2C; TFAP2C; TFAP2C; TFAP2C; TFAP2C; TFAP2C; TFAP2C; TFAP2C; TFAP2C; TFAP2C; TFAP2C; TFAP2C; TFAP2C; TFAP2D; TFAP2D; TFAP2D; TFAP2E; TFAP2E; TFAP2E; TFAP2E; TFAP2E; TFAP2E; ZNF611; ZNF611 (directAnnotation). TFAP2A; TFAP2A; TFAP2A; TFAP2A; TFAP2A; TFAP2A; TFAP2A; TFAP2A; TFAP2A; TFAP2A; TFAP2A; TFAP2B; TFAP2B; TFAP2B; TFAP2B; TFAP2B; TFAP2B; TFAP2B; TFAP2B; TFAP2B; TFAP2C; TFAP2C; TFAP2C; TFAP2C; TFAP2C; TFAP2C; TFAP2C; TFAP2C; TFAP2C; TFAP2C; TFAP2D; TFAP2D; TFAP2D; TFAP2D; TFAP2D; TFAP2D; TFAP2E; TFAP2E; TFAP2E; TFAP2E; TFAP2E; TFAP2E; TFAP2E (inferredBy_Orthology).
PAFAH1B1metacluster_133.1ZNF304; ZNF304; ZSCAN22 (directAnnotation).
PAFAH1B1transfac_pro__M01199TRIM28 (directAnnotation).
PAFAH1B1kznf__ZNF682_Isakova2017_SMiLE-seqZNF682 (directAnnotation).
PAFAH1B1metacluster_151.2ZNF23 (directAnnotation).
PAFAH1B1transfac_public__M00189TFAP2A; TFAP2B; TFAP2C (directAnnotation).
PAFAH1B1transfac_pro__M01219SP1 (directAnnotation). SP3 (inferredBy_Orthology).
PAFAH1B1transfac_pro__M03806ZBTB7C (directAnnotation).
PAFAH1B1transfac_pro__M00915TFAP2A; TFAP2B; TFAP2C (directAnnotation).
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Acts as a transcription factor

check buttonThis table shows that this differential gene acts as a transcription factor.

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Acts as a drug target

check buttonThis table shows that this differential gene acts as a drug target.



1"Sun X, Zhang Y, Li H, Zhou Y, Shi S, Chen Z, He X, Zhang H, Li F, Yin J, Mou M, Wang Y, Qiu Y, Zhu F. DRESIS: the first comprehensive landscape of drug resistance information. Nucleic Acids Res. 2023 Jan 6;51(D1):D1263-D1275. doi: 10.1093/nar/gkac812. PMID: 36243960; PMCID: PMC9825618."
2"Wishart DS, Feunang YD, Guo AC, Lo EJ, Marcu A, Grant JR, Sajed T, Johnson D, Li C, Sayeeda Z, Assempour N, Iynkkaran I, Liu Y, Maciejewski A, Gale N, Wilson A, Chin L, Cummings R, Le D, Pon A, Knox C, Wilson M. DrugBank 5.0: a major update to the DrugBank database for 2018. Nucleic Acids Res. 2018 Jan 4;46(D1):D1074-D1082. doi: 10.1093/nar/gkx1037. PMID: 29126136; PMCID: PMC5753335."