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Center for Computational Systems Medicine
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Gene summary

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Datasets with differential expression of this gene

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Expression of this gene in the resistant group across all datasets and cell types

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Significant ligand-receptor pairs related to this gene (This gene does not contain this module)

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Known drug resistance mechanisms of this gene (This gene does not contain this module)

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MicroRNAs (miRNAs) regulating this gene

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Motifs and transcription factors (TFs) regulating this gene

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Acts as a transcription factor (This gene does not contain this module)

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Acts as a drug target< (This gene does not contain this module)

Gene: KDSR

Summary for KDSR

Gene informationGene symbol

KDSR

Ensembl ID

ENSG00000119537

Entrez ID

2531

Gene name3-ketodihydrosphingosine reductase
SynonymsDHSR|FVT1|SDR35C1
Gene typeprotein_coding
UniProtAcc

Q06136


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Dataset with differentially expressed gene: KDSR

check buttonDifferentially expression genes between the resistant and sensitive groups. A positive avg_log2FC represents significantly high expression in the resistant group, while a negative avg_log2FC represents significantly low expression in the resistant group.
DatasetSourceTissueCancer type level1Cancer type level2Drug typeRegimenTimepointCell typeavg_log2FCp_val_adj

GSE186960

Panc1 cell lineCell linePancreatic cancerPancreatic ductal adenocarcinoma (PDAC)ChemotherapygemcitabineNAMalignant cells-0.4261397.64e-35

GSE131984_JQ1

SUM159 cell lineCell lineBreast cancerTriple-negative breast cancer (TNBC)Targeted therapyJQ1NAMalignant cells-0.2697132.98e-13

GSE131984_JQ1Pac

SUM159 cell lineCell lineBreast cancerTriple-negative breast cancer (TNBC)Targeted therapyJQ1 + paclitaxelNAMalignant cells-0.273733.84e-07

GSE108397

451Lu cell lineCell lineMelanomaMelanomaTargeted therapyPLX-4720NAMalignant cells-0.4665460.00e+00

GSE175716

PDXTumor tissueLiver cancerAdvanced hepatocellular carcinomaTargeted therapysorafenibNAMalignant cells-0.703090.00e+00

GSE164897_VemCob

A375 cell lineCell lineMelanomaBRAFV600E-mutant melanomaTargeted therapyvemurafenib + combimetinibNAMalignant cells-0.2540410.00e+00

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Expression of KDSR in the resistant group across all datasets and cell types

check buttonRed dots represent significantly high expression in the resistant group, while blue dots represent significantly low expression in the resistant group. White dots represent that there is no significant difference in the expression of this gene between the resistant and sensitive groups. Blank represents that this cell type is not present in this dataset. (If the image exists, the user can click on it to enlarge it in a new window.)
boxplot

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Significant ligand-receptor pairs related to KDSR

check buttonThis table shows the significant ligand-receptor pairs related to this gene across all datasets, timepoints and conditions. (Complete files can be downloaded from the download section.)

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Known drug resistance mechanisms of this gene

check buttonThis table shows the known drug resistance mechanisms of this gene. Clicking on this gene will link to another database that displays more drug resistance-related information.

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MicroRNAs (miRNA) regulating KDSR

check buttonThis table shows the miRNAs with a score of more than 80 regulating this gene. (Complete files can be downloaded from the download section.)
Gene symbolmiRNAScoreGeneBank accession
KDSRhsa-miR-1213699.9496NM_002035
KDSRhsa-miR-4659a-3p99.2319NM_002035
KDSRhsa-miR-4659b-3p99.2319NM_002035
KDSRhsa-miR-548p98.5296NM_002035
KDSRhsa-miR-15a-5p97.1294NM_002035
KDSRhsa-miR-16-5p97.1294NM_002035
KDSRhsa-miR-15b-5p97.1294NM_002035
KDSRhsa-miR-195-5p97.1294NM_002035
KDSRhsa-miR-6838-5p95.9266NM_002035
KDSRhsa-miR-424-5p95.7841NM_002035
KDSRhsa-miR-497-5p95.7841NM_002035
KDSRhsa-miR-6875-3p95.5869NM_002035
KDSRhsa-miR-450b-3p94.8478NM_002035
KDSRhsa-miR-769-3p94.6438NM_002035
KDSRhsa-miR-806394.509NM_002035
KDSRhsa-miR-4524a-3p94.3599NM_002035
KDSRhsa-miR-624-3p92.6137NM_002035
KDSRhsa-miR-3680-3p92.0174NM_002035
KDSRhsa-miR-5011-5p91.916NM_002035
KDSRhsa-miR-4524a-5p90.8903NM_002035
KDSRhsa-miR-4524b-5p90.8903NM_002035
KDSRhsa-miR-153-3p89.8477NM_002035
KDSRhsa-miR-10527-5p89.6798NM_002035
KDSRhsa-miR-3613-3p89.4396NM_002035
KDSRhsa-miR-6508-5p88.4668NM_002035
KDSRhsa-miR-129988.3987NM_002035
KDSRhsa-miR-469888.0558NM_002035
KDSRhsa-miR-4668-5p87.9431NM_002035
KDSRhsa-miR-451187.8985NM_002035
KDSRhsa-miR-455-5p87.3407NM_002035
KDSRhsa-miR-217-3p87.0558NM_002035
KDSRhsa-miR-1277-5p86.9768NM_002035
KDSRhsa-miR-186-5p86.3535NM_002035
KDSRhsa-miR-539-5p86.1461NM_002035
KDSRhsa-miR-806785.6617NM_002035
KDSRhsa-miR-477585.3692NM_002035
KDSRhsa-miR-3679-5p84.9215NM_002035
KDSRhsa-miR-44884.8577NM_002035
KDSRhsa-miR-4713-3p84.1311NM_002035
KDSRhsa-miR-570484.102NM_002035
KDSRhsa-miR-503-5p83.4424NM_002035
KDSRhsa-miR-381-3p83.3282NM_002035
KDSRhsa-miR-30083.3282NM_002035
KDSRhsa-miR-1185-5p82.9679NM_002035
KDSRhsa-miR-453081.3882NM_002035
KDSRhsa-miR-612881.0692NM_002035
KDSRhsa-miR-374a-3p80.8253NM_002035
KDSRhsa-miR-316380.7841NM_002035
KDSRhsa-miR-380-3p80.5595NM_002035
KDSRhsa-miR-5692b80.2424NM_002035
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Motifs and transcription factors (TFs) regulating KDSR

check buttonThis table shows the Motifs and transcription factors (TFs) regulating this gene. (Complete files can be downloaded from the download section.)
Gene symbolmotifTF_highConf
KDSRmetacluster_7.13ZFX (directAnnotation).
KDSRcisbp__M01863ZNF711 (inferredBy_Orthology).
KDSRmetacluster_155.23BCL11B; ZNF711; ZNF711 (directAnnotation). ZFY (inferredBy_Orthology).
KDSRkznf__ZNF783_Imbeault2017_OM_MEMEZNF783 (directAnnotation).
KDSRmetacluster_144.3ZNF704; ZNF704 (directAnnotation).
KDSRmetacluster_182.10ZFX (directAnnotation).
KDSRhomer__TWVGGTCCGC_HINFPHINFP (directAnnotation).
KDSRmetacluster_135.10MBD2; MBD2; MECP2; MECP2 (directAnnotation).
KDSRmetacluster_135.11NR2C2 (directAnnotation).
KDSRtfdimers__MD00038TFAP2C (directAnnotation).
KDSRcisbp__M00968MTF2 (directAnnotation).
KDSRmetacluster_160.20JUND; PRDM15 (directAnnotation).
KDSRcisbp__M00341PAX6 (directAnnotation).
KDSRmetacluster_198.3ZFP64 (directAnnotation).
KDSRmetacluster_151.1KAT7; PML; SMAD5; TAF1; ZFP37; ZGPAT; ZNF519; ZNF519; ZNF571; ZNF770; ZNF770; ZNF770; ZSCAN22; ZSCAN22 (directAnnotation).
KDSRmetacluster_61.1DEAF1; DEAF1 (directAnnotation).
KDSRcisbp__M00788ZFY (inferredBy_Orthology).
KDSRhdpi__ZNF304ZNF304 (directAnnotation).
KDSRmetacluster_125.2TFAP2A; TFAP2A; TFAP2A; TFAP2A; TFAP2A; TFAP2A; TFAP2A; TFAP2A; TFAP2A; TFAP2A; TFAP2A; TFAP2A; TFAP2A; TFAP2A; TFAP2A; TFAP2A; TFAP2A; TFAP2A; TFAP2A; TFAP2A; TFAP2B; TFAP2B; TFAP2B; TFAP2B; TFAP2B; TFAP2B; TFAP2B; TFAP2B; TFAP2C; TFAP2C; TFAP2C; TFAP2C; TFAP2C; TFAP2C; TFAP2C; TFAP2C; TFAP2C; TFAP2C; TFAP2C; TFAP2C; TFAP2C; TFAP2C; TFAP2D; TFAP2D; TFAP2D; TFAP2E; TFAP2E; TFAP2E; TFAP2E; TFAP2E; TFAP2E; ZNF611; ZNF611 (directAnnotation). TFAP2A; TFAP2A; TFAP2A; TFAP2A; TFAP2A; TFAP2A; TFAP2A; TFAP2A; TFAP2A; TFAP2A; TFAP2A; TFAP2B; TFAP2B; TFAP2B; TFAP2B; TFAP2B; TFAP2B; TFAP2B; TFAP2B; TFAP2B; TFAP2C; TFAP2C; TFAP2C; TFAP2C; TFAP2C; TFAP2C; TFAP2C; TFAP2C; TFAP2C; TFAP2C; TFAP2D; TFAP2D; TFAP2D; TFAP2D; TFAP2D; TFAP2D; TFAP2E; TFAP2E; TFAP2E; TFAP2E; TFAP2E; TFAP2E; TFAP2E (inferredBy_Orthology).
KDSRtransfac_pro__M01199TRIM28 (directAnnotation).
KDSRtransfac_public__M00189TFAP2A; TFAP2B; TFAP2C (directAnnotation).
KDSRtransfac_pro__M03806ZBTB7C (directAnnotation).
KDSRtransfac_pro__M00915TFAP2A; TFAP2B; TFAP2C (directAnnotation).
KDSRtaipale_cyt_meth__ZNF385D_NCGTCGCGACGN_eDBD_methZNF385D (directAnnotation).
KDSRmetacluster_7.5PLAGL1; PLAGL1 (directAnnotation).
KDSRtransfac_pro__M06173ZNF85 (directAnnotation).
KDSRhdpi__ELF2ELF2 (directAnnotation).
KDSRswissregulon__hs__ELK1ELK1 (directAnnotation).
KDSRmetacluster_81.7CREB1 (directAnnotation).
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Acts as a transcription factor

check buttonThis table shows that this differential gene acts as a transcription factor.

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Acts as a drug target

check buttonThis table shows that this differential gene acts as a drug target.



1"Sun X, Zhang Y, Li H, Zhou Y, Shi S, Chen Z, He X, Zhang H, Li F, Yin J, Mou M, Wang Y, Qiu Y, Zhu F. DRESIS: the first comprehensive landscape of drug resistance information. Nucleic Acids Res. 2023 Jan 6;51(D1):D1263-D1275. doi: 10.1093/nar/gkac812. PMID: 36243960; PMCID: PMC9825618."
2"Wishart DS, Feunang YD, Guo AC, Lo EJ, Marcu A, Grant JR, Sajed T, Johnson D, Li C, Sayeeda Z, Assempour N, Iynkkaran I, Liu Y, Maciejewski A, Gale N, Wilson A, Chin L, Cummings R, Le D, Pon A, Knox C, Wilson M. DrugBank 5.0: a major update to the DrugBank database for 2018. Nucleic Acids Res. 2018 Jan 4;46(D1):D1074-D1082. doi: 10.1093/nar/gkx1037. PMID: 29126136; PMCID: PMC5753335."