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Center for Computational Systems Medicine
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Gene summary

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Datasets with differential expression of this gene

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Expression of this gene in the resistant group across all datasets and cell types

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Significant ligand-receptor pairs related to this gene (This gene does not contain this module)

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Known drug resistance mechanisms of this gene (This gene does not contain this module)

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MicroRNAs (miRNAs) regulating this gene

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Motifs and transcription factors (TFs) regulating this gene

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Acts as a transcription factor (This gene does not contain this module)

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Acts as a drug target

Gene: HGF

Summary for HGF

Gene informationGene symbol

HGF

Ensembl ID

ENSG00000019991

Entrez ID

3082

Gene namehepatocyte growth factor
SynonymsDFNB39|F-TCF|HGFB|HPTA|SF
Gene typeprotein_coding
UniProtAcc

P14210


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Dataset with differentially expressed gene: HGF

check buttonDifferentially expression genes between the resistant and sensitive groups. A positive avg_log2FC represents significantly high expression in the resistant group, while a negative avg_log2FC represents significantly low expression in the resistant group.
DatasetSourceTissueCancer type level1Cancer type level2Drug typeRegimenTimepointCell typeavg_log2FCp_val_adj

GSE189460

patientsBone marrow aspirateMultiple myelomaMultiple myeloma (MM)Targeted therapybortezomib + melphalan + prednisolonepreMalignant cells-0.542560.00e+00

GSE161801_PI

patientsBone marrow aspirateMultiple myelomaRefractory multiple myeloma (MM)Targeted therapycarfilzomib + dexamethasonepostMalignant cells-0.3758113.30e-15

GSE161801_PI

patientsBone marrow aspirateMultiple myelomaRefractory multiple myeloma (MM)Targeted therapycarfilzomib + dexamethasonepreMalignant cells-0.7533380.00e+00

GSE199333

patientsBone marrow aspirateAcute myeloid leukemiaPrimary FLT3-ITD-mutated acute myeloid leukemia (AML)Targeted therapygilteritinibpostMalignant cells0.9306350.00e+00

GSE175716

PDXTumor tissueLiver cancerAdvanced hepatocellular carcinomaTargeted therapysorafenibNAMalignant cells-0.7907070.00e+00

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Expression of HGF in the resistant group across all datasets and cell types

check buttonRed dots represent significantly high expression in the resistant group, while blue dots represent significantly low expression in the resistant group. White dots represent that there is no significant difference in the expression of this gene between the resistant and sensitive groups. Blank represents that this cell type is not present in this dataset. (If the image exists, the user can click on it to enlarge it in a new window.)
boxplot

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Significant ligand-receptor pairs related to HGF

check buttonThis table shows the significant ligand-receptor pairs related to this gene across all datasets, timepoints and conditions. (Complete files can be downloaded from the download section.)

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Known drug resistance mechanisms of this gene

check buttonThis table shows the known drug resistance mechanisms of this gene. Clicking on this gene will link to another database that displays more drug resistance-related information.

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MicroRNAs (miRNA) regulating HGF

check buttonThis table shows the miRNAs with a score of more than 80 regulating this gene. (Complete files can be downloaded from the download section.)
Gene symbolmiRNAScoreGeneBank accession
HGFhsa-miR-4714-3p96.53NM_001010934
HGFhsa-miR-4768-3p95.2294NM_000601
HGFhsa-miR-4716-3p94.458NM_001010934
HGFhsa-miR-6794-5p94.458NM_001010934
HGFhsa-miR-95-5p93.0692NM_000601
HGFhsa-miR-316392.6199NM_000601
HGFhsa-miR-7159-5p92.2031NM_000601
HGFhsa-miR-366291.8959NM_001010932
HGFhsa-miR-26b-5p91.842NM_000601
HGFhsa-miR-129791.842NM_000601
HGFhsa-miR-26a-5p91.842NM_000601
HGFhsa-miR-6760-3p91.5832NM_000601
HGFhsa-miR-655-5p91.4932NM_000601
HGFhsa-miR-392491.4017NM_001010932
HGFhsa-miR-324-3p91.3066NM_001010934
HGFhsa-miR-3613-3p91.1801NM_001010932
HGFhsa-miR-520e-5p90.442NM_000601
HGFhsa-miR-1288-3p90.353NM_001010933
HGFhsa-miR-513a-5p90.0316NM_001010932
HGFhsa-miR-432890.0011NM_001010934
HGFhsa-miR-428289.91NM_001010932
HGFhsa-miR-676-5p89.6744NM_001010932
HGFhsa-miR-135a-3p89.2485NM_001010934
HGFhsa-miR-54388.6967NM_000601
HGFhsa-miR-446588.1755NM_000601
HGFhsa-miR-766-5p87.5528NM_001010934
HGFhsa-miR-570-3p86.8359NM_001010934
HGFhsa-miR-204-5p86.2325NM_001010932
HGFhsa-miR-211-5p86.2325NM_001010932
HGFhsa-miR-5189-3p86.0706NM_001010932
HGFhsa-miR-374a-5p86.0647NM_001010932
HGFhsa-miR-376b-3p85.8291NM_001010934
HGFhsa-miR-376a-3p85.8291NM_001010934
HGFhsa-miR-471085.5004NM_001010932
HGFhsa-miR-56885.1258NM_001010934
HGFhsa-miR-6832-3p84.6007NM_001010932
HGFhsa-miR-364684.0413NM_001010932
HGFhsa-miR-3925-3p84.0101NM_000601
HGFhsa-miR-487b-5p83.4323NM_001010932
HGFhsa-miR-487a-5p83.4323NM_001010932
HGFhsa-miR-6882-5p83.3324NM_001010932
HGFhsa-miR-4802-5p83.1028NM_001010934
HGFhsa-miR-184383.1028NM_001010934
HGFhsa-miR-425-5p82.9637NM_001010932
HGFhsa-miR-568882.8442NM_001010934
HGFhsa-miR-141-3p82.5981NM_001010932
HGFhsa-miR-200a-3p82.5981NM_001010932
HGFhsa-miR-544a82.0871NM_000601
HGFhsa-miR-374b-5p81.789NM_001010932
HGFhsa-miR-10523-5p81.7341NM_001010934
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Motifs and transcription factors (TFs) regulating HGF

check buttonThis table shows the Motifs and transcription factors (TFs) regulating this gene. (Complete files can be downloaded from the download section.)
Gene symbolmotifTF_highConf
HGFtaipale_tf_pairs__ETV2_HOXA2_NCCGGAAGTMATTA_CAP_reprETV2; HOXA2 (directAnnotation).
HGFhocomoco__TYY2_HUMAN.H11MO.0.DYY2 (directAnnotation).
HGFtaipale_tf_pairs__HOXB2_ETV4_ACCGGAAATGAN_CAPETV4; HOXB2 (directAnnotation).
HGFmetacluster_141.4GLIS2 (directAnnotation).
HGFtaipale_cyt_meth__ELF3_NTGTGCGGATGCN_FL_reprELF3 (directAnnotation).
HGFjaspar__MA1483.2ELF2 (directAnnotation).
HGFtaipale_tf_pairs__MEIS1_ELF1_NTGCCGGAAGTN_CAP_reprELF1; MEIS1 (directAnnotation).
HGFjaspar__MA1708.1ETV7 (directAnnotation).
HGFswissregulon__hs__ETV6ETV6 (directAnnotation).
HGFtaipale_tf_pairs__HOXB2_ETV1_ACCGGAAATGA_CAPETV1; HOXB2 (directAnnotation).
HGFtaipale_tf_pairs__ETV2_SPDEF_NSCGGACGGAWATCCGSNT_CAPETV2; SPDEF (directAnnotation).
HGFtaipale_tf_pairs__HOXB2_ELK3_RSCGGAAGTMRTTA_CAPELK3; HOXB2 (directAnnotation).
HGFtaipale__YY2_DBD_NNCCGCCATNW_reprYY2 (directAnnotation).
HGFtaipale_tf_pairs__GCM1_CEBPB_MTRSGGGNNNNNNTTRCGYAAN_CAPCEBPB; GCM1 (directAnnotation).
HGFhocomoco__HSFY1_HUMAN.H11MO.0.DHSFY1; HSFY2 (directAnnotation).
HGFtaipale_cyt_meth__ZBTB2_NTTTCCGGTAMN_eDBD_meth_reprZBTB2 (directAnnotation).
HGFtaipale_tf_pairs__TEAD4_ETV4_RCCGGAAATRCC_CAPETV4; TEAD4 (directAnnotation).
HGFjaspar__MA1957.1ELK1 (directAnnotation).
HGFtransfac_pro__M06085ZNF26 (directAnnotation).
HGFtfdimers__MD00302IRF7; IRF8 (directAnnotation).
HGFtfdimers__MD00138IRF1; IRF2; IRF3; IRF4; IRF5; IRF7; IRF8; IRF9; MYB (directAnnotation).
HGFkznf__ZNF682_Isakova2017_SMiLE-seqZNF682 (directAnnotation).
HGFmetacluster_166.4BCLAF1; EHF; ELF1; ELF1; ELF1; ELF1; ELF1; ELF1; ELF2; ELF2; ELF4; ELK1; ELK1; ELK1; ELK1; ELK1; ELK1; ELK1; ELK1; ELK1; ELK3; ELK3; ELK3; ELK3; ELK4; ERG; ERG; ERG; ERG; ETS1; ETS1; ETS1; ETS1; ETS1; ETV1; ETV1; ETV1; ETV1; ETV2; ETV3; ETV4; ETV4; ETV4; ETV4; ETV4; ETV5; ETV7; FEV; FEV; FLI1; FLI1; FLI1; FLI1; GABPA; GABPA; GABPA; GABPA; GABPA; GABPA; GABPB1; GATAD1; PHF20; ZBTB25; ZBTB40 (directAnnotation). EHF; ELF1; ELF1; ELF3; ELF5; ELK3; ELK4; ERG; ETS1; ETV1; ETV2; ETV4; FLI1; GABPA; GABPA (inferredBy_Orthology).
HGFtaipale_tf_pairs__ELK1_EOMES_TNRCACCGGAAGN_CAPELK1; EOMES (directAnnotation).
HGFtaipale__ELK1_full_NACTTCCGSCGGAARMN_reprELK1 (directAnnotation).
HGFtaipale_tf_pairs__ELK1_TBX21_TNRCACCGGAAGNN_CAP_reprELK1; TBX21 (directAnnotation).
HGFmetacluster_34.3EGR1; ETS1; SETDB1; SIX5; SIX5; ZNF143; ZNF76 (directAnnotation).
HGFcisbp__M08198ELF1 (directAnnotation).
HGFtaipale_tf_pairs__TEAD4_ERG_RSCGGAAATRCC_CAP_reprERG; TEAD4 (directAnnotation).
HGFtransfac_pro__M06237ZNF846 (directAnnotation).
HGFkznf__ZNF33A_Schmitges2016_RCADEZNF33A (directAnnotation).
HGFtransfac_pro__M06766ZNF835 (directAnnotation).
HGFtfdimers__MD00269CRX; PBX1 (directAnnotation).
HGFmetacluster_29.4BCL6; BCL6; BCL6; BCL6; BCL6B; BCL6B; BCL6B; BCL6B; BCL6B (directAnnotation). BCL6; BCL6; BCL6 (inferredBy_Orthology).
HGFtransfac_pro__M01425HNF1B (directAnnotation).
HGFtransfac_pro__M06280ZFP69 (directAnnotation).
HGFtransfac_pro__M06226ZNF460 (directAnnotation).
HGFtaipale_cyt_meth__ZNF460_NAACGCCCCCCGN_eDBD_reprZNF460 (directAnnotation).
HGFtransfac_pro__M01969FOXO1 (directAnnotation).
HGFswissregulon__hs__CLOCKCLOCK (directAnnotation).
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Acts as a transcription factor

check buttonThis table shows that this differential gene acts as a transcription factor.

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Acts as a drug target

check buttonThis table shows that this differential gene acts as a drug target.
Target nameDrug nameDrug IDDrug type
HGF"ABT-510"

DB05434

small molecule
HGF"Foretinib"

DB12307

small molecule
HGF"Heparin"

DB01109

small molecule
HGF"N,O6-Disulfo-Glucosamine"

DB03959

small molecule
HGF"O2-Sulfo-Glucuronic Acid"

DB02264

small molecule
HGF"Valproic acid"

DB00313

small molecule
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1"Sun X, Zhang Y, Li H, Zhou Y, Shi S, Chen Z, He X, Zhang H, Li F, Yin J, Mou M, Wang Y, Qiu Y, Zhu F. DRESIS: the first comprehensive landscape of drug resistance information. Nucleic Acids Res. 2023 Jan 6;51(D1):D1263-D1275. doi: 10.1093/nar/gkac812. PMID: 36243960; PMCID: PMC9825618."
2"Wishart DS, Feunang YD, Guo AC, Lo EJ, Marcu A, Grant JR, Sajed T, Johnson D, Li C, Sayeeda Z, Assempour N, Iynkkaran I, Liu Y, Maciejewski A, Gale N, Wilson A, Chin L, Cummings R, Le D, Pon A, Knox C, Wilson M. DrugBank 5.0: a major update to the DrugBank database for 2018. Nucleic Acids Res. 2018 Jan 4;46(D1):D1074-D1082. doi: 10.1093/nar/gkx1037. PMID: 29126136; PMCID: PMC5753335."