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Center for Computational Systems Medicine
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Gene summary

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Datasets with differential expression of this gene

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Expression of this gene in the resistant group across all datasets and cell types

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Significant ligand-receptor pairs related to this gene (This gene does not contain this module)

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Known drug resistance mechanisms of this gene (This gene does not contain this module)

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MicroRNAs (miRNAs) regulating this gene

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Motifs and transcription factors (TFs) regulating this gene

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Acts as a transcription factor (This gene does not contain this module)

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Acts as a drug target< (This gene does not contain this module)

Gene: GPATCH8

Summary for GPATCH8

Gene informationGene symbol

GPATCH8

Ensembl ID

ENSG00000186566

Entrez ID

23131

Gene nameG-patch domain containing 8
SynonymsGPATC8|KIAA0553
Gene typeprotein_coding
UniProtAcc

Q9UKJ3


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Dataset with differentially expressed gene: GPATCH8

check buttonDifferentially expression genes between the resistant and sensitive groups. A positive avg_log2FC represents significantly high expression in the resistant group, while a negative avg_log2FC represents significantly low expression in the resistant group.
DatasetSourceTissueCancer type level1Cancer type level2Drug typeRegimenTimepointCell typeavg_log2FCp_val_adj

GSE138267

CDXTumor tissueLung cancerSmall cell lung cancer (SCLC)ChemotherapyNANAMalignant cells0.2931420.00e+00

GSE199333

patientsBone marrow aspirateAcute myeloid leukemiaPrimary FLT3-ITD-mutated acute myeloid leukemia (AML)Targeted therapygilteritinibpostNK cells-0.2505381.65e-28

GSE199333

patientsBone marrow aspirateAcute myeloid leukemiaPrimary FLT3-ITD-mutated acute myeloid leukemia (AML)Targeted therapygilteritinibpostCD4+ T cells-0.2530490.00e+00

GSE199333

patientsBone marrow aspirateAcute myeloid leukemiaPrimary FLT3-ITD-mutated acute myeloid leukemia (AML)Targeted therapygilteritinibpostCD8+ T cells-0.2980593.71e-32

GSE108397

451Lu cell lineCell lineMelanomaMelanomaTargeted therapyPLX-4720NAMalignant cells-0.3927360.00e+00

GSE175716

PDXTumor tissueLiver cancerAdvanced hepatocellular carcinomaTargeted therapysorafenibNAMalignant cells-0.3325063.75e-32

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Expression of GPATCH8 in the resistant group across all datasets and cell types

check buttonRed dots represent significantly high expression in the resistant group, while blue dots represent significantly low expression in the resistant group. White dots represent that there is no significant difference in the expression of this gene between the resistant and sensitive groups. Blank represents that this cell type is not present in this dataset. (If the image exists, the user can click on it to enlarge it in a new window.)
boxplot

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Significant ligand-receptor pairs related to GPATCH8

check buttonThis table shows the significant ligand-receptor pairs related to this gene across all datasets, timepoints and conditions. (Complete files can be downloaded from the download section.)

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Known drug resistance mechanisms of this gene

check buttonThis table shows the known drug resistance mechanisms of this gene. Clicking on this gene will link to another database that displays more drug resistance-related information.

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MicroRNAs (miRNA) regulating GPATCH8

check buttonThis table shows the miRNAs with a score of more than 80 regulating this gene. (Complete files can be downloaded from the download section.)
Gene symbolmiRNAScoreGeneBank accession
GPATCH8hsa-miR-619-5p98.0936NM_001304941
GPATCH8hsa-miR-6506-5p98.0936NM_001304941
GPATCH8hsa-miR-2467-3p97.538NM_001304941
GPATCH8hsa-miR-605-3p97.0596NM_001002909
GPATCH8hsa-miR-6876-5p96.3263NM_001002909
GPATCH8hsa-miR-424-5p95.7706NM_001002909
GPATCH8hsa-miR-431495.1866NM_001304941
GPATCH8hsa-miR-6733-3p95.1616NM_001304941
GPATCH8hsa-miR-447694.8538NM_001002909
GPATCH8hsa-miR-16-5p94.6976NM_001002909
GPATCH8hsa-miR-15b-5p94.6976NM_001002909
GPATCH8hsa-miR-195-5p94.6976NM_001002909
GPATCH8hsa-miR-15a-5p94.6976NM_001002909
GPATCH8hsa-miR-497-5p94.6976NM_001002909
GPATCH8hsa-miR-6838-5p94.6976NM_001002909
GPATCH8hsa-miR-34b-3p94.5258NM_001002909
GPATCH8hsa-miR-670-5p94.4668NM_001002909
GPATCH8hsa-miR-613093.9461NM_001002909
GPATCH8hsa-miR-124-3p93.8183NM_001002909
GPATCH8hsa-miR-506-3p93.8183NM_001002909
GPATCH8hsa-miR-613392.4004NM_001002909
GPATCH8hsa-miR-451092.4004NM_001002909
GPATCH8hsa-miR-612792.4004NM_001002909
GPATCH8hsa-miR-612992.4004NM_001002909
GPATCH8hsa-miR-10527-5p92.2825NM_001002909
GPATCH8hsa-miR-3613-3p92.0967NM_001002909
GPATCH8hsa-miR-128392.0135NM_001002909
GPATCH8hsa-miR-3120-3p91.9011NM_001002909
GPATCH8hsa-miR-34c-3p91.4074NM_001002909
GPATCH8hsa-miR-448791.3804NM_001304941
GPATCH8hsa-miR-556-5p91.2998NM_001304941
GPATCH8hsa-miR-4668-3p91.2799NM_001002909
GPATCH8hsa-miR-5582-5p90.9146NM_001002909
GPATCH8hsa-miR-545-3p90.3099NM_001002909
GPATCH8hsa-miR-153-5p89.567NM_001304941
GPATCH8hsa-miR-148a-3p89.2375NM_001002909
GPATCH8hsa-miR-148b-3p89.2375NM_001002909
GPATCH8hsa-miR-152-3p89.2375NM_001002909
GPATCH8hsa-miR-431988.4585NM_001002909
GPATCH8hsa-miR-337-3p88.3408NM_001304941
GPATCH8hsa-miR-3689a-5p87.68NM_001304941
GPATCH8hsa-miR-3689f87.68NM_001304941
GPATCH8hsa-miR-3689b-5p87.68NM_001304941
GPATCH8hsa-miR-3689e87.68NM_001304941
GPATCH8hsa-miR-133a-5p87.4994NM_001304941
GPATCH8hsa-miR-129987.3742NM_001304941
GPATCH8hsa-miR-299-5p86.9948NM_001002909
GPATCH8hsa-miR-1287-3p85.5579NM_001304941
GPATCH8hsa-miR-125a-5p85.3045NM_001002909
GPATCH8hsa-miR-125b-5p85.3045NM_001002909
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Motifs and transcription factors (TFs) regulating GPATCH8

check buttonThis table shows the Motifs and transcription factors (TFs) regulating this gene. (Complete files can be downloaded from the download section.)
Gene symbolmotifTF_highConf
GPATCH8cisbp__M01863ZNF711 (inferredBy_Orthology).
GPATCH8taipale_tf_pairs__ETS2_RCCGGAAGTG_HTETS2 (directAnnotation).
GPATCH8jaspar__MA1483.2ELF2 (directAnnotation).
GPATCH8metacluster_155.23BCL11B; ZNF711; ZNF711 (directAnnotation). ZFY (inferredBy_Orthology).
GPATCH8kznf__ZNF783_Imbeault2017_OM_MEMEZNF783 (directAnnotation).
GPATCH8metacluster_182.10ZFX (directAnnotation).
GPATCH8hdpi__ETV4ETV4 (directAnnotation).
GPATCH8metacluster_135.10MBD2; MBD2; MECP2; MECP2 (directAnnotation).
GPATCH8taipale_tf_pairs__GCM1_SPDEF_RTGNKGGCGGAWG_CAP_reprGCM1; SPDEF (directAnnotation).
GPATCH8taipale_cyt_meth__ZNF281_NCCCCTCCCCCN_eDBD_methZNF281 (directAnnotation).
GPATCH8metacluster_15.2E2F1; E2F1; E2F1; E2F1; E2F1; E2F3; E2F4; E2F4; E2F4; E2F6; E2F6; E2F6; E2F6; E2F6; E2F6; E2F6; E2F7; TFDP1; TFDP2; ZNF566; ZNF566; ZNF574 (directAnnotation). E2F3; E2F3; E2F4 (inferredBy_Orthology).
GPATCH8metacluster_141.5NR3C1; THAP1; YY1; YY1; YY1; YY1; YY1; YY1; YY1; YY1; YY1; YY1; YY1; YY1; YY2; YY2; ZNF597 (directAnnotation). YY1; YY1; YY1; YY2; ZFP42 (inferredBy_Orthology).
GPATCH8transfac_pro__M02090E2F4 (directAnnotation).
GPATCH8metacluster_15.3E2F1; E2F6; E2F8; E2F8; TFDP1 (directAnnotation). E2F3 (inferredBy_Orthology).
GPATCH8hocomoco__PROX1_HUMAN.H11MO.0.DPROX1 (directAnnotation).
GPATCH8metacluster_126.3LIN28B; LIN28B (directAnnotation).
GPATCH8homer__GGCGGGAARN_E2F6E2F6 (directAnnotation).
GPATCH8taipale_tf_pairs__GCM1_ELF1_GTGCGGGCGGAAGTN_CAP_reprELF1; GCM1 (directAnnotation).
GPATCH8metacluster_135.11NR2C2 (directAnnotation).
GPATCH8metacluster_160.20JUND; PRDM15 (directAnnotation).
GPATCH8jaspar__MA0185.1DEAF1 (inferredBy_Orthology).
GPATCH8metacluster_61.1DEAF1; DEAF1 (directAnnotation).
GPATCH8cisbp__M00788ZFY (inferredBy_Orthology).
GPATCH8kznf__ZNF213_Schmitges2016_RCADEZNF213 (directAnnotation).
GPATCH8metacluster_175.1ZNF283 (directAnnotation).
GPATCH8hdpi__ZNF304ZNF304 (directAnnotation).
GPATCH8transfac_pro__M02844BCL6B (inferredBy_Orthology).
GPATCH8kznf__ZNF682_Isakova2017_SMiLE-seqZNF682 (directAnnotation).
GPATCH8transfac_pro__M02913SP140 (inferredBy_Orthology).
GPATCH8transfac_pro__M01090SMAD9 (inferredBy_Orthology).
GPATCH8transfac_pro__M01088DEAF1 (inferredBy_Orthology).
GPATCH8transfac_pro__M00430E2F1 (directAnnotation).
GPATCH8transfac_pro__M04893TAF1 (directAnnotation).
GPATCH8homer__NANTGCSGCA_Zfp57ZFP57 (directAnnotation).
GPATCH8hdpi__TP73TP73 (directAnnotation).
GPATCH8transfac_pro__M02865GMEB1 (inferredBy_Orthology).
GPATCH8transfac_pro__M08894OVOL1; OVOL2 (directAnnotation).
GPATCH8hdpi__HIP2UBE2K (directAnnotation).
GPATCH8hdpi__TIMELESSTIMELESS (directAnnotation).
GPATCH8metacluster_55.3E2F6; EGR1; NRF1; NRF1; NRF1; NRF1; NRF1; NRF1; NRF1; NRF1; NRF1; NRF1; ZBTB2; ZSCAN10 (directAnnotation). NFE2L1; NRF1; NRF1; NRF1 (inferredBy_Orthology).
GPATCH8metacluster_191.5SPDEF (inferredBy_Orthology).
GPATCH8taipale_tf_pairs__E2F1_ELK1_SGCGCNNNNNNNNNNCGGAAGN_CAP_reprE2F1; ELK1 (directAnnotation).
GPATCH8transfac_pro__M01238DEAF1 (inferredBy_Orthology).
GPATCH8taipale_cyt_meth__ZBTB37_NYACCGCRNNYACCGYR_eDBD_meth_reprZBTB37 (directAnnotation).
GPATCH8hdpi__RARARARA (directAnnotation).
GPATCH8taipale_cyt_meth__ZNF385D_NCGTCGCGACGN_eDBD_methZNF385D (directAnnotation).
GPATCH8hdpi__ELF2ELF2 (directAnnotation).
GPATCH8taipale_tf_pairs__TFAP2C_DLX3_NSCCNNNRGGCANNNNNNTAATKR_CAP_reprDLX3; TFAP2C (directAnnotation).
GPATCH8taipale_tf_pairs__ERF_PITX1_NSCGGANNNNNNGGMTTA_CAPERF; PITX1 (directAnnotation).
GPATCH8metacluster_138.2ELF1; ELF2; ELF4; ELK1; ELK1; ELK1; ELK1; ELK3; ELK4; ELK4; ELK4; ELK4; ELK4; ELK4; ELK4; ERF; ERG; ERG; ERG; ERG; ETS1; ETS1; ETS2; ETS2; ETV1; ETV1; ETV1; ETV2; ETV3; ETV4; ETV5; ETV5; FEV; FLI1; FLI1; GABPA; GABPA; KMT2B; SPDEF; SPDEF; SPDEF; ZBTB11; ZNF518A; ZNF580 (directAnnotation). ELF1; ELF2; ELF4; ELK1; ELK1; ELK3; ELK4; ERG; ETS1; ETS2; ETV1; ETV2; ETV3; ETV4; ETV5; FEV; FLI1; FLI1; GABPA; SPDEF; SPDEF (inferredBy_Orthology).
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Acts as a transcription factor

check buttonThis table shows that this differential gene acts as a transcription factor.

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Acts as a drug target

check buttonThis table shows that this differential gene acts as a drug target.



1"Sun X, Zhang Y, Li H, Zhou Y, Shi S, Chen Z, He X, Zhang H, Li F, Yin J, Mou M, Wang Y, Qiu Y, Zhu F. DRESIS: the first comprehensive landscape of drug resistance information. Nucleic Acids Res. 2023 Jan 6;51(D1):D1263-D1275. doi: 10.1093/nar/gkac812. PMID: 36243960; PMCID: PMC9825618."
2"Wishart DS, Feunang YD, Guo AC, Lo EJ, Marcu A, Grant JR, Sajed T, Johnson D, Li C, Sayeeda Z, Assempour N, Iynkkaran I, Liu Y, Maciejewski A, Gale N, Wilson A, Chin L, Cummings R, Le D, Pon A, Knox C, Wilson M. DrugBank 5.0: a major update to the DrugBank database for 2018. Nucleic Acids Res. 2018 Jan 4;46(D1):D1074-D1082. doi: 10.1093/nar/gkx1037. PMID: 29126136; PMCID: PMC5753335."