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Center for Computational Systems Medicine
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Gene summary

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Datasets with differential expression of this gene

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Expression of this gene in the resistant group across all datasets and cell types

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Significant ligand-receptor pairs related to this gene (This gene does not contain this module)

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Known drug resistance mechanisms of this gene (This gene does not contain this module)

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MicroRNAs (miRNAs) regulating this gene

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Motifs and transcription factors (TFs) regulating this gene

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Acts as a transcription factor (This gene does not contain this module)

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Acts as a drug target< (This gene does not contain this module)

Gene: GPATCH2L

Summary for GPATCH2L

Gene informationGene symbol

GPATCH2L

Ensembl ID

ENSG00000089916

Entrez ID

55668

Gene nameG-patch domain containing 2 like
SynonymsC14orf118|FLJ10033|FLJ20689
Gene typeprotein_coding
UniProtAcc

NA


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Dataset with differentially expressed gene: GPATCH2L

check buttonDifferentially expression genes between the resistant and sensitive groups. A positive avg_log2FC represents significantly high expression in the resistant group, while a negative avg_log2FC represents significantly low expression in the resistant group.
DatasetSourceTissueCancer type level1Cancer type level2Drug typeRegimenTimepointCell typeavg_log2FCp_val_adj

GSE175716

PDXTumor tissueLiver cancerAdvanced hepatocellular carcinomaTargeted therapysorafenibNAMalignant cells-0.3247394.60e-33

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Expression of GPATCH2L in the resistant group across all datasets and cell types

check buttonRed dots represent significantly high expression in the resistant group, while blue dots represent significantly low expression in the resistant group. White dots represent that there is no significant difference in the expression of this gene between the resistant and sensitive groups. Blank represents that this cell type is not present in this dataset. (If the image exists, the user can click on it to enlarge it in a new window.)
boxplot

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Significant ligand-receptor pairs related to GPATCH2L

check buttonThis table shows the significant ligand-receptor pairs related to this gene across all datasets, timepoints and conditions. (Complete files can be downloaded from the download section.)

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Known drug resistance mechanisms of this gene

check buttonThis table shows the known drug resistance mechanisms of this gene. Clicking on this gene will link to another database that displays more drug resistance-related information.

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MicroRNAs (miRNA) regulating GPATCH2L

check buttonThis table shows the miRNAs with a score of more than 80 regulating this gene. (Complete files can be downloaded from the download section.)
Gene symbolmiRNAScoreGeneBank accession
GPATCH2Lhsa-miR-6867-5p99.8829NM_017926
GPATCH2Lhsa-miR-4659a-3p99.6744NM_017926
GPATCH2Lhsa-miR-4659b-3p99.6744NM_017926
GPATCH2Lhsa-miR-548e-5p99.1637NM_001322027
GPATCH2Lhsa-miR-6875-3p97.945NM_017926
GPATCH2Lhsa-miR-1255b-2-3p97.8018NM_017926
GPATCH2Lhsa-miR-568097.7004NM_001322027
GPATCH2Lhsa-miR-153-5p97.0494NM_017926
GPATCH2Lhsa-miR-324-3p96.5568NM_017926
GPATCH2Lhsa-miR-6797-5p96.2492NM_017926
GPATCH2Lhsa-miR-1249-5p96.2492NM_017926
GPATCH2Lhsa-miR-186-5p96.2297NM_001322031
GPATCH2Lhsa-miR-372-5p95.9254NM_001322030
GPATCH2Lhsa-miR-335-3p95.5776NM_017926
GPATCH2Lhsa-miR-3529-3p95.551NM_017926
GPATCH2Lhsa-miR-3160-5p94.9619NM_001322032
GPATCH2Lhsa-miR-4795-3p94.6857NM_017926
GPATCH2Lhsa-miR-1250-3p94.4991NM_017926
GPATCH2Lhsa-miR-5187-3p94.2672NM_017926
GPATCH2Lhsa-miR-21-5p94.2196NM_001322028
GPATCH2Lhsa-miR-590-5p93.9508NM_001322028
GPATCH2Lhsa-miR-7110-3p93.7794NM_001322030
GPATCH2Lhsa-miR-6833-3p93.7759NM_017926
GPATCH2Lhsa-miR-202-5p93.4444NM_001322026
GPATCH2Lhsa-miR-548al93.2831NM_001322028
GPATCH2Lhsa-miR-4445-3p93.2831NM_001322028
GPATCH2Lhsa-miR-520e-5p93.2349NM_001322027
GPATCH2Lhsa-miR-318292.7619NM_017926
GPATCH2Lhsa-miR-3617-5p92.6729NM_017926
GPATCH2Lhsa-miR-64192.6729NM_017926
GPATCH2Lhsa-miR-468692.5863NM_001322030
GPATCH2Lhsa-miR-194-5p92.4814NM_001322029
GPATCH2Lhsa-miR-365892.2543NM_001322030
GPATCH2Lhsa-miR-442792.2447NM_017926
GPATCH2Lhsa-miR-548o-3p92.1823NM_001322026
GPATCH2Lhsa-miR-2115-3p92.0305NM_017926
GPATCH2Lhsa-miR-132391.9841NM_001322026
GPATCH2Lhsa-miR-196a-1-3p91.9499NM_017926
GPATCH2Lhsa-miR-472991.4786NM_001322031
GPATCH2Lhsa-miR-545-5p91.4548NM_017926
GPATCH2Lhsa-miR-548aw91.3533NM_017926
GPATCH2Lhsa-miR-181a-2-3p91.336NM_017926
GPATCH2Lhsa-miR-612691.0132NM_001322027
GPATCH2Lhsa-miR-428290.9734NM_001322031
GPATCH2Lhsa-miR-467390.892NM_001322027
GPATCH2Lhsa-miR-338-5p90.6399NM_001322030
GPATCH2Lhsa-miR-371b-5p90.5909NM_001322030
GPATCH2Lhsa-miR-616-5p90.5909NM_001322030
GPATCH2Lhsa-miR-373-5p90.5909NM_001322030
GPATCH2Lhsa-miR-4680-3p90.4425NM_017926
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Motifs and transcription factors (TFs) regulating GPATCH2L

check buttonThis table shows the Motifs and transcription factors (TFs) regulating this gene. (Complete files can be downloaded from the download section.)
Gene symbolmotifTF_highConf
GPATCH2Lmetacluster_7.13ZFX (directAnnotation).
GPATCH2Lkznf__ZNF730_Imbeault2017_RP_RCADEZNF730 (directAnnotation).
GPATCH2Lmetacluster_155.23BCL11B; ZNF711; ZNF711 (directAnnotation). ZFY (inferredBy_Orthology).
GPATCH2Lmetacluster_151.1KAT7; PML; SMAD5; TAF1; ZFP37; ZGPAT; ZNF519; ZNF519; ZNF571; ZNF770; ZNF770; ZNF770; ZSCAN22; ZSCAN22 (directAnnotation).
GPATCH2Lcisbp__M00788ZFY (inferredBy_Orthology).
GPATCH2Lmetacluster_175.1ZNF283 (directAnnotation).
GPATCH2Ltransfac_pro__M02844BCL6B (inferredBy_Orthology).
GPATCH2Lmetacluster_125.2TFAP2A; TFAP2A; TFAP2A; TFAP2A; TFAP2A; TFAP2A; TFAP2A; TFAP2A; TFAP2A; TFAP2A; TFAP2A; TFAP2A; TFAP2A; TFAP2A; TFAP2A; TFAP2A; TFAP2A; TFAP2A; TFAP2A; TFAP2A; TFAP2B; TFAP2B; TFAP2B; TFAP2B; TFAP2B; TFAP2B; TFAP2B; TFAP2B; TFAP2C; TFAP2C; TFAP2C; TFAP2C; TFAP2C; TFAP2C; TFAP2C; TFAP2C; TFAP2C; TFAP2C; TFAP2C; TFAP2C; TFAP2C; TFAP2C; TFAP2D; TFAP2D; TFAP2D; TFAP2E; TFAP2E; TFAP2E; TFAP2E; TFAP2E; TFAP2E; ZNF611; ZNF611 (directAnnotation). TFAP2A; TFAP2A; TFAP2A; TFAP2A; TFAP2A; TFAP2A; TFAP2A; TFAP2A; TFAP2A; TFAP2A; TFAP2A; TFAP2B; TFAP2B; TFAP2B; TFAP2B; TFAP2B; TFAP2B; TFAP2B; TFAP2B; TFAP2B; TFAP2C; TFAP2C; TFAP2C; TFAP2C; TFAP2C; TFAP2C; TFAP2C; TFAP2C; TFAP2C; TFAP2C; TFAP2D; TFAP2D; TFAP2D; TFAP2D; TFAP2D; TFAP2D; TFAP2E; TFAP2E; TFAP2E; TFAP2E; TFAP2E; TFAP2E; TFAP2E (inferredBy_Orthology).
GPATCH2Lmetacluster_133.1ZNF304; ZNF304; ZSCAN22 (directAnnotation).
GPATCH2Lkznf__ZNF682_Isakova2017_SMiLE-seqZNF682 (directAnnotation).
GPATCH2Ltransfac_pro__M01219SP1 (directAnnotation). SP3 (inferredBy_Orthology).
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Acts as a transcription factor

check buttonThis table shows that this differential gene acts as a transcription factor.

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Acts as a drug target

check buttonThis table shows that this differential gene acts as a drug target.



1"Sun X, Zhang Y, Li H, Zhou Y, Shi S, Chen Z, He X, Zhang H, Li F, Yin J, Mou M, Wang Y, Qiu Y, Zhu F. DRESIS: the first comprehensive landscape of drug resistance information. Nucleic Acids Res. 2023 Jan 6;51(D1):D1263-D1275. doi: 10.1093/nar/gkac812. PMID: 36243960; PMCID: PMC9825618."
2"Wishart DS, Feunang YD, Guo AC, Lo EJ, Marcu A, Grant JR, Sajed T, Johnson D, Li C, Sayeeda Z, Assempour N, Iynkkaran I, Liu Y, Maciejewski A, Gale N, Wilson A, Chin L, Cummings R, Le D, Pon A, Knox C, Wilson M. DrugBank 5.0: a major update to the DrugBank database for 2018. Nucleic Acids Res. 2018 Jan 4;46(D1):D1074-D1082. doi: 10.1093/nar/gkx1037. PMID: 29126136; PMCID: PMC5753335."