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Center for Computational Systems Medicine
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Gene summary

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Datasets with differential expression of this gene

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Expression of this gene in the resistant group across all datasets and cell types

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Significant ligand-receptor pairs related to this gene (This gene does not contain this module)

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Known drug resistance mechanisms of this gene (This gene does not contain this module)

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MicroRNAs (miRNAs) regulating this gene

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Motifs and transcription factors (TFs) regulating this gene

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Acts as a transcription factor (This gene does not contain this module)

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Acts as a drug target< (This gene does not contain this module)

Gene: GPATCH2

Summary for GPATCH2

Gene informationGene symbol

GPATCH2

Ensembl ID

ENSG00000092978

Entrez ID

55105

Gene nameG-patch domain containing 2
SynonymsCT110|FLJ10252|GPATC2|Pfa1|PPP1R30
Gene typeprotein_coding
UniProtAcc

Q9NW75


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Dataset with differentially expressed gene: GPATCH2

check buttonDifferentially expression genes between the resistant and sensitive groups. A positive avg_log2FC represents significantly high expression in the resistant group, while a negative avg_log2FC represents significantly low expression in the resistant group.
DatasetSourceTissueCancer type level1Cancer type level2Drug typeRegimenTimepointCell typeavg_log2FCp_val_adj

GSE186960

Panc1 cell lineCell linePancreatic cancerPancreatic ductal adenocarcinoma (PDAC)ChemotherapygemcitabineNAMalignant cells0.2890611.35e-18

GSE189460

patientsBone marrow aspirateMultiple myelomaMultiple myeloma (MM)Targeted therapybortezomib + melphalan + prednisolonepreMalignant cells0.2606610.00e+00

GSE175716

PDXTumor tissueLiver cancerAdvanced hepatocellular carcinomaTargeted therapysorafenibNAMalignant cells-0.2734922.91e-19

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Expression of GPATCH2 in the resistant group across all datasets and cell types

check buttonRed dots represent significantly high expression in the resistant group, while blue dots represent significantly low expression in the resistant group. White dots represent that there is no significant difference in the expression of this gene between the resistant and sensitive groups. Blank represents that this cell type is not present in this dataset. (If the image exists, the user can click on it to enlarge it in a new window.)
boxplot

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Significant ligand-receptor pairs related to GPATCH2

check buttonThis table shows the significant ligand-receptor pairs related to this gene across all datasets, timepoints and conditions. (Complete files can be downloaded from the download section.)

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Known drug resistance mechanisms of this gene

check buttonThis table shows the known drug resistance mechanisms of this gene. Clicking on this gene will link to another database that displays more drug resistance-related information.

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MicroRNAs (miRNA) regulating GPATCH2

check buttonThis table shows the miRNAs with a score of more than 80 regulating this gene. (Complete files can be downloaded from the download section.)
Gene symbolmiRNAScoreGeneBank accession
GPATCH2hsa-miR-428298.7652NM_018040
GPATCH2hsa-miR-316398.0438NM_018040
GPATCH2hsa-miR-1304-5p95.6284NM_018040
GPATCH2hsa-miR-16-2-3p94.7787NM_018040
GPATCH2hsa-miR-195-3p94.7787NM_018040
GPATCH2hsa-miR-887-5p94.507NM_018040
GPATCH2hsa-miR-568294.3499NM_018040
GPATCH2hsa-miR-6757-5p94.1422NM_018040
GPATCH2hsa-miR-20a-3p94.0835NM_018040
GPATCH2hsa-miR-30c-1-3p93.7747NM_018040
GPATCH2hsa-miR-30c-2-3p93.7747NM_018040
GPATCH2hsa-miR-6788-5p93.7747NM_018040
GPATCH2hsa-miR-397793.6694NM_018040
GPATCH2hsa-miR-449593.3327NM_001297754
GPATCH2hsa-miR-548e-5p93.1676NM_018040
GPATCH2hsa-miR-561-5p93.1584NM_018040
GPATCH2hsa-miR-302a-5p91.1156NM_018040
GPATCH2hsa-miR-367290.2435NM_018040
GPATCH2hsa-miR-6864-3p90.2435NM_018040
GPATCH2hsa-miR-766-3p90.1666NM_001297754
GPATCH2hsa-miR-548z89.9332NM_001297754
GPATCH2hsa-miR-548ac89.9332NM_001297754
GPATCH2hsa-miR-548d-3p89.9332NM_001297754
GPATCH2hsa-miR-548bb-3p89.9332NM_001297754
GPATCH2hsa-miR-548h-3p89.9332NM_001297754
GPATCH2hsa-miR-450089.9291NM_018040
GPATCH2hsa-miR-20a-5p89.7725NM_018040
GPATCH2hsa-miR-106b-5p89.7725NM_018040
GPATCH2hsa-miR-29a-3p89.586NM_018040
GPATCH2hsa-miR-29c-3p89.586NM_018040
GPATCH2hsa-miR-29b-3p89.586NM_018040
GPATCH2hsa-miR-101-3p89.2632NM_001297754
GPATCH2hsa-miR-5571-5p88.1783NM_018040
GPATCH2hsa-miR-6731-3p87.648NM_018040
GPATCH2hsa-miR-767-3p87.2869NM_018040
GPATCH2hsa-miR-892c-5p86.6263NM_001297754
GPATCH2hsa-miR-194-5p86.2018NM_018040
GPATCH2hsa-miR-450a-1-3p85.9899NM_018040
GPATCH2hsa-miR-7-2-3p85.8462NM_018040
GPATCH2hsa-miR-7-1-3p85.8462NM_018040
GPATCH2hsa-miR-20b-5p85.8024NM_018040
GPATCH2hsa-miR-526b-3p85.8024NM_018040
GPATCH2hsa-miR-17-5p85.8024NM_018040
GPATCH2hsa-miR-519d-3p85.8024NM_018040
GPATCH2hsa-miR-106a-5p85.8024NM_018040
GPATCH2hsa-miR-93-5p85.8024NM_018040
GPATCH2hsa-miR-548c-3p85.798NM_001297754
GPATCH2hsa-miR-513c-5p85.7759NM_018040
GPATCH2hsa-miR-514b-5p85.7759NM_018040
GPATCH2hsa-miR-548aj-3p85.7385NM_001297754
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Motifs and transcription factors (TFs) regulating GPATCH2

check buttonThis table shows the Motifs and transcription factors (TFs) regulating this gene. (Complete files can be downloaded from the download section.)
Gene symbolmotifTF_highConf
GPATCH2tfdimers__MD00038TFAP2C (directAnnotation).
GPATCH2metacluster_175.1ZNF283 (directAnnotation).
GPATCH2metacluster_151.2ZNF23 (directAnnotation).
GPATCH2taipale_tf_pairs__GCM1_ELF1_GTGCGGGCGGAAGTN_CAP_reprELF1; GCM1 (directAnnotation).
GPATCH2metacluster_15.3E2F1; E2F6; E2F8; E2F8; TFDP1 (directAnnotation). E2F3 (inferredBy_Orthology).
GPATCH2hdpi__TP73TP73 (directAnnotation).
GPATCH2jaspar__MA0748.2YY2 (directAnnotation).
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Acts as a transcription factor

check buttonThis table shows that this differential gene acts as a transcription factor.

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Acts as a drug target

check buttonThis table shows that this differential gene acts as a drug target.



1"Sun X, Zhang Y, Li H, Zhou Y, Shi S, Chen Z, He X, Zhang H, Li F, Yin J, Mou M, Wang Y, Qiu Y, Zhu F. DRESIS: the first comprehensive landscape of drug resistance information. Nucleic Acids Res. 2023 Jan 6;51(D1):D1263-D1275. doi: 10.1093/nar/gkac812. PMID: 36243960; PMCID: PMC9825618."
2"Wishart DS, Feunang YD, Guo AC, Lo EJ, Marcu A, Grant JR, Sajed T, Johnson D, Li C, Sayeeda Z, Assempour N, Iynkkaran I, Liu Y, Maciejewski A, Gale N, Wilson A, Chin L, Cummings R, Le D, Pon A, Knox C, Wilson M. DrugBank 5.0: a major update to the DrugBank database for 2018. Nucleic Acids Res. 2018 Jan 4;46(D1):D1074-D1082. doi: 10.1093/nar/gkx1037. PMID: 29126136; PMCID: PMC5753335."