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Center for Computational Systems Medicine
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Gene summary

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Datasets with differential expression of this gene

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Expression of this gene in the resistant group across all datasets and cell types

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Significant ligand-receptor pairs related to this gene (This gene does not contain this module)

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Known drug resistance mechanisms of this gene (This gene does not contain this module)

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MicroRNAs (miRNAs) regulating this gene

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Motifs and transcription factors (TFs) regulating this gene

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Acts as a transcription factor (This gene does not contain this module)

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Acts as a drug target< (This gene does not contain this module)

Gene: CELF2

Summary for CELF2

Gene informationGene symbol

CELF2

Ensembl ID

ENSG00000048740

Entrez ID

10659

Gene nameCUGBP Elav-like family member 2
SynonymsBRUNOL3|CUGBP2|Etr-3|NAPOR-2
Gene typeprotein_coding
UniProtAcc

NA


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Dataset with differentially expressed gene: CELF2

check buttonDifferentially expression genes between the resistant and sensitive groups. A positive avg_log2FC represents significantly high expression in the resistant group, while a negative avg_log2FC represents significantly low expression in the resistant group.
DatasetSourceTissueCancer type level1Cancer type level2Drug typeRegimenTimepointCell typeavg_log2FCp_val_adj

GSE138267

CDXTumor tissueLung cancerSmall cell lung cancer (SCLC)ChemotherapyNANAMalignant cells0.4120520.00e+00

GSE169246_PacBlood

patientsPeripheral blood mononuclear cellsBreast cancerAdvanced triple-negative breast cancer (TNBC)ChemotherapypaclitaxelprecDCs0.4794862.68e-04

GSE169246_PacBlood

patientsPeripheral blood mononuclear cellsBreast cancerAdvanced triple-negative breast cancer (TNBC)ChemotherapypaclitaxelpreMono/Macro0.5613640.00e+00

GSE169246_PacBlood

patientsPeripheral blood mononuclear cellsBreast cancerAdvanced triple-negative breast cancer (TNBC)ChemotherapypaclitaxelpreB cells0.3398530.00e+00

GSE169246_PacBlood

patientsPeripheral blood mononuclear cellsBreast cancerAdvanced triple-negative breast cancer (TNBC)ChemotherapypaclitaxelpreCD4+ T cells0.4938360.00e+00

GSE169246_PacBlood

patientsPeripheral blood mononuclear cellsBreast cancerAdvanced triple-negative breast cancer (TNBC)ChemotherapypaclitaxelpreNK cells0.5379920.00e+00

GSE169246_PacTissue

patientsTumor tissueBreast cancerAdvanced triple-negative breast cancer (TNBC)ChemotherapypaclitaxelpreB cells0.2545974.68e-09

GSE153697

patientsBone marrow aspirateAcute lymphoblastic leukemiaRelapsed B-cell acute lymphoblastic leukemia (B-ALL)Immunotherapyanti-CD19 CAR-TNAMalignant cells-0.3319583.02e-10

GSE169246_PacAteBlood

patientsPeripheral blood mononuclear cellsBreast cancerAdvanced triple-negative breast cancer (TNBC)Immunotherapyatezolizumab + paclitaxelpreMono/Macro0.301244.62e-30

GSE164551

patientsBone marrow aspirateMultiple myelomaRefractory multiple myeloma (MM)ImmunotherapyCAR-TNAMono/Macro0.500382.15e-13

PMID34715028

patientsTumor tissueKidney cancerClear cell renal cell carcinoma (ccRCC)ImmunotherapynivolumabpostCD8+ T cells0.6706140.00e+00

PMID34715028

patientsTumor tissueKidney cancerClear cell renal cell carcinoma (ccRCC)ImmunotherapynivolumabpostCD4+ T cells0.6348610.00e+00

GSE189460

patientsBone marrow aspirateMultiple myelomaMultiple myeloma (MM)Targeted therapybortezomib + melphalan + prednisolonepreMalignant cells0.3533410.00e+00

GSE199333

patientsBone marrow aspirateAcute myeloid leukemiaPrimary FLT3-ITD-mutated acute myeloid leukemia (AML)Targeted therapygilteritinibpostNK cells0.3155026.72e-25

GSE108397

451Lu cell lineCell lineMelanomaMelanomaTargeted therapyPLX-4720NAMalignant cells-0.2645865.50e-24

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Expression of CELF2 in the resistant group across all datasets and cell types

check buttonRed dots represent significantly high expression in the resistant group, while blue dots represent significantly low expression in the resistant group. White dots represent that there is no significant difference in the expression of this gene between the resistant and sensitive groups. Blank represents that this cell type is not present in this dataset. (If the image exists, the user can click on it to enlarge it in a new window.)
boxplot

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Significant ligand-receptor pairs related to CELF2

check buttonThis table shows the significant ligand-receptor pairs related to this gene across all datasets, timepoints and conditions. (Complete files can be downloaded from the download section.)

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Known drug resistance mechanisms of this gene

check buttonThis table shows the known drug resistance mechanisms of this gene. Clicking on this gene will link to another database that displays more drug resistance-related information.

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MicroRNAs (miRNA) regulating CELF2

check buttonThis table shows the miRNAs with a score of more than 80 regulating this gene. (Complete files can be downloaded from the download section.)
Gene symbolmiRNAScoreGeneBank accession
CELF2hsa-miR-548aq-3p99.4321NM_001025077
CELF2hsa-miR-548ah-3p99.4321NM_001025077
CELF2hsa-miR-548ae-3p99.4321NM_001025077
CELF2hsa-miR-548j-3p99.4321NM_001025077
CELF2hsa-miR-548am-3p99.4321NM_001025077
CELF2hsa-miR-548aj-3p99.2859NM_001025077
CELF2hsa-miR-548x-3p99.2859NM_001025077
CELF2hsa-miR-568899.055NM_001025077
CELF2hsa-miR-4795-3p98.8136NM_001025077
CELF2hsa-miR-495-3p98.2234NM_001025077
CELF2hsa-miR-365895.9271NM_001025077
CELF2hsa-miR-132495.6981NM_001025077
CELF2hsa-miR-4717-3p95.1651NM_001025077
CELF2hsa-miR-4446-5p94.8378NM_001025077
CELF2hsa-miR-5011-5p94.74NM_001025076
CELF2hsa-miR-23c94.6842NM_001025077
CELF2hsa-miR-23b-3p94.6842NM_001025077
CELF2hsa-miR-23a-3p94.6842NM_001025077
CELF2hsa-miR-302e94.6016NM_001025077
CELF2hsa-miR-316394.5699NM_001025076
CELF2hsa-miR-545-3p94.4454NM_001025077
CELF2hsa-miR-183-5p94.2542NM_001025077
CELF2hsa-miR-9983-3p93.4842NM_001025076
CELF2hsa-miR-7844-5p92.5324NM_001025077
CELF2hsa-miR-126-5p92.2252NM_001025077
CELF2hsa-miR-708-3p91.8341NM_001025077
CELF2hsa-miR-4753-3p91.6234NM_001025077
CELF2hsa-miR-129-5p90.823NM_001025076
CELF2hsa-miR-2682-5p90.8052NM_001025077
CELF2hsa-miR-590-3p90.4627NM_001025076
CELF2hsa-miR-34b-5p90.3959NM_001025077
CELF2hsa-miR-449c-5p90.3959NM_001025077
CELF2hsa-miR-4649-3p90.2602NM_001025077
CELF2hsa-miR-392490.0045NM_001025077
CELF2hsa-miR-129789.9485NM_001025077
CELF2hsa-miR-5587-5p89.7481NM_001025077
CELF2hsa-miR-6756-3p89.5595NM_001025077
CELF2hsa-miR-3127-3p89.5595NM_001025077
CELF2hsa-miR-467289.2753NM_001025077
CELF2hsa-miR-366289.109NM_001025077
CELF2hsa-miR-4735-5p89.091NM_001025077
CELF2hsa-miR-548p88.869NM_001025077
CELF2hsa-miR-5006-3p88.552NM_001025077
CELF2hsa-miR-4755-5p88.552NM_001025077
CELF2hsa-miR-3120-3p88.515NM_001025077
CELF2hsa-miR-302b-3p88.4194NM_001025077
CELF2hsa-miR-302a-3p88.4194NM_001025077
CELF2hsa-miR-302c-3p88.4194NM_001025077
CELF2hsa-miR-302d-3p88.4194NM_001025077
CELF2hsa-miR-10527-5p88.2379NM_001025077
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Motifs and transcription factors (TFs) regulating CELF2

check buttonThis table shows the Motifs and transcription factors (TFs) regulating this gene. (Complete files can be downloaded from the download section.)
Gene symbolmotifTF_highConf
CELF2metacluster_7.13ZFX (directAnnotation).
CELF2cisbp__M01863ZNF711 (inferredBy_Orthology).
CELF2taipale_tf_pairs__ETS2_RCCGGAAGTG_HTETS2 (directAnnotation).
CELF2transfac_pro__M05578ZFP92 (inferredBy_Orthology).
CELF2jaspar__MA1483.2ELF2 (directAnnotation).
CELF2metacluster_151.2ZNF23 (directAnnotation).
CELF2metacluster_170.2KLF1; KLF10; KLF10; KLF11; KLF11; KLF11; KLF12; KLF12; KLF14; KLF15; KLF17; KLF2; KLF5; KLF7; KLF7; KLF8; MAZ; MAZ; PATZ1; SP1; SP1; SP1; SP2; SP2; SP2; SP2; SP2; SP2; SP2; SP2; SP4; SP4; SP5; SP6; SP7; SP8; SP9; ZNF281 (directAnnotation). E2F1; E2F4; KLF10; KLF13; KLF14; KLF17; KLF2; KLF7; SP1; SP1; SP3; SP4; SP5; SP6; SP7 (inferredBy_Orthology).
CELF2transfac_pro__M05479ZNF580 (directAnnotation).
CELF2metacluster_155.23BCL11B; ZNF711; ZNF711 (directAnnotation). ZFY (inferredBy_Orthology).
CELF2kznf__ZNF783_Imbeault2017_OM_MEMEZNF783 (directAnnotation).
CELF2metacluster_144.3ZNF704; ZNF704 (directAnnotation).
CELF2hdpi__ETV4ETV4 (directAnnotation).
CELF2transfac_pro__M06071ZNF814 (directAnnotation).
CELF2homer__TWVGGTCCGC_HINFPHINFP (directAnnotation).
CELF2metacluster_135.10MBD2; MBD2; MECP2; MECP2 (directAnnotation).
CELF2jaspar__MA1933.1SREBF2 (directAnnotation).
CELF2jaspar__MA0079.5SP1 (directAnnotation).
CELF2taipale_tf_pairs__GCM1_SPDEF_RTGNKGGCGGAWG_CAP_reprGCM1; SPDEF (directAnnotation).
CELF2transfac_pro__M01219SP1 (directAnnotation). SP3 (inferredBy_Orthology).
CELF2transfac_pro__M07397ZNF148 (directAnnotation).
CELF2metacluster_131.7EGR1; EGR1; EGR1; EGR1; EGR1; EGR1; EGR1; EGR1; EGR1; EGR1; EGR1; EGR1; EGR1; EGR1; EGR1; EGR1; EGR1; EGR2; EGR2; EGR2; EGR2; EGR2; EGR2; EGR3; EGR3; EGR3; EGR3; EGR3; EGR3; EGR4; EGR4; WT1 (directAnnotation). EGR1; EGR1; EGR1; EGR1; EGR1; EGR2; EGR2; EGR2; EGR2; EGR2; EGR3; EGR3; WT1; ZBTB43; ZBTB43; ZBTB43; ZBTB43; ZBTB5; ZBTB5; ZBTB5; ZBTB5; ZBTB7A; ZBTB7A; ZBTB7A; ZBTB7A; ZNF367; ZNF367; ZNF367; ZNF367; ZNF740; ZNF740; ZNF740; ZNF740 (inferredBy_Orthology).
CELF2metacluster_131.4EGR2; EGR2; ZFHX2; ZNF141 (directAnnotation).
CELF2taipale_cyt_meth__ZNF281_NCCCCTCCCCCN_eDBD_methZNF281 (directAnnotation).
CELF2metacluster_15.2E2F1; E2F1; E2F1; E2F1; E2F1; E2F3; E2F4; E2F4; E2F4; E2F6; E2F6; E2F6; E2F6; E2F6; E2F6; E2F6; E2F7; TFDP1; TFDP2; ZNF566; ZNF566; ZNF574 (directAnnotation). E2F3; E2F3; E2F4 (inferredBy_Orthology).
CELF2metacluster_3.11SP1; SP1; SP2; SP3; SP3; SP4 (directAnnotation).
CELF2homer__GGGGGGGG_MazMAZ (directAnnotation).
CELF2transfac_pro__M01175ZBTB7B (directAnnotation).
CELF2taipale_cyt_meth__ZNF460_NRMCGCCCCCCGN_eDBD_methZNF460 (directAnnotation).
CELF2tfdimers__MD00151CHURC1 (directAnnotation).
CELF2metacluster_3.7SP1; SP1; SP1; SP1; SP1; SP1; SP1; SP1; SP2; SP2; SP2; SP2; SP3; SP3; SP3; SP4; SP4; SP4; SP4; SP4; SP4; SP5 (directAnnotation).
CELF2metacluster_15.1E2F4; E2F4; E2F4; E2F4; E2F7; ZFP69B (directAnnotation). E2F4 (inferredBy_Orthology).
CELF2transfac_pro__M01303SP1 (directAnnotation).
CELF2metacluster_141.5NR3C1; THAP1; YY1; YY1; YY1; YY1; YY1; YY1; YY1; YY1; YY1; YY1; YY1; YY1; YY2; YY2; ZNF597 (directAnnotation). YY1; YY1; YY1; YY2; ZFP42 (inferredBy_Orthology).
CELF2swissregulon__hs__CHD1CHD1 (directAnnotation).
CELF2transfac_pro__M02090E2F4 (directAnnotation).
CELF2transfac_pro__M01714KLF15 (directAnnotation).
CELF2metacluster_15.3E2F1; E2F6; E2F8; E2F8; TFDP1 (directAnnotation). E2F3 (inferredBy_Orthology).
CELF2jaspar__MA1122.1TFDP1 (directAnnotation).
CELF2hocomoco__PROX1_HUMAN.H11MO.0.DPROX1 (directAnnotation).
CELF2transfac_pro__M02089E2F3 (directAnnotation).
CELF2metacluster_3.14WT1; WT1 (directAnnotation).
CELF2metacluster_3.4SP1; SP2; SP2; SP3 (directAnnotation).
CELF2metacluster_126.3LIN28B; LIN28B (directAnnotation).
CELF2hocomoco__EGR4_HUMAN.H11MO.0.DEGR4 (directAnnotation).
CELF2metacluster_3.5KLF14; KLF15; KLF15; KLF16 (directAnnotation).
CELF2cisbp__M07938E2F1 (directAnnotation).
CELF2homer__GGCGGGAARN_E2F6E2F6 (directAnnotation).
CELF2transfac_pro__M07436WT1 (directAnnotation).
CELF2transfac_pro__M02281SP1 (directAnnotation).
CELF2taipale_tf_pairs__GCM1_ELF1_GTGCGGGCGGAAGTN_CAP_reprELF1; GCM1 (directAnnotation).
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Acts as a transcription factor

check buttonThis table shows that this differential gene acts as a transcription factor.

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Acts as a drug target

check buttonThis table shows that this differential gene acts as a drug target.



1"Sun X, Zhang Y, Li H, Zhou Y, Shi S, Chen Z, He X, Zhang H, Li F, Yin J, Mou M, Wang Y, Qiu Y, Zhu F. DRESIS: the first comprehensive landscape of drug resistance information. Nucleic Acids Res. 2023 Jan 6;51(D1):D1263-D1275. doi: 10.1093/nar/gkac812. PMID: 36243960; PMCID: PMC9825618."
2"Wishart DS, Feunang YD, Guo AC, Lo EJ, Marcu A, Grant JR, Sajed T, Johnson D, Li C, Sayeeda Z, Assempour N, Iynkkaran I, Liu Y, Maciejewski A, Gale N, Wilson A, Chin L, Cummings R, Le D, Pon A, Knox C, Wilson M. DrugBank 5.0: a major update to the DrugBank database for 2018. Nucleic Acids Res. 2018 Jan 4;46(D1):D1074-D1082. doi: 10.1093/nar/gkx1037. PMID: 29126136; PMCID: PMC5753335."