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Center for Computational Systems Medicine
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Gene summary

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Datasets with differential expression of this gene

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Expression of this gene in the resistant group across all datasets and cell types

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Significant ligand-receptor pairs related to this gene (This gene does not contain this module)

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Known drug resistance mechanisms of this gene (This gene does not contain this module)

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MicroRNAs (miRNAs) regulating this gene

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Motifs and transcription factors (TFs) regulating this gene

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Acts as a transcription factor (This gene does not contain this module)

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Acts as a drug target< (This gene does not contain this module)

Gene: ARFIP1

Summary for ARFIP1

Gene informationGene symbol

ARFIP1

Ensembl ID

ENSG00000164144

Entrez ID

27236

Gene nameADP ribosylation factor interacting protein 1
SynonymsHSU52521
Gene typeprotein_coding
UniProtAcc

P53367


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Dataset with differentially expressed gene: ARFIP1

check buttonDifferentially expression genes between the resistant and sensitive groups. A positive avg_log2FC represents significantly high expression in the resistant group, while a negative avg_log2FC represents significantly low expression in the resistant group.
DatasetSourceTissueCancer type level1Cancer type level2Drug typeRegimenTimepointCell typeavg_log2FCp_val_adj

GSE175716

PDXTumor tissueLiver cancerAdvanced hepatocellular carcinomaTargeted therapysorafenibNAMalignant cells-0.3493052.96e-31

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Expression of ARFIP1 in the resistant group across all datasets and cell types

check buttonRed dots represent significantly high expression in the resistant group, while blue dots represent significantly low expression in the resistant group. White dots represent that there is no significant difference in the expression of this gene between the resistant and sensitive groups. Blank represents that this cell type is not present in this dataset. (If the image exists, the user can click on it to enlarge it in a new window.)
boxplot

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Significant ligand-receptor pairs related to ARFIP1

check buttonThis table shows the significant ligand-receptor pairs related to this gene across all datasets, timepoints and conditions. (Complete files can be downloaded from the download section.)

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Known drug resistance mechanisms of this gene

check buttonThis table shows the known drug resistance mechanisms of this gene. Clicking on this gene will link to another database that displays more drug resistance-related information.

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MicroRNAs (miRNA) regulating ARFIP1

check buttonThis table shows the miRNAs with a score of more than 80 regulating this gene. (Complete files can be downloaded from the download section.)
Gene symbolmiRNAScoreGeneBank accession
ARFIP1hsa-miR-371b-5p99.2445NM_001025595
ARFIP1hsa-miR-373-5p99.2445NM_001025595
ARFIP1hsa-miR-616-5p99.2445NM_001025595
ARFIP1hsa-miR-453398.2356NM_001025595
ARFIP1hsa-miR-316396.0252NM_001025593
ARFIP1hsa-miR-4700-5p95.931NM_001025595
ARFIP1hsa-miR-4667-5p95.7844NM_001025595
ARFIP1hsa-miR-808995.7844NM_001025595
ARFIP1hsa-miR-5582-5p95.5909NM_001025593
ARFIP1hsa-miR-6792-5p95.3693NM_001025593
ARFIP1hsa-miR-320d94.2426NM_001025593
ARFIP1hsa-miR-320b94.2426NM_001025593
ARFIP1hsa-miR-442994.2426NM_001025593
ARFIP1hsa-miR-320c94.2426NM_001025593
ARFIP1hsa-miR-320a-3p94.2426NM_001025593
ARFIP1hsa-miR-125b-2-3p94.0419NM_001025593
ARFIP1hsa-miR-876-5p92.1433NM_001025593
ARFIP1hsa-miR-316792.0402NM_001025593
ARFIP1hsa-miR-467991.7345NM_001025595
ARFIP1hsa-miR-5584-5p91.3493NM_001025595
ARFIP1hsa-miR-19b-3p91.028NM_001025593
ARFIP1hsa-miR-19a-3p91.028NM_001025593
ARFIP1hsa-miR-6716-5p90.9809NM_001025593
ARFIP1hsa-miR-4697-3p89.8029NM_001025593
ARFIP1hsa-miR-9-3p89.3347NM_001025593
ARFIP1hsa-miR-3692-5p89.0294NM_001025595
ARFIP1hsa-miR-4762-5p88.6778NM_001025593
ARFIP1hsa-miR-3613-3p87.7272NM_001025595
ARFIP1hsa-miR-130587.6787NM_001025593
ARFIP1hsa-miR-6516-3p87.2187NM_001025595
ARFIP1hsa-miR-148b-3p87.1264NM_001025593
ARFIP1hsa-miR-152-3p87.1264NM_001025593
ARFIP1hsa-miR-148a-3p87.1264NM_001025593
ARFIP1hsa-miR-1468-3p87.0414NM_001025593
ARFIP1hsa-miR-124-3p86.3796NM_001025593
ARFIP1hsa-miR-506-3p86.3796NM_001025593
ARFIP1hsa-miR-541-5p86.0614NM_001025593
ARFIP1hsa-miR-314885.8245NM_001025593
ARFIP1hsa-miR-364685.6425NM_001025595
ARFIP1hsa-miR-7155-5p85.4875NM_001025595
ARFIP1hsa-miR-607185.4663NM_001025593
ARFIP1hsa-miR-63785.2916NM_001025595
ARFIP1hsa-miR-216b-5p85.1348NM_001025595
ARFIP1hsa-miR-548aw85.0822NM_001025593
ARFIP1hsa-miR-612482.4964NM_001025593
ARFIP1hsa-miR-153-5p81.8913NM_001025595
ARFIP1hsa-miR-302d-5p81.4772NM_001025595
ARFIP1hsa-miR-302b-5p81.4772NM_001025595
ARFIP1hsa-miR-3200-5p81.4436NM_001025595
ARFIP1hsa-miR-607481.3739NM_001025595
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Motifs and transcription factors (TFs) regulating ARFIP1

check buttonThis table shows the Motifs and transcription factors (TFs) regulating this gene. (Complete files can be downloaded from the download section.)
Gene symbolmotifTF_highConf
ARFIP1metacluster_135.11NR2C2 (directAnnotation).
ARFIP1metacluster_135.10MBD2; MBD2; MECP2; MECP2 (directAnnotation).
ARFIP1cisbp__M00341PAX6 (directAnnotation).
ARFIP1jaspar__MA0185.1DEAF1 (inferredBy_Orthology).
ARFIP1metacluster_61.1DEAF1; DEAF1 (directAnnotation).
ARFIP1metacluster_175.1ZNF283 (directAnnotation).
ARFIP1transfac_pro__M02844BCL6B (inferredBy_Orthology).
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Acts as a transcription factor

check buttonThis table shows that this differential gene acts as a transcription factor.

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Acts as a drug target

check buttonThis table shows that this differential gene acts as a drug target.



1"Sun X, Zhang Y, Li H, Zhou Y, Shi S, Chen Z, He X, Zhang H, Li F, Yin J, Mou M, Wang Y, Qiu Y, Zhu F. DRESIS: the first comprehensive landscape of drug resistance information. Nucleic Acids Res. 2023 Jan 6;51(D1):D1263-D1275. doi: 10.1093/nar/gkac812. PMID: 36243960; PMCID: PMC9825618."
2"Wishart DS, Feunang YD, Guo AC, Lo EJ, Marcu A, Grant JR, Sajed T, Johnson D, Li C, Sayeeda Z, Assempour N, Iynkkaran I, Liu Y, Maciejewski A, Gale N, Wilson A, Chin L, Cummings R, Le D, Pon A, Knox C, Wilson M. DrugBank 5.0: a major update to the DrugBank database for 2018. Nucleic Acids Res. 2018 Jan 4;46(D1):D1074-D1082. doi: 10.1093/nar/gkx1037. PMID: 29126136; PMCID: PMC5753335."