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lncRNA: ENSG00000281641 |
Summary for SAMD12-AS1 |
Gene summary |
Gene information | Ensembl ID | ENSG00000281641 | Gene symbol | SAMD12-AS1 |
Gene name | SAMD12 antisense RNA 1 | |
HGNC | 30937 | |
Entrez ID | ||
Gene type | lincRNA | |
Synonyms | 08q24.12|SAMD12-AS1 | |
UniProtAcc |
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Structure and expression level for SAMD12-AS1 |
AS events and RNA A-to-I editing events of lncRNA in TCGA based on Genvode V22 structure. |
Differentially expressed gene analysis between cancer and normal samples. |
Ensembl ID | Base mean | log2FC(AD/control) | lfcSE | Stat | P-value | Adjc.p-value | DEG direction | Cancer type |
ENSG00000281641 | 5.344751e+01 | 2.245587e+00 | 2.425816e-01 | 9.257037e+00 | 2.100000e-20 | 1.400000e-19 | UP | LUSC |
Correlation between lncRNAs and cancer stages. |
LncRNA Ensembl ID | Correlation | P-value | Cancer Type | Adjc.p-value |
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lncRNA-Protein interaction for SAMD12-AS1 |
lncRNA-epigenetic factor interaction (#cancer types with positive correlation >= 5). |
LncRNA Ensembl ID | LncRNA ENST ID | LncRNA Name | Protein Ensembl ID | Protein Name | CatRAPID Score | Lncpro Score | UniPortID | Gene Subtype | Public source |
lncRNA-transcript factor interaction (#cancer types with positive correlation >= 5). |
LncRNA Ensembl ID | LncRNA ENST ID | LncRNA Name | Protein Ensembl ID | Protein Name | CatRAPID Score | Lncpro Score | UniPortID | Gene Subtype | Public source |
lncRNA-RNA binding protein interaction (#cancer types with positive correlation >= 5). |
LncRNA Ensembl ID | LncRNA ENST ID | LncRNA Name | Protein Ensembl ID | Protein Name | CatRAPID Score | Lncpro Score | UniPortID | Gene Subtype | Public source |
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