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lncRNA: ENSG00000280734 |
Summary for LINC01232 |
Gene summary |
Gene information | Ensembl ID | ENSG00000280734 | Gene symbol | LINC01232 |
Gene name | long intergenic non-protein coding RNA 1232 | |
HGNC | 49755 | |
Entrez ID | ||
Gene type | processed_transcript | |
Synonyms | 13q32.3|LINC01232 | |
UniProtAcc |
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Structure and expression level for LINC01232 |
AS events and RNA A-to-I editing events of lncRNA in TCGA based on Genvode V22 structure. |
Differentially expressed gene analysis between cancer and normal samples. |
Ensembl ID | Base mean | log2FC(AD/control) | lfcSE | Stat | P-value | Adjc.p-value | DEG direction | Cancer type |
ENSG00000280734 | 3.593036e+02 | 1.617717e+00 | 2.516390e-01 | 6.428723e+00 | 1.290000e-10 | 2.660000e-09 | UP | BLCA |
ENSG00000280734 | 2.156770e+02 | 1.643494e+00 | 1.454501e-01 | 1.129937e+01 | 1.320000e-29 | 3.420000e-28 | UP | COAD |
ENSG00000280734 | 2.194110e+02 | 1.692380e+00 | 2.646063e-01 | 6.395840e+00 | 1.600000e-10 | 4.930000e-09 | UP | READ |
Correlation between lncRNAs and cancer stages. |
LncRNA Ensembl ID | Correlation | P-value | Cancer Type | Adjc.p-value |
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lncRNA-Protein interaction for LINC01232 |
lncRNA-epigenetic factor interaction (#cancer types with positive correlation >= 5). |
LncRNA Ensembl ID | LncRNA ENST ID | LncRNA Name | Protein Ensembl ID | Protein Name | CatRAPID Score | Lncpro Score | UniPortID | Gene Subtype | Public source |
lncRNA-transcript factor interaction (#cancer types with positive correlation >= 5). |
LncRNA Ensembl ID | LncRNA ENST ID | LncRNA Name | Protein Ensembl ID | Protein Name | CatRAPID Score | Lncpro Score | UniPortID | Gene Subtype | Public source |
lncRNA-RNA binding protein interaction (#cancer types with positive correlation >= 5). |
LncRNA Ensembl ID | LncRNA ENST ID | LncRNA Name | Protein Ensembl ID | Protein Name | CatRAPID Score | Lncpro Score | UniPortID | Gene Subtype | Public source |
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