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lncRNA: ENSG00000280623 |
Summary for PCAT14 |
Gene summary |
Gene information | Ensembl ID | ENSG00000280623 | Gene symbol | PCAT14 |
Gene name | prostate cancer associated transcript 14 | |
HGNC | 48977 | |
Entrez ID | ||
Gene type | lincRNA | |
Synonyms | 22q11.23|PCAT14 | |
UniProtAcc |
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Structure and expression level for PCAT14 |
AS events and RNA A-to-I editing events of lncRNA in TCGA based on Genvode V22 structure. |
Differentially expressed gene analysis between cancer and normal samples. |
Ensembl ID | Base mean | log2FC(AD/control) | lfcSE | Stat | P-value | Adjc.p-value | DEG direction | Cancer type |
ENSG00000280623 | 1.661461e+04 | 2.588475e+00 | 2.572426e-01 | 1.006239e+01 | 8.100000e-24 | 3.440000e-22 | UP | PRAD |
ENSG00000280623 | 3.736405e+01 | 3.888338e+00 | 1.044585e+00 | 3.722374e+00 | 1.973580e-04 | 1.368750e-03 | UP | READ |
Correlation between lncRNAs and cancer stages. |
LncRNA Ensembl ID | Correlation | P-value | Cancer Type | Adjc.p-value |
ENSG00000280623 | 3.276097e-01 | 2.986673e-15 | PRAD | 2.528373e-14 |
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lncRNA-Protein interaction for PCAT14 |
lncRNA-epigenetic factor interaction (#cancer types with positive correlation >= 5). |
LncRNA Ensembl ID | LncRNA ENST ID | LncRNA Name | Protein Ensembl ID | Protein Name | CatRAPID Score | Lncpro Score | UniPortID | Gene Subtype | Public source |
lncRNA-transcript factor interaction (#cancer types with positive correlation >= 5). |
LncRNA Ensembl ID | LncRNA ENST ID | LncRNA Name | Protein Ensembl ID | Protein Name | CatRAPID Score | Lncpro Score | UniPortID | Gene Subtype | Public source |
lncRNA-RNA binding protein interaction (#cancer types with positive correlation >= 5). |
LncRNA Ensembl ID | LncRNA ENST ID | LncRNA Name | Protein Ensembl ID | Protein Name | CatRAPID Score | Lncpro Score | UniPortID | Gene Subtype | Public source |
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