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lncRNA: ENSG00000278058 |
Summary for RP11-70D24.2 |
Gene summary |
Gene information | Ensembl ID | ENSG00000278058 | Gene symbol | RP11-70D24.2 |
Gene name | ||
HGNC | ||
Entrez ID | ||
Gene type | lincRNA | |
Synonyms | ||
UniProtAcc |
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Structure and expression level for RP11-70D24.2 |
AS events and RNA A-to-I editing events of lncRNA in TCGA based on Genvode V22 structure. |
Differentially expressed gene analysis between cancer and normal samples. |
Ensembl ID | Base mean | log2FC(AD/control) | lfcSE | Stat | P-value | Adjc.p-value | DEG direction | Cancer type |
ENSG00000278058 | 4.539733e+01 | -2.389356e+00 | 3.395062e-01 | -7.037739e+00 | 1.950000e-12 | 3.360000e-11 | DOWN | CHOL |
ENSG00000278058 | 1.714770e+02 | 1.197432e+00 | 1.408113e-01 | 8.503807e+00 | 1.830000e-17 | 9.530000e-17 | UP | KIRC |
ENSG00000278058 | 5.181994e+01 | -1.281844e+00 | 1.689383e-01 | -7.587645e+00 | 3.260000e-14 | 3.310000e-13 | DOWN | LIHC |
Correlation between lncRNAs and cancer stages. |
LncRNA Ensembl ID | Correlation | P-value | Cancer Type | Adjc.p-value |
ENSG00000278058 | -4.851969e-01 | 7.297984e-04 | CHOL | 1.328486e-03 |
ENSG00000278058 | 3.310349e-01 | 1.850422e-03 | MESO | 3.080133e-02 |
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lncRNA-Protein interaction for RP11-70D24.2 |
lncRNA-epigenetic factor interaction (#cancer types with positive correlation >= 5). |
LncRNA Ensembl ID | LncRNA ENST ID | LncRNA Name | Protein Ensembl ID | Protein Name | CatRAPID Score | Lncpro Score | UniPortID | Gene Subtype | Public source |
lncRNA-transcript factor interaction (#cancer types with positive correlation >= 5). |
LncRNA Ensembl ID | LncRNA ENST ID | LncRNA Name | Protein Ensembl ID | Protein Name | CatRAPID Score | Lncpro Score | UniPortID | Gene Subtype | Public source |
lncRNA-RNA binding protein interaction (#cancer types with positive correlation >= 5). |
LncRNA Ensembl ID | LncRNA ENST ID | LncRNA Name | Protein Ensembl ID | Protein Name | CatRAPID Score | Lncpro Score | UniPortID | Gene Subtype | Public source |
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