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lncRNA: ENSG00000277013 |
Summary for SUNO1 |
Gene summary |
Gene information | Ensembl ID | ENSG00000277013 | Gene symbol | SUNO1 |
Gene name | S-phase upregulated non-coding 1 | |
HGNC | 55385 | |
Entrez ID | ||
Gene type | lincRNA | |
Synonyms | SUNO1|19q13.11|CTC-526N19.1 | |
UniProtAcc |
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Structure and expression level for SUNO1 |
AS events and RNA A-to-I editing events of lncRNA in TCGA based on Genvode V22 structure. |
Differentially expressed gene analysis between cancer and normal samples. |
Ensembl ID | Base mean | log2FC(AD/control) | lfcSE | Stat | P-value | Adjc.p-value | DEG direction | Cancer type |
ENSG00000277013 | 1.144964e+02 | -2.756960e+00 | 2.842992e-01 | -9.697389e+00 | 3.090000e-22 | 6.170000e-21 | DOWN | KICH |
ENSG00000277013 | 4.712186e+02 | 2.261851e+00 | 2.074929e-01 | 1.090086e+01 | 1.140000e-27 | 1.090000e-26 | UP | LUSC |
ENSG00000277013 | 3.395345e+02 | 1.026431e+00 | 1.263961e-01 | 8.120749e+00 | 4.630000e-16 | 2.480000e-15 | UP | BRCA |
Correlation between lncRNAs and cancer stages. |
LncRNA Ensembl ID | Correlation | P-value | Cancer Type | Adjc.p-value |
ENSG00000277013 | -5.745744e-01 | 3.913905e-09 | KICH | 2.464537e-08 |
ENSG00000277013 | -3.239695e-01 | 2.687652e-15 | THCA | 5.211423e-14 |
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lncRNA-Protein interaction for SUNO1 |
lncRNA-epigenetic factor interaction (#cancer types with positive correlation >= 5). |
LncRNA Ensembl ID | LncRNA ENST ID | LncRNA Name | Protein Ensembl ID | Protein Name | CatRAPID Score | Lncpro Score | UniPortID | Gene Subtype | Public source |
lncRNA-transcript factor interaction (#cancer types with positive correlation >= 5). |
LncRNA Ensembl ID | LncRNA ENST ID | LncRNA Name | Protein Ensembl ID | Protein Name | CatRAPID Score | Lncpro Score | UniPortID | Gene Subtype | Public source |
lncRNA-RNA binding protein interaction (#cancer types with positive correlation >= 5). |
LncRNA Ensembl ID | LncRNA ENST ID | LncRNA Name | Protein Ensembl ID | Protein Name | CatRAPID Score | Lncpro Score | UniPortID | Gene Subtype | Public source |
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