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lncRNA: ENSG00000274605 |
Summary for PCCA-DT |
Gene summary |
Gene information | Ensembl ID | ENSG00000274605 | Gene symbol | PCCA-DT |
Gene name | PCCA divergent transcript | |
HGNC | 53266 | |
Entrez ID | 105370333 | |
Gene type | lincRNA | |
Synonyms | 13q32.3|RP11-12G12.7|PCCA-DT | |
UniProtAcc |
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Structure and expression level for PCCA-DT |
AS events and RNA A-to-I editing events of lncRNA in TCGA based on Genvode V22 structure. |
Differentially expressed gene analysis between cancer and normal samples. |
Ensembl ID | Base mean | log2FC(AD/control) | lfcSE | Stat | P-value | Adjc.p-value | DEG direction | Cancer type |
ENSG00000274605 | 1.713604e+02 | 1.663227e+00 | 3.143542e-01 | 5.290934e+00 | 1.220000e-07 | 1.240000e-06 | UP | GBM |
ENSG00000274605 | 1.552929e+02 | -1.251640e+00 | 1.011244e-01 | -1.237723e+01 | 3.470000e-35 | 4.520000e-34 | DOWN | KIRC |
ENSG00000274605 | 4.146046e+02 | 1.058569e+00 | 2.016047e-01 | 5.250714e+00 | 1.520000e-07 | 1.640000e-06 | UP | BLCA |
ENSG00000274605 | 5.350579e+02 | 2.003080e+00 | 4.726161e-01 | 4.238283e+00 | 2.250000e-05 | 3.518650e-04 | UP | CESC |
ENSG00000274605 | 3.254091e+02 | 1.761851e+00 | 1.381280e-01 | 1.275520e+01 | 2.920000e-37 | 1.510000e-35 | UP | UCEC |
ENSG00000274605 | 1.009864e+02 | -1.228130e+00 | 3.592615e-01 | -3.418486e+00 | 6.297060e-04 | 8.220782e-03 | DOWN | PCPG |
ENSG00000274605 | 4.665050e+02 | 2.325866e+00 | 1.272029e-01 | 1.828469e+01 | 1.100000e-74 | 5.900000e-73 | UP | LUSC |
ENSG00000274605 | 2.505407e+02 | 1.705072e+00 | 1.357531e-01 | 1.256010e+01 | 3.500000e-36 | 9.730000e-35 | UP | LUAD |
Correlation between lncRNAs and cancer stages. |
LncRNA Ensembl ID | Correlation | P-value | Cancer Type | Adjc.p-value |
ENSG00000274605 | -3.478813e-01 | 8.362852e-04 | KICH | 1.174296e-03 |
ENSG00000274605 | 3.434774e-01 | 1.071100e-17 | UCEC | 2.325818e-16 |
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lncRNA-Protein interaction for PCCA-DT |
lncRNA-epigenetic factor interaction (#cancer types with positive correlation >= 5). |
LncRNA Ensembl ID | LncRNA ENST ID | LncRNA Name | Protein Ensembl ID | Protein Name | CatRAPID Score | Lncpro Score | UniPortID | Gene Subtype | Public source |
lncRNA-transcript factor interaction (#cancer types with positive correlation >= 5). |
LncRNA Ensembl ID | LncRNA ENST ID | LncRNA Name | Protein Ensembl ID | Protein Name | CatRAPID Score | Lncpro Score | UniPortID | Gene Subtype | Public source |
lncRNA-RNA binding protein interaction (#cancer types with positive correlation >= 5). |
LncRNA Ensembl ID | LncRNA ENST ID | LncRNA Name | Protein Ensembl ID | Protein Name | CatRAPID Score | Lncpro Score | UniPortID | Gene Subtype | Public source |
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