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lncRNA: ENSG00000272221 |
Summary for XXbac-BPG181B23.7 |
Gene summary |
Gene information | Ensembl ID | ENSG00000272221 | Gene symbol | XXbac-BPG181B23.7 |
Gene name | ||
HGNC | ||
Entrez ID | ||
Gene type | lincRNA | |
Synonyms | ||
UniProtAcc |
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Structure and expression level for XXbac-BPG181B23.7 |
Differentially expressed gene analysis between cancer and normal samples. |
Ensembl ID | Base mean | log2FC(AD/control) | lfcSE | Stat | P-value | Adjc.p-value | DEG direction | Cancer type |
ENSG00000272221 | 9.334776e+01 | -1.156616e+00 | 1.412044e-01 | -8.191074e+00 | 2.590000e-16 | 1.370000e-15 | DOWN | LUSC |
ENSG00000272221 | 5.525185e+01 | -1.113286e+00 | 1.475469e-01 | -7.545300e+00 | 4.510000e-14 | 3.740000e-13 | DOWN | COAD |
Correlation between lncRNAs and cancer stages. |
LncRNA Ensembl ID | Correlation | P-value | Cancer Type | Adjc.p-value |
ENSG00000272221 | 3.215526e-01 | 3.124751e-02 | CHOL | 3.260441e-02 |
ENSG00000272221 | -3.463384e-01 | 8.851693e-04 | KICH | 1.237402e-03 |
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lncRNA-Protein interaction for XXbac-BPG181B23.7 |
lncRNA-epigenetic factor interaction (#cancer types with positive correlation >= 5). |
LncRNA Ensembl ID | LncRNA ENST ID | LncRNA Name | Protein Ensembl ID | Protein Name | CatRAPID Score | Lncpro Score | UniPortID | Gene Subtype | Public source |
lncRNA-transcript factor interaction (#cancer types with positive correlation >= 5). |
LncRNA Ensembl ID | LncRNA ENST ID | LncRNA Name | Protein Ensembl ID | Protein Name | CatRAPID Score | Lncpro Score | UniPortID | Gene Subtype | Public source |
ENSG00000272221 | ENST00000606743 | XXbac-BPG181B23.7 | ENSG00000167967 | E4F1 | 66.76 | 91.78 | Q66K89 | TF | NA |
ENSG00000272221 | ENST00000606743 | XXbac-BPG181B23.7 | ENSG00000130254 | SAFB2 | 64.37 | 92.7717 | Q14151 | TF,RBP | NA |
ENSG00000272221 | ENST00000606743 | XXbac-BPG181B23.7 | ENSG00000167766 | ZNF83 | 7.94 | 90.215 | P51522 | TF | NA |
ENSG00000272221 | ENST00000606743 | XXbac-BPG181B23.7 | ENSG00000124766 | SOX4 | 7.4 | 90.4196 | Q06945 | TF | NA |
lncRNA-RNA binding protein interaction (#cancer types with positive correlation >= 5). |
LncRNA Ensembl ID | LncRNA ENST ID | LncRNA Name | Protein Ensembl ID | Protein Name | CatRAPID Score | Lncpro Score | UniPortID | Gene Subtype | Public source |
ENSG00000272221 | ENST00000606743 | XXbac-BPG181B23.7 | ENSG00000130254 | SAFB2 | 64.37 | 92.9557 | Q14151 | TF,RBP | NA |
ENSG00000272221 | ENST00000606743 | XXbac-BPG181B23.7 | ENSG00000004534 | RBM6 | 63.23 | 94.183 | P78332 | RBP | NA |
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