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Center for Computational Systems Medicine
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lncRNA summary

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lncRNA structure and expression level

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lncRNA-Protein interaction

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lncRNA-DNA interaction

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lncRNA-RNA interaction

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Variants in lncRNA

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lncRNAs regulate the target genes through functioning as enhancers

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lncRNAs regulate the target genes through recruiting transcript factors

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lncRNAs regulate the alternative splicing events through interacting with splicing factor

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lncRNAs regulate mRNA through targeting the 3'-UTR region

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lncRNAs regulate mRNA by competing with miRNA

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lncRNA coding potential

lncRNA: ENSG00000271918

Summary for CTD-2287O16.5

check button Gene summary

Gene informationEnsembl ID

ENSG00000271918

Gene symbol

CTD-2287O16.5

Gene name
HGNC
Entrez ID
Gene typeantisense
Synonyms
UniProtAcc

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Structure and expression level for CTD-2287O16.5

check buttonDifferentially expressed gene analysis between cancer and normal samples.
DEG result
Ensembl IDBase meanlog2FC(AD/control)lfcSEStatP-valueAdjc.p-valueDEG direction Cancer type
ENSG000002719187.543506e+011.260426e+003.261953e-013.864021e+001.115360e-044.821680e-04UPCHOL

check buttonCorrelation between lncRNAs and cancer stages.
LncRNA Ensembl IDCorrelationP-valueCancer TypeAdjc.p-value
ENSG000002719185.921046e-011.832654e-05CHOL9.754823e-05

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lncRNA-Protein interaction for CTD-2287O16.5

lncrna_protein
check buttonlncRNA-epigenetic factor interaction (#cancer types with positive correlation >= 5).
Epi result
LncRNA Ensembl IDLncRNA ENST IDLncRNA NameProtein Ensembl IDProtein NameCatRAPID ScoreLncpro ScoreUniPortIDGene SubtypePublic source
ENSG00000271918ENST00000606662CTD-2287O16.5ENSG00000005302MSL315.7190.118Q8N5Y2EpiNA
ENSG00000271918ENST00000606662CTD-2287O16.5ENSG00000204371EHMT269.0591.9697Q96KQ7EpiNA

check buttonlncRNA-transcript factor interaction (#cancer types with positive correlation >= 5).
TF result
LncRNA Ensembl IDLncRNA ENST IDLncRNA NameProtein Ensembl IDProtein NameCatRAPID ScoreLncpro ScoreUniPortIDGene SubtypePublic source
ENSG00000271918ENST00000606662CTD-2287O16.5ENSG00000102878HSF49.6890.273Q9ULV5TFNA
ENSG00000271918ENST00000606662CTD-2287O16.5ENSG00000160113NR2F67.391.4418P10588TFNA

check buttonlncRNA-RNA binding protein interaction (#cancer types with positive correlation >= 5).
LncRNA Ensembl IDLncRNA ENST IDLncRNA NameProtein Ensembl IDProtein NameCatRAPID ScoreLncpro ScoreUniPortIDGene SubtypePublic source

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lncRNA-DNA interaction for CTD-2287O16.5

lncrna_DNA
check buttonlncRNA targets the enhancer region and positively regulates the gene expression.

check buttonlncRNA targets the promoter region and positively regulates the gene expression.

check buttonlncRNA targets the promoter region and negatively regulates the gene expression.

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lncRNA-RNA interaction for CTD-2287O16.5

lncrna_RNA
check buttonlncRNA targets the 3'UTR region and negatively regulates the mRNA.
Only predicted by lncTar
CNOT1,ATP2A2,SEC23B,RAB11FIP1,DLST,PLS1,PNPO,EIF4G2,HSPA8,M6PR,MYH9,CS,ATP6V1B2,CALU,YWHAZ,TPM3,STAT3,RNF19B,SF3A1,PLEKHB2,EIF4G1,TUBA1C,STK24,NUP98,ABHD5,CDV3,PSMD1,DNAJC11,SLC39A14,CAP1,EMC1,ALAS1
Exist in public source
NA

check buttonlncRNA targets the skipped exon region.
-lncRNA and exonskipping events are positively correlated.
LncRNA Ensembl IDLncRNA ENST IDExon IDSkipped ExondGndGGene name with skipped exonTransID with skipped exonORF mutation

-lncRNA and exonskipping events are negatively correlated.
lncRNA and exonskipping events negative correlated
LncRNA Ensembl IDLncRNA ENST IDExon IDSkipped ExondGndGGene name with skipped exonTransID with skipped exonLOF
ENSG00000271918ENST00000606662exon_skip_66482chr11:126274926-126275021-17.16-0.2043FOXRED1ENST00000263578Frame-shift
ENSG00000271918ENST00000606662exon_skip_111863chr14:23565815-23565892-18.94-0.2668AP1G2ENST00000308724,ENST00000397120Frame-shift
ENSG00000271918ENST00000606662exon_skip_114365chr14:74290026-74290118-14.73-0.1991ABCD4ENST00000356924Frame-shift
ENSG00000271918ENST00000606662exon_skip_377198chr3:123130479-123130616-19.98-0.1469PDIA5ENST00000316218Frame-shift
ENSG00000271918ENST00000606662exon_skip_382458chr3:38131595-38131638-11.26-0.3128ACAA1ENST00000333167Frame-shift
ENSG00000271918ENST00000606662exon_skip_431827chr4:109696409-109696486-7.19-0.1498CASP6ENST00000265164Frame-shift
ENSG00000271918ENST00000606662exon_skip_470226chr7:103307595-103307708-18.26-0.1645PMPCBENST00000249269Frame-shift
ENSG00000271918ENST00000606662exon_skip_16568chr1:201989382-201989531-16.26-0.1642RNPEPENST00000295640Frame-shift
ENSG00000271918ENST00000606662exon_skip_38175chr1:234398381-234398553-17.17-0.1101TARBP1ENST00000040877Frame-shift
ENSG00000271918ENST00000606662exon_skip_41813chr10:68337857-68337996-18.53-0.1799HNRNPH3ENST00000265866Frame-shift
ENSG00000271918ENST00000606662exon_skip_41841chr10:68756272-68756483-22.81-0.1213CCAR1ENST00000265872Frame-shift
ENSG00000271918ENST00000606662exon_skip_74009chr11:64773429-64773505-14.28-0.2596SF1ENST00000377390Frame-shift
ENSG00000271918ENST00000606662exon_skip_87733chr12:120571190-120571291-13.77-0.1700RNF10ENST00000325954Frame-shift
ENSG00000271918ENST00000606662exon_skip_108095chr14:73955450-73955509-14.32-0.2983COQ6ENST00000334571Frame-shift
ENSG00000271918ENST00000606662exon_skip_111870chr14:23566561-23566686-14.73-0.1444AP1G2ENST00000397120Frame-shift
ENSG00000271918ENST00000606662exon_skip_152672chr17:42540949-42541206-24.62-0.1114NAGLUENST00000225927Frame-shift
ENSG00000271918ENST00000606662exon_skip_287763chr17:28884224-28884315-19.56-0.6745FLOT2ENST00000394908Frame-shift
ENSG00000271918ENST00000606662exon_skip_296625chr18:42057882-42058051-19.59-0.1324PIK3C3ENST00000262039Frame-shift
ENSG00000271918ENST00000606662exon_skip_319223chr19:43526200-43526349-23.60-0.1983ETHE1ENST00000292147Frame-shift
ENSG00000271918ENST00000606662exon_skip_324294chr2:27774423-27774530-15.41-0.2568MRPL33ENST00000296102Frame-shift
ENSG00000271918ENST00000606662exon_skip_326885chr2:74490024-74490127-20.73-0.2528TTC31ENST00000233623Frame-shift
ENSG00000271918ENST00000606662exon_skip_335558chr2:240596680-240596942-36.09-0.1549CAPN10ENST00000391984Frame-shift
ENSG00000271918ENST00000606662exon_skip_361485chr21:29008239-29008307-12.13-0.1784RWDD2BENST00000493196Frame-shift
ENSG00000271918ENST00000606662exon_skip_370518chr22:50247691-50247776-15.93-0.3006HDAC10ENST00000216271Frame-shift
ENSG00000271918ENST00000606662exon_skip_390377chr3:183092408-183092545-14.94-0.1288MCCC1ENST00000265594Frame-shift
ENSG00000271918ENST00000606662exon_skip_436035chr5:79656957-79657001-11.60-0.4296TENT2ENST00000296783,ENST00000428308,ENST00000453514Frame-shift
ENSG00000271918ENST00000606662exon_skip_442657chr5:74730259-74730398-16.86-0.1417GFM2ENST00000296805,ENST00000509430Frame-shift
ENSG00000271918ENST00000606662exon_skip_511212chrX:71555189-71555385-21.94-0.1291OGTENST00000373719Frame-shift
ENSG00000271918ENST00000606662exon_skip_494079chr8:144099080-144099205-28.60-0.2750SHARPINENST00000398712Frame-shift

check buttonlncRNA targets by miRNA.
lncRNA targets by miRNA
LncRNA Ensembl IDmiRNA IDLncRNA ENST IDBinding site in lncRNAScoreEnergyAlign LenPublic source
ENSG00000271918hsa-mir-22ENST00000606662chr5:116084037-116084128188.00-96.7987NA
ENSG00000271918hsa-mir-22ENST00000606662chr5:116085146-116085229162.00-78.0789NA
ENSG00000271918hsa-mir-22ENST00000606662chr5:116084796-116084885161.00-65.8181NA
ENSG00000271918hsa-mir-22ENST00000606662chr5:116083911-116083997160.00-81.4583NA
ENSG00000271918hsa-mir-22ENST00000606662chr5:116084885-116084960157.00-73.3880NA
ENSG00000271918hsa-mir-22ENST00000606662chr5:116084954-116085048154.00-75.1895NA
ENSG00000271918hsa-mir-22ENST00000606662chr5:116084201-116084289152.00-96.5568NA
ENSG00000271918hsa-mir-22ENST00000606662chr5:116084660-116084754151.00-76.4187NA
ENSG00000271918hsa-mir-22ENST00000606662chr5:116083812-116083900142.00-67.2888NA
ENSG00000271918hsa-mir-22ENST00000606662chr5:116084449-116084533141.00-72.1286NA
ENSG00000271918hsa-mir-22ENST00000606662chr5:116085286-116085374141.00-65.7883NA

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Variants for CTD-2287O16.5

check buttonRNA A-to-I editing events in lncRNA.
LncRNAediting IDLncRNA Ensembl IDChromosomeEditing PositionStrandGene TypeGene NameTranscript IDTranscript TypeTranscript Name

check buttonEdited-associated DElncRNAs in cancer.
LncRNA Ensembl IDLncRNA IndexCancer TypeChr_Postion_StrandAVE1AVE2log2FCW-valueP-valueAdjc.p-valueChange

check buttonCorrelation between RNA A-to-I editing events's frequecy and lncRNA expression.
LncRNA Ensembl IDLncRNA IndexCorrelationP-valueAdjc.p-value

check buttonCis-expression quantitative trait loci(cis-eQTL) of lncRNA.
LncRNA Ensembl IDLncRNA NameSNP infoNumber of Positive corelated CancerPositive corelated CancerNumber of Negative corelated CancerNegative corelated Cancer

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lncRNAs regulate the target genes through functioning as enhancers

lncrna_enhancer
check buttonlncRNA regulates differentially expressed genes by function as enhancer.
LncRNA Ensembl IDPC Gene IDPC Gene NamePositive correlated cancersCancer with PC gene up-regulationCancer with PC gene down-regulation

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lncRNAs regulate the target genes through recruiting transcript factors

lncrna_TF
check buttonLncRNA-TF complex positively regulates the gene expression by target promoter region (#cancer types with positive correlation >= 5).
lncRNA IDTF IDTF NamePCgene IDPCgene NameNumber of CancerCanaer Types

check buttonLncRNA-TF complex negatively regulates the gene expression by target promoter region (#cancer types with negative correlation >= 5).
lncRNA IDTF IDTF NamePCgene IDPCgene NameNumber of CancerCanaer Types

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lncRNAs regulate the alternative splicing event through interacting with splicing factor

lncrna_AS
check buttonLncRNA-RBP complex positively regulates the exon skippping events by target skipped eoxon region.
LncRNA Ensembl IDRBP IDRBP Gene NameExon Skipping IDSkipped ExonEX Gene NameEX Affected TransIDORF_annoCancer Type

check buttonLncRNA-RBP complex negatively regulates the exon skippping events by target skipped eoxon region.
LncRNA Ensembl IDRBP IDRBP Gene NameExon Skipping IDSkipped ExonEX Gene NameEX Affected TransIDORF_annoCancer Type

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lncRNAs regulate mRNA through targeting the 3'-UTR region

lncrna_mRNA
check buttonlncRNA regulates differential expressed mRNA by directly targeting 3' UTR region.
LncRNA Ensembl IDLncRNA ENST IDPC Gene NamePC Gene IDPC ENST IDdGnDGCancer with PC gene up-regulationCancer with PC gene Down-regulation
ENSG00000271918ENST00000606662ABHD5ENSG00000011198ENST00000413300-0.1993204-CHOL
ENSG00000271918ENST00000606662ALAS1ENSG00000023330ENST00000394965-0.10461317-CHOL
ENSG00000271918ENST00000606662ALAS1ENSG00000023330ENST00000310271-0.10461317-CHOL
ENSG00000271918ENST00000606662ALAS1ENSG00000023330ENST00000493402-0.19581317-CHOL
ENSG00000271918ENST00000606662SLC39A14ENSG00000104635ENST00000240095-0.10121293-CHOL
ENSG00000271918ENST00000606662PNPOENSG00000108439ENST00000584061-0.116053-CHOL
ENSG00000271918ENST00000606662PNPOENSG00000108439ENST00000585320-0.1077171-CHOL

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lncRNAs regulate mRNA by competing with miRNA

lncrna_miRNA
check buttonlncRNA regulates mRNA by competing the miRNA binding site with mRNA.
LncRNA Ensembl IDlncRNA-miRNA-mRNACancer Types
ENSG00000271918CTD-2287O16.5,hsa-mir-22,WDR33KICH,CHOL,LGG,SARC,KIRP
ENSG00000271918CTD-2287O16.5,hsa-mir-22,ZHX2KICH,CHOL,LGG,SARC,KIRP
ENSG00000271918CTD-2287O16.5,hsa-mir-22,RXRBKICH,CHOL,LGG,SARC,KIRP
ENSG00000271918CTD-2287O16.5,hsa-mir-22,CRMP1KICH,CHOL,LGG,SARC,KIRP
ENSG00000271918CTD-2287O16.5,hsa-mir-22,C1orf35KICH,CHOL,LGG,PAAD,SARC,KIRP
ENSG00000271918CTD-2287O16.5,hsa-mir-22,PHF2KICH,CHOL,LGG,SARC,KIRP
ENSG00000271918CTD-2287O16.5,hsa-mir-22,DDX42KICH,CHOL,LGG,SARC,KIRP
ENSG00000271918CTD-2287O16.5,hsa-mir-22,KAT7KICH,CHOL,LGG,SARC,KIRP
ENSG00000271918CTD-2287O16.5,hsa-mir-22,COILKICH,CHOL,LGG,SARC,KIRP
ENSG00000271918CTD-2287O16.5,hsa-mir-22,TRMT10BKICH,CHOL,LGG,SARC,KIRP
ENSG00000271918CTD-2287O16.5,hsa-mir-22,RBM6KICH,CHOL,LGG,SARC,KIRP
ENSG00000271918CTD-2287O16.5,hsa-mir-22,USP21KICH,CHOL,LGG,SARC,KIRP
ENSG00000271918CTD-2287O16.5,hsa-mir-22,YTHDC1KICH,CHOL,LGG,SARC,KIRP
ENSG00000271918CTD-2287O16.5,hsa-mir-22,LCMT2KICH,CHOL,LGG,SARC,KIRP
ENSG00000271918CTD-2287O16.5,hsa-mir-22,CBX1KICH,CHOL,LGG,SARC,KIRP
ENSG00000271918CTD-2287O16.5,hsa-mir-22,FUZKICH,CHOL,PAAD,SARC,KIRP
ENSG00000271918CTD-2287O16.5,hsa-mir-22,PRR14KICH,CHOL,LGG,PAAD,SARC,KIRP
ENSG00000271918CTD-2287O16.5,hsa-mir-22,C2orf68KICH,CHOL,LGG,SARC,KIRP
ENSG00000271918CTD-2287O16.5,hsa-mir-22,PM20D2KICH,CHOL,LGG,SARC,KIRP
ENSG00000271918CTD-2287O16.5,hsa-mir-22,RPRD2KICH,CHOL,LGG,SARC,KIRP
ENSG00000271918CTD-2287O16.5,hsa-mir-22,INO80DKICH,CHOL,LGG,SARC,KIRP
ENSG00000271918CTD-2287O16.5,hsa-mir-22,RING1KICH,CHOL,LGG,SARC,KIRP
ENSG00000271918CTD-2287O16.5,hsa-mir-22,KANSL1KICH,CHOL,LGG,SARC,KIRP
ENSG00000271918CTD-2287O16.5,hsa-mir-22,ZNF7KICH,CHOL,LGG,SARC,KIRP
ENSG00000271918CTD-2287O16.5,hsa-mir-22,ILKAPKICH,CHOL,LGG,PAAD,KIRP
ENSG00000271918CTD-2287O16.5,hsa-mir-22,NAA16KICH,CHOL,LGG,SARC,KIRP
ENSG00000271918CTD-2287O16.5,hsa-mir-22,RETREG3KICH,CHOL,LGG,PAAD,KIRP
ENSG00000271918CTD-2287O16.5,hsa-mir-22,KIAA0895LCHOL,LGG,PAAD,SARC,KIRP
ENSG00000271918CTD-2287O16.5,hsa-mir-22,FAM117BKICH,CHOL,LGG,SARC,KIRP
ENSG00000271918CTD-2287O16.5,hsa-mir-22,SENP7KICH,CHOL,LGG,SARC,KIRP
ENSG00000271918CTD-2287O16.5,hsa-mir-22,PAM16CHOL,LGG,PAAD,SARC,KIRP
ENSG00000271918CTD-2287O16.5,hsa-mir-22,BOLA1KICH,CHOL,LGG,PAAD,SARC,KIRP
ENSG00000271918CTD-2287O16.5,hsa-mir-22,PARP2KICH,CHOL,LGG,SARC,KIRP
ENSG00000271918CTD-2287O16.5,hsa-mir-22,KAT2AKICH,CHOL,LGG,PAAD,SARC,KIRP
ENSG00000271918CTD-2287O16.5,hsa-mir-22,NCAPH2CHOL,LGG,PAAD,SARC,KIRP
ENSG00000271918CTD-2287O16.5,hsa-mir-22,TSEN2KICH,CHOL,LGG,SARC,KIRP
ENSG00000271918CTD-2287O16.5,hsa-mir-22,ERCC3KICH,CHOL,LGG,SARC,KIRP
ENSG00000271918CTD-2287O16.5,hsa-mir-22,PHC1KICH,CHOL,LGG,SARC,KIRP
ENSG00000271918CTD-2287O16.5,hsa-mir-22,EXD3KICH,CHOL,LGG,PAAD,SARC,KIRP
ENSG00000271918CTD-2287O16.5,hsa-mir-22,RBM4BKICH,CHOL,LGG,SARC,KIRP
ENSG00000271918CTD-2287O16.5,hsa-mir-22,PPOXKICH,CHOL,PAAD,SARC,KIRP
ENSG00000271918CTD-2287O16.5,hsa-mir-22,COA5KICH,CHOL,LGG,SARC,KIRP
ENSG00000271918CTD-2287O16.5,hsa-mir-22,RAD52KICH,CHOL,LGG,SARC,KIRP
ENSG00000271918CTD-2287O16.5,hsa-mir-22,PCF11KICH,CHOL,LGG,SARC,KIRP
ENSG00000271918CTD-2287O16.5,hsa-mir-22,NEIL1KICH,CHOL,PAAD,SARC,KIRP
ENSG00000271918CTD-2287O16.5,hsa-mir-22,HEXIM2KICH,CHOL,LGG,PAAD,SARC,KIRP
ENSG00000271918CTD-2287O16.5,hsa-mir-22,VEZF1KICH,CHOL,LGG,SARC,KIRP
ENSG00000271918CTD-2287O16.5,hsa-mir-22,NAB1KICH,CHOL,LGG,SARC,KIRP
ENSG00000271918CTD-2287O16.5,hsa-mir-22,PAXBP1KICH,CHOL,LGG,SARC,KIRP
ENSG00000271918CTD-2287O16.5,hsa-mir-22,LUC7L3KICH,CHOL,LGG,SARC,KIRP
ENSG00000271918CTD-2287O16.5,hsa-mir-22,PAGR1KICH,CHOL,LGG,PAAD,SARC,KIRP
ENSG00000271918CTD-2287O16.5,hsa-mir-22,ING5KICH,CHOL,LGG,PAAD,SARC,KIRP
ENSG00000271918CTD-2287O16.5,hsa-mir-22,CLK2KICH,CHOL,LGG,SARC,KIRP
ENSG00000271918CTD-2287O16.5,hsa-mir-22,LUC7L2KICH,CHOL,LGG,SARC,KIRP
ENSG00000271918CTD-2287O16.5,hsa-mir-22,SENP6KICH,CHOL,LGG,SARC,KIRP
ENSG00000271918CTD-2287O16.5,hsa-mir-22,E4F1CHOL,LGG,PAAD,SARC,KIRP
ENSG00000271918CTD-2287O16.5,hsa-mir-22,GOLGA8BCHOL,LGG,PAAD,SARC,KIRP
ENSG00000271918CTD-2287O16.5,hsa-mir-22,KHDC4KICH,CHOL,LGG,SARC,KIRP
ENSG00000271918CTD-2287O16.5,hsa-mir-22,CEP95KICH,CHOL,LGG,SARC,KIRP
ENSG00000271918CTD-2287O16.5,hsa-mir-22,HEXDKICH,CHOL,LGG,PAAD,KIRP
ENSG00000271918CTD-2287O16.5,hsa-mir-22,MRPL53KICH,CHOL,LGG,PAAD,KIRP
ENSG00000271918CTD-2287O16.5,hsa-mir-22,EIF4ENIF1KICH,CHOL,LGG,SARC,KIRP
ENSG00000271918CTD-2287O16.5,hsa-mir-22,TIA1KICH,CHOL,LGG,SARC,KIRP
ENSG00000271918CTD-2287O16.5,hsa-mir-22,DPF2KICH,CHOL,LGG,SARC,KIRP
ENSG00000271918CTD-2287O16.5,hsa-mir-22,RSBN1LKICH,CHOL,LGG,SARC,KIRP
ENSG00000271918CTD-2287O16.5,hsa-mir-22,PLA2G6CHOL,LGG,PAAD,SARC,KIRP
ENSG00000271918CTD-2287O16.5,hsa-mir-22,MSL1KICH,CHOL,LGG,SARC,KIRP
ENSG00000271918CTD-2287O16.5,hsa-mir-22,RC3H1KICH,CHOL,LGG,SARC,KIRP
ENSG00000271918CTD-2287O16.5,hsa-mir-22,RBBP6KICH,CHOL,LGG,SARC,KIRP
ENSG00000271918CTD-2287O16.5,hsa-mir-22,EDRF1KICH,CHOL,LGG,SARC,KIRP
ENSG00000271918CTD-2287O16.5,hsa-mir-22,CTPS2KICH,CHOL,LGG,SARC,KIRP
ENSG00000271918CTD-2287O16.5,hsa-mir-22,SBK1KICH,CHOL,LGG,SARC,KIRP
ENSG00000271918CTD-2287O16.5,hsa-mir-22,TAF7KICH,CHOL,LGG,SARC,KIRP
ENSG00000271918CTD-2287O16.5,hsa-mir-22,TSEN54KICH,CHOL,LGG,PAAD,KIRP
ENSG00000271918CTD-2287O16.5,hsa-mir-22,POLG2KICH,CHOL,LGG,SARC,KIRP
ENSG00000271918CTD-2287O16.5,hsa-mir-22,HOOK2CHOL,LGG,PAAD,SARC,KIRP
ENSG00000271918CTD-2287O16.5,hsa-mir-22,MLLT6KICH,CHOL,LGG,SARC,KIRP
ENSG00000271918CTD-2287O16.5,hsa-mir-22,NXF1KICH,CHOL,LGG,SARC,KIRP
ENSG00000271918CTD-2287O16.5,hsa-mir-22,NVLKICH,CHOL,LGG,SARC,KIRP
ENSG00000271918CTD-2287O16.5,hsa-mir-22,MYEF2KICH,CHOL,LGG,SARC,KIRP
ENSG00000271918CTD-2287O16.5,hsa-mir-22,OBSL1KICH,LGG,PAAD,SARC,KIRP
ENSG00000271918CTD-2287O16.5,hsa-mir-22,MRPL38KICH,CHOL,LGG,PAAD,SARC,KIRP
ENSG00000271918CTD-2287O16.5,hsa-mir-22,RBMXKICH,CHOL,LGG,SARC,KIRP
ENSG00000271918CTD-2287O16.5,hsa-mir-22,PMS1KICH,CHOL,LGG,SARC,KIRP
ENSG00000271918CTD-2287O16.5,hsa-mir-22,UBE2G2KICH,CHOL,LGG,SARC,KIRP
ENSG00000271918CTD-2287O16.5,hsa-mir-22,FBXO46KICH,CHOL,LGG,PAAD,SARC,KIRP
ENSG00000271918CTD-2287O16.5,hsa-mir-22,PHF12KICH,CHOL,LGG,SARC,KIRP
ENSG00000271918CTD-2287O16.5,hsa-mir-22,MSL2KICH,CHOL,LGG,SARC,KIRP
ENSG00000271918CTD-2287O16.5,hsa-mir-22,RBM45KICH,CHOL,LGG,SARC,KIRP
ENSG00000271918CTD-2287O16.5,hsa-mir-22,RBM5KICH,CHOL,LGG,SARC,KIRP
ENSG00000271918CTD-2287O16.5,hsa-mir-22,CCDC57KICH,CHOL,PAAD,SARC,KIRP
ENSG00000271918CTD-2287O16.5,hsa-mir-22,SNRPAKICH,CHOL,LGG,PAAD,KIRP
ENSG00000271918CTD-2287O16.5,hsa-mir-22,CXXC1KICH,CHOL,LGG,SARC,KIRP
ENSG00000271918CTD-2287O16.5,hsa-mir-22,COPS7BKICH,CHOL,LGG,SARC,KIRP
ENSG00000271918CTD-2287O16.5,hsa-mir-22,RCOR3KICH,CHOL,LGG,SARC,KIRP
ENSG00000271918CTD-2287O16.5,hsa-mir-22,ANGEL2KICH,CHOL,LGG,SARC,KIRP
ENSG00000271918CTD-2287O16.5,hsa-mir-22,SUGP1KICH,CHOL,LGG,PAAD,KIRP
ENSG00000271918CTD-2287O16.5,hsa-mir-22,C14orf93KICH,CHOL,LGG,SARC,KIRP
ENSG00000271918CTD-2287O16.5,hsa-mir-22,CDK5RAP3KICH,CHOL,LGG,PAAD,KIRP
ENSG00000271918CTD-2287O16.5,hsa-mir-22,RBM14KICH,CHOL,LGG,SARC,KIRP
ENSG00000271918CTD-2287O16.5,hsa-mir-22,HINFPKICH,CHOL,LGG,SARC,KIRP
ENSG00000271918CTD-2287O16.5,hsa-mir-22,UIMC1KICH,CHOL,LGG,SARC,KIRP
ENSG00000271918CTD-2287O16.5,hsa-mir-22,MKS1KICH,CHOL,LGG,SARC,KIRP
ENSG00000271918CTD-2287O16.5,hsa-mir-22,PCIF1KICH,CHOL,LGG,SARC,KIRP
ENSG00000271918CTD-2287O16.5,hsa-mir-22,SF3B1KICH,CHOL,LGG,SARC,KIRP
ENSG00000271918CTD-2287O16.5,hsa-mir-22,FNBP4KICH,CHOL,LGG,SARC,KIRP
ENSG00000271918CTD-2287O16.5,hsa-mir-22,SRSF1KICH,CHOL,LGG,SARC,KIRP
ENSG00000271918CTD-2287O16.5,hsa-mir-22,DGCR8KICH,CHOL,LGG,SARC,KIRP
ENSG00000271918CTD-2287O16.5,hsa-mir-22,DET1KICH,CHOL,LGG,SARC,KIRP
ENSG00000271918CTD-2287O16.5,hsa-mir-22,ENDOVKICH,CHOL,LGG,PAAD,KIRP
ENSG00000271918CTD-2287O16.5,hsa-mir-22,POGZKICH,CHOL,LGG,SARC,KIRP
ENSG00000271918CTD-2287O16.5,hsa-mir-22,BRD8KICH,CHOL,LGG,SARC,KIRP
ENSG00000271918CTD-2287O16.5,hsa-mir-22,TBPKICH,CHOL,LGG,SARC,KIRP
ENSG00000271918CTD-2287O16.5,hsa-mir-22,WDR83KICH,CHOL,LGG,PAAD,KIRP
ENSG00000271918CTD-2287O16.5,hsa-mir-22,RYKKICH,CHOL,LGG,SARC,KIRP
ENSG00000271918CTD-2287O16.5,hsa-mir-22,AARSD1CHOL,LGG,PAAD,SARC,KIRP
ENSG00000271918CTD-2287O16.5,hsa-mir-22,CTDSPL2KICH,CHOL,LGG,SARC,KIRP
ENSG00000271918CTD-2287O16.5,hsa-mir-22,BUD13KICH,CHOL,LGG,SARC,KIRP
ENSG00000271918CTD-2287O16.5,hsa-mir-22,LYSMD1KICH,CHOL,LGG,SARC,KIRP
ENSG00000271918CTD-2287O16.5,hsa-mir-22,RRNAD1KICH,CHOL,LGG,PAAD,KIRP
ENSG00000271918CTD-2287O16.5,hsa-mir-22,SRRTKICH,CHOL,PAAD,SARC,KIRP
ENSG00000271918CTD-2287O16.5,hsa-mir-22,PMF1KICH,CHOL,LGG,PAAD,KIRP
ENSG00000271918CTD-2287O16.5,hsa-mir-22,DCAF8KICH,CHOL,LGG,SARC,KIRP
ENSG00000271918CTD-2287O16.5,hsa-mir-22,NSMCE4AKICH,CHOL,LGG,SARC,KIRP
ENSG00000271918CTD-2287O16.5,hsa-mir-22,PLXNB1KICH,CHOL,PAAD,SARC,KIRP
ENSG00000271918CTD-2287O16.5,hsa-mir-22,CASC3KICH,CHOL,LGG,SARC,KIRP
ENSG00000271918CTD-2287O16.5,hsa-mir-22,N4BP2L2KICH,CHOL,LGG,SARC,KIRP
ENSG00000271918CTD-2287O16.5,hsa-mir-22,LRRC14CHOL,LGG,PAAD,SARC,KIRP
ENSG00000271918CTD-2287O16.5,hsa-mir-22,PRPF39KICH,CHOL,LGG,SARC,KIRP
ENSG00000271918CTD-2287O16.5,hsa-mir-22,WBP1KICH,CHOL,LGG,PAAD,SARC,KIRP
ENSG00000271918CTD-2287O16.5,hsa-mir-22,NFRKBKICH,CHOL,LGG,SARC,KIRP
ENSG00000271918CTD-2287O16.5,hsa-mir-22,ZBTB5KICH,CHOL,LGG,SARC,KIRP
ENSG00000271918CTD-2287O16.5,hsa-mir-22,WDR90KICH,CHOL,PAAD,SARC,KIRP
ENSG00000271918CTD-2287O16.5,hsa-mir-22,SMAD4KICH,CHOL,LGG,SARC,KIRP
ENSG00000271918CTD-2287O16.5,hsa-mir-22,INO80ECHOL,LGG,PAAD,SARC,KIRP
ENSG00000271918CTD-2287O16.5,hsa-mir-22,KATNBL1KICH,CHOL,LGG,SARC,KIRP

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lncRNA coding potential

check buttonORFfinder result for the gencode.v22.lncRNA.transcript.fa.
lncRNA Ensembl IDlncRNA ENST IDlength(AA)start at transcriptend at transcript
ENSG00000271918.1ENST00000606662.184119373