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Center for Computational Systems Medicine
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lncRNA summary

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lncRNA structure and expression level

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lncRNA-Protein interaction

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lncRNA-DNA interaction

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lncRNA-RNA interaction

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Variants in lncRNA

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lncRNAs regulate the target genes through functioning as enhancers

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lncRNAs regulate the target genes through recruiting transcript factors

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lncRNAs regulate the alternative splicing events through interacting with splicing factor

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lncRNAs regulate mRNA through targeting the 3'-UTR region

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lncRNAs regulate mRNA by competing with miRNA

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lncRNA coding potential

lncRNA: ENSG00000269867

Summary for CTD-2583A14.8

check button Gene summary

Gene informationEnsembl ID

ENSG00000269867

Gene symbol

CTD-2583A14.8

Gene name
HGNC
Entrez ID
Gene typesense_intronic
Synonyms
UniProtAcc

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Structure and expression level for CTD-2583A14.8

check buttonAS events and RNA A-to-I editing events of lncRNA in TCGA based on Genvode V22 structure.
UCSC result

check buttonDifferentially expressed gene analysis between cancer and normal samples.
DEG result
Ensembl IDBase meanlog2FC(AD/control)lfcSEStatP-valueAdjc.p-valueDEG direction Cancer type
ENSG000002698671.229395e+021.028112e+001.033197e-019.950777e+002.500000e-231.800000e-22UPKIRC
ENSG000002698671.610871e+021.265526e+001.468268e-018.619175e+006.740000e-189.020000e-17UPKICH
ENSG000002698671.970524e+021.103016e+001.881836e-015.861385e+004.590000e-096.900000e-08UPBLCA
ENSG000002698674.024253e+021.282886e+001.014986e-011.263944e+011.280000e-361.690000e-35UPBRCA

check buttonCorrelation between lncRNAs and cancer stages.
LncRNA Ensembl IDCorrelationP-valueCancer TypeAdjc.p-value
ENSG000002698675.863688e-012.309610e-05CHOL1.122764e-04
ENSG000002698674.053983e-018.111809e-05KICH1.391089e-04
ENSG000002698673.212349e-014.711274e-11LIHC1.954846e-10
ENSG000002698673.600038e-012.648290e-18PRAD4.407832e-17

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lncRNA-Protein interaction for CTD-2583A14.8

lncrna_protein
check buttonlncRNA-epigenetic factor interaction (#cancer types with positive correlation >= 5).
LncRNA Ensembl IDLncRNA ENST IDLncRNA NameProtein Ensembl IDProtein NameCatRAPID ScoreLncpro ScoreUniPortIDGene SubtypePublic source

check buttonlncRNA-transcript factor interaction (#cancer types with positive correlation >= 5).
TF result
LncRNA Ensembl IDLncRNA ENST IDLncRNA NameProtein Ensembl IDProtein NameCatRAPID ScoreLncpro ScoreUniPortIDGene SubtypePublic source
ENSG00000269867ENST00000597780CTD-2583A14.8ENSG00000104885DOT1L69.0991.1711Q8TEK3TF,EpiNA
ENSG00000269867ENST00000597780CTD-2583A14.8ENSG00000167232ZNF9162.5190.5891Q05481TFNA
ENSG00000269867ENST00000597780CTD-2583A14.8ENSG00000236287ZBED554.990.5104Q49AG3TFNA
ENSG00000269867ENST00000597780CTD-2583A14.8ENSG00000256223ZNF107.2591.1069P21506TFNA

check buttonlncRNA-RNA binding protein interaction (#cancer types with positive correlation >= 5).
RBP result
LncRNA Ensembl IDLncRNA ENST IDLncRNA NameProtein Ensembl IDProtein NameCatRAPID ScoreLncpro ScoreUniPortIDGene SubtypePublic source
ENSG00000269867ENST00000597780CTD-2583A14.8ENSG00000013573DDX1192.2990.5142Q96FC9RBPNA
ENSG00000269867ENST00000597780CTD-2583A14.8ENSG00000091009RBM2773.8291.2808Q9P2N5RBPNA
ENSG00000269867ENST00000597780CTD-2583A14.8ENSG00000083544TDRD331.2190.8882Q9H7E2RBP,EpiNA

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lncRNA-DNA interaction for CTD-2583A14.8

lncrna_DNA
check buttonlncRNA targets the enhancer region and positively regulates the gene expression.
Only predicted by TDF
RPAP2,CCDC65,PMM2,GSDMB,B3GNTL1,VAMP1,EPOR,MFSD8,TMEM234,NBPF9,BRD1,FASTKD3,CIRBP,PET100,MZF1,TTC31,CNOT9,QPCTL,LYSMD4,SRP19,SUGP2,PPP2R3B,FKRP,DCLRE1C,MKNK1,L3HYPDH,DMTF1,RNF34,ZDHHC23,NUP62,FAM193A,UNKL,OPA3,CXXC5,PIGG,LMBR1L,ZNF24,NUP50,WDCP,ULK3,SERTAD3,KMT2B,IRAK4,STAT2,METTL5,ENY2,VMP1,ZFP14,CENATAC,NPEPL1,WDR5B,TP53INP1,SAFB2,KCTD13,MSANTD2,CCDC14,FAM200A,OSER1,ACAD8,CLK4,C6orf136,POLR2K,MAEA,ZUP1,FAM133B,ZBED5,EIF2B5,PPIH,RABGGTB,UBA2,RECQL4,TTC14,KNTC1,CEP72,PAF1,SLC2A11,HMGXB3,SUDS3,GKAP1,SPRN,SPG7,MIDN,PTPRH,ATR,SIAH1,PPP1R13L,USP49,DNAJC2,PPIP5K1,OGT,RCCD1,IGIP,CBX3,RAB4B,PDE7A,COX19,CLK2,MYEF2,BRSK1,TARBP2,RAPGEF6,MPLKIP,POLG2,DHX34,RBM15,CHKB,CEP152,CEP89,METTL17,UBE3A,ANAPC10,RPAP3,ESRP1,BBC3,CBY1,MORC2,SLC12A9,WDR83,OSGEP,THOC2,CLK1,ZBTB6,ATXN7,MRRF,WDR5,ITGB3BP,GABPB1,RABL2A,NASP,LLGL2,ANKRD39,PRC1,OFD1,MOV10,CARS2,ACYP1,CCDC9B,TOMM40,MTFMT,SLC25A29,TMEM39A,FCHSD1,TMEM243,IQGAP3,HELLS,TIAM2,CFAP298,GAR1,XPNPEP3,B3GALT6,SKP2,RSRC2,TTF1,C19orf48,PFDN6,HSH2D,FANCF,NAPB,C3orf62,NAA25,RDH14,LPCAT4,UTP23,ZFP82,SETD5,ZFP62,ALKBH2,ANAPC5,ZBED8,ORMDL1,ZNF45,BRAF,RALGAPA2,LPAR2,COQ7,C18orf21,COQ6,BAZ1A,C12orf73,DDX51,DONSON,AGER,BRIX1,MBD4,AGO3,C19orf12,SPOUT1,GUF1,SBNO1,SRSF2,C1orf52,PHC3,CUL9,CDK11A,TFCP2,MRPL32,PASK,TSEN54,LRRC37B,DHX35,ATG4B,SKIL,UBE2O,LMNTD2,TAOK3,DCUN1D2,NXF1,DAGLB,EIF2B1,FIGNL1,NR2C2,PAN2,TEAD2,BORCS8,BMF,FAM229A,SLFN13,SAE1,GIGYF1,ZNF14,NOP2,FAM193B,CENPH,LSM11,ABCA7,TMCO6,NOL3,XPO1,COG7,SEC31B,ZFC3H1,PDRG1,KLHL17,NFYB,ARHGAP33,MBTD1,DMAC2L,DNASE1,TMEM184A,HEXD,TNPO2,HDAC8,VCPKMT,TMEM50B,TTC3,CEP192,SCNN1D,EIF4A1,CCDC24,CSNK2A2,MRPS25,CDK7,CCDC12,BFAR,VPS13A,POLM,PALB2,DECR2,SHROOM1,TRIM27,CCDC34,INSR,ATF7IP,TMEM248,CCDC154,ERCC5,MARCHF6,RNF214,RSL24D1,IQCC,ZNF30,TMEM168,SCNM1,ATM,FLVCR1,TEDC2,FANCL,ILF3,NUP54,GLI4,TTC17,CAPN12,BRAP,CDK13,EMG1,DPY19L3,SMG7,LENG8,MED7,RBBP8NL,SH2B1,LCORL,PHKA2,C1orf159,FAM98C,UBE2G2,DNMBP,IP6K2,ARIH2,SPICE1,SH3D21,WDR53,PIF1,PPWD1,RELCH,MLLT6,SASS6,RBM27,ATG12,ZNF70,FASTKD1,INO80D,ICE2,AGK,ASTE1,TRIM65,EIF2B4,TMED4,TIMM44,C20orf96,DDX55,MIX23,HPF1,CASP2,KRIT1,AP1G2,RPL13A,GLMN,FAM111A,BANP,MICA,THOC1,CCDC40,ANKMY1,WDR59,CCDC59,UBA6,AIMP1,NUTF2,PHF12,BEND3,ACBD6,EZH2,TAMM41,MMP15,SLC4A3,GDPD3,DRC3,RC3H1,CBLB,TOP3A,TMEM138,SMG1,ARHGEF38,FAM71E1,LYSMD3,FAAP24,RIMKLB,LTO1,GRPEL2,KANSL2,ZSWIM3,PIDD1,METAP1D,BCLAF3,CWC15,PUS7L,CCDC106,CCDC137,GGCT,LAS1L,CEP83,RFC4,NAA10,UBN2,ANKDD1A,EXD3,DDX6,NFKBID,RTF1,LRIG2,PARP2,ABHD18,PCED1A,ABTB1,NRBP2,MAPK15,SLX4,C11orf98,TBCB,ANGEL1,SMYD4,MTA3,IKBKB,NBPF11,DYNLT2,BRF1,ACIN1,ZNF41,ZC3H8,GNL2,ARHGAP17,TNRC18,PRR7,RAB17,ENOSF1,MAU2,DZIP3,RAB2B,UBOX5,ANKRD49,DNAJC19,KNOP1,SLC38A9,PGBD1,LENG1,MEX3A,FNTA,FNBP4,ZNF28,ZFYVE19,LRRC56,INPP5E,KMT2D,RSRP1,PTRH2,LRR1,NEK8,CHD2,SERF2,NVL,ATG14,GOLGB1,CLEC2D,PWWP2A,ZSWIM1,NBPF15,TRPT1,TATDN2,MYNN,METTL14,KIFC2,TSNARE1,ANKLE2,NSUN2,ZNF720,MED19,HEMK1,MIER3,UPF3B,LINS1,RABEP2,PCSK4,ANKRD26,SCAF11,PYURF,HAUS1,CLHC1,DDX11,PUS10,FRS3,NDUFAF5,GPBP1,C2orf68,FBXL8,MRE11,GNRH1,AP4M1,PSMG2,GK5,ZNRF1,RBM6,FRG1,TOR1AIP2,EHMT1,TRMT13,KRTCAP2,ZNF862,SREK1IP1,ARHGAP12,PRMT1,POP5,ORAI3,TMEM91,PAXIP1,MYL5,VCPIP1,NOM1,EPM2AIP1,TYW1,ABCB6,SYNGAP1,MLLT1,CHD1,PSME3IP1,NAP1L4,MAML1,WDR27,HECTD4,PTCD1,PPCDC,HARS2,KHDC4,CROCC,CERS5,PDCD2L,EP400P1,HPS4,SLC25A19,PNISR,RP9,SFPQ,PLPP5,GEN1,TMEM63A,TRIOBP,FKBP11,CARD8,NCBP2,ATAD2B,DUSP18,ZNF10,LRRC14,KCNC3,TBRG4,LRIF1,DUT,RNF149,PYM1,PLCG1,ALG2,ESCO1,ZBTB8OS,RASSF1,TRMU,TMX3,NAGK,MYPOP,CTBP1,BICRA,NFKBIB,ATXN7L2,PSMA2,SEM1,POC5,IQCE,CHTF18,ADPGK,YTHDF1,AKAP8,CDPF1,CEP250,ARID2,MSTO1,UIMC1,DPY19L2,UBE2J2,C12orf29,RNF44,TAF1D,KATNBL1,MKS1,TAF4,PLEKHH1,C1orf35,CCDC174,TTI1,CDK5RAP1,PIP4P1,SPIN3,NDUFA7,BUD23,TBRG1,PSMG1,SLX4IP,NPRL2,ZCWPW1,RDH13,KLHDC4,EFNA4,MIS18A,CCNL2,TET3,EFCAB7,SMIM22,FBXO46,DMPK,PRR14L,RNPC3,CLK3,C14orf28,ANKRD10,TENT4A,INCA1,UQCRB,LRCH3,UBXN7,NUSAP1,CNOT4,CCDC77,TFAP4,N6AMT1,MSL3,LSM5,SLC66A1,DDTL,BCAT2,TP53I13,SCAF4,MC1R,COQ4,VILL,TDP1,CCNT2,LLPH,KAT2A,PHTF2,NFRKB,ZNF91,CHD6,RAD1,AGO2,SLC17A9,U2AF2,CSTF3,DDI2,XRCC2,PLA2G6,CSNK1E,TMEM86B,RNPS1,NR2F6,ZBTB3,TUBGCP5,RBM25,ENTR1,CYBC1,DCP1B,FBXW7,SLC27A3,CEBPZOS,RHPN1,SPATA2,ENDOV,VN1R1,ZFP30,FLAD1,BLCAP,MRPL50,PPIE,CLDN15,SETD6,POLI,PRPF39,ETNK1,ENTPD4,TRIM45,PRR36,TMEM41B,GEMIN6,RNF114,ZNF22,PHF1,PABIR2,ABHD11,TMC4,HDAC10,FBXL20,TGIF2,CEP44,CENPC,RBM41,HSF4,PROSER3,NOL9,YJEFN3,NEPRO,NOXA1,POLR2D,CCNL1,TLK1,RGL3,ANKRD54,MEX3D,ANKRA2,VPS33A,VMAC,KRI1,CELF1,BCL2L12,TMEM60,TMEM161B,KRR1,GPR35,RBM45,MICALL2,HSPBAP1,CRYGS,NFXL1,YAE1,DYRK4,R3HDM2,LBHD1,RPS6,FAM160A2,NSMAF,EGFL8,NR2C2AP,PSMG4,DDX31,WDR36,PBX4,TIA1,ALDH16A1,HOOK2,ZNF83,RANBP10,PPP4R3A,MOSMO,SAAL1,POLR1G,RETREG3,KANSL1,ZNF3,MCRIP2,ZNF8,LETM1,ABCD4,PTPN2,WDR77,CDK2,BTG3,VSIG10,TMEM68,SAYSD1,C19orf25,NEIL1,SZT2,POLE,EIF5B,ABHD10,DTX3,KPTN,MTG2,E2F1,RNF215,ZCCHC10,NAT9,ELF2,CRAMP1,LUC7L,ZNF43,PTBP3,PNN,DSN1,LUC7L2,BRD8,UBE2V1,PPAN,CHAF1A,MROH1,CENPJ,C14orf93,DPH7,C4orf47,TRA2A,MAPKAPK5,ZMYND8,POLR3F,NEURL4,HINFP,PCBD2,NR2C1,BRD9,AMY2B,CYTH2,C8orf76,RCC2,B9D2,NOP53,WBP1,RBM33,RAD17,AVL9,NOL8,TONSL,NADSYN1,MOK,IMMP1L,CFAP44,SRRT,AGAP6,TPRA1,CHEK2,GABPB2,ZNF16,PIGA,GEMIN8,MPHOSPH10,GTPBP2,TRIM66,RBM39,EDC3,C15orf61,SLC26A6,SLC25A27,MRPS26,MSL2,IRF3,TMEM161A,ZCCHC8,NRF1,TMEM44,ITFG2,ZNF2,RRNAD1,ZXDC,ESF1,SNRPD2,KAT8,PDS5A,PIGL,PPP5C,KCTD6,ERH,RNF10,CSAD,LRRC37A3,KIAA0895L,RINL,DDX39A,ARV1,NDUFAF6,ZNF77,ATAD3B,HAUS8,SAMD10,MUTYH,RBM28,ZNF74,BANF1,DCAF8,BRI3BP,C2CD5,STAG3L5P-PVRIG2P-PILRB,LAMA5,HJURP,PHYKPL,POFUT2,CACTIN,RUFY3,OGA,ZFP69,NUP42,IFT27,PHKG2,NARF,LARP7,ZC3HC1,PIGM,PPP1R16A,COPS5,SS18L2,SWSAP1,DCAF16,ZC3H4,RICTOR,SNX16,TM2D3,CENPT,OSGEPL1,CHORDC1,ZGLP1,CRLS1,TRIM3,DPP8,MTG1,URI1,WDR55,FAM76B,POGZ,GTPBP3,ANAPC7,USP7,BRWD3,RBM4B,DTWD1,PCNT,C21orf58,TAF1C,UFD1,ADNP,ADAT2,NCOA5,GABRE,MYO19,SURF6,C12orf43,PRIMPOL,RAPGEFL1,UBL5,RPS11,PRDM4,CNKSR1,THAP9,SYNE4,MRNIP,ZNF71,THAP6,SS18L1,ELMOD3,DDX17,TRPM4,PUS7,ING4,SLC7A6,HAUS5,AQR,RSBN1L,RAD52,CEP43,HDAC7,ARVCF,THYN1,LIAS,DYRK1A,NINL,CTDSPL2,TMEM165,INO80,FBXL12,CEP290,SDR39U1,EIF2AK1,ZMYND19,PGGHG,MCM8,TELO2,CDAN1,FBXL6,TEDC1,TRAIP,PCYOX1L,ATAD5,C12orf76,ANO9,WASHC1,ABCC5,TIGD1,KLC1,GPS2,TRIM52,RPL36A,COA8,PCBP4,THAP3,NOL12,SLC22A5,NSA2,CLASRP,CCDC93,MBD6,STAC3,CPT1B,TTC32,MICAL1,MTX3,SIPA1L3,ZMAT1,GOLGA8B,MCM3AP,SPATA33,ABHD3,RPS24,STRADA,SMG9,ZNF18,TIMM29,NKRF,DIDO1,GOLGA8A,CYP2R1,PAM16,PPHLN1,SETD4,SPIRE2,CNOT2,C1orf109,TPRKB,RBM48,PSMC3IP,ASNS,AARSD1,GMEB2,DUSP28,PUM2,NACA,RBM5,USP3,ANP32A,NKTR,SLC35A2,SAP30BP,HPN,ZFP28,BCDIN3D,RAD18,TTC9C,ZCCHC7,C19orf71,ZNF17,SRCAP,DOT1L,CRBN,TTLL3,ZNF84,TOX3,RXRB,PARP6,RHBDD3,GDPGP1,CACNB3,C19orf18,MED10,PDCD6,NDUFV3,UTP15,REX1BD,PLEKHN1,PIAS2,LRP5L,KATNIP,TIPIN,ASXL1,QRICH2,TSC1,TEP1,SIRT6,NAE1,COLCA2,MACROH2A1,MAN2C1,DXO,HSPB11,PDCD7,CCDC112,USP20,DPP9,ANKRD13D,WHAMM,LIG1,NELFA,RABL2B,TRAPPC2,SIRT7,SNRPB2,MRFAP1L1
Exist in public source
NA

check buttonlncRNA targets the promoter region and positively regulates the gene expression.
Only predicted by TDF
DPH7,C14orf93,MICA,ATF7IP,DNASE1,PDCD2L,POC5,C21orf58,DGCR8,OPA3,TNRC18,ULK1,TRA2A,METTL5,STX16,HEMK1,ANAPC10,PDIK1L,ZFP14,TBCC,WDR55,PARP2,PDCD6,STAT2,RGL3,SETD6,PIGM,UBXN7,TATDN2,DAGLB,HIP1R,CCDC66,VMAC,MZF1,TRMT10C,C3orf62,ANKRD54,FAM160B2,ZSWIM1,LRRC57,C2CD5,MYL5,FBXO46,POLR2K,TMEM44,STRADA,PPCDC,SPICE1,NINL,SLC38A9,MOB1B,CDK13,FAM111A,MIDN,PTCD1,ARL14EP,DCAF8,PCNT,YDJC,ITGB3BP,SEH1L,ZNF18,CBFA2T2,DMPK,PFDN4,FBXL12,HSH2D,VARS2,CDK2,EP400NL,UPF3B,KLHDC4,DYRK4,SPDL1,ANP32B,ZNF14,LBHD1,INSR,FBXL20,FAM133B,SRP14,CLASRP,RRP7BP,SDR39U1,TMEM161A,DCP1B,RAD9A,NOL3,FAM122B,MYB,QTRT1,TLK1,ACCS,ENGASE,C2orf68,XPNPEP3,MRPL42,SCNM1,MLLT1,SMG9,THAP6,CYTH2,COMMD3,UBA2,ING5,AIMP1,AARSD1,PCBD2,C8orf76,COG7,ZMYND19,MAP3K1,ATAD5,ZBTB6,MCM3AP,MDM4,TTC32,CCDC174,MSTO1,ZMAT1,LYSMD4,WDR60,HAUS5,KAT2A,RAD52,RPAP3,FASTKD1,EID2B,SMG1,FAM32A,NFKBIB,BAX,TRMU,DDX17,MSL2,IQCE,ZNF720,ZNRF1,ZNF83,GLTSCR2,EVL,STAC3,PRPF3,PIK3C3,CEP89,PRR7,DCLRE1C,SHFM1,THAP3,LCORL,LUC7L,ZFP82,DOT1L,SIN3B,RNF149,BANF1,FAM71E1,YEATS2,SAYSD1,U2AF2,ZNF45,EIF5B,ABHD18,ANKRD26,MAVS,PBX4,RAD17,CCDC130,NELFCD,ABCD4,C21orf59,MFSD8,SPATA2,TRIOBP,NR2C2AP,CCNL1,LRRC37A3,CAMSAP3,CPSF7,TMEM248,SENP5,SLX4,RBM6,TMEM50B,PDCD7,KIAA0556,CDAN1,CDK5RAP1,ANKRD39,GABPB1,GTF2H4,TEAD2,ARV1,ZCCHC10,ABHD11,OSGEPL1,HAUS1,EID2,ZNF3,CBFB,ZNF70,OXLD1,ZNF30,LPAR2,SPATA25,METTL17,TIA1,RBM5,PUS7,CEP290,BCAT2,NME3,C9orf114,ING4,BBC3,COQ6,MYNN,TPRA1,MPLKIP,ZUFSP,B4GALT7,CELF1,ENOSF1,NADSYN1,POLR2D,XRCC2,C14orf79,TMCO6,MPHOSPH10,GEMIN8,CENPJ,DPP8,MLEC,RPSA,TMEM120B,RALGPS1,KIAA0907,SRSF5,PRR14,TRAF5,TRIM27,PSMA2,MAU2,SETD4,PUS10,H2AFX,CCDC137,CCDC106,SUZ12,C19orf18,TEP1,KPTN,COQ7,HSF4,TBRG1,NUPL2,TFCP2,RC3H1,TMX3,WDR59,ODF2,CIRBP
Exist in public source
NA

check buttonlncRNA targets the promoter region and negatively regulates the gene expression.
Only predicted by TDF
DCTN1,TPP1,TINF2,CRTAP,MYH9,RNF19B,CYB5R3,TUBA1B,TSKU,DLST,HK1,GRHPR,MTCH2,ALDH2,MGST1,CD14
Exist in public source
NA

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lncRNA-RNA interaction for CTD-2583A14.8

lncrna_RNA
check buttonlncRNA targets the 3'UTR region and negatively regulates the mRNA.
Only predicted by lncTar
ACAA1,AKR7A2,TUBA1B,DLST,PSMD2,EIF3L,RAB5C,SMPD1,THTPA,ATP6V0D1,RAB31,MYH9,TANGO6,FTH1,TOLLIP,COMT,C1R,PC,PCDHGC3,METRNL,TALDO1,CYB5R3,WDR1,TINF2,EIF4G1,ALDH2,OS9,PEX19,NOMO2,MSRA
Exist in public source
NA

check buttonlncRNA targets the skipped exon region.
-lncRNA and exonskipping events are positively correlated.
lncRNA and exonskipping events positive correlated
LncRNA Ensembl IDLncRNA ENST IDExon IDSkipped ExondGndGGene name with skipped exonTransID with skipped exonORF mutation
ENSG00000269867ENST00000597780exon_skip_386274chr3:108049618-108049651-5.03-0.2286CD47ENST00000361309In-frame
ENSG00000269867ENST00000597780exon_skip_470077chr7:102397619-102397698-9.78-0.1397PRKRIP1ENST00000397912,ENST00000496391Frame-shift
ENSG00000269867ENST00000597780exon_skip_423795chr4:55888887-55888932-7.59-0.2372EXOC1ENST00000346134,ENST00000381295In-frame
ENSG00000269867ENST00000597780exon_skip_44998chr10:110132304-110132400-9.72-0.1800ADD3ENST00000356080In-frame
ENSG00000269867ENST00000597780exon_skip_430601chr4:82842139-82842481-23.80-0.1221SEC31AENST00000355196,ENST00000395310,ENST00000448323In-frame

-lncRNA and exonskipping events are negatively correlated.
lncRNA and exonskipping events negative correlated
LncRNA Ensembl IDLncRNA ENST IDExon IDSkipped ExondGndGGene name with skipped exonTransID with skipped exonLOF
ENSG00000269867ENST00000597780exon_skip_377198chr3:123130479-123130616-14.79-0.1112PDIA5ENST00000316218Frame-shift
ENSG00000269867ENST00000597780exon_skip_11029chr1:154989559-154989707-17.54-0.1319FLAD1ENST00000292180Frame-shift
ENSG00000269867ENST00000597780exon_skip_309204chr19:49181348-49181461-18.92-0.1971TRPM4ENST00000252826Frame-shift
ENSG00000269867ENST00000597780exon_skip_382458chr3:38131595-38131638-9.34-0.2278ACAA1ENST00000333167Frame-shift
ENSG00000269867ENST00000597780exon_skip_7523chr1:78660553-78660654-9.99-0.1009IFI44ENST00000370747Frame-shift
ENSG00000269867ENST00000597780exon_skip_9446chr1:147270931-147271005-9.15-0.1551CHD1LENST00000369258Frame-shift
ENSG00000269867ENST00000597780exon_skip_16568chr1:201989382-201989531-20.13-0.1491RNPEPENST00000295640Frame-shift
ENSG00000269867ENST00000597780exon_skip_41813chr10:68337857-68337996-17.64-0.1819HNRNPH3ENST00000265866Frame-shift
ENSG00000269867ENST00000597780exon_skip_53559chr10:101793912-101793998-13.13-0.3202OGAENST00000361464Frame-shift
ENSG00000269867ENST00000597780exon_skip_59071chr11:47234756-47234934-16.59-0.1327DDB2ENST00000256996Frame-shift
ENSG00000269867ENST00000597780exon_skip_66482chr11:126274926-126275021-10.54-0.1285FOXRED1ENST00000263578Frame-shift
ENSG00000269867ENST00000597780exon_skip_87733chr12:120571190-120571291-11.89-0.1887RNF10ENST00000325954Frame-shift
ENSG00000269867ENST00000597780exon_skip_92074chr12:50142052-50142110-7.36-0.1363CERS5ENST00000317551Frame-shift
ENSG00000269867ENST00000597780exon_skip_95407chr12:95040475-95040597-12.46-0.1246NR2C1ENST00000333003Frame-shift
ENSG00000269867ENST00000597780exon_skip_108095chr14:73955450-73955509-9.33-0.1794COQ6ENST00000334571Frame-shift
ENSG00000269867ENST00000597780exon_skip_114365chr14:74290026-74290118-18.64-0.2273ABCD4ENST00000356924Frame-shift
ENSG00000269867ENST00000597780exon_skip_114376chr14:74293153-74293248-12.30-0.1618ABCD4ENST00000356924Frame-shift
ENSG00000269867ENST00000597780exon_skip_128982chr15:72250844-72250954-17.17-0.2385PARP6ENST00000287196,ENST00000569795Frame-shift
ENSG00000269867ENST00000597780exon_skip_133217chr16:8635038-8635079-9.34-0.3592METTL22ENST00000381920Frame-shift
ENSG00000269867ENST00000597780exon_skip_139422chr16:89114338-89114487-19.70-0.1743ACSF3ENST00000317447,ENST00000406948Frame-shift
ENSG00000269867ENST00000597780exon_skip_290158chr17:42953723-42953778-6.96-0.1450AARSD1ENST00000427569Frame-shift
ENSG00000269867ENST00000597780exon_skip_300663chr19:1425877-1425960-11.74-0.1631DAZAP1ENST00000233078Frame-shift
ENSG00000269867ENST00000597780exon_skip_302168chr19:10680345-10680443-9.85-0.1059ILF3ENST00000590261Frame-shift
ENSG00000269867ENST00000597780exon_skip_319223chr19:43526200-43526349-17.38-0.1287ETHE1ENST00000292147Frame-shift
ENSG00000269867ENST00000597780exon_skip_327433chr2:86125794-86125880-6.98-0.1091PTCD3ENST00000254630Frame-shift
ENSG00000269867ENST00000597780exon_skip_353131chr20:58669290-58669453-23.38-0.1569STX16ENST00000371141Frame-shift
ENSG00000269867ENST00000597780exon_skip_361485chr21:29008239-29008307-9.18-0.2700RWDD2BENST00000493196Frame-shift
ENSG00000269867ENST00000597780exon_skip_370518chr22:50247691-50247776-15.34-0.1871HDAC10ENST00000216271Frame-shift
ENSG00000269867ENST00000597780exon_skip_374497chr3:49999439-49999513-10.27-0.1902RBM6ENST00000266022Frame-shift
ENSG00000269867ENST00000597780exon_skip_380242chr3:186784961-186785101-12.97-0.1365EIF4A2ENST00000323963Frame-shift
ENSG00000269867ENST00000597780exon_skip_438188chr5:141638954-141639021-16.15-0.2991RELL2ENST00000297164,ENST00000444782Frame-shift
ENSG00000269867ENST00000597780exon_skip_444499chr5:138164086-138164133-5.11-0.2044BRD8ENST00000254900Frame-shift
ENSG00000269867ENST00000597780exon_skip_445390chr5:150403120-150403312-26.10-0.1684CD74ENST00000009530In-frame
ENSG00000269867ENST00000597780exon_skip_374581chr3:50110378-50110463-12.70-0.1789RBM5ENST00000347869Frame-shift
ENSG00000269867ENST00000597780exon_skip_75223chr11:72012400-72012442-6.74-0.2592NUMA1ENST00000393695In-frame
ENSG00000269867ENST00000597780exon_skip_96112chr12:109945259-109945349-12.43-0.1535GIT2ENST00000355312In-frame
ENSG00000269867ENST00000597780exon_skip_376144chr3:100311832-100311877-7.87-0.3279TBC1D23ENST00000394144In-frame
ENSG00000269867ENST00000597780exon_skip_382356chr3:37091466-37091538-4.99-0.1085LRRFIP2ENST00000336686In-frame
ENSG00000269867ENST00000597780exon_skip_470719chr7:117134123-117134192-7.32-0.1284ST7ENST00000265437In-frame
ENSG00000269867ENST00000597780exon_skip_104174chr13:79353152-79353224-7.65-0.1159RBM26ENST00000438737In-frame

check buttonlncRNA targets by miRNA.
lncRNA targets by miRNA
LncRNA Ensembl IDmiRNA IDLncRNA ENST IDBinding site in lncRNAScoreEnergyAlign LenPublic source
ENSG00000269867hsa-mir-152ENST00000597780chr19:57867167-57867253192.00-82.2088NA
ENSG00000269867hsa-mir-152ENST00000597780chr19:57867400-57867482154.00-76.0887NA
ENSG00000269867hsa-mir-22ENST00000597780chr19:57867111-57867185228.00-86.5986NA
ENSG00000269867hsa-mir-22ENST00000597780chr19:57867193-57867276178.00-79.5181NA
ENSG00000269867hsa-mir-22ENST00000597780chr19:57867387-57867476167.00-67.5276NA
ENSG00000269867hsa-mir-22ENST00000597780chr19:57867468-57867545165.00-66.7783NA

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Variants for CTD-2583A14.8

check buttonRNA A-to-I editing events in lncRNA.
LncRNAediting IDLncRNA Ensembl IDChromosomeEditing PositionStrandGene TypeGene NameTranscript IDTranscript TypeTranscript Name

check buttonEdited-associated DElncRNAs in cancer.
LncRNA Ensembl IDLncRNA IndexCancer TypeChr_Postion_StrandAVE1AVE2log2FCW-valueP-valueAdjc.p-valueChange

check buttonCorrelation between RNA A-to-I editing events's frequecy and lncRNA expression.
LncRNA Ensembl IDLncRNA IndexCorrelationP-valueAdjc.p-value

check buttonCis-expression quantitative trait loci(cis-eQTL) of lncRNA.
LncRNA Ensembl IDLncRNA NameSNP infoNumber of Positive corelated CancerPositive corelated CancerNumber of Negative corelated CancerNegative corelated Cancer

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lncRNAs regulate the target genes through functioning as enhancers

lncrna_enhancer
check buttonlncRNA regulates differentially expressed genes by function as enhancer.
LncRNA Ensembl IDPC Gene IDPC Gene NamePositive correlated cancersCancer with PC gene up-regulationCancer with PC gene down-regulation
ENSG00000269867ENSG00000004777ARHGAP33ACC,CESC,CHOL,COAD,DLBC,GBM,HNSC,KIRC,KIRP,LGG,LIHC,LUSC,MESO,PAAD,PCPG,PRAD,THCA,THYM,UCSKIRC
ENSG00000269867ENSG00000104859CLASRPACC,BLCA,CHOL,DLBC,ESCA,GBM,HNSC,KICH,KIRC,KIRP,LGG,LIHC,LUAD,LUSC,MESO,OV,PAAD,PCPG,SARC,SKCM,STAD,TGCT,THCA,THYM,UCECKIRC
ENSG00000269867ENSG00000104980TIMM44ACC,CHOL,DLBC,GBM,KICH,KIRC,LGG,LIHC,MESO,PAAD,PCPG,PRAD,THCA,UVMKICH
ENSG00000269867ENSG00000105486LIG1ACC,CHOL,DLBC,GBM,HNSC,KIRC,KIRP,LGG,LIHC,LUSC,OV,PAAD,PCPG,PRAD,TGCT,THCAKIRC
ENSG00000269867ENSG00000105771SMG9ACC,BLCA,CHOL,ESCA,GBM,HNSC,KICH,KIRC,KIRP,LGG,LIHC,LUSC,PAAD,PCPG,PRAD,TGCT,THCAKICH
ENSG00000269867ENSG00000115257PCSK4ACC,BRCA,CHOL,KIRC,KIRP,PAAD,PCPG,THCA,THYMBRCA
ENSG00000269867ENSG00000117616RSRP1ACC,BLCA,CESC,CHOL,COAD,DLBC,ESCA,GBM,HNSC,KIRC,KIRP,LGG,LIHC,LUAD,LUSC,PAAD,PCPG,PRAD,READ,SARC,SKCM,TGCT,THCA,THYM,UCEC,UCS,UVMBLCA,KIRC
ENSG00000269867ENSG00000118162KPTNACC,BLCA,CHOL,GBM,HNSC,LGG,LIHC,LUSC,MESO,PCPG,PRAD,SARC,TGCT,THCABLCA
ENSG00000269867ENSG00000119559C19orf25ACC,CHOL,HNSC,KICH,LGG,LIHC,MESO,PAAD,PCPG,THCAKICH
ENSG00000269867ENSG00000127586CHTF18ACC,BLCA,CHOL,GBM,HNSC,KICH,KIRC,KIRP,LGG,LIHC,LUAD,LUSC,MESO,PAAD,PCPG,PRAD,SARC,THCA,UCSBLCA,KIRC
ENSG00000269867ENSG00000130299GTPBP3ACC,BLCA,CHOL,DLBC,GBM,HNSC,KICH,KIRC,KIRP,LGG,LIHC,PAAD,PRAD,THCA,UVMBLCA
ENSG00000269867ENSG00000130810PPANACC,CHOL,GBM,KICH,LGG,PRAD,READ,TGCT,THCAKICH
ENSG00000269867ENSG00000131398KCNC3ACC,BLCA,CHOL,DLBC,OV,PCPG,THCA,UCSBLCA
ENSG00000269867ENSG00000139631CSADACC,BLCA,BRCA,CESC,COAD,GBM,HNSC,KICH,KIRC,KIRP,LGG,LUAD,LUSC,OV,PAAD,PCPG,PRAD,SKCM,STAD,THCA,THYM,UCEC,UCS,UVMKIRC
ENSG00000269867ENSG00000142002DPP9ACC,GBM,KIRC,KIRP,LGG,LIHC,PAAD,THCAKIRC
ENSG00000269867ENSG00000142530FAM71E1ACC,ESCA,KICH,LIHC,MESO,PCPG,STAD,UCSKICH
ENSG00000269867ENSG00000148824MTG1ACC,BLCA,CHOL,DLBC,ESCA,GBM,HNSC,KIRC,KIRP,LGG,LIHC,PAAD,SKCM,STAD,THCA,UCS,UVMBLCA
ENSG00000269867ENSG00000160439RDH13ACC,BRCA,CESC,CHOL,DLBC,ESCA,KICH,KIRP,LIHC,LUAD,LUSC,OV,PAAD,PCPG,PRAD,READ,SKCM,STAD,TGCT,THCA,UCS,UVMKICH
ENSG00000269867ENSG00000161010MRNIPACC,BLCA,CESC,CHOL,COAD,DLBC,ESCA,GBM,KIRC,KIRP,LGG,OV,PAAD,SKCM,TGCT,THCA,UCS,UVMKIRC
ENSG00000269867ENSG00000162572SCNN1DACC,GBM,KIRC,KIRP,LGG,PAAD,PCPG,PRAD,THYMKIRC
ENSG00000269867ENSG00000164403SHROOM1ACC,BLCA,CESC,ESCA,HNSC,KIRC,PAAD,THCAKIRC
ENSG00000269867ENSG00000166619BLCAPACC,BLCA,CHOL,KICH,LUSC,PAAD,READ,THCAKICH
ENSG00000269867ENSG00000167615LENG8ACC,BLCA,CESC,CHOL,COAD,DLBC,ESCA,GBM,HNSC,KICH,KIRC,KIRP,LGG,LIHC,LUAD,LUSC,OV,PAAD,PCPG,PRAD,SARC,SKCM,THCA,UCS,UVMKIRC
ENSG00000269867ENSG00000167670CHAF1AACC,CHOL,GBM,KICH,LGG,LIHCKICH
ENSG00000269867ENSG00000167747C19orf48ACC,CHOL,GBM,HNSC,KICH,KIRC,LGG,LIHC,LUSC,MESO,OV,PRAD,SARC,TGCT,UCSKICH
ENSG00000269867ENSG00000175265GOLGA8AACC,BLCA,CESC,COAD,ESCA,GBM,HNSC,KIRC,KIRP,LGG,LUAD,LUSC,PAAD,PCPG,PRAD,SARC,SKCM,TGCT,THCA,THYM,UCEC,UCS,UVMBLCA,KIRC
ENSG00000269867ENSG00000175309PHYKPLACC,BLCA,CESC,CHOL,DLBC,ESCA,GBM,HNSC,KIRC,KIRP,LGG,PAAD,SKCM,THCA,THYM,UCEC,UVMKIRC
ENSG00000269867ENSG00000177990DPY19L2ACC,KICH,KIRC,KIRP,PCPG,TGCT,THCA,UCSKICH
ENSG00000269867ENSG00000184465WDR27ACC,BLCA,CESC,CHOL,COAD,DLBC,GBM,KIRC,KIRP,LGG,PAAD,READ,THCA,THYM,UCEC,UCSKIRC
ENSG00000269867ENSG00000204149AGAP6ACC,BLCA,CESC,CHOL,COAD,DLBC,ESCA,GBM,HNSC,KIRC,KIRP,LGG,LIHC,OV,PAAD,READ,SARC,SKCM,STAD,TGCT,THCA,THYM,UCEC,UCS,UVMKIRC
ENSG00000269867ENSG00000204305AGERACC,BLCA,CESC,CHOL,GBM,HNSC,KIRC,KIRP,LGG,LIHC,PAAD,SARC,UCEC,UCS,UVMKIRC
ENSG00000269867ENSG00000205129C4orf47ACC,KIRC,KIRP,TGCT,THCAKIRC
ENSG00000269867ENSG00000215375MYL5ACC,BLCA,CHOL,KIRC,KIRP,LGG,LUAD,PCPG,PRAD,THCAKIRC
ENSG00000269867ENSG00000221978CCNL2ACC,BLCA,CESC,CHOL,COAD,DLBC,ESCA,GBM,HNSC,KIRC,KIRP,LGG,LIHC,LUAD,LUSC,MESO,OV,PAAD,PCPG,PRAD,READ,SARC,SKCM,TGCT,THCA,THYM,UCEC,UCS,UVMBLCA,KIRC
ENSG00000269867ENSG00000250067YJEFN3ACC,BLCA,ESCA,GBM,KIRC,KIRP,LAML,LGG,LUSC,MESO,OV,PAAD,PCPG,PRAD,TGCT,THYMBLCA,KIRC
ENSG00000269867ENSG00000013441CLK1BLCA,CESC,COAD,DLBC,ESCA,GBM,HNSC,KIRC,KIRP,LGG,LIHC,LUAD,LUSC,OV,PAAD,PCPG,PRAD,READ,SKCM,THCA,THYM,UCEC,UCS,UVMKIRC
ENSG00000269867ENSG00000044446PHKA2BLCA,CHOL,ESCA,GBM,HNSC,KIRC,KIRP,LIHC,LUAD,PAAD,PRAD,THCA,THYMKIRC
ENSG00000269867ENSG00000073605GSDMBBLCA,CHOL,GBM,KIRC,KIRP,LGG,LIHC,LUSC,PAAD,SARC,THCA,THYM,UCSKIRC
ENSG00000269867ENSG00000100068LRP5LBLCA,CHOL,DLBC,ESCA,KICH,KIRP,LUAD,LUSC,PAAD,PRAD,TGCT,THCA,THYM,UVMKICH
ENSG00000269867ENSG00000100288CHKBBLCA,CHOL,COAD,GBM,HNSC,KICH,KIRC,KIRP,LGG,LIHC,LUAD,LUSC,PAAD,PCPG,PRAD,READ,SKCM,STAD,TGCT,THCA,THYM,UCEC,UCS,UVMKIRC
ENSG00000269867ENSG00000100429HDAC10BLCA,CHOL,GBM,HNSC,KIRC,KIRP,LGG,LIHC,LUAD,LUSC,MESO,PAAD,PCPG,PRAD,THCAKIRC
ENSG00000269867ENSG00000102287GABREBLCA,CHOL,COAD,HNSC,KIRC,LIHC,PAAD,THCA,UCSKIRC
ENSG00000269867ENSG00000102996MMP15BLCA,ESCA,KICH,PAAD,UCSKICH
ENSG00000269867ENSG00000103460TOX3BLCA,CHOL,ESCA,PAAD,UCSBLCA
ENSG00000269867ENSG00000108352RAPGEFL1BLCA,KIRC,LIHC,PAAD,THCAKIRC
ENSG00000269867ENSG00000108773KAT2ABLCA,CHOL,DLBC,GBM,HNSC,KIRC,KIRP,LGG,LIHC,LUAD,LUSC,MESO,PAAD,PCPG,PRAD,SARC,SKCM,TGCT,THCA,UCEC,UVMBLCA,KIRC
ENSG00000269867ENSG00000113240CLK4BLCA,COAD,DLBC,GBM,HNSC,KIRC,KIRP,LGG,READ,SKCM,THCA,THYM,UCEC,UVMKIRC
ENSG00000269867ENSG00000124839RAB17BLCA,CESC,ESCA,PRAD,READ,UCSBLCA
ENSG00000269867ENSG00000130590SAMD10BLCA,CHOL,GBM,KIRC,KIRP,LIHC,PAAD,PCPG,PRAD,THCABLCA
ENSG00000269867ENSG00000130701RBBP8NLBLCA,CHOL,KICH,PRAD,UCSBLCA,KICH
ENSG00000269867ENSG00000132522GPS2BLCA,CESC,CHOL,DLBC,GBM,KIRC,KIRP,LGG,LUAD,LUSC,MESO,PAAD,PCPG,PRAD,SKCM,STAD,THCA,THYM,UCEC,UCS,UVMKIRC
ENSG00000269867ENSG00000132680KHDC4BLCA,CESC,CHOL,COAD,DLBC,ESCA,GBM,HNSC,KIRC,KIRP,LGG,LIHC,LUAD,LUSC,PAAD,PCPG,PRAD,READ,SKCM,STAD,THCA,UCEC,UCS,UVMBLCA
ENSG00000269867ENSG00000135722FBXL8BLCA,CHOL,HNSC,KIRC,KIRP,LUAD,LUSC,PAAD,PCPG,PRAD,THCABLCA,KIRC
ENSG00000269867ENSG00000139546TARBP2BLCA,CHOL,HNSC,KIRP,LGG,LIHC,MESO,PAAD,PRAD,THCA,UCSBLCA
ENSG00000269867ENSG00000139636LMBR1LBLCA,CHOL,GBM,HNSC,KIRC,KIRP,LGG,LIHC,LUAD,LUSC,PAAD,PCPG,PRAD,TGCT,THCA,THYM,UCS,UVMKIRC
ENSG00000269867ENSG00000142675CNKSR1BLCA,CHOL,LUSC,PAAD,PRAD,THCA,UCSBLCA
ENSG00000269867ENSG00000146083RNF44BLCA,CHOL,KICH,KIRC,LIHCKICH
ENSG00000269867ENSG00000158106RHPN1BLCA,CHOL,HNSC,KIRC,KIRP,LGG,LIHC,PAAD,THCA,THYM,UCSBLCA
ENSG00000269867ENSG00000160072ATAD3BBLCA,CHOL,DLBC,GBM,HNSC,KIRC,KIRP,LGG,LIHC,LUAD,LUSC,MESO,OV,PAAD,PCPG,PRAD,THCA,UVMKIRC
ENSG00000269867ENSG00000160972PPP1R16ABLCA,CHOL,HNSC,PAAD,THCABLCA
ENSG00000269867ENSG00000161328LRRC56BLCA,BRCA,CHOL,KIRP,THCABRCA
ENSG00000269867ENSG00000162650ATXN7L2BLCA,CHOL,DLBC,GBM,KIRC,KIRP,LGG,LUAD,LUSC,PCPG,SARC,THCA,THYM,UVMBLCA
ENSG00000269867ENSG00000163257DCAF16BLCA,CHOL,COAD,DLBC,GBM,HNSC,KICH,KIRC,KIRP,LAML,LIHC,LUAD,READ,SKCM,UVMKICH
ENSG00000269867ENSG00000164855TMEM184ABLCA,CHOL,KICH,KIRC,KIRP,LIHC,PAAD,UCSKICH
ENSG00000269867ENSG00000164938TP53INP1BLCA,KICH,KIRC,KIRP,TGCT,THYM,UVMKICH
ENSG00000269867ENSG00000167535CACNB3BLCA,CHOL,KIRC,KIRP,PAAD,TGCT,THYMBLCA
ENSG00000269867ENSG00000167604NFKBIDBLCA,CHOL,DLBC,GBM,HNSC,KIRC,KIRP,LUAD,PAAD,THCA,UCSKIRC
ENSG00000269867ENSG00000167608TMC4BLCA,BRCA,CESC,CHOL,ESCA,LIHC,PAAD,PRAD,UCSBRCA
ENSG00000269867ENSG00000167702KIFC2BLCA,CHOL,HNSC,KICH,KIRC,KIRP,LIHC,OV,PAAD,THCA,UVMBLCA,KICH,KIRC
ENSG00000269867ENSG00000168781PPIP5K1BLCA,CHOL,KICH,KIRP,LUAD,LUSC,PAAD,PRADKICH
ENSG00000269867ENSG00000172366MCRIP2BLCA,ESCA,HNSC,KICH,PRADKICH
ENSG00000269867ENSG00000172890NADSYN1BLCA,GBM,KICH,KIRC,KIRP,LGG,PAAD,THCA,THYMKICH,KIRC
ENSG00000269867ENSG00000174943KCTD13BLCA,CHOL,HNSC,KICH,KIRC,KIRP,LIHC,PAAD,PRAD,THCA,UVMKIRC
ENSG00000269867ENSG00000175455CCDC14BLCA,CESC,CHOL,COAD,DLBC,GBM,HNSC,KIRC,KIRP,LGG,LIHC,LUAD,LUSC,OV,PAAD,PCPG,PRAD,READ,SKCM,TGCT,THCA,THYM,UCEC,UVMBLCA,KIRC
ENSG00000269867ENSG00000177548RABEP2BLCA,CHOL,HNSC,KICH,KIRC,LGG,LIHC,LUSC,PAAD,PRAD,THCAKICH
ENSG00000269867ENSG00000178188SH2B1BLCA,CESC,CHOL,DLBC,GBM,HNSC,KICH,KIRC,KIRP,LGG,LIHC,LUAD,LUSC,PAAD,PCPG,PRAD,THCA,THYMKICH
ENSG00000269867ENSG00000183248PRR36BLCA,CHOL,KIRP,PCPG,PRADBLCA
ENSG00000269867ENSG00000184307ZDHHC23BLCA,COAD,ESCA,KICH,LIHC,LUAD,TGCTBLCA,KICH
ENSG00000269867ENSG00000185101ANO9BLCA,CESC,CHOL,KIRC,KIRP,PAADKIRC
ENSG00000269867ENSG00000185158LRRC37BBLCA,CHOL,KIRC,KIRP,LUAD,SKCM,STAD,TGCT,THCAKIRC
ENSG00000269867ENSG00000186166CENATACBLCA,CESC,CHOL,COAD,DLBC,ESCA,GBM,HNSC,KICH,KIRC,KIRP,LGG,LIHC,LUAD,LUSC,MESO,OV,PAAD,PCPG,PRAD,READ,SARC,SKCM,STAD,THCA,THYM,UCEC,UCS,UVMKIRC
ENSG00000269867ENSG00000187961KLHL17BLCA,CHOL,DLBC,GBM,HNSC,KIRC,KIRP,LGG,LIHC,LUAD,LUSC,PAAD,PCPG,PRAD,THCA,THYM,UVMBLCA,KIRC
ENSG00000269867ENSG00000188559RALGAPA2BLCA,CESC,CHOL,ESCA,KICH,UCSKICH
ENSG00000269867ENSG00000196123KIAA0895LBLCA,CESC,CHOL,GBM,HNSC,KICH,KIRC,KIRP,LIHC,LUAD,LUSC,MESO,OV,PAAD,PCPG,PRAD,SKCM,THCA,THYM,UCS,UVMKIRC
ENSG00000269867ENSG00000197948FCHSD1BLCA,CHOL,GBM,KIRC,KIRP,LGG,PAAD,THCA,THYMKIRC
ENSG00000269867ENSG00000203772SPRNBLCA,CHOL,HNSC,KIRP,LIHC,PAAD,READ,THCA,UCEC,UVMBLCA
ENSG00000269867ENSG00000204991SPIRE2BLCA,CESC,CHOL,ESCA,GBM,KICH,KIRP,LIHC,LUAD,MESO,PAAD,PCPG,UCSKICH
ENSG00000269867ENSG00000205517RGL3BLCA,CESC,CHOL,ESCA,KICH,KIRC,KIRP,LIHC,LUAD,PAAD,PCPG,THCA,UCSBLCA,KICH
ENSG00000269867ENSG00000205560CPT1BBLCA,CESC,CHOL,DLBC,KICHBLCA,KICH
ENSG00000269867ENSG00000213139CRYGSBLCA,CHOL,DLBC,KIRP,PAAD,TGCT,UCECBLCA
ENSG00000269867ENSG00000214021TTLL3BLCA,CESC,CHOL,COAD,ESCA,GBM,KIRC,KIRP,LGG,LUAD,LUSC,PAAD,PCPG,PRAD,READ,SKCM,THCA,THYM,UCECKIRC
ENSG00000269867ENSG00000215252GOLGA8BBLCA,CESC,CHOL,COAD,DLBC,ESCA,GBM,KICH,KIRC,KIRP,LIHC,LUAD,LUSC,OV,PCPG,PRAD,READ,SKCM,TGCT,THCA,THYM,UCEC,UCS,UVMBLCA,KIRC
ENSG00000269867ENSG00000217930PAM16BLCA,CHOL,DLBC,HNSC,KIRC,KIRP,LGG,MESO,PAAD,PCPG,PRAD,TGCT,THCA,UVMKIRC
ENSG00000269867ENSG00000240230COX19BLCA,CHOL,COAD,DLBC,ESCA,HNSC,KICH,KIRC,KIRP,LGG,LIHC,PAAD,READ,STAD,THCA,UCEC,UVMKICH
ENSG00000269867ENSG00000256525POLG2BLCA,CHOL,COAD,DLBC,ESCA,GBM,HNSC,KIRC,KIRP,LGG,LIHC,LUAD,LUSC,PAAD,PCPG,PRAD,READ,SKCM,STAD,TGCT,THCA,THYM,UVMKIRC
ENSG00000269867ENSG00000273899NOL12BLCA,CHOL,DLBC,GBM,HNSC,KICH,KIRC,KIRP,LGG,LIHC,LUAD,LUSC,PAAD,PCPG,PRAD,TGCT,THCA,THYMKIRC
ENSG00000269867ENSG00000168924LETM1BRCA,CHOL,DLBC,GBM,KICH,LIHC,TGCTKICH
ENSG00000269867ENSG00000101194SLC17A9CESC,DLBC,ESCA,KIRC,KIRP,LIHC,LUAD,PAADKIRC
ENSG00000269867ENSG00000142102PGGHGCESC,CHOL,GBM,HNSC,KIRC,KIRP,LGG,PAAD,THCA,UCS,UVMKIRC
ENSG00000269867ENSG00000154760SLFN13CESC,CHOL,ESCA,KIRC,KIRP,PAADKIRC
ENSG00000269867ENSG00000171105INSRCESC,CHOL,ESCA,KICH,UVMKICH
ENSG00000269867ENSG00000196684HSH2DCESC,ESCA,KIRC,KIRP,LUAD,PAADKIRC
ENSG00000269867ENSG00000213066CEP43CESC,COAD,DLBC,ESCA,KIRC,KIRP,LAML,READ,TGCT,THCA,THYM,UCECKIRC
ENSG00000269867ENSG00000013523ANGEL1CHOL,GBM,KICH,LIHC,TGCTKICH
ENSG00000269867ENSG00000062716VMP1CHOL,COAD,ESCA,HNSC,KIRC,KIRP,LIHC,LUAD,PAAD,SKCM,UVMKIRC
ENSG00000269867ENSG00000070770CSNK2A2CHOL,COAD,KICH,READ,THYMKICH
ENSG00000269867ENSG00000088356PDRG1CHOL,ESCA,KICH,LGG,LIHC,MESO,THCAKICH
ENSG00000269867ENSG00000100099HPS4CHOL,DLBC,GBM,KICH,KIRC,KIRP,LIHC,LUAD,PAAD,SARC,TGCT,UVMKICH
ENSG00000269867ENSG00000103550KNOP1CHOL,KICH,KIRC,LAML,LIHC,READ,STAD,UVMKICH
ENSG00000269867ENSG00000105327BBC3CHOL,ESCA,HNSC,KICH,KIRC,LIHC,PCPG,THYMKICH,KIRC
ENSG00000269867ENSG00000106462EZH2CHOL,GBM,KIRC,KIRP,LGG,LIHC,PAAD,UVMKIRC
ENSG00000269867ENSG00000109881CCDC34CHOL,ESCA,KICH,KIRC,LAML,STAD,THCA,UVMKICH
ENSG00000269867ENSG00000123136DDX39ACHOL,HNSC,KIRC,KIRP,LGG,LIHC,PAAD,PCPG,PRAD,TGCTKIRC
ENSG00000269867ENSG00000133398MED10CHOL,KICH,LGG,LIHC,THCA,UVMKICH
ENSG00000269867ENSG00000134285FKBP11CHOL,ESCA,KIRC,KIRP,TGCTKIRC
ENSG00000269867ENSG00000136270TBRG4CHOL,KICH,LIHC,PAAD,TGCTKICH
ENSG00000269867ENSG00000143554SLC27A3CHOL,KIRC,LGG,TGCT,THCAKIRC
ENSG00000269867ENSG00000145014TMEM44CHOL,DLBC,KIRC,KIRP,LGG,LIHC,PAAD,PCPG,PRAD,THCA,THYMKIRC
ENSG00000269867ENSG00000147437GNRH1CHOL,KIRC,KIRP,PAAD,THYMKIRC
ENSG00000269867ENSG00000161960EIF4A1CHOL,DLBC,GBM,KIRC,KIRP,LGG,LUAD,LUSC,SKCM,UVMKIRC
ENSG00000269867ENSG00000164877MICALL2CHOL,ESCA,HNSC,KIRC,KIRP,LIHC,PAAD,THCAKIRC
ENSG00000269867ENSG00000165724ZMYND19CHOL,KICH,KIRC,KIRP,LGG,LIHC,TGCT,THCAKICH
ENSG00000269867ENSG00000166012TAF1DCHOL,COAD,KIRC,KIRP,LAML,LIHC,LUAD,PAAD,PRAD,READ,SKCM,THCA,THYM,UVMKIRC
ENSG00000269867ENSG00000167548KMT2DCHOL,KICH,KIRC,LIHC,LUADKICH
ENSG00000269867ENSG00000171456ASXL1CHOL,ESCA,GBM,KICH,KIRC,KIRP,LGG,LIHC,LUADKICH
ENSG00000269867ENSG00000177595PIDD1CHOL,GBM,HNSC,KICH,KIRC,KIRP,LGG,LIHC,PAAD,THCAKIRC
ENSG00000269867ENSG00000181085MAPK15CHOL,HNSC,KIRC,KIRP,THCAKIRC
ENSG00000269867ENSG00000182325FBXL6CHOL,GBM,HNSC,KIRC,KIRP,LGG,LIHC,PAAD,TGCT,THCAKIRC
ENSG00000269867ENSG00000182472CAPN12CHOL,KIRC,KIRP,LUSC,PAADKIRC
ENSG00000269867ENSG00000183765CHEK2CHOL,KIRC,KIRP,LIHC,PRAD,TGCT,UVMKIRC
ENSG00000269867ENSG00000183856IQGAP3CHOL,ESCA,GBM,KIRC,LGG,LIHC,PAAD,TGCTKIRC
ENSG00000269867ENSG00000184445KNTC1CHOL,DLBC,GBM,KICH,KIRC,KIRP,LGG,LIHC,LUAD,PAAD,READ,TGCTKICH,KIRC
ENSG00000269867ENSG00000185482STAC3CHOL,KIRC,KIRP,LGG,PCPG,TGCT,UVMKIRC
ENSG00000269867ENSG00000187555USP7CHOL,COAD,KICH,READ,UVMKICH
ENSG00000269867ENSG00000187583PLEKHN1CHOL,KIRC,KIRP,LUSC,PAADKIRC
ENSG00000269867ENSG00000188827SLX4CHOL,KICH,KIRC,KIRP,LUSC,PAADKICH
ENSG00000269867ENSG00000189227C15orf61CHOL,KICH,PRAD,TGCT,UVMKICH
ENSG00000269867ENSG00000205268PDE7ACHOL,COAD,KIRC,LGG,LIHC,TGCT,THCA,UVMKIRC
ENSG00000269867ENSG00000213923CSNK1ECHOL,KICH,KIRC,KIRP,LIHC,LUSC,PRAD,TGCTKIRC
ENSG00000269867ENSG00000214193SH3D21CHOL,KIRC,LUSC,PAAD,PRAD,TGCT,THCAKIRC
ENSG00000269867ENSG00000214290COLCA2CHOL,KICH,KIRP,LIHC,PAAD,THCAKICH
ENSG00000269867ENSG00000215440NPEPL1CHOL,GBM,HNSC,KIRC,KIRP,LGG,LIHC,LUAD,LUSC,MESO,PAAD,PCPG,PRAD,THCA,UCECKIRC
ENSG00000269867ENSG00000240038AMY2BCHOL,GBM,KIRC,KIRP,LGG,LUAD,THCA,THYMKIRC
ENSG00000269867ENSG00000241343RPL36ACHOL,KICH,PCPG,READ,SKCMKICH
ENSG00000269867ENSG00000278259MYO19CHOL,GBM,KICH,KIRC,KIRP,LGG,LIHC,PAAD,PRAD,UVMKICH
ENSG00000269867ENSG00000103995CEP152COAD,KICH,LAML,SKCM,TGCTKICH
ENSG00000269867ENSG00000069493CLEC2DDLBC,GBM,KIRC,KIRP,LGG,LUAD,TGCT,UCSKIRC
ENSG00000269867ENSG00000131368MRPS25ESCA,GBM,KICH,KIRP,LUAD,PRAD,READ,THCA,UVMKICH
ENSG00000269867ENSG00000135596MICAL1ESCA,GBM,HNSC,KIRC,KIRP,LIHC,PAAD,TGCT,THYMKIRC
ENSG00000269867ENSG00000185189NRBP2GBM,KIRC,KIRP,LGG,THCA,UVMKIRC
ENSG00000269867ENSG00000266338NBPF15GBM,KIRC,KIRP,LIHC,TGCT,UVMKIRC
ENSG00000269867ENSG00000127922SEM1KICH,KIRP,LGG,READ,STAD,TGCT,THCA,UVMKICH
ENSG00000269867ENSG00000130204TOMM40KICH,LGG,MESO,PCPG,PRAD,THCAKICH
ENSG00000269867ENSG00000188549CCDC9BKICH,KIRC,KIRP,LIHC,UVMKICH
ENSG00000269867ENSG00000104881PPP1R13LKIRC,KIRP,LIHC,LUSC,OV,UCSKIRC
ENSG00000269867ENSG00000198604BAZ1AKIRC,KIRP,LAML,LIHC,READ,STAD,UVMKIRC

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lncRNAs regulate the target genes through recruiting transcript factors

lncrna_TF
check buttonLncRNA-TF complex positively regulates the gene expression by target promoter region (#cancer types with positive correlation >= 5).
lncRNA IDTF IDTF NamePCgene IDPCgene NameNumber of CancerCanaer Types
ENSG00000269867ENSG00000104885DOT1LENSG00000148399DPH78CHOL,GBM,KIRC,KIRP,LGG,LIHC,PAAD,TGCT
ENSG00000269867ENSG00000236287ZBED5ENSG00000148399DPH710BLCA,CHOL,DLBC,HNSC,KIRC,KIRP,LIHC,PAAD,SKCM,THCA
ENSG00000269867ENSG00000236287ZBED5ENSG00000100802C14orf935CHOL,HNSC,KIRP,LIHC,THCA
ENSG00000269867ENSG00000236287ZBED5ENSG00000171681ATF7IP5CHOL,COAD,LIHC,LUAD,READ
ENSG00000269867ENSG00000236287ZBED5ENSG00000213918DNASE15BLCA,LUAD,SKCM,THCA,THYM
ENSG00000269867ENSG00000256223ZNF10ENSG00000213918DNASE19BLCA,CESC,GBM,LUAD,PRAD,SKCM,THCA,UCEC,UCS
ENSG00000269867ENSG00000236287ZBED5ENSG00000152359POC57CHOL,HNSC,KIRC,KIRP,LIHC,SKCM,THCA
ENSG00000269867ENSG00000256223ZNF10ENSG00000152359POC56ACC,KIRP,LAML,SKCM,TGCT,THCA
ENSG00000269867ENSG00000104885DOT1LENSG00000128191DGCR88CHOL,GBM,KIRC,KIRP,LGG,LIHC,PAAD,PRAD
ENSG00000269867ENSG00000167232ZNF91ENSG00000128191DGCR85CHOL,DLBC,GBM,KIRP,PAAD
ENSG00000269867ENSG00000236287ZBED5ENSG00000128191DGCR89BLCA,CHOL,DLBC,HNSC,KIRC,KIRP,LIHC,PAAD,THCA
ENSG00000269867ENSG00000256223ZNF10ENSG00000128191DGCR88BLCA,DLBC,GBM,KIRC,KIRP,LUSC,PRAD,THCA
ENSG00000269867ENSG00000104885DOT1LENSG00000182095TNRC185CHOL,GBM,LGG,LIHC,PAAD
ENSG00000269867ENSG00000104885DOT1LENSG00000177169ULK16CHOL,KIRC,KIRP,LIHC,PAAD,TGCT
ENSG00000269867ENSG00000167232ZNF91ENSG00000164548TRA2A10CHOL,COAD,DLBC,ESCA,GBM,KIRP,LUAD,PAAD,READ,SKCM
ENSG00000269867ENSG00000236287ZBED5ENSG00000164548TRA2A14BLCA,CHOL,COAD,DLBC,HNSC,KIRC,KIRP,LIHC,LUAD,PAAD,READ,SKCM,TGCT,THCA
ENSG00000269867ENSG00000256223ZNF10ENSG00000164548TRA2A13ACC,BLCA,DLBC,GBM,KIRC,KIRP,LUAD,LUSC,PRAD,SKCM,TGCT,THCA,UCEC
ENSG00000269867ENSG00000104885DOT1LENSG00000124222STX168CHOL,GBM,KIRC,KIRP,LGG,LIHC,PAAD,PRAD
ENSG00000269867ENSG00000167232ZNF91ENSG00000124222STX169CHOL,COAD,ESCA,GBM,KIRP,LUAD,PAAD,READ,SKCM
ENSG00000269867ENSG00000236287ZBED5ENSG00000124222STX1613BLCA,CHOL,COAD,HNSC,KIRC,KIRP,LIHC,LUAD,PAAD,READ,SKCM,THCA,THYM
ENSG00000269867ENSG00000256223ZNF10ENSG00000124222STX1610BLCA,GBM,KIRP,LUAD,LUSC,PRAD,SKCM,TGCT,THCA,UCEC
ENSG00000269867ENSG00000104885DOT1LENSG00000114735HEMK15KIRC,KIRP,LGG,PAAD,PRAD
ENSG00000269867ENSG00000236287ZBED5ENSG00000114735HEMK15KIRC,KIRP,LUAD,PAAD,THCA
ENSG00000269867ENSG00000256223ZNF10ENSG00000114735HEMK16BLCA,KIRC,KIRP,LUAD,PRAD,THCA
ENSG00000269867ENSG00000104885DOT1LENSG00000142065ZFP145CHOL,GBM,KIRP,LGG,TGCT
ENSG00000269867ENSG00000167232ZNF91ENSG00000142065ZFP149ACC,CHOL,DLBC,ESCA,GBM,KIRP,LAML,LUAD,SKCM
ENSG00000269867ENSG00000236287ZBED5ENSG00000142065ZFP149BLCA,CHOL,DLBC,KIRC,KIRP,LUAD,SKCM,TGCT,THCA
ENSG00000269867ENSG00000256223ZNF10ENSG00000142065ZFP1412ACC,BLCA,CESC,DLBC,GBM,KIRC,KIRP,LAML,LUAD,SKCM,TGCT,THCA
ENSG00000269867ENSG00000236287ZBED5ENSG00000124659TBCC5CHOL,HNSC,LIHC,THCA,THYM
ENSG00000269867ENSG00000104885DOT1LENSG00000129484PARP26CHOL,GBM,KIRC,LIHC,PRAD,TGCT
ENSG00000269867ENSG00000256223ZNF10ENSG00000129484PARP25GBM,KIRC,PRAD,TGCT,THCA
ENSG00000269867ENSG00000104885DOT1LENSG00000170581STAT25CHOL,KIRC,KIRP,LGG,TGCT
ENSG00000269867ENSG00000104885DOT1LENSG00000205517RGL35CHOL,KIRC,KIRP,LIHC,PAAD
ENSG00000269867ENSG00000236287ZBED5ENSG00000205517RGL36BLCA,CHOL,KIRC,KIRP,LIHC,THCA
ENSG00000269867ENSG00000104885DOT1LENSG00000103037SETD67CHOL,GBM,KIRC,KIRP,LGG,PAAD,TGCT
ENSG00000269867ENSG00000167232ZNF91ENSG00000103037SETD65CHOL,GBM,KIRP,PAAD,SKCM
ENSG00000269867ENSG00000236287ZBED5ENSG00000103037SETD68CHOL,COAD,KIRC,KIRP,LIHC,PAAD,SKCM,THCA
ENSG00000269867ENSG00000256223ZNF10ENSG00000103037SETD67GBM,KIRC,KIRP,LUAD,SKCM,TGCT,THCA
ENSG00000269867ENSG00000167232ZNF91ENSG00000180376CCDC668COAD,ESCA,GBM,KIRP,LAML,LUAD,READ,SKCM
ENSG00000269867ENSG00000236287ZBED5ENSG00000180376CCDC668BLCA,COAD,KIRP,LUAD,READ,SKCM,TGCT,THCA
ENSG00000269867ENSG00000256223ZNF10ENSG00000180376CCDC6611BLCA,CESC,GBM,KIRP,LAML,LUAD,PRAD,SKCM,TGCT,THCA,UCEC
ENSG00000269867ENSG00000236287ZBED5ENSG00000187650VMAC9BLCA,CHOL,HNSC,KIRC,KIRP,LIHC,LUAD,PAAD,THCA
ENSG00000269867ENSG00000256223ZNF10ENSG00000187650VMAC5BLCA,GBM,KIRC,KIRP,THCA
ENSG00000269867ENSG00000104885DOT1LENSG00000099326MZF18CHOL,GBM,KIRC,KIRP,LGG,LIHC,PAAD,PRAD
ENSG00000269867ENSG00000236287ZBED5ENSG00000099326MZF111BLCA,CHOL,DLBC,HNSC,KIRC,KIRP,LIHC,LUAD,SKCM,THCA,THYM
ENSG00000269867ENSG00000256223ZNF10ENSG00000099326MZF112ACC,BLCA,CESC,DLBC,GBM,KIRC,KIRP,LUAD,PRAD,SKCM,THCA,UCS
ENSG00000269867ENSG00000236287ZBED5ENSG00000188315C3orf629BLCA,CHOL,KIRC,KIRP,LIHC,LUAD,READ,SKCM,THCA
ENSG00000269867ENSG00000256223ZNF10ENSG00000188315C3orf628BLCA,KIRC,KIRP,LUAD,PRAD,SKCM,THCA,UCEC
ENSG00000269867ENSG00000104885DOT1LENSG00000158863FAM160B26CHOL,GBM,KIRC,KIRP,LGG,PAAD
ENSG00000269867ENSG00000104885DOT1LENSG00000168612ZSWIM18CHOL,GBM,KIRP,LGG,LIHC,PAAD,PRAD,TGCT
ENSG00000269867ENSG00000236287ZBED5ENSG00000168612ZSWIM17CHOL,DLBC,HNSC,KIRP,LIHC,PAAD,THCA
ENSG00000269867ENSG00000167232ZNF91ENSG00000111731C2CD55CHOL,DLBC,ESCA,KIRP,SKCM
ENSG00000269867ENSG00000236287ZBED5ENSG00000111731C2CD55CHOL,DLBC,KIRP,LIHC,SKCM
ENSG00000269867ENSG00000104885DOT1LENSG00000177051FBXO4610CHOL,GBM,KICH,KIRC,KIRP,LGG,LIHC,PAAD,PRAD,TGCT
ENSG00000269867ENSG00000236287ZBED5ENSG00000177051FBXO467CHOL,DLBC,KIRP,PAAD,TGCT,THCA,THYM
ENSG00000269867ENSG00000256223ZNF10ENSG00000177051FBXO466DLBC,GBM,KIRP,TGCT,THCA,UCS
ENSG00000269867ENSG00000236287ZBED5ENSG00000145014TMEM445CHOL,DLBC,KIRP,LIHC,THYM
ENSG00000269867ENSG00000104885DOT1LENSG00000266173STRADA6CHOL,GBM,KIRC,KIRP,LGG,PAAD
ENSG00000269867ENSG00000167232ZNF91ENSG00000266173STRADA5CHOL,GBM,KIRP,LUAD,PAAD
ENSG00000269867ENSG00000236287ZBED5ENSG00000266173STRADA7BLCA,CHOL,KIRC,KIRP,LUAD,PAAD,THCA
ENSG00000269867ENSG00000256223ZNF10ENSG00000266173STRADA6BLCA,GBM,KIRC,KIRP,LUAD,THCA
ENSG00000269867ENSG00000167232ZNF91ENSG00000163611SPICE17CHOL,COAD,GBM,KIRP,LAML,LUAD,SKCM
ENSG00000269867ENSG00000236287ZBED5ENSG00000163611SPICE16CHOL,COAD,KIRC,KIRP,LUAD,SKCM
ENSG00000269867ENSG00000256223ZNF10ENSG00000163611SPICE16GBM,KIRC,KIRP,LAML,LUAD,SKCM
ENSG00000269867ENSG00000236287ZBED5ENSG00000065883CDK135CHOL,COAD,KIRC,KIRP,LIHC
ENSG00000269867ENSG00000104885DOT1LENSG00000166801FAM111A7CHOL,GBM,KIRC,KIRP,LGG,LIHC,PAAD
ENSG00000269867ENSG00000167232ZNF91ENSG00000166801FAM111A5CHOL,COAD,KIRP,PAAD,READ
ENSG00000269867ENSG00000236287ZBED5ENSG00000166801FAM111A10BLCA,CHOL,COAD,HNSC,KIRC,KIRP,LIHC,PAAD,READ,THYM
ENSG00000269867ENSG00000256223ZNF10ENSG00000166801FAM111A6BLCA,CESC,GBM,KIRC,KIRP,UCEC
ENSG00000269867ENSG00000104885DOT1LENSG00000132716DCAF85CHOL,KIRC,KIRP,LGG,PAAD
ENSG00000269867ENSG00000236287ZBED5ENSG00000132716DCAF810CHOL,COAD,DLBC,HNSC,KIRC,KIRP,LUAD,PAAD,READ,THCA
ENSG00000269867ENSG00000256223ZNF10ENSG00000132716DCAF88BLCA,DLBC,GBM,KIRC,KIRP,LUAD,THCA,UCS
ENSG00000269867ENSG00000236287ZBED5ENSG00000142856ITGB3BP6CHOL,HNSC,KIRP,LIHC,SKCM,THYM
ENSG00000269867ENSG00000236287ZBED5ENSG00000154957ZNF186CHOL,HNSC,KIRC,KIRP,READ,THCA
ENSG00000269867ENSG00000104885DOT1LENSG00000078699CBFA2T27CHOL,GBM,KICH,KIRC,KIRP,LIHC,TGCT
ENSG00000269867ENSG00000236287ZBED5ENSG00000078699CBFA2T26CHOL,COAD,KIRC,KIRP,LIHC,READ
ENSG00000269867ENSG00000256223ZNF10ENSG00000078699CBFA2T25GBM,KIRC,KIRP,LUSC,TGCT
ENSG00000269867ENSG00000236287ZBED5ENSG00000104936DMPK5CHOL,KIRC,KIRP,LIHC,THCA
ENSG00000269867ENSG00000104885DOT1LENSG00000127452FBXL128CHOL,GBM,KIRC,KIRP,LGG,LIHC,PAAD,TGCT
ENSG00000269867ENSG00000236287ZBED5ENSG00000127452FBXL129BLCA,CHOL,DLBC,KIRC,KIRP,LIHC,PAAD,THCA,THYM
ENSG00000269867ENSG00000256223ZNF10ENSG00000127452FBXL125BLCA,DLBC,KIRP,TGCT,THCA
ENSG00000269867ENSG00000256223ZNF10ENSG00000185684EP400P16BLCA,CESC,DLBC,GBM,LUAD,UCEC
ENSG00000269867ENSG00000104885DOT1LENSG00000125351UPF3B5CHOL,KIRC,KIRP,LGG,LIHC
ENSG00000269867ENSG00000236287ZBED5ENSG00000125351UPF3B7CHOL,KIRC,KIRP,LIHC,PAAD,SKCM,THCA
ENSG00000269867ENSG00000104885DOT1LENSG00000104731KLHDC45CHOL,GBM,KIRC,LGG,PAAD
ENSG00000269867ENSG00000167232ZNF91ENSG00000105708ZNF146ACC,CHOL,DLBC,GBM,LAML,SKCM
ENSG00000269867ENSG00000236287ZBED5ENSG00000105708ZNF145BLCA,CHOL,DLBC,SKCM,TGCT
ENSG00000269867ENSG00000256223ZNF10ENSG00000105708ZNF146ACC,BLCA,DLBC,LAML,SKCM,TGCT
ENSG00000269867ENSG00000236287ZBED5ENSG00000162194LBHD15BLCA,DLBC,KIRP,PAAD,SKCM
ENSG00000269867ENSG00000236287ZBED5ENSG00000108306FBXL205CHOL,KIRC,KIRP,LIHC,LUAD
ENSG00000269867ENSG00000104885DOT1LENSG00000104859CLASRP9CHOL,GBM,KICH,KIRC,KIRP,LGG,LIHC,PAAD,TGCT
ENSG00000269867ENSG00000236287ZBED5ENSG00000104859CLASRP11BLCA,CHOL,DLBC,HNSC,KIRC,KIRP,LIHC,PAAD,SKCM,THCA,THYM
ENSG00000269867ENSG00000256223ZNF10ENSG00000104859CLASRP8ACC,BLCA,DLBC,GBM,KIRP,LUSC,TGCT,THCA
ENSG00000269867ENSG00000104885DOT1LENSG00000100445SDR39U15CHOL,GBM,KIRC,PAAD,PRAD
ENSG00000269867ENSG00000236287ZBED5ENSG00000100445SDR39U16CHOL,DLBC,HNSC,KIRC,PAAD,THCA
ENSG00000269867ENSG00000256223ZNF10ENSG00000100445SDR39U15DLBC,GBM,KIRC,PRAD,THCA
ENSG00000269867ENSG00000104885DOT1LENSG00000172613RAD9A7CHOL,GBM,KIRC,KIRP,LGG,LIHC,PAAD
ENSG00000269867ENSG00000236287ZBED5ENSG00000172613RAD9A9BLCA,CHOL,HNSC,KIRC,KIRP,LIHC,PAAD,THCA,THYM
ENSG00000269867ENSG00000236287ZBED5ENSG00000156504PABIR26CHOL,COAD,KIRC,KIRP,LIHC,PAAD
ENSG00000269867ENSG00000104885DOT1LENSG00000213339QTRT17CHOL,GBM,KICH,KIRC,KIRP,LGG,PAAD
ENSG00000269867ENSG00000167232ZNF91ENSG00000198586TLK15CHOL,COAD,DLBC,GBM,LAML
ENSG00000269867ENSG00000236287ZBED5ENSG00000110455ACCS7BLCA,HNSC,KIRC,KIRP,PAAD,SKCM,THCA
ENSG00000269867ENSG00000104885DOT1LENSG00000167280ENGASE8CHOL,GBM,KIRC,KIRP,LGG,LIHC,PAAD,PRAD
ENSG00000269867ENSG00000236287ZBED5ENSG00000167280ENGASE12BLCA,CHOL,DLBC,HNSC,KIRC,KIRP,LIHC,LUAD,PAAD,SKCM,THCA,THYM
ENSG00000269867ENSG00000256223ZNF10ENSG00000167280ENGASE8BLCA,DLBC,GBM,KIRP,LUSC,PRAD,SKCM,THCA
ENSG00000269867ENSG00000236287ZBED5ENSG00000168887C2orf686CHOL,KIRC,KIRP,LIHC,PAAD,THCA
ENSG00000269867ENSG00000104885DOT1LENSG00000130382MLLT15CHOL,GBM,KICH,LGG,LIHC
ENSG00000269867ENSG00000104885DOT1LENSG00000105771SMG97CHOL,GBM,KICH,KIRC,KIRP,LGG,LIHC
ENSG00000269867ENSG00000167232ZNF91ENSG00000174796THAP65COAD,KIRP,LAML,LUAD,SKCM
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ENSG00000269867ENSG00000104885DOT1LENSG00000100650SRSF56GBM,KIRC,KIRP,LGG,PAAD,PRAD
ENSG00000269867ENSG00000167232ZNF91ENSG00000100650SRSF56ACC,DLBC,GBM,KIRP,PAAD,SKCM
ENSG00000269867ENSG00000236287ZBED5ENSG00000100650SRSF59DLBC,HNSC,KIRC,KIRP,LUAD,PAAD,SKCM,THCA,THYM
ENSG00000269867ENSG00000256223ZNF10ENSG00000100650SRSF59DLBC,GBM,KIRC,KIRP,LUAD,LUSC,PRAD,SKCM,THCA
ENSG00000269867ENSG00000104885DOT1LENSG00000156858PRR147CHOL,KIRC,KIRP,LGG,LIHC,PAAD,PRAD
ENSG00000269867ENSG00000236287ZBED5ENSG00000156858PRR147BLCA,CHOL,HNSC,KIRP,LIHC,PAAD,THCA
ENSG00000269867ENSG00000236287ZBED5ENSG00000082512TRAF57COAD,HNSC,KIRC,KIRP,LUAD,READ,SKCM
ENSG00000269867ENSG00000104885DOT1LENSG00000129933MAU29CHOL,GBM,KICH,KIRC,KIRP,LGG,LIHC,PAAD,TGCT
ENSG00000269867ENSG00000167232ZNF91ENSG00000129933MAU27ACC,CHOL,DLBC,GBM,KIRP,PAAD,SKCM
ENSG00000269867ENSG00000236287ZBED5ENSG00000129933MAU211BLCA,CHOL,DLBC,KIRC,KIRP,LIHC,LUAD,PAAD,SKCM,TGCT,THCA
ENSG00000269867ENSG00000256223ZNF10ENSG00000129933MAU26BLCA,DLBC,GBM,KIRP,TGCT,THCA
ENSG00000269867ENSG00000104885DOT1LENSG00000185917SETD48CHOL,GBM,KIRC,KIRP,LIHC,PAAD,PRAD,TGCT
ENSG00000269867ENSG00000236287ZBED5ENSG00000185917SETD412BLCA,CHOL,COAD,HNSC,KIRC,KIRP,LIHC,LUAD,PAAD,SKCM,TGCT,THCA
ENSG00000269867ENSG00000256223ZNF10ENSG00000185917SETD412ACC,BLCA,GBM,KIRC,KIRP,LUAD,PRAD,SKCM,TGCT,THCA,UCEC,UCS
ENSG00000269867ENSG00000256223ZNF10ENSG00000177025C19orf186ACC,BLCA,GBM,LAML,PRAD,UCEC
ENSG00000269867ENSG00000236287ZBED5ENSG00000129566TEP15CHOL,DLBC,KIRC,LIHC,PAAD
ENSG00000269867ENSG00000104885DOT1LENSG00000118162KPTN5CHOL,GBM,LGG,LIHC,TGCT
ENSG00000269867ENSG00000236287ZBED5ENSG00000102878HSF46BLCA,HNSC,KIRC,KIRP,PAAD,THCA
ENSG00000269867ENSG00000256223ZNF10ENSG00000102878HSF45BLCA,KIRP,PRAD,THCA,UCEC
ENSG00000269867ENSG00000236287ZBED5ENSG00000154144TBRG18BLCA,KIRC,KIRP,LIHC,LUAD,PAAD,THCA,THYM
ENSG00000269867ENSG00000256223ZNF10ENSG00000154144TBRG16BLCA,KIRC,KIRP,LUAD,THCA,UCEC
ENSG00000269867ENSG00000167232ZNF91ENSG00000136243NUP426CHOL,COAD,DLBC,KIRP,PAAD,SKCM
ENSG00000269867ENSG00000236287ZBED5ENSG00000136243NUP4211BLCA,CHOL,COAD,DLBC,HNSC,KIRC,KIRP,LIHC,PAAD,SKCM,THCA
ENSG00000269867ENSG00000256223ZNF10ENSG00000136243NUP426BLCA,DLBC,KIRC,KIRP,SKCM,THCA
ENSG00000269867ENSG00000236287ZBED5ENSG00000135457TFCP25CHOL,COAD,DLBC,LIHC,READ
ENSG00000269867ENSG00000167232ZNF91ENSG00000135870RC3H18CHOL,COAD,DLBC,GBM,KIRP,LUAD,READ,SKCM
ENSG00000269867ENSG00000236287ZBED5ENSG00000135870RC3H19CHOL,COAD,DLBC,KIRP,LIHC,LUAD,READ,SKCM,TGCT
ENSG00000269867ENSG00000256223ZNF10ENSG00000135870RC3H17DLBC,GBM,KIRP,LUAD,SKCM,TGCT,UCS
ENSG00000269867ENSG00000236287ZBED5ENSG00000166479TMX35CHOL,DLBC,KIRP,LIHC,TGCT
ENSG00000269867ENSG00000104885DOT1LENSG00000103091WDR595CHOL,KIRC,KIRP,LGG,PRAD
ENSG00000269867ENSG00000236287ZBED5ENSG00000103091WDR597BLCA,KIRC,KIRP,LUAD,PAAD,THCA,THYM
ENSG00000269867ENSG00000256223ZNF10ENSG00000103091WDR597BLCA,KIRC,KIRP,LUAD,PRAD,THCA,UCS
ENSG00000269867ENSG00000104885DOT1LENSG00000136811ODF25CHOL,GBM,LGG,LIHC,TGCT
ENSG00000269867ENSG00000236287ZBED5ENSG00000099622CIRBP6BLCA,CHOL,HNSC,KIRP,LIHC,THCA

check buttonLncRNA-TF complex negatively regulates the gene expression by target promoter region (#cancer types with negative correlation >= 5).
lncRNA IDTF IDTF NamePCgene IDPCgene NameNumber of CancerCanaer Types

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lncRNAs regulate the alternative splicing event through interacting with splicing factor

lncrna_AS
check buttonLncRNA-RBP complex positively regulates the exon skippping events by target skipped eoxon region.
LncRNA Ensembl IDRBP IDRBP Gene NameExon Skipping IDSkipped ExonEX Gene NameEX Affected TransIDORF_annoCancer Type

check buttonLncRNA-RBP complex negatively regulates the exon skippping events by target skipped eoxon region.
LncRNA Ensembl IDRBP IDRBP Gene NameExon Skipping IDSkipped ExonEX Gene NameEX Affected TransIDORF_annoCancer Type

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lncRNAs regulate mRNA through targeting the 3'-UTR region

lncrna_mRNA
check buttonlncRNA regulates differential expressed mRNA by directly targeting 3' UTR region.
LncRNA Ensembl IDLncRNA ENST IDPC Gene NamePC Gene IDPC ENST IDdGnDGCancer with PC gene up-regulationCancer with PC gene Down-regulation
ENSG00000269867ENST00000597780PCDHGC3ENSG00000240184ENST00000611950-0.1503133-KICH,BLCA
ENSG00000269867ENST00000597780PCDHGC3ENSG00000240184ENST00000617222-0.277491-KICH,BLCA
ENSG00000269867ENST00000597780C1RENSG00000159403ENST00000536053-0.105774-KICH,BLCA
ENSG00000269867ENST00000597780C1RENSG00000159403ENST00000535233-0.105774-KICH,BLCA
ENSG00000269867ENST00000597780MSRAENSG00000175806ENST00000441698-0.368252-KIRC,KICH,BRCA
ENSG00000269867ENST00000597780MSRAENSG00000175806ENST00000518255-1.0050295-KIRC,KICH,BRCA
ENSG00000269867ENST00000597780MSRAENSG00000175806ENST00000521686-0.10191-KIRC,KICH,BRCA
ENSG00000269867ENST00000597780AKR7A2ENSG00000053371ENST00000489286-0.1359387-KICH

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lncRNAs regulate mRNA by competing with miRNA

lncrna_miRNA
check buttonlncRNA regulates mRNA by competing the miRNA binding site with mRNA.
LncRNA Ensembl IDlncRNA-miRNA-mRNACancer Types
ENSG00000269867CTD-2583A14.8,hsa-mir-152,COX7CKICH,TGCT,CHOL,PRAD,UCS
ENSG00000269867CTD-2583A14.8,hsa-mir-152,HIGD2AKICH,TGCT,CHOL,PRAD,UCS

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lncRNA coding potential

check buttonORFfinder result for the gencode.v22.lncRNA.transcript.fa.
lncRNA Ensembl IDlncRNA ENST IDlength(AA)start at transcriptend at transcript
ENSG00000269867.1ENST00000597780.189130399