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Center for Computational Systems Medicine
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lncRNA summary

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lncRNA structure and expression level

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lncRNA-Protein interaction

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lncRNA-DNA interaction

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lncRNA-RNA interaction

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Variants in lncRNA

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lncRNAs regulate the target genes through functioning as enhancers

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lncRNAs regulate the target genes through recruiting transcript factors

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lncRNAs regulate the alternative splicing events through interacting with splicing factor

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lncRNAs regulate mRNA through targeting the 3'-UTR region

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lncRNAs regulate mRNA by competing with miRNA

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lncRNA coding potential

lncRNA: ENSG00000269352

Summary for PTOV1-AS2

check button Gene summary

Gene informationEnsembl ID

ENSG00000269352

Gene symbol

PTOV1-AS2

Gene namePTOV1 antisense RNA 2
HGNC

51284

Entrez ID
Gene typeantisense
Synonyms19q13.33|PTOV1-AS2
UniProtAcc

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Structure and expression level for PTOV1-AS2

check buttonDifferentially expressed gene analysis between cancer and normal samples.
DEG result
Ensembl IDBase meanlog2FC(AD/control)lfcSEStatP-valueAdjc.p-valueDEG direction Cancer type
ENSG000002693521.454802e+022.056235e+001.565253e-011.313676e+012.030000e-393.170000e-38UPKIRC
ENSG000002693521.946844e+021.092224e+002.109719e-015.177106e+002.250000e-072.340000e-06UPBLCA
ENSG000002693522.090932e+021.004833e+001.216328e-018.261198e+001.440000e-162.340000e-15UPPRAD
ENSG000002693526.418784e+011.071353e+001.366122e-017.842290e+004.420000e-154.980000e-14UPLIHC
ENSG000002693529.780514e+011.557595e+002.738005e-015.688795e+001.280000e-082.570000e-07UPREAD

check buttonCorrelation between lncRNAs and cancer stages.
LncRNA Ensembl IDCorrelationP-valueCancer TypeAdjc.p-value
ENSG000002693523.064529e-016.714527e-03ACC1.785519e-02
ENSG000002693525.548562e-017.638827e-05CHOL2.539231e-04
ENSG000002693523.071195e-011.685191e-13PRAD9.245012e-13

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lncRNA-Protein interaction for PTOV1-AS2

lncrna_protein
check buttonlncRNA-epigenetic factor interaction (#cancer types with positive correlation >= 5).
Epi result
LncRNA Ensembl IDLncRNA ENST IDLncRNA NameProtein Ensembl IDProtein NameCatRAPID ScoreLncpro ScoreUniPortIDGene SubtypePublic source
ENSG00000269352ENST00000599259PTOV1-AS2ENSG00000165288BRWD321.9892.1934Q6RI45EpiNA
ENSG00000269352ENST00000599259PTOV1-AS2ENSG00000005339CREBBP21.3992.1577Q92793EpiChIP-seq
ENSG00000269352ENST00000599259PTOV1-AS2ENSG00000100393EP30021.3591.579Q09472EpiChIP-seq
ENSG00000269352ENST00000599259PTOV1-AS2ENSG00000183495EP40015.594.1609Q96L91EpiNA
ENSG00000269352ENST00000593654PTOV1-AS2ENSG00000118058KMT2A20.4495.0771Q03164TF,EpiNA
ENSG00000269352ENST00000593654PTOV1-AS2ENSG00000141867BRD419.5693.0327O60885EpiChIP-seq
ENSG00000269352ENST00000593654PTOV1-AS2ENSG00000185658BRWD117.693.5218Q9NSI6EpiNA
ENSG00000269352ENST00000593654PTOV1-AS2ENSG00000124177CHD616.3192.2647Q8TD26EpiNA
ENSG00000269352ENST00000593654PTOV1-AS2ENSG00000131149GSE114.7993.9861Q14687EpiNA
ENSG00000269352ENST00000593654PTOV1-AS2ENSG00000171634BPTF14.1894.6789Q12830TF,EpiNA
ENSG00000269352ENST00000593654PTOV1-AS2ENSG00000167548KMT2D12.6192.8329O14686EpiNA
ENSG00000269352ENST00000593654PTOV1-AS2ENSG00000166987MBD612.5890.1907Q96DN6TF,EpiNA
ENSG00000269352ENST00000593654PTOV1-AS2ENSG00000272333KMT2B10.7492.2168Q9UMN6TF,EpiNA
ENSG00000269352ENST00000593654PTOV1-AS2ENSG00000165288BRWD317.6593.3636Q6RI45EpiNA
ENSG00000269352ENST00000593654PTOV1-AS2ENSG00000055609KMT2C17.2992.6846Q8NEZ4EpiNA
ENSG00000269352ENST00000593654PTOV1-AS2ENSG00000100393EP30017.1590.7693Q09472EpiChIP-seq
ENSG00000269352ENST00000593654PTOV1-AS2ENSG00000183495EP40011.8293.1586Q96L91EpiNA
ENSG00000269352ENST00000599259PTOV1-AS2ENSG00000118058KMT2A26.195.0585Q03164TF,EpiNA
ENSG00000269352ENST00000599259PTOV1-AS2ENSG00000185658BRWD122.2293.3979Q9NSI6EpiNA
ENSG00000269352ENST00000599259PTOV1-AS2ENSG00000131149GSE118.6494.7654Q14687EpiNA
ENSG00000269352ENST00000599259PTOV1-AS2ENSG00000139613SMARCC218.1390.5452Q8TAQ2EpiChIP-seq

check buttonlncRNA-transcript factor interaction (#cancer types with positive correlation >= 5).
TF result
LncRNA Ensembl IDLncRNA ENST IDLncRNA NameProtein Ensembl IDProtein NameCatRAPID ScoreLncpro ScoreUniPortIDGene SubtypePublic source
ENSG00000269352ENST00000593654PTOV1-AS2ENSG00000118058KMT2A20.4495.1074Q03164TF,EpiNA
ENSG00000269352ENST00000593654PTOV1-AS2ENSG00000171634BPTF14.1894.681Q12830TF,EpiNA
ENSG00000269352ENST00000593654PTOV1-AS2ENSG00000166987MBD612.5890.4007Q96DN6TF,EpiNA
ENSG00000269352ENST00000593654PTOV1-AS2ENSG00000117000RLF11.9192.6348Q13129TFNA
ENSG00000269352ENST00000593654PTOV1-AS2ENSG00000272333KMT2B10.7492.051Q9UMN6TF,EpiNA
ENSG00000269352ENST00000599259PTOV1-AS2ENSG00000118058KMT2A26.195.1186Q03164TF,EpiNA
ENSG00000269352ENST00000599259PTOV1-AS2ENSG00000117000RLF15.194.1444Q13129TFNA

check buttonlncRNA-RNA binding protein interaction (#cancer types with positive correlation >= 5).
RBP result
LncRNA Ensembl IDLncRNA ENST IDLncRNA NameProtein Ensembl IDProtein NameCatRAPID ScoreLncpro ScoreUniPortIDGene SubtypePublic source
ENSG00000269352ENST00000599259PTOV1-AS2ENSG00000148840PPRC115.5491.5809Q5VV67RBPNA
ENSG00000269352ENST00000593654PTOV1-AS2ENSG00000213079SCAF818.1292.7993Q9UPN6RBPNA
ENSG00000269352ENST00000593654PTOV1-AS2ENSG00000148840PPRC112.6991.2741Q5VV67RBPNA
ENSG00000269352ENST00000593654PTOV1-AS2ENSG00000111605CPSF611.4590.5939Q16630RBPPAR-CLIP
ENSG00000269352ENST00000593654PTOV1-AS2ENSG00000156304SCAF49.9391.5245O95104RBPNA
ENSG00000269352ENST00000593654PTOV1-AS2ENSG00000149532CPSF76.2790.602Q8N684RBPPAR-CLIP

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lncRNA-DNA interaction for PTOV1-AS2

lncrna_DNA
check buttonlncRNA targets the enhancer region and positively regulates the gene expression.

check buttonlncRNA targets the promoter region and positively regulates the gene expression.

check buttonlncRNA targets the promoter region and negatively regulates the gene expression.

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lncRNA-RNA interaction for PTOV1-AS2

lncrna_RNA
check buttonlncRNA targets the 3'UTR region and negatively regulates the mRNA.
Only predicted by lncTar
MCTS1,MICU1,MRPL37,GNS,ATP6V1D,ATP6V0D1,DDT,HSPA8,GET3,SNX12,HEXB,GSTZ1,DAD1,NTMT1,TMBIM1,EMC3,ATP6V0E1,GSTO1,LRP10,LAMP1,PCCB,PRDX1,BTD,PLEKHB2,ATP5MC3,SARS1,ZNF622,ABHD5,RTCB,ST13,PSMD1,ECHS1,PEX19
Exist in public source
NA

check buttonlncRNA targets the skipped exon region.
-lncRNA and exonskipping events are positively correlated.
lncRNA and exonskipping events positive correlated
LncRNA Ensembl IDLncRNA ENST IDExon IDSkipped ExondGndGGene name with skipped exonTransID with skipped exonORF mutation
ENSG00000269352ENST00000599259exon_skip_386274chr3:108049618-108049651-3.60-0.1895CD47ENST00000361309In-frame
ENSG00000269352ENST00000599259exon_skip_1234chr1:11658532-11658628-16.34-0.2867FBXO44ENST00000251547,ENST00000376770In-frame

-lncRNA and exonskipping events are negatively correlated.
lncRNA and exonskipping events negative correlated
LncRNA Ensembl IDLncRNA ENST IDExon IDSkipped ExondGndGGene name with skipped exonTransID with skipped exonLOF
ENSG00000269352ENST00000599259exon_skip_284037chr17:79083481-79083590-19.39-0.1979ENGASEENST00000579016Frame-shift
ENSG00000269352ENST00000599259exon_skip_4796chr1:41007448-41007545-17.34-0.2890CTPS1ENST00000372616,ENST00000372621Frame-shift
ENSG00000269352ENST00000599259exon_skip_38175chr1:234398381-234398553-18.33-0.1328TARBP1ENST00000040877Frame-shift
ENSG00000269352ENST00000599259exon_skip_66482chr11:126274926-126275021-15.50-0.1845FOXRED1ENST00000263578Frame-shift
ENSG00000269352ENST00000599259exon_skip_111863chr14:23565815-23565892-13.25-0.2246AP1G2ENST00000308724,ENST00000397120Frame-shift
ENSG00000269352ENST00000599259exon_skip_114365chr14:74290026-74290118-13.19-0.1609ABCD4ENST00000356924Frame-shift
ENSG00000269352ENST00000599259exon_skip_290158chr17:42953723-42953778-7.18-0.1465AARSD1ENST00000427569Frame-shift
ENSG00000269352ENST00000599259exon_skip_327433chr2:86125794-86125880-11.42-0.2538PTCD3ENST00000254630Frame-shift
ENSG00000269352ENST00000599259exon_skip_370518chr22:50247691-50247776-18.26-0.2945HDAC10ENST00000216271Frame-shift
ENSG00000269352ENST00000599259exon_skip_377198chr3:123130479-123130616-18.65-0.1680PDIA5ENST00000316218Frame-shift
ENSG00000269352ENST00000599259exon_skip_382458chr3:38131595-38131638-9.59-0.2997ACAA1ENST00000333167Frame-shift
ENSG00000269352ENST00000599259exon_skip_384420chr3:49812647-49812738-16.65-0.2413UBA7ENST00000333486Frame-shift
ENSG00000269352ENST00000599259exon_skip_499567chr9:128325142-128325239-16.34-0.2476COQ4ENST00000300452Frame-shift
ENSG00000269352ENST00000599259exon_skip_41813chr10:68337857-68337996-16.36-0.1435HNRNPH3ENST00000265866Frame-shift
ENSG00000269352ENST00000599259exon_skip_95407chr12:95040475-95040597-13.46-0.1150NR2C1ENST00000333003Frame-shift
ENSG00000269352ENST00000599259exon_skip_110959chr14:20372732-20372857-15.64-0.1314TEP1ENST00000262715Frame-shift
ENSG00000269352ENST00000599259exon_skip_133217chr16:8635038-8635079-12.25-0.4083METTL22ENST00000381920Frame-shift
ENSG00000269352ENST00000599259exon_skip_309204chr19:49181348-49181461-19.95-0.1956TRPM4ENST00000252826Frame-shift
ENSG00000269352ENST00000599259exon_skip_340759chr2:85552415-85552567-16.92-0.1446GGCXENST00000233838Frame-shift
ENSG00000269352ENST00000599259exon_skip_380242chr3:186784961-186785101-14.60-0.1339EIF4A2ENST00000323963Frame-shift
ENSG00000269352ENST00000599259exon_skip_387016chr3:121788283-121788432-11.81-0.1094IQCB1ENST00000310864Frame-shift
ENSG00000269352ENST00000599259exon_skip_442657chr5:74730259-74730398-14.80-0.1096GFM2ENST00000296805,ENST00000509430Frame-shift
ENSG00000269352ENST00000599259exon_skip_2106chr1:17648553-17648675-24.04-0.2090ARHGEF10LENST00000361221Frame-shift
ENSG00000269352ENST00000599259exon_skip_9446chr1:147270931-147271005-10.14-0.1988CHD1LENST00000369258Frame-shift
ENSG00000269352ENST00000599259exon_skip_23423chr1:26294204-26294331-15.42-0.1254UBXN11ENST00000374221,ENST00000374222Frame-shift
ENSG00000269352ENST00000599259exon_skip_41841chr10:68756272-68756483-20.28-0.1056CCAR1ENST00000265872Frame-shift
ENSG00000269352ENST00000599259exon_skip_52701chr10:97468965-97469104-20.70-0.2250MMS19ENST00000370782,ENST00000438925Frame-shift
ENSG00000269352ENST00000599259exon_skip_53559chr10:101793912-101793998-11.40-0.1462OGAENST00000361464Frame-shift
ENSG00000269352ENST00000599259exon_skip_58412chr11:43892040-43892129-9.38-0.1400ALKBH3ENST00000302708Frame-shift
ENSG00000269352ENST00000599259exon_skip_62623chr11:69079833-69079883-12.13-0.4332TPCN2ENST00000294309Frame-shift
ENSG00000269352ENST00000599259exon_skip_74009chr11:64773429-64773505-18.35-0.2585SF1ENST00000377390Frame-shift
ENSG00000269352ENST00000599259exon_skip_87733chr12:120571190-120571291-11.99-0.1276RNF10ENST00000325954Frame-shift
ENSG00000269352ENST00000599259exon_skip_92074chr12:50142052-50142110-7.05-0.4406CERS5ENST00000317551Frame-shift
ENSG00000269352ENST00000599259exon_skip_108095chr14:73955450-73955509-10.07-0.2398COQ6ENST00000334571Frame-shift
ENSG00000269352ENST00000599259exon_skip_111870chr14:23566561-23566686-18.71-0.1834AP1G2ENST00000397120Frame-shift
ENSG00000269352ENST00000599259exon_skip_114376chr14:74293153-74293248-15.07-0.2123ABCD4ENST00000356924Frame-shift
ENSG00000269352ENST00000599259exon_skip_127618chr15:58890280-58890461-17.02-0.1025SLTMENST00000380516Frame-shift
ENSG00000269352ENST00000599259exon_skip_128982chr15:72250844-72250954-20.15-0.2190PARP6ENST00000287196,ENST00000569795Frame-shift
ENSG00000269352ENST00000599259exon_skip_138351chr16:70469151-70469323-20.37-0.1643FUKENST00000288078Frame-shift
ENSG00000269352ENST00000599259exon_skip_139933chr16:90035632-90035687-11.79-0.2183GAS8ENST00000268699Frame-shift
ENSG00000269352ENST00000599259exon_skip_285958chr17:5404098-5404246-19.05-0.1524NUP88ENST00000573584Frame-shift
ENSG00000269352ENST00000599259exon_skip_292904chr17:69251746-69251866-14.41-0.1298ABCA5ENST00000392676,ENST00000588877In-frame
ENSG00000269352ENST00000599259exon_skip_296625chr18:42057882-42058051-20.03-0.1727PIK3C3ENST00000262039Frame-shift
ENSG00000269352ENST00000599259exon_skip_300663chr19:1425877-1425960-9.38-0.2181DAZAP1ENST00000233078Frame-shift
ENSG00000269352ENST00000599259exon_skip_302168chr19:10680345-10680443-12.21-0.1607ILF3ENST00000590261Frame-shift
ENSG00000269352ENST00000599259exon_skip_313557chr19:5786748-5786845-18.71-0.2201DUS3LENST00000309061Frame-shift
ENSG00000269352ENST00000599259exon_skip_326885chr2:74490024-74490127-20.23-0.2734TTC31ENST00000233623Frame-shift
ENSG00000269352ENST00000599259exon_skip_327748chr2:95410863-95411026-23.00-0.1513FAHD2AENST00000233379,ENST00000447036Frame-shift
ENSG00000269352ENST00000599259exon_skip_333962chr2:219247112-219247246-16.33-0.1247STK16ENST00000396738,ENST00000409638Frame-shift
ENSG00000269352ENST00000599259exon_skip_335558chr2:240596680-240596942-38.40-0.1524CAPN10ENST00000391984Frame-shift
ENSG00000269352ENST00000599259exon_skip_353131chr20:58669290-58669453-26.40-0.1913STX16ENST00000371141Frame-shift
ENSG00000269352ENST00000599259exon_skip_361485chr21:29008239-29008307-11.45-0.2290RWDD2BENST00000493196Frame-shift
ENSG00000269352ENST00000599259exon_skip_365497chr22:38067703-38067770-12.50-0.3676PICK1ENST00000356976,ENST00000404072Frame-shift
ENSG00000269352ENST00000599259exon_skip_370700chr22:50314399-50314494-15.33-0.2159DENND6BENST00000413817Frame-shift
ENSG00000269352ENST00000599259exon_skip_374497chr3:49999439-49999513-11.70-0.2388RBM6ENST00000266022Frame-shift
ENSG00000269352ENST00000599259exon_skip_374551chr3:50100531-50100605-11.49-0.2128RBM5ENST00000347869Frame-shift
ENSG00000269352ENST00000599259exon_skip_436035chr5:79656957-79657001-8.00-0.2051TENT2ENST00000296783,ENST00000428308,ENST00000453514Frame-shift
ENSG00000269352ENST00000599259exon_skip_438188chr5:141638954-141639021-12.34-0.2057RELL2ENST00000297164,ENST00000444782Frame-shift
ENSG00000269352ENST00000599259exon_skip_444499chr5:138164086-138164133-7.51-0.1598BRD8ENST00000254900Frame-shift
ENSG00000269352ENST00000599259exon_skip_446758chr5:178212972-178213103-17.38-0.1889PHYKPLENST00000308158Frame-shift
ENSG00000269352ENST00000599259exon_skip_470226chr7:103307595-103307708-11.05-0.1625PMPCBENST00000249269Frame-shift
ENSG00000269352ENST00000599259exon_skip_509943chrX:47175018-47175092-13.32-0.1903RBM10ENST00000377604Frame-shift
ENSG00000269352ENST00000599259exon_skip_511212chrX:71555189-71555385-18.29-0.1033OGTENST00000373719Frame-shift
ENSG00000269352ENST00000599259exon_skip_11029chr1:154989559-154989707-20.02-0.1820FLAD1ENST00000292180Frame-shift
ENSG00000269352ENST00000599259exon_skip_13857chr1:168038370-168038488-12.76-0.2239DCAF6ENST00000312263Frame-shift
ENSG00000269352ENST00000599259exon_skip_59071chr11:47234756-47234934-17.95-0.1088DDB2ENST00000256996Frame-shift
ENSG00000269352ENST00000599259exon_skip_141595chr16:4801266-4801321-11.79-0.2406ROGDIENST00000322048Frame-shift
ENSG00000269352ENST00000599259exon_skip_374581chr3:50110378-50110463-11.23-0.2389RBM5ENST00000347869Frame-shift
ENSG00000269352ENST00000599259exon_skip_77641chr11:117207066-117207160-14.61-0.1642PCSK7ENST00000320934Frame-shift
ENSG00000269352ENST00000599259exon_skip_297696chr18:677742-677872-14.62-0.1700ENOSF1ENST00000251101Frame-shift
ENSG00000269352ENST00000599259exon_skip_357254chr20:44622587-44622652-16.10-0.3578ADAENST00000372874Frame-shift
ENSG00000269352ENST00000599259exon_skip_374552chr3:50104247-50104308-10.19-0.1960RBM5ENST00000347869Frame-shift
ENSG00000269352ENST00000599259exon_skip_52671chr10:97461495-97461622-22.48-0.1873MMS19ENST00000370782,ENST00000438925Frame-shift

check buttonlncRNA targets by miRNA.
LncRNA Ensembl IDmiRNA IDLncRNA ENST IDBinding site in lncRNAScoreEnergyAlign LenPublic source

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Variants for PTOV1-AS2

check buttonRNA A-to-I editing events in lncRNA.
LncRNAediting IDLncRNA Ensembl IDChromosomeEditing PositionStrandGene TypeGene NameTranscript IDTranscript TypeTranscript Name

check buttonEdited-associated DElncRNAs in cancer.
LncRNA Ensembl IDLncRNA IndexCancer TypeChr_Postion_StrandAVE1AVE2log2FCW-valueP-valueAdjc.p-valueChange

check buttonCorrelation between RNA A-to-I editing events's frequecy and lncRNA expression.
LncRNA Ensembl IDLncRNA IndexCorrelationP-valueAdjc.p-value

check buttonCis-expression quantitative trait loci(cis-eQTL) of lncRNA.
LncRNA Ensembl IDLncRNA NameSNP infoNumber of Positive corelated CancerPositive corelated CancerNumber of Negative corelated CancerNegative corelated Cancer

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lncRNAs regulate the target genes through functioning as enhancers

lncrna_enhancer
check buttonlncRNA regulates differentially expressed genes by function as enhancer.
LncRNA Ensembl IDPC Gene IDPC Gene NamePositive correlated cancersCancer with PC gene up-regulationCancer with PC gene down-regulation

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lncRNAs regulate the target genes through recruiting transcript factors

lncrna_TF
check buttonLncRNA-TF complex positively regulates the gene expression by target promoter region (#cancer types with positive correlation >= 5).
lncRNA IDTF IDTF NamePCgene IDPCgene NameNumber of CancerCanaer Types

check buttonLncRNA-TF complex negatively regulates the gene expression by target promoter region (#cancer types with negative correlation >= 5).
lncRNA IDTF IDTF NamePCgene IDPCgene NameNumber of CancerCanaer Types

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lncRNAs regulate the alternative splicing event through interacting with splicing factor

lncrna_AS
check buttonLncRNA-RBP complex positively regulates the exon skippping events by target skipped eoxon region.
LncRNA Ensembl IDRBP IDRBP Gene NameExon Skipping IDSkipped ExonEX Gene NameEX Affected TransIDORF_annoCancer Type

check buttonLncRNA-RBP complex negatively regulates the exon skippping events by target skipped eoxon region.
LncRNA-RBP complex negative regulation
LncRNA Ensembl IDRBP IDRBP Gene NameExon Skipping IDSkipped ExonEX Gene NameEX Affected TransIDORF_annoCancer Type
ENSG00000269352ENSG00000111605CPSF6exon_skip_382458ENSG00000060971:chr3:38131595-38131638ACAA1ENST00000333167Frame-shiftSTAD,UVM,SKCM,LIHC,OV

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lncRNAs regulate mRNA through targeting the 3'-UTR region

lncrna_mRNA
check buttonlncRNA regulates differential expressed mRNA by directly targeting 3' UTR region.
LncRNA Ensembl IDLncRNA ENST IDPC Gene NamePC Gene IDPC ENST IDdGnDGCancer with PC gene up-regulationCancer with PC gene Down-regulation
ENSG00000269352ENST00000593654GSTZ1ENSG00000100577ENST00000216465-0.10271-LIHC
ENSG00000269352ENST00000593654GSTZ1ENSG00000100577ENST00000554279-0.4860558-LIHC
ENSG00000269352ENST00000593654GSTZ1ENSG00000100577ENST00000557639-0.1688277-LIHC
ENSG00000269352ENST00000593654GSTZ1ENSG00000100577ENST00000349555-0.1213129-LIHC
ENSG00000269352ENST00000593654GSTZ1ENSG00000100577ENST00000556627-0.1463184-LIHC
ENSG00000269352ENST00000593654GSTZ1ENSG00000100577ENST00000557053-0.4271559-LIHC
ENSG00000269352ENST00000593654GSTZ1ENSG00000100577ENST00000393734-0.10271-LIHC
ENSG00000269352ENST00000593654GSTZ1ENSG00000100577ENST00000553586-0.1144113-LIHC
ENSG00000269352ENST00000593654ECHS1ENSG00000127884ENST00000368547-0.1091123-KIRC,LIHC
ENSG00000269352ENST00000601893GSTZ1ENSG00000100577ENST00000216465-0.1072237-LIHC
ENSG00000269352ENST00000601893GSTZ1ENSG00000100577ENST00000554279-0.5379119-LIHC
ENSG00000269352ENST00000601893GSTZ1ENSG00000100577ENST00000557639-0.1395266-LIHC
ENSG00000269352ENST00000601893GSTZ1ENSG00000100577ENST00000349555-0.1436527-LIHC
ENSG00000269352ENST00000601893GSTZ1ENSG00000100577ENST00000556627-0.1447530-LIHC
ENSG00000269352ENST00000601893GSTZ1ENSG00000100577ENST00000557053-0.9217280-LIHC
ENSG00000269352ENST00000601893GSTZ1ENSG00000100577ENST00000393734-0.1072238-LIHC
ENSG00000269352ENST00000601893GSTZ1ENSG00000100577ENST00000553586-0.1241459-LIHC
ENSG00000269352ENST00000601893ECHS1ENSG00000127884ENST00000368547-0.1640469-KIRC,LIHC
ENSG00000269352ENST00000599259GSTZ1ENSG00000100577ENST00000216465-0.12051-LIHC
ENSG00000269352ENST00000599259GSTZ1ENSG00000100577ENST00000554279-0.6019255-LIHC
ENSG00000269352ENST00000599259GSTZ1ENSG00000100577ENST00000557639-0.1984255-LIHC
ENSG00000269352ENST00000599259GSTZ1ENSG00000100577ENST00000349555-0.11705-LIHC
ENSG00000269352ENST00000599259GSTZ1ENSG00000100577ENST00000556627-0.146329-LIHC
ENSG00000269352ENST00000599259GSTZ1ENSG00000100577ENST00000557053-1.6060255-LIHC
ENSG00000269352ENST00000599259GSTZ1ENSG00000100577ENST00000393734-0.12051-LIHC
ENSG00000269352ENST00000599259GSTZ1ENSG00000100577ENST00000553586-0.1395255-LIHC
ENSG00000269352ENST00000599259PCCBENSG00000114054ENST00000251654-0.24311-KIRC
ENSG00000269352ENST00000599259PCCBENSG00000114054ENST00000490504-0.24311-KIRC
ENSG00000269352ENST00000599259PCCBENSG00000114054ENST00000483687-0.24311-KIRC
ENSG00000269352ENST00000599259PCCBENSG00000114054ENST00000468777-0.24311-KIRC
ENSG00000269352ENST00000599259PCCBENSG00000114054ENST00000462637-0.24311-KIRC
ENSG00000269352ENST00000599259PCCBENSG00000114054ENST00000466072-0.24311-KIRC
ENSG00000269352ENST00000599259PCCBENSG00000114054ENST00000482086-0.24311-KIRC
ENSG00000269352ENST00000599259PCCBENSG00000114054ENST00000469217-0.24311-KIRC
ENSG00000269352ENST00000599259ECHS1ENSG00000127884ENST00000368547-0.12311-KIRC,LIHC

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lncRNAs regulate mRNA by competing with miRNA

lncrna_miRNA
check buttonlncRNA regulates mRNA by competing the miRNA binding site with mRNA.
LncRNA Ensembl IDlncRNA-miRNA-mRNACancer Types

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lncRNA coding potential

check buttonORFfinder result for the gencode.v22.lncRNA.transcript.fa.
lncRNA Ensembl IDlncRNA ENST IDlength(AA)start at transcriptend at transcript
ENSG00000269352.1ENST00000593654.1692071
ENSG00000269352.1ENST00000601893.178361594
ENSG00000269352.1ENST00000599259.1119360716