|
||||||
|
lncRNA: ENSG00000268307 |
Summary for LINC02560 |
 Gene summary |
| Gene information | Ensembl ID | ENSG00000268307 | Gene symbol | LINC02560 |
| Gene name | long intergenic non-protein coding RNA 2560 | |
| HGNC | 53600 | |
| Entrez ID | 110806301 | |
| Gene type | lincRNA | |
| Synonyms | 19q13.43|CTD-2619J13.13|LINC02560 | |
| UniProtAcc |
Top |
Structure and expression level for LINC02560 |
| Differentially expressed gene analysis between cancer and normal samples. |
 |
| Ensembl ID | Base mean | log2FC(AD/control) | lfcSE | Stat | P-value | Adjc.p-value | DEG direction | Cancer type |
| ENSG00000268307 | 1.520378e+02 | 3.894449e+00 | 2.153576e-01 | 1.808364e+01 | 4.290000e-73 | 1.050000e-70 | UP | THCA |
| ENSG00000268307 | 1.328321e+02 | 6.534646e+00 | 1.200964e+00 | 5.441168e+00 | 5.290000e-08 | 1.930000e-06 | UP | CESC |
| ENSG00000268307 | 2.317885e+02 | -1.792727e+00 | 2.629202e-01 | -6.818522e+00 | 9.200000e-12 | 8.150000e-11 | DOWN | HNSC |
| ENSG00000268307 | 5.503438e+01 | 2.409728e+00 | 2.167536e-01 | 1.111737e+01 | 1.030000e-28 | 1.040000e-27 | UP | LUSC |
| ENSG00000268307 | 5.115863e+01 | 1.319865e+00 | 1.865056e-01 | 7.076813e+00 | 1.480000e-12 | 6.480000e-12 | UP | BRCA |
| ENSG00000268307 | 6.667035e+01 | 2.952461e+00 | 2.514748e-01 | 1.174059e+01 | 7.890000e-32 | 1.720000e-30 | UP | LUAD |
| Correlation between lncRNAs and cancer stages. |
| LncRNA Ensembl ID | Correlation | P-value | Cancer Type | Adjc.p-value |
| ENSG00000268307 | 3.454678e-01 | 2.612349e-17 | THCA | 1.153788e-15 |
Top |
lncRNA-Protein interaction for LINC02560 |
 |
| lncRNA-epigenetic factor interaction (#cancer types with positive correlation >= 5). |
| LncRNA Ensembl ID | LncRNA ENST ID | LncRNA Name | Protein Ensembl ID | Protein Name | CatRAPID Score | Lncpro Score | UniPortID | Gene Subtype | Public source |
| lncRNA-transcript factor interaction (#cancer types with positive correlation >= 5). |
| LncRNA Ensembl ID | LncRNA ENST ID | LncRNA Name | Protein Ensembl ID | Protein Name | CatRAPID Score | Lncpro Score | UniPortID | Gene Subtype | Public source |
| lncRNA-RNA binding protein interaction (#cancer types with positive correlation >= 5). |
| LncRNA Ensembl ID | LncRNA ENST ID | LncRNA Name | Protein Ensembl ID | Protein Name | CatRAPID Score | Lncpro Score | UniPortID | Gene Subtype | Public source |
Top |
|
