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lncRNA: ENSG00000267745 |
Summary for RP11-686D22.8 |
Gene summary |
Gene information | Ensembl ID | ENSG00000267745 | Gene symbol | RP11-686D22.8 |
Gene name | ||
HGNC | ||
Entrez ID | ||
Gene type | processed_transcript | |
Synonyms | ||
UniProtAcc |
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Structure and expression level for RP11-686D22.8 |
AS events and RNA A-to-I editing events of lncRNA in TCGA based on Genvode V22 structure. |
Differentially expressed gene analysis between cancer and normal samples. |
Ensembl ID | Base mean | log2FC(AD/control) | lfcSE | Stat | P-value | Adjc.p-value | DEG direction | Cancer type |
ENSG00000267745 | 5.753938e+01 | 1.886133e+00 | 4.068011e-01 | 4.636499e+00 | 3.540000e-06 | 2.100000e-05 | UP | CHOL |
Correlation between lncRNAs and cancer stages. |
LncRNA Ensembl ID | Correlation | P-value | Cancer Type | Adjc.p-value |
ENSG00000267745 | 3.935616e-01 | 7.479816e-03 | CHOL | 9.129935e-03 |
ENSG00000267745 | 3.105045e-01 | 4.687029e-15 | KIRC | 1.935012e-14 |
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lncRNA-Protein interaction for RP11-686D22.8 |
lncRNA-epigenetic factor interaction (#cancer types with positive correlation >= 5). |
LncRNA Ensembl ID | LncRNA ENST ID | LncRNA Name | Protein Ensembl ID | Protein Name | CatRAPID Score | Lncpro Score | UniPortID | Gene Subtype | Public source |
ENSG00000267745 | ENST00000587012 | RP11-686D22.8 | ENSG00000146247 | PHIP | 86.53 | 90.4746 | Q8WWQ0 | Epi | NA |
ENSG00000267745 | ENST00000587012 | RP11-686D22.8 | ENSG00000185658 | BRWD1 | 74.32 | 94.0712 | Q9NSI6 | Epi | NA |
ENSG00000267745 | ENST00000587012 | RP11-686D22.8 | ENSG00000123636 | BAZ2B | 102.47 | 90.0864 | Q9UIF8 | TF,Epi | NA |
ENSG00000267745 | ENST00000587012 | RP11-686D22.8 | ENSG00000054267 | ARID4B | 84.15 | 90.9123 | Q4LE39 | Epi | NA |
ENSG00000267745 | ENST00000587012 | RP11-686D22.8 | ENSG00000164190 | NIPBL | 69.12 | 93.4942 | Q6KC79 | Epi | NA |
ENSG00000267745 | ENST00000587012 | RP11-686D22.8 | ENSG00000168769 | TET2 | 58.88 | 91.8076 | Q6N021 | TF,Epi | NA |
lncRNA-transcript factor interaction (#cancer types with positive correlation >= 5). |
LncRNA Ensembl ID | LncRNA ENST ID | LncRNA Name | Protein Ensembl ID | Protein Name | CatRAPID Score | Lncpro Score | UniPortID | Gene Subtype | Public source |
ENSG00000267745 | ENST00000587012 | RP11-686D22.8 | ENSG00000123636 | BAZ2B | 102.47 | 90.1533 | Q9UIF8 | TF,Epi | NA |
ENSG00000267745 | ENST00000587012 | RP11-686D22.8 | ENSG00000168769 | TET2 | 58.88 | 91.9371 | Q6N021 | TF,Epi | NA |
lncRNA-RNA binding protein interaction (#cancer types with positive correlation >= 5). |
LncRNA Ensembl ID | LncRNA ENST ID | LncRNA Name | Protein Ensembl ID | Protein Name | CatRAPID Score | Lncpro Score | UniPortID | Gene Subtype | Public source |
ENSG00000267745 | ENST00000587012 | RP11-686D22.8 | ENSG00000137628 | DDX60 | 92.81 | 90.9851 | Q8IY21 | RBP | NA |
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