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lncRNA: ENSG00000267505 |
Summary for CTC-296K1.3 |
Gene summary |
Gene information | Ensembl ID | ENSG00000267505 | Gene symbol | CTC-296K1.3 |
Gene name | ||
HGNC | ||
Entrez ID | ||
Gene type | lincRNA | |
Synonyms | ||
UniProtAcc |
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Structure and expression level for CTC-296K1.3 |
AS events and RNA A-to-I editing events of lncRNA in TCGA based on Genvode V22 structure. |
Differentially expressed gene analysis between cancer and normal samples. |
Ensembl ID | Base mean | log2FC(AD/control) | lfcSE | Stat | P-value | Adjc.p-value | DEG direction | Cancer type |
ENSG00000267505 | 8.003265e+01 | -5.025044e+00 | 5.382219e-01 | -9.336380e+00 | 9.970000e-21 | 1.380000e-18 | DOWN | BLCA |
ENSG00000267505 | 2.205303e+02 | -2.043579e+00 | 1.829213e-01 | -1.117190e+01 | 5.600000e-29 | 4.420000e-27 | DOWN | PRAD |
Correlation between lncRNAs and cancer stages. |
LncRNA Ensembl ID | Correlation | P-value | Cancer Type | Adjc.p-value |
ENSG00000267505 | -4.010623e-01 | 1.043643e-22 | PRAD | 6.832383e-21 |
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lncRNA-Protein interaction for CTC-296K1.3 |
lncRNA-epigenetic factor interaction (#cancer types with positive correlation >= 5). |
LncRNA Ensembl ID | LncRNA ENST ID | LncRNA Name | Protein Ensembl ID | Protein Name | CatRAPID Score | Lncpro Score | UniPortID | Gene Subtype | Public source |
lncRNA-transcript factor interaction (#cancer types with positive correlation >= 5). |
LncRNA Ensembl ID | LncRNA ENST ID | LncRNA Name | Protein Ensembl ID | Protein Name | CatRAPID Score | Lncpro Score | UniPortID | Gene Subtype | Public source |
lncRNA-RNA binding protein interaction (#cancer types with positive correlation >= 5). |
LncRNA Ensembl ID | LncRNA ENST ID | LncRNA Name | Protein Ensembl ID | Protein Name | CatRAPID Score | Lncpro Score | UniPortID | Gene Subtype | Public source |
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