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lncRNA: ENSG00000265519

Summary for CTD-3157E16.1

Gene summary

Gene information	Ensembl ID	ENSG00000265519
	Gene symbol	CTD-3157E16.1
	Gene name
	HGNC
	Entrez ID
	Gene type	lincRNA
	Synonyms
	UniProtAcc

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Structure and expression level for CTD-3157E16.1

Differentially expressed gene analysis between cancer and normal samples.

Ensembl ID	Base mean	log2FC(AD/control)	lfcSE	Stat	P-value	Adjc.p-value	DEG direction	Cancer type
ENSG00000265519	1.417972e+02	-1.107572e+00	1.043853e-01	-1.061042e+01	2.670000e-26	2.260000e-25	DOWN	KIRC
ENSG00000265519	9.809040e+01	-1.166480e+00	2.481630e-01	-4.700460e+00	2.600000e-06	2.090000e-05	DOWN	BLCA
ENSG00000265519	4.265285e+01	-1.413320e+00	2.297755e-01	-6.150874e+00	7.710000e-10	5.420000e-09	DOWN	HNSC
ENSG00000265519	4.345383e+01	-1.392698e+00	1.778523e-01	-7.830646e+00	4.850000e-15	5.120000e-14	DOWN	UCEC
ENSG00000265519	9.702387e+01	-1.345059e+00	1.333639e-01	-1.008563e+01	6.400000e-24	2.750000e-22	DOWN	PRAD
ENSG00000265519	9.561587e+01	-1.344380e+00	1.449388e-01	-9.275499e+00	1.770000e-20	1.180000e-19	DOWN	LUSC
ENSG00000265519	3.331335e+01	-1.872810e+00	2.052538e-01	-9.124363e+00	7.220000e-20	9.570000e-19	DOWN	COAD
ENSG00000265519	3.149669e+01	-1.750473e+00	3.682755e-01	-4.753163e+00	2.000000e-06	2.350000e-05	DOWN	READ

Correlation between lncRNAs and cancer stages.

LncRNA Ensembl ID	Correlation	P-value	Cancer Type	Adjc.p-value
ENSG00000265519	-4.908367e-01	1.042936e-06	KICH	2.918771e-06
ENSG00000265519	-4.120885e-01	2.522271e-26	KIRC	5.833770e-25
ENSG00000265519	-4.078534e-01	1.692111e-23	PRAD	1.846282e-21
ENSG00000265519	-3.405905e-01	2.077294e-17	UCEC	4.048060e-16

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lncRNA-Protein interaction for CTD-3157E16.1

lncRNA-epigenetic factor interaction (#cancer types with positive correlation >= 5).

LncRNA Ensembl ID	LncRNA ENST ID	LncRNA Name	Protein Ensembl ID	Protein Name	CatRAPID Score	Lncpro Score	UniPortID	Gene Subtype	Public source
ENSG00000265519	ENST00000582780	CTD-3157E16.1	ENSG00000118058	KMT2A	63.81	95.6147	Q03164	TF,Epi	NA
ENSG00000265519	ENST00000582780	CTD-3157E16.1	ENSG00000187605	TET3	56.87	93.4056	O43151	TF,Epi	NA
ENSG00000265519	ENST00000582780	CTD-3157E16.1	ENSG00000171634	BPTF	55.21	96.4792	Q12830	TF,Epi	NA
ENSG00000265519	ENST00000582780	CTD-3157E16.1	ENSG00000134852	CLOCK	48.98	93.4328	O15516	TF,Epi	NA
ENSG00000265519	ENST00000582780	CTD-3157E16.1	ENSG00000182568	SATB1	45.52	90.2139	Q01826	TF,Epi	NA
ENSG00000265519	ENST00000582780	CTD-3157E16.1	ENSG00000089094	KDM2B	44.53	93.7113	Q8NHM5	TF,Epi	NA
ENSG00000265519	ENST00000582780	CTD-3157E16.1	ENSG00000198919	DZIP3	63.98	90.7821	Q86Y13	RBP,Epi	NA
ENSG00000265519	ENST00000582780	CTD-3157E16.1	ENSG00000084676	NCOA1	53.37	90.6708	Q15788	TF,Epi	NA
ENSG00000265519	ENST00000582780	CTD-3157E16.1	ENSG00000165732	DDX21	52.67	91.1131	Q9NR30	RBP,Epi	NA
ENSG00000265519	ENST00000582780	CTD-3157E16.1	ENSG00000076108	BAZ2A	52.62	91.1192	Q9UIF9	TF,RBP,Epi	NA
ENSG00000265519	ENST00000582780	CTD-3157E16.1	ENSG00000189079	ARID2	48.59	92.6361	Q68CP9	TF,Epi	NA
ENSG00000265519	ENST00000582780	CTD-3157E16.1	ENSG00000168769	TET2	46.85	91.9345	Q6N021	TF,Epi	NA

lncRNA-transcript factor interaction (#cancer types with positive correlation >= 5).

LncRNA Ensembl ID	LncRNA ENST ID	LncRNA Name	Protein Ensembl ID	Protein Name	CatRAPID Score	Lncpro Score	UniPortID	Gene Subtype	Public source
ENSG00000265519	ENST00000582780	CTD-3157E16.1	ENSG00000102189	EEA1	78.18	90.6033	Q15075	TF	NA
ENSG00000265519	ENST00000582780	CTD-3157E16.1	ENSG00000100644	HIF1A	64.79	90.0549	Q16665	TF	NA
ENSG00000265519	ENST00000582780	CTD-3157E16.1	ENSG00000118058	KMT2A	63.81	95.374	Q03164	TF,Epi	NA
ENSG00000265519	ENST00000582780	CTD-3157E16.1	ENSG00000178764	ZHX2	57.17	91.0444	Q9Y6X8	TF	NA
ENSG00000265519	ENST00000582780	CTD-3157E16.1	ENSG00000187605	TET3	56.87	92.9769	O43151	TF,Epi	NA
ENSG00000265519	ENST00000582780	CTD-3157E16.1	ENSG00000171634	BPTF	55.21	95.9754	Q12830	TF,Epi	NA
ENSG00000265519	ENST00000582780	CTD-3157E16.1	ENSG00000076108	BAZ2A	52.62	92.0882	Q9UIF9	TF,RBP,Epi	NA
ENSG00000265519	ENST00000582780	CTD-3157E16.1	ENSG00000169554	ZEB2	49.73	94.3059	O60315	TF	NA
ENSG00000265519	ENST00000582780	CTD-3157E16.1	ENSG00000140836	ZFHX3	49.71	93.0901	Q15911	TF	NA
ENSG00000265519	ENST00000582780	CTD-3157E16.1	ENSG00000134852	CLOCK	48.98	93.3724	O15516	TF,Epi	NA
ENSG00000265519	ENST00000582780	CTD-3157E16.1	ENSG00000189079	ARID2	48.59	92.382	Q68CP9	TF,Epi	NA
ENSG00000265519	ENST00000582780	CTD-3157E16.1	ENSG00000168769	TET2	46.85	91.8466	Q6N021	TF,Epi	NA
ENSG00000265519	ENST00000582780	CTD-3157E16.1	ENSG00000148516	ZEB1	44.61	91.5666	P37275	TF	NA
ENSG00000265519	ENST00000582780	CTD-3157E16.1	ENSG00000089094	KDM2B	44.53	92.0287	Q8NHM5	TF,Epi	NA
ENSG00000265519	ENST00000582780	CTD-3157E16.1	ENSG00000106571	GLI3	43.59	94.9042	P10071	TF	NA
ENSG00000265519	ENST00000582780	CTD-3157E16.1	ENSG00000114439	BBX	42.97	91.5113	Q8WY36	TF	NA
ENSG00000265519	ENST00000582780	CTD-3157E16.1	ENSG00000117000	RLF	41.93	94.0252	Q13129	TF	NA
ENSG00000265519	ENST00000582780	CTD-3157E16.1	ENSG00000165821	SALL2	39.61	91.2131	Q9Y467	TF	NA
ENSG00000265519	ENST00000582780	CTD-3157E16.1	ENSG00000116016	EPAS1	39.43	90.4078	Q99814	TF	NA
ENSG00000265519	ENST00000582780	CTD-3157E16.1	ENSG00000103449	SALL1	30.97	92.1419	Q9NSC2	TF	NA
ENSG00000265519	ENST00000582780	CTD-3157E16.1	ENSG00000186660	ZFP91	5.77	91.8373	Q96JP5	TF	NA

lncRNA-RNA binding protein interaction (#cancer types with positive correlation >= 5).

LncRNA Ensembl ID	LncRNA ENST ID	LncRNA Name	Protein Ensembl ID	Protein Name	CatRAPID Score	Lncpro Score	UniPortID	Gene Subtype	Public source
ENSG00000265519	ENST00000582780	CTD-3157E16.1	ENSG00000163510	CWC22	66.06	91.7018	Q9HCG8	RBP	NA
ENSG00000265519	ENST00000582780	CTD-3157E16.1	ENSG00000136937	NCBP1	59.96	92.1171	Q09161	RBP	NA
ENSG00000265519	ENST00000582780	CTD-3157E16.1	ENSG00000125676	THOC2	56.54	93.2685	Q8NI27	RBP	NA
ENSG00000265519	ENST00000582780	CTD-3157E16.1	ENSG00000135870	RC3H1	39.8	90.2108	Q5TC82	RBP	NA
ENSG00000265519	ENST00000582780	CTD-3157E16.1	ENSG00000196943	NOP9	26.66	91.2207	Q86U38	RBP	NA
ENSG00000265519	ENST00000582780	CTD-3157E16.1	ENSG00000174720	LARP7	13.95	92.6649	Q4G0J3	RBP	NA

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lncRNA-DNA interaction for CTD-3157E16.1

lncRNA targets the enhancer region and positively regulates the gene expression.

Only predicted by TDF

CEBPZ,ELF4,PUM1,TBX3,KLF9,XRN1,BCL6,CPEB2,PBX2,KLF12,ZBTB4,GLYR1,GRSF1,KLF7,RBM7,JAZF1,MYSM1,CSDE1,RBM23,ARID2,ZXDC,SUGP2,FOXF2,RARB,DMTF1,ELF1,FOSL2,VEZF1,GLI3,RBM27,ZNF70,BAZ2A,ZNF24,DDX52,RORA,RUNX1,ATF6B,TBP,GABPA,NFKB1,IKZF5,DDX24,MEF2C,GLIS3,ZMAT3,TET3,ZBTB5,SRP68,HEYL,ZFP14,ZXDA,RNPC3,TFE3,TRPS1,KDM5B,NOP9,ATMIN,FOXO1,LARP7,TRNT1,CNOT4,SON,CWC22,DDX59,PBX3,ZZZ3,PNO1,MLX,ZBED3,DDX60,KLF6,STAT3,CREB1,MEX3C,RC3H1,SP100,HIF1A,EEA1,ZNF91,ZFP91,RBMX,AGO2,RBMS3,TIGD6,RBM26,ZFP1,PURB,ADNP,GZF1,NCBP1,MYEF2,PPIL4,MBD1,IKZF4,PUS7L,ASH1L,MEIS1,CLOCK,NFIA,MEIS2,FUBP1,ARNT2,RBM43,FLI1,KLF11,PRDM4,TCF20,LIN54,AGFG1,UBR5,THOC2,ZBTB6,THAP6,RBM47,ERG,DDX17,SRRM2,RFX7,E2F6,FOXN3,SP2,ZHX3,LCOR,FMR1,MECP2,FOXJ3,KLF3,PURA,PHAX,ZNF41,KLF15,TTF1,RBM41,SART3,DZIP3,SRBD1,IRF2,ZFP62,FOXF1,KLF10,GATA6,SMAD3,PAIP1,CPSF2,ZNF45,CELF1,SCMH1,KRR1,TMF1,ELK4,NFXL1,BACH1,PRDM2,AHR,RBM18,UNC50,SALL2,MYNN,TFCP2,PATL1,QKI,ZFR,STAU1,ZFX,NAF1,NR2C2,SYNJ1,STAT6,SIX5,SALL1,GPBP1,C1D,ARNT,KDM2B,G3BP2,JDP2,PLS1,LSM11,ZFHX3,DZIP1,PUM2,XPO1,TEAD3,ELF2,SMAD4,TIGD2,RBMS1,NFYB,ZNF43,MTF1,SP3,FOXC1,SRCAP,ETS1,DDX42,BAZ2B,ZHX2,CSTF2,AHDC1,KMT2A,ZEB2,PDCD4,NACC2,SF3A1,MAF,DACH1,ZFP3,MEF2D,TEP1,MECOM,ADAT1,ZBED6,ETV1,TET2,RBM33,NOL8,ATF2

Exist in public source

lncRNA targets the promoter region and positively regulates the gene expression.

Only predicted by TDF

ZHX3,AGO1,IRF2,FOXO3,BCL6,DDX17,DACH1,ELF1,UBR5,AGO2,ZBTB4,GTF2I,RFX7,ASH1L,DDX52,ATF1,MBNL1,SMAD1,FOXO4,ADAT1,SF3A1,RBMS2,HLF,TFCP2,TERF1,REST,MYNN,NCBP1,PATL1,PPIL4,RUNX1,ZFHX3,ZNF70,AGO4,FOXF1,RBMS3,TEP1,ZMAT3,CELF2,NFIA,CELF1,RORA,FOXJ2,ZFP91,ARID2,STAU1,ZBTB6,DDX1,FLI1

Exist in public source

lncRNA targets the promoter region and negatively regulates the gene expression.

Only predicted by TDF

RRP7A,EIF3G,E4F1,RBM42,RPP25,IRF3

Exist in public source

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lncRNA-RNA interaction for CTD-3157E16.1

lncRNA targets the 3'UTR region and negatively regulates the mRNA.

Only predicted by lncTar

RPP25,RALY,LSM4,SNRPA,SLIRP,EIF3G,DDX41,THOC6,LSM7,RNPS1,DDX56,DDX49,PUF60,USF2,HSF1,CENPA,GLI4,SUGP1,KLF16,THAP7,NR2F6,IRF3,RBM42,E4F1,PA2G4,MBD3

Exist in public source

lncRNA targets the skipped exon region.

-lncRNA and exonskipping events are positively correlated.

lncRNA and exonskipping events positive correlated

LncRNA Ensembl ID	LncRNA ENST ID	Exon ID	Skipped Exon	dG	ndG	Gene name with skipped exon	TransID with skipped exon	ORF mutation
ENSG00000265519	ENST00000582780	exon_skip_7558	chr1:81952986-81953025	-6.60	-0.5500	ADGRL2	ENST00000370717,ENST00000370728	In-frame
ENSG00000265519	ENST00000582780	exon_skip_21628	chr1:9756480-9756510	-6.55	-0.5955	CLSTN1	ENST00000377298	In-frame
ENSG00000265519	ENST00000582780	exon_skip_33516	chr1:156938417-156938513	-13.38	-0.1911	ARHGEF11	ENST00000361409	In-frame
ENSG00000265519	ENST00000582780	exon_skip_43507	chr10:84499874-84499959	-15.18	-0.1946	CCSER2	ENST00000224756	Frame-shift
ENSG00000265519	ENST00000582780	exon_skip_90104	chr12:10709907-10710114	-32.73	-0.1581	YBX3	ENST00000228251	In-frame
ENSG00000265519	ENST00000582780	exon_skip_287874	chr17:29085603-29085648	-10.45	-0.2750	MYO18A	ENST00000527372	In-frame
ENSG00000265519	ENST00000582780	exon_skip_436488	chr5:96726793-96726859	-7.20	-0.1125	CAST	ENST00000341926,ENST00000395813	In-frame
ENSG00000265519	ENST00000582780	exon_skip_29583	chr1:114780109-114780215	-8.92	-0.1898	SIKE1	ENST00000060969	Frame-shift
ENSG00000265519	ENST00000582780	exon_skip_59439	chr11:57737912-57738026	-11.06	-0.2698	TMX2	ENST00000278422	In-frame
ENSG00000265519	ENST00000582780	exon_skip_89597	chr12:6672349-6672532	-24.39	-0.1524	ZNF384	ENST00000361959,ENST00000396801	In-frame
ENSG00000265519	ENST00000582780	exon_skip_120741	chr15:34228428-34228589	-14.32	-0.1224	EMC4	ENST00000267750	Frame-shift
ENSG00000265519	ENST00000582780	exon_skip_140339	chr16:635611-635774	-18.68	-0.1279	METTL26	ENST00000301686	Frame-shift
ENSG00000265519	ENST00000582780	exon_skip_143275	chr16:24939363-24939597	-29.35	-0.1316	ARHGAP17	ENST00000289968	In-frame
ENSG00000265519	ENST00000582780	exon_skip_319500	chr19:45413962-45414034	-9.43	-0.1310	ERCC1	ENST00000300853,ENST00000589165	In-frame
ENSG00000265519	ENST00000582780	exon_skip_326741	chr2:73946718-73946906	-20.06	-0.1605	DGUOK	ENST00000264093	Frame-shift
ENSG00000265519	ENST00000582780	exon_skip_358606	chr20:63202286-63203807	-39.02	-0.1172	YTHDF1	ENST00000370339	In-frame
ENSG00000265519	ENST00000582780	exon_skip_445390	chr5:150403120-150403312	-18.52	-0.1332	CD74	ENST00000009530	In-frame
ENSG00000265519	ENST00000582780	exon_skip_363747	chr22:23877720-23877869	-21.63	-0.1492	SLC2A11	ENST00000345044	Frame-shift
ENSG00000265519	ENST00000582780	exon_skip_500083	chr9:129127963-129128068	-11.07	-0.1118	PTPA	ENST00000337738	In-frame
ENSG00000265519	ENST00000582780	exon_skip_390418	chr3:183842297-183842447	-10.67	-0.1286	PARL	ENST00000317096	In-frame

-lncRNA and exonskipping events are negatively correlated.

lncRNA and exonskipping events negative correlated

LncRNA Ensembl ID	LncRNA ENST ID	Exon ID	Skipped Exon	dG	ndG	Gene name with skipped exon	TransID with skipped exon	LOF
ENSG00000265519	ENST00000582780	exon_skip_48713	chr10:34336198-34336243	-8.33	-0.1893	PARD3	ENST00000374789	In-frame
ENSG00000265519	ENST00000582780	exon_skip_499771	chr9:128592982-128593042	-12.55	-0.2368	SPTAN1	ENST00000372731	In-frame

lncRNA targets by miRNA.

LncRNA Ensembl ID	miRNA ID	LncRNA ENST ID	Binding site in lncRNA	Score	Energy	Align Len	Public source
ENSG00000265519	hsa-mir-182	ENST00000582780	chr17:15787999-15788120	185.00	-120.68	116	NA
ENSG00000265519	hsa-mir-182	ENST00000582780	chr17:15787788-15787901	153.00	-87.85	110	NA
ENSG00000265519	hsa-mir-183	ENST00000582780	chr17:15787821-15787937	176.00	-95.97	107	NA
ENSG00000265519	hsa-mir-183	ENST00000582780	chr17:15787975-15788096	170.00	-110.33	114	NA
ENSG00000265519	hsa-mir-210	ENST00000582780	chr17:15788000-15788115	180.00	-133.01	112	NA
ENSG00000265519	hsa-mir-210	ENST00000582780	chr17:15787838-15787947	158.00	-105.46	88	NA
ENSG00000265519	hsa-mir-3613	ENST00000582780	chr17:15787899-15787980	165.00	-81.96	84	NA
ENSG00000265519	hsa-mir-484	ENST00000582780	chr17:15788030-15788109	166.00	-80.09	78	NA
ENSG00000265519	hsa-mir-96	ENST00000582780	chr17:15788016-15788110	160.00	-90.34	91	NA

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Variants for CTD-3157E16.1

RNA A-to-I editing events in lncRNA.

LncRNAediting ID

LncRNA Ensembl ID

Chromosome

Editing Position

Strand

Gene Type

Gene Name

Transcript ID

Transcript Type

Transcript Name

Edited-associated DElncRNAs in cancer.

LncRNA Ensembl ID

LncRNA Index

Cancer Type

Chr_Postion_Strand

AVE1

AVE2

log2FC

W-value

P-value

Adjc.p-value

Change

Correlation between RNA A-to-I editing events's frequecy and lncRNA expression.

LncRNA Ensembl ID

LncRNA Index

Correlation

P-value

Adjc.p-value

Cis-expression quantitative trait loci(cis-eQTL) of lncRNA.

LncRNA Ensembl ID

LncRNA Name

SNP info

Number of Positive corelated Cancer

Positive corelated Cancer

Number of Negative corelated Cancer

Negative corelated Cancer

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lncRNAs regulate the target genes through functioning as enhancers

lncRNA regulates differentially expressed genes by function as enhancer.

LncRNA Ensembl ID	PC Gene ID	PC Gene Name	Positive correlated cancers	Cancer with PC gene up-regulation	Cancer with PC gene down-regulation
ENSG00000265519	ENSG00000120756	PLS1	COAD,KICH,KIRC,KIRP,READ,TGCT,THCA,THYM		COAD,READ

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lncRNAs regulate the target genes through recruiting transcript factors

LncRNA-TF complex positively regulates the gene expression by target promoter region (#cancer types with positive correlation >= 5).

lncRNA ID	TF ID	TF Name	PCgene ID	PCgene Name	Number of Cancer	Canaer Types
ENSG00000265519	ENSG00000118058	KMT2A	ENSG00000174306	ZHX3	5	ACC,BRCA,KICH,OV,THCA
ENSG00000265519	ENSG00000148516	ZEB1	ENSG00000174306	ZHX3	6	ACC,BRCA,KICH,LUSC,STAD,THCA
ENSG00000265519	ENSG00000076108	BAZ2A	ENSG00000092847	AGO1	5	KIRP,MESO,OV,PCPG,THCA
ENSG00000265519	ENSG00000102189	EEA1	ENSG00000092847	AGO1	5	KICH,KIRP,MESO,PRAD,THCA
ENSG00000265519	ENSG00000114439	BBX	ENSG00000092847	AGO1	6	CHOL,KIRP,MESO,OV,PRAD,THCA
ENSG00000265519	ENSG00000117000	RLF	ENSG00000092847	AGO1	7	CHOL,KICH,KIRP,MESO,OV,PRAD,THCA
ENSG00000265519	ENSG00000118058	KMT2A	ENSG00000092847	AGO1	5	KICH,KIRP,MESO,PRAD,THCA
ENSG00000265519	ENSG00000134852	CLOCK	ENSG00000092847	AGO1	5	KICH,KIRP,MESO,PRAD,THCA
ENSG00000265519	ENSG00000171634	BPTF	ENSG00000092847	AGO1	7	CHOL,KICH,KIRP,MESO,PCPG,PRAD,THCA
ENSG00000265519	ENSG00000186660	ZFP91	ENSG00000092847	AGO1	5	CHOL,KIRP,MESO,PRAD,THCA
ENSG00000265519	ENSG00000189079	ARID2	ENSG00000092847	AGO1	6	KICH,KIRP,MESO,PCPG,PRAD,THCA
ENSG00000265519	ENSG00000114439	BBX	ENSG00000168310	IRF2	5	CHOL,HNSC,KIRP,PRAD,THYM
ENSG00000265519	ENSG00000171634	BPTF	ENSG00000168310	IRF2	5	CHOL,HNSC,KIRP,PRAD,THYM
ENSG00000265519	ENSG00000076108	BAZ2A	ENSG00000118689	FOXO3	5	BLCA,KIRP,THCA,THYM,UCEC
ENSG00000265519	ENSG00000102189	EEA1	ENSG00000118689	FOXO3	5	KIRP,TGCT,THCA,THYM,UCEC
ENSG00000265519	ENSG00000114439	BBX	ENSG00000118689	FOXO3	5	BLCA,KIRP,THCA,THYM,UCEC
ENSG00000265519	ENSG00000117000	RLF	ENSG00000118689	FOXO3	5	KICH,KIRP,THCA,THYM,UCEC
ENSG00000265519	ENSG00000118058	KMT2A	ENSG00000118689	FOXO3	6	BLCA,KICH,KIRP,THCA,THYM,UCEC
ENSG00000265519	ENSG00000171634	BPTF	ENSG00000118689	FOXO3	6	BLCA,KICH,KIRP,THCA,THYM,UCEC
ENSG00000265519	ENSG00000114439	BBX	ENSG00000100201	DDX17	5	ACC,BRCA,CHOL,THYM,UCEC
ENSG00000265519	ENSG00000118058	KMT2A	ENSG00000100201	DDX17	5	ACC,BRCA,KICH,THYM,UCEC
ENSG00000265519	ENSG00000171634	BPTF	ENSG00000100201	DDX17	5	ACC,CHOL,KICH,THYM,UCEC
ENSG00000265519	ENSG00000076108	BAZ2A	ENSG00000120690	ELF1	8	BLCA,BRCA,KIRP,MESO,PCPG,THCA,UCEC,UCS
ENSG00000265519	ENSG00000102189	EEA1	ENSG00000120690	ELF1	8	BRCA,KICH,KIRP,MESO,PCPG,PRAD,THCA,UCEC
ENSG00000265519	ENSG00000114439	BBX	ENSG00000120690	ELF1	10	ACC,BLCA,BRCA,CHOL,KIRC,KIRP,PRAD,SKCM,THCA,UCEC
ENSG00000265519	ENSG00000117000	RLF	ENSG00000120690	ELF1	8	CHOL,KICH,KIRP,MESO,PRAD,SKCM,THCA,UCEC
ENSG00000265519	ENSG00000118058	KMT2A	ENSG00000120690	ELF1	9	ACC,BLCA,BRCA,KICH,KIRP,MESO,PRAD,THCA,UCEC
ENSG00000265519	ENSG00000134852	CLOCK	ENSG00000120690	ELF1	7	KICH,KIRC,KIRP,MESO,PRAD,SKCM,THCA
ENSG00000265519	ENSG00000148516	ZEB1	ENSG00000120690	ELF1	5	ACC,BRCA,KICH,PRAD,THCA
ENSG00000265519	ENSG00000168769	TET2	ENSG00000120690	ELF1	5	BRCA,KIRP,OV,PRAD,THCA
ENSG00000265519	ENSG00000169554	ZEB2	ENSG00000120690	ELF1	5	KICH,KIRP,PCPG,PRAD,SKCM
ENSG00000265519	ENSG00000171634	BPTF	ENSG00000120690	ELF1	13	ACC,BLCA,CHOL,KICH,KIRC,KIRP,MESO,PCPG,PRAD,SKCM,THCA,UCEC,UCS
ENSG00000265519	ENSG00000178764	ZHX2	ENSG00000120690	ELF1	6	ACC,KICH,KIRP,MESO,PCPG,PRAD
ENSG00000265519	ENSG00000186660	ZFP91	ENSG00000120690	ELF1	10	ACC,BLCA,CHOL,KIRC,KIRP,MESO,PRAD,SKCM,THCA,UCEC
ENSG00000265519	ENSG00000189079	ARID2	ENSG00000120690	ELF1	8	ACC,BRCA,KICH,KIRP,MESO,PRAD,SKCM,THCA
ENSG00000265519	ENSG00000076108	BAZ2A	ENSG00000104517	UBR5	6	KIRP,MESO,PCPG,THCA,THYM,UCEC
ENSG00000265519	ENSG00000102189	EEA1	ENSG00000104517	UBR5	6	KIRP,MESO,PCPG,THCA,THYM,UCEC
ENSG00000265519	ENSG00000114439	BBX	ENSG00000104517	UBR5	7	ACC,KIRC,KIRP,MESO,THCA,THYM,UCEC
ENSG00000265519	ENSG00000117000	RLF	ENSG00000104517	UBR5	5	KIRP,MESO,THCA,THYM,UCEC
ENSG00000265519	ENSG00000118058	KMT2A	ENSG00000104517	UBR5	6	ACC,KIRP,MESO,THCA,THYM,UCEC
ENSG00000265519	ENSG00000134852	CLOCK	ENSG00000104517	UBR5	6	ACC,KIRC,KIRP,MESO,THCA,THYM
ENSG00000265519	ENSG00000171634	BPTF	ENSG00000104517	UBR5	8	ACC,KIRC,KIRP,MESO,PCPG,THCA,THYM,UCEC
ENSG00000265519	ENSG00000186660	ZFP91	ENSG00000104517	UBR5	6	ACC,KIRC,KIRP,MESO,THCA,UCEC
ENSG00000265519	ENSG00000189079	ARID2	ENSG00000104517	UBR5	5	ACC,KIRP,MESO,PCPG,THCA
ENSG00000265519	ENSG00000076108	BAZ2A	ENSG00000174282	ZBTB4	6	BRCA,KIRP,OV,PCPG,THCA,THYM
ENSG00000265519	ENSG00000102189	EEA1	ENSG00000174282	ZBTB4	7	BRCA,KICH,PCPG,PRAD,THCA,THYM,UCEC
ENSG00000265519	ENSG00000106571	GLI3	ENSG00000174282	ZBTB4	7	BRCA,KIRP,PRAD,STAD,TGCT,THCA,THYM
ENSG00000265519	ENSG00000114439	BBX	ENSG00000174282	ZBTB4	10	ACC,CHOL,KIRC,KIRP,OV,PRAD,READ,THCA,THYM,UCEC
ENSG00000265519	ENSG00000116016	EPAS1	ENSG00000174282	ZBTB4	9	COAD,KICH,LUSC,PRAD,READ,STAD,TGCT,THCA,THYM
ENSG00000265519	ENSG00000117000	RLF	ENSG00000174282	ZBTB4	5	CHOL,KICH,KIRP,PRAD,THCA
ENSG00000265519	ENSG00000118058	KMT2A	ENSG00000174282	ZBTB4	9	BRCA,CESC,KICH,KIRP,MESO,PRAD,THCA,THYM,UCEC
ENSG00000265519	ENSG00000134852	CLOCK	ENSG00000174282	ZBTB4	8	ACC,KICH,KIRC,KIRP,MESO,PRAD,THCA,THYM
ENSG00000265519	ENSG00000148516	ZEB1	ENSG00000174282	ZBTB4	9	BRCA,CESC,COAD,KICH,LUSC,PRAD,READ,STAD,TGCT
ENSG00000265519	ENSG00000165821	SALL2	ENSG00000174282	ZBTB4	7	BRCA,KICH,KIRC,KIRP,STAD,THCA,THYM
ENSG00000265519	ENSG00000168769	TET2	ENSG00000174282	ZBTB4	5	KIRP,OV,PRAD,READ,THCA
ENSG00000265519	ENSG00000169554	ZEB2	ENSG00000174282	ZBTB4	6	COAD,KICH,LUSC,PRAD,TGCT,THYM
ENSG00000265519	ENSG00000171634	BPTF	ENSG00000174282	ZBTB4	9	CHOL,KICH,KIRC,KIRP,MESO,PCPG,PRAD,THCA,THYM
ENSG00000265519	ENSG00000178764	ZHX2	ENSG00000174282	ZBTB4	5	ACC,KICH,KIRP,PCPG,PRAD
ENSG00000265519	ENSG00000186660	ZFP91	ENSG00000174282	ZBTB4	5	CHOL,KIRC,KIRP,READ,THCA
ENSG00000265519	ENSG00000189079	ARID2	ENSG00000174282	ZBTB4	5	ACC,KICH,KIRP,PRAD,THCA
ENSG00000265519	ENSG00000076108	BAZ2A	ENSG00000263001	GTF2I	10	BLCA,BRCA,KIRP,MESO,OV,PCPG,THCA,THYM,UCEC,UCS
ENSG00000265519	ENSG00000100644	HIF1A	ENSG00000263001	GTF2I	5	ACC,KICH,KIRC,PRAD,UCS
ENSG00000265519	ENSG00000102189	EEA1	ENSG00000263001	GTF2I	9	BRCA,KICH,KIRP,MESO,PCPG,PRAD,THCA,THYM,UCEC
ENSG00000265519	ENSG00000106571	GLI3	ENSG00000263001	GTF2I	5	BRCA,KIRP,PRAD,THCA,THYM
ENSG00000265519	ENSG00000114439	BBX	ENSG00000263001	GTF2I	13	ACC,BLCA,BRCA,CHOL,KIRC,KIRP,MESO,OV,PRAD,SKCM,THCA,THYM,UCEC
ENSG00000265519	ENSG00000117000	RLF	ENSG00000263001	GTF2I	10	CHOL,KICH,KIRP,MESO,OV,PRAD,SKCM,THCA,THYM,UCEC
ENSG00000265519	ENSG00000118058	KMT2A	ENSG00000263001	GTF2I	11	ACC,BLCA,BRCA,KICH,KIRP,MESO,OV,PRAD,THCA,THYM,UCEC
ENSG00000265519	ENSG00000134852	CLOCK	ENSG00000263001	GTF2I	8	ACC,KICH,KIRC,KIRP,MESO,PRAD,THCA,THYM
ENSG00000265519	ENSG00000165821	SALL2	ENSG00000263001	GTF2I	5	ACC,KIRC,KIRP,THCA,THYM
ENSG00000265519	ENSG00000168769	TET2	ENSG00000263001	GTF2I	5	BRCA,KIRP,OV,PRAD,THCA
ENSG00000265519	ENSG00000171634	BPTF	ENSG00000263001	GTF2I	15	ACC,BLCA,CHOL,KICH,KIRC,KIRP,MESO,OV,PCPG,PRAD,SKCM,THCA,THYM,UCEC,UCS
ENSG00000265519	ENSG00000186660	ZFP91	ENSG00000263001	GTF2I	10	ACC,BLCA,CHOL,KIRC,KIRP,MESO,PRAD,SKCM,THCA,UCEC
ENSG00000265519	ENSG00000189079	ARID2	ENSG00000263001	GTF2I	9	ACC,BRCA,KICH,KIRP,MESO,PCPG,PRAD,SKCM,THCA
ENSG00000265519	ENSG00000076108	BAZ2A	ENSG00000181827	RFX7	6	BRCA,KIRP,OV,PCPG,THCA,UCEC
ENSG00000265519	ENSG00000102189	EEA1	ENSG00000181827	RFX7	7	BRCA,KICH,KIRP,PCPG,PRAD,THCA,UCEC
ENSG00000265519	ENSG00000114439	BBX	ENSG00000181827	RFX7	10	ACC,BRCA,CHOL,HNSC,KIRP,OV,PRAD,SKCM,THCA,UCEC
ENSG00000265519	ENSG00000117000	RLF	ENSG00000181827	RFX7	7	CHOL,KICH,KIRP,PRAD,SKCM,THCA,UCEC
ENSG00000265519	ENSG00000118058	KMT2A	ENSG00000181827	RFX7	9	ACC,BRCA,HNSC,KICH,KIRP,OV,PRAD,THCA,UCEC
ENSG00000265519	ENSG00000134852	CLOCK	ENSG00000181827	RFX7	6	ACC,KICH,KIRP,PRAD,SKCM,THCA
ENSG00000265519	ENSG00000140836	ZFHX3	ENSG00000181827	RFX7	5	HNSC,OV,PRAD,SKCM,THCA
ENSG00000265519	ENSG00000168769	TET2	ENSG00000181827	RFX7	5	BRCA,KIRP,OV,PRAD,THCA
ENSG00000265519	ENSG00000171634	BPTF	ENSG00000181827	RFX7	11	ACC,CHOL,HNSC,KICH,KIRP,OV,PCPG,PRAD,SKCM,THCA,UCEC
ENSG00000265519	ENSG00000186660	ZFP91	ENSG00000181827	RFX7	7	ACC,CHOL,KIRP,PRAD,SKCM,THCA,UCEC
ENSG00000265519	ENSG00000189079	ARID2	ENSG00000181827	RFX7	8	ACC,BRCA,KICH,KIRP,PCPG,PRAD,SKCM,THCA
ENSG00000265519	ENSG00000076108	BAZ2A	ENSG00000116539	ASH1L	9	BLCA,BRCA,KIRP,MESO,OV,PCPG,THCA,THYM,UCEC
ENSG00000265519	ENSG00000102189	EEA1	ENSG00000116539	ASH1L	10	BRCA,KICH,KIRP,MESO,PCPG,PRAD,TGCT,THCA,THYM,UCEC
ENSG00000265519	ENSG00000106571	GLI3	ENSG00000116539	ASH1L	6	BRCA,KIRP,PRAD,TGCT,THCA,THYM
ENSG00000265519	ENSG00000114439	BBX	ENSG00000116539	ASH1L	14	ACC,BLCA,BRCA,HNSC,KIRC,KIRP,MESO,OV,PRAD,READ,SKCM,THCA,THYM,UCEC
ENSG00000265519	ENSG00000116016	EPAS1	ENSG00000116539	ASH1L	5	KICH,READ,STAD,TGCT,THYM
ENSG00000265519	ENSG00000117000	RLF	ENSG00000116539	ASH1L	8	KICH,KIRP,MESO,PRAD,SKCM,THCA,THYM,UCEC
ENSG00000265519	ENSG00000118058	KMT2A	ENSG00000116539	ASH1L	12	ACC,BLCA,BRCA,HNSC,KICH,KIRP,MESO,OV,PRAD,THCA,THYM,UCEC
ENSG00000265519	ENSG00000134852	CLOCK	ENSG00000116539	ASH1L	9	ACC,KICH,KIRC,KIRP,MESO,PRAD,SKCM,THCA,THYM
ENSG00000265519	ENSG00000140836	ZFHX3	ENSG00000116539	ASH1L	7	HNSC,OV,PRAD,SKCM,STAD,TGCT,THCA
ENSG00000265519	ENSG00000148516	ZEB1	ENSG00000116539	ASH1L	8	ACC,BRCA,COAD,KICH,PRAD,READ,TGCT,THCA
ENSG00000265519	ENSG00000165821	SALL2	ENSG00000116539	ASH1L	7	KICH,KIRC,KIRP,STAD,TGCT,THCA,THYM
ENSG00000265519	ENSG00000168769	TET2	ENSG00000116539	ASH1L	6	BRCA,KIRP,OV,PRAD,READ,THCA
ENSG00000265519	ENSG00000169554	ZEB2	ENSG00000116539	ASH1L	7	COAD,KICH,KIRP,PRAD,SKCM,TGCT,THYM
ENSG00000265519	ENSG00000171634	BPTF	ENSG00000116539	ASH1L	14	ACC,BLCA,HNSC,KICH,KIRC,KIRP,MESO,OV,PCPG,PRAD,SKCM,THCA,THYM,UCEC
ENSG00000265519	ENSG00000186660	ZFP91	ENSG00000116539	ASH1L	10	ACC,BLCA,KIRC,KIRP,MESO,PRAD,READ,SKCM,THCA,UCEC
ENSG00000265519	ENSG00000189079	ARID2	ENSG00000116539	ASH1L	9	ACC,BRCA,KICH,KIRP,MESO,PCPG,PRAD,SKCM,THCA
ENSG00000265519	ENSG00000134852	CLOCK	ENSG00000278053	DDX52	5	ACC,KICH,KIRC,KIRP,SKCM
ENSG00000265519	ENSG00000171634	BPTF	ENSG00000278053	DDX52	5	ACC,KICH,KIRC,KIRP,SKCM
ENSG00000265519	ENSG00000076108	BAZ2A	ENSG00000123268	ATF1	7	BRCA,KIRP,MESO,PCPG,THCA,THYM,UCEC
ENSG00000265519	ENSG00000102189	EEA1	ENSG00000123268	ATF1	10	BRCA,KICH,KIRP,MESO,PCPG,PRAD,TGCT,THCA,THYM,UCEC
ENSG00000265519	ENSG00000114439	BBX	ENSG00000123268	ATF1	11	ACC,BRCA,CESC,CHOL,KIRC,KIRP,MESO,PRAD,THCA,THYM,UCEC
ENSG00000265519	ENSG00000117000	RLF	ENSG00000123268	ATF1	8	CHOL,KICH,KIRP,MESO,PRAD,THCA,THYM,UCEC
ENSG00000265519	ENSG00000118058	KMT2A	ENSG00000123268	ATF1	8	BRCA,KICH,KIRP,MESO,PRAD,THCA,THYM,UCEC
ENSG00000265519	ENSG00000134852	CLOCK	ENSG00000123268	ATF1	8	ACC,KICH,KIRC,KIRP,MESO,PRAD,THCA,THYM
ENSG00000265519	ENSG00000171634	BPTF	ENSG00000123268	ATF1	12	ACC,CESC,CHOL,KICH,KIRC,KIRP,MESO,PCPG,PRAD,THCA,THYM,UCEC
ENSG00000265519	ENSG00000186660	ZFP91	ENSG00000123268	ATF1	8	ACC,CHOL,KIRC,KIRP,MESO,PRAD,THCA,UCEC
ENSG00000265519	ENSG00000189079	ARID2	ENSG00000123268	ATF1	8	ACC,BRCA,KICH,KIRP,MESO,PCPG,PRAD,THCA
ENSG00000265519	ENSG00000076108	BAZ2A	ENSG00000170365	SMAD1	6	KIRP,PCPG,THCA,THYM,UCEC,UCS
ENSG00000265519	ENSG00000102189	EEA1	ENSG00000170365	SMAD1	7	KIRP,PCPG,PRAD,TGCT,THCA,THYM,UCEC
ENSG00000265519	ENSG00000114439	BBX	ENSG00000170365	SMAD1	7	KIRC,KIRP,PRAD,READ,THCA,THYM,UCEC
ENSG00000265519	ENSG00000116016	EPAS1	ENSG00000170365	SMAD1	5	COAD,GBM,READ,TGCT,THCA
ENSG00000265519	ENSG00000117000	RLF	ENSG00000170365	SMAD1	5	KIRP,PRAD,THCA,THYM,UCEC
ENSG00000265519	ENSG00000118058	KMT2A	ENSG00000170365	SMAD1	6	ACC,KIRP,PRAD,THCA,THYM,UCEC
ENSG00000265519	ENSG00000134852	CLOCK	ENSG00000170365	SMAD1	6	ACC,KIRC,KIRP,PRAD,THCA,THYM
ENSG00000265519	ENSG00000148516	ZEB1	ENSG00000170365	SMAD1	6	ACC,COAD,PRAD,READ,TGCT,THCA
ENSG00000265519	ENSG00000165821	SALL2	ENSG00000170365	SMAD1	5	KIRC,KIRP,TGCT,THCA,THYM
ENSG00000265519	ENSG00000171634	BPTF	ENSG00000170365	SMAD1	8	ACC,KIRC,KIRP,PCPG,PRAD,THCA,THYM,UCEC
ENSG00000265519	ENSG00000186660	ZFP91	ENSG00000170365	SMAD1	7	ACC,KIRC,KIRP,PRAD,READ,THCA,UCEC
ENSG00000265519	ENSG00000114439	BBX	ENSG00000065457	ADAT1	6	CESC,HNSC,KIRC,KIRP,SKCM,THCA
ENSG00000265519	ENSG00000134852	CLOCK	ENSG00000065457	ADAT1	5	KICH,KIRC,KIRP,SKCM,THCA
ENSG00000265519	ENSG00000171634	BPTF	ENSG00000065457	ADAT1	8	CESC,HNSC,KICH,KIRC,KIRP,PCPG,SKCM,THCA
ENSG00000265519	ENSG00000076108	BAZ2A	ENSG00000099995	SF3A1	7	BLCA,KIRP,MESO,PCPG,THCA,THYM,UCEC
ENSG00000265519	ENSG00000114439	BBX	ENSG00000099995	SF3A1	9	ACC,CHOL,HNSC,KIRC,KIRP,MESO,PRAD,THCA,THYM
ENSG00000265519	ENSG00000117000	RLF	ENSG00000099995	SF3A1	7	CHOL,KICH,KIRP,MESO,PRAD,THCA,THYM
ENSG00000265519	ENSG00000118058	KMT2A	ENSG00000099995	SF3A1	8	ACC,HNSC,KICH,KIRP,MESO,PRAD,THCA,THYM
ENSG00000265519	ENSG00000165821	SALL2	ENSG00000099995	SF3A1	5	KICH,KIRC,KIRP,THCA,THYM
ENSG00000265519	ENSG00000171634	BPTF	ENSG00000099995	SF3A1	13	ACC,BLCA,CHOL,HNSC,KICH,KIRC,KIRP,MESO,PCPG,PRAD,THCA,THYM,UCEC
ENSG00000265519	ENSG00000178764	ZHX2	ENSG00000099995	SF3A1	6	ACC,KICH,KIRP,MESO,PCPG,PRAD
ENSG00000265519	ENSG00000186660	ZFP91	ENSG00000099995	SF3A1	9	ACC,BLCA,CHOL,KIRC,KIRP,MESO,PRAD,THCA,UCEC
ENSG00000265519	ENSG00000114439	BBX	ENSG00000076067	RBMS2	7	BRCA,CHOL,KIRP,OV,PRAD,THYM,UCEC
ENSG00000265519	ENSG00000116016	EPAS1	ENSG00000076067	RBMS2	5	KICH,LUSC,PRAD,TGCT,THYM
ENSG00000265519	ENSG00000117000	RLF	ENSG00000076067	RBMS2	6	CHOL,KICH,KIRP,PRAD,THYM,UCEC
ENSG00000265519	ENSG00000118058	KMT2A	ENSG00000076067	RBMS2	7	BRCA,KICH,KIRP,OV,PRAD,THYM,UCEC
ENSG00000265519	ENSG00000148516	ZEB1	ENSG00000076067	RBMS2	5	BRCA,KICH,LUSC,PRAD,TGCT
ENSG00000265519	ENSG00000169554	ZEB2	ENSG00000076067	RBMS2	5	KICH,LUSC,PRAD,TGCT,THYM
ENSG00000265519	ENSG00000171634	BPTF	ENSG00000076067	RBMS2	6	CHOL,KICH,KIRP,PRAD,THYM,UCEC
ENSG00000265519	ENSG00000076108	BAZ2A	ENSG00000135457	TFCP2	6	BRCA,KIRP,OV,PCPG,THCA,THYM
ENSG00000265519	ENSG00000114439	BBX	ENSG00000135457	TFCP2	6	CHOL,KIRC,KIRP,OV,THCA,THYM
ENSG00000265519	ENSG00000165821	SALL2	ENSG00000135457	TFCP2	5	BRCA,KIRC,KIRP,THCA,THYM
ENSG00000265519	ENSG00000171634	BPTF	ENSG00000135457	TFCP2	7	CHOL,KICH,KIRC,KIRP,PCPG,THCA,THYM
ENSG00000265519	ENSG00000189079	ARID2	ENSG00000135457	TFCP2	5	BRCA,KICH,KIRP,PCPG,THCA
ENSG00000265519	ENSG00000076108	BAZ2A	ENSG00000084093	REST	7	BLCA,BRCA,KIRP,THCA,THYM,UCEC,UCS
ENSG00000265519	ENSG00000102189	EEA1	ENSG00000084093	REST	6	BRCA,KIRP,PRAD,THCA,THYM,UCEC
ENSG00000265519	ENSG00000114439	BBX	ENSG00000084093	REST	11	ACC,BLCA,BRCA,HNSC,KIRC,KIRP,PRAD,SKCM,THCA,THYM,UCEC
ENSG00000265519	ENSG00000117000	RLF	ENSG00000084093	REST	6	KIRP,PRAD,SKCM,THCA,THYM,UCEC
ENSG00000265519	ENSG00000118058	KMT2A	ENSG00000084093	REST	9	ACC,BLCA,BRCA,HNSC,KIRP,PRAD,THCA,THYM,UCEC
ENSG00000265519	ENSG00000134852	CLOCK	ENSG00000084093	REST	7	ACC,KIRC,KIRP,PRAD,SKCM,THCA,THYM
ENSG00000265519	ENSG00000171634	BPTF	ENSG00000084093	REST	11	ACC,BLCA,HNSC,KIRC,KIRP,PRAD,SKCM,THCA,THYM,UCEC,UCS
ENSG00000265519	ENSG00000186660	ZFP91	ENSG00000084093	REST	8	ACC,BLCA,KIRC,KIRP,PRAD,SKCM,THCA,UCEC
ENSG00000265519	ENSG00000189079	ARID2	ENSG00000084093	REST	6	ACC,BRCA,KIRP,PRAD,SKCM,THCA
ENSG00000265519	ENSG00000171634	BPTF	ENSG00000085274	MYNN	5	ACC,KICH,SKCM,THCA,THYM
ENSG00000265519	ENSG00000171634	BPTF	ENSG00000136937	NCBP1	6	CHOL,KICH,KIRC,KIRP,PCPG,THCA
ENSG00000265519	ENSG00000102189	EEA1	ENSG00000166889	PATL1	5	MESO,PRAD,TGCT,THCA,THYM
ENSG00000265519	ENSG00000114439	BBX	ENSG00000166889	PATL1	5	CHOL,MESO,PRAD,THCA,THYM
ENSG00000265519	ENSG00000117000	RLF	ENSG00000166889	PATL1	5	CHOL,MESO,PRAD,THCA,THYM
ENSG00000265519	ENSG00000102189	EEA1	ENSG00000131013	PPIL4	5	KIRP,PRAD,THCA,THYM,UCEC
ENSG00000265519	ENSG00000114439	BBX	ENSG00000131013	PPIL4	8	BLCA,CHOL,KIRC,KIRP,PRAD,THCA,THYM,UCEC
ENSG00000265519	ENSG00000117000	RLF	ENSG00000131013	PPIL4	7	CHOL,KICH,KIRP,PRAD,THCA,THYM,UCEC
ENSG00000265519	ENSG00000118058	KMT2A	ENSG00000131013	PPIL4	7	BLCA,CESC,KIRP,PRAD,THCA,THYM,UCEC
ENSG00000265519	ENSG00000134852	CLOCK	ENSG00000131013	PPIL4	6	KICH,KIRC,KIRP,PRAD,THCA,THYM
ENSG00000265519	ENSG00000165821	SALL2	ENSG00000131013	PPIL4	5	KICH,KIRC,KIRP,THCA,THYM
ENSG00000265519	ENSG00000171634	BPTF	ENSG00000131013	PPIL4	10	BLCA,CESC,CHOL,KICH,KIRC,KIRP,PRAD,THCA,THYM,UCEC
ENSG00000265519	ENSG00000186660	ZFP91	ENSG00000131013	PPIL4	6	BLCA,KIRC,KIRP,PRAD,THCA,UCEC
ENSG00000265519	ENSG00000114439	BBX	ENSG00000140836	ZFHX3	7	CESC,HNSC,OV,PRAD,SKCM,THCA,THYM
ENSG00000265519	ENSG00000118058	KMT2A	ENSG00000140836	ZFHX3	6	CESC,HNSC,OV,PRAD,THCA,THYM
ENSG00000265519	ENSG00000165821	SALL2	ENSG00000140836	ZFHX3	7	CESC,OV,SKCM,STAD,TGCT,THCA,THYM
ENSG00000265519	ENSG00000169554	ZEB2	ENSG00000140836	ZFHX3	5	HNSC,PRAD,SKCM,TGCT,THYM
ENSG00000265519	ENSG00000171634	BPTF	ENSG00000140836	ZFHX3	7	CESC,HNSC,OV,PRAD,SKCM,THCA,THYM
ENSG00000265519	ENSG00000106571	GLI3	ENSG00000187792	ZNF70	6	KIRP,PRAD,STAD,TGCT,THCA,THYM
ENSG00000265519	ENSG00000165821	SALL2	ENSG00000187792	ZNF70	5	KIRP,STAD,TGCT,THCA,THYM
ENSG00000265519	ENSG00000102189	EEA1	ENSG00000134698	AGO4	7	BRCA,KICH,PRAD,TGCT,THCA,THYM,UCEC
ENSG00000265519	ENSG00000114439	BBX	ENSG00000134698	AGO4	7	BRCA,CHOL,OV,PRAD,THCA,THYM,UCEC
ENSG00000265519	ENSG00000117000	RLF	ENSG00000134698	AGO4	7	CHOL,KICH,OV,PRAD,THCA,THYM,UCEC
ENSG00000265519	ENSG00000118058	KMT2A	ENSG00000134698	AGO4	8	ACC,BRCA,KICH,OV,PRAD,THCA,THYM,UCEC
ENSG00000265519	ENSG00000171634	BPTF	ENSG00000134698	AGO4	7	ACC,CHOL,KICH,PRAD,THCA,THYM,UCEC
ENSG00000265519	ENSG00000106571	GLI3	ENSG00000144642	RBMS3	5	PRAD,STAD,TGCT,THCA,THYM
ENSG00000265519	ENSG00000114439	BBX	ENSG00000144642	RBMS3	5	BRCA,PRAD,SKCM,THCA,THYM
ENSG00000265519	ENSG00000116016	EPAS1	ENSG00000144642	RBMS3	6	LUSC,PRAD,STAD,TGCT,THCA,THYM
ENSG00000265519	ENSG00000140836	ZFHX3	ENSG00000144642	RBMS3	5	PRAD,SKCM,STAD,TGCT,THCA
ENSG00000265519	ENSG00000148516	ZEB1	ENSG00000144642	RBMS3	6	BRCA,LUSC,PRAD,STAD,TGCT,THCA
ENSG00000265519	ENSG00000114439	BBX	ENSG00000172667	ZMAT3	9	ACC,CHOL,HNSC,KIRC,KIRP,PRAD,SKCM,THYM,UCEC
ENSG00000265519	ENSG00000118058	KMT2A	ENSG00000172667	ZMAT3	6	ACC,HNSC,KIRP,PRAD,THYM,UCEC
ENSG00000265519	ENSG00000134852	CLOCK	ENSG00000172667	ZMAT3	6	ACC,KIRC,KIRP,MESO,PRAD,THYM
ENSG00000265519	ENSG00000169554	ZEB2	ENSG00000172667	ZMAT3	5	HNSC,KIRP,PRAD,TGCT,THYM
ENSG00000265519	ENSG00000171634	BPTF	ENSG00000172667	ZMAT3	9	ACC,CHOL,HNSC,KIRC,KIRP,PRAD,SKCM,THYM,UCEC
ENSG00000265519	ENSG00000186660	ZFP91	ENSG00000172667	ZMAT3	5	CHOL,KIRC,KIRP,PRAD,UCEC
ENSG00000265519	ENSG00000106571	GLI3	ENSG00000162599	NFIA	5	PRAD,STAD,TGCT,THCA,THYM
ENSG00000265519	ENSG00000140836	ZFHX3	ENSG00000162599	NFIA	5	PRAD,SKCM,STAD,TGCT,THCA
ENSG00000265519	ENSG00000148516	ZEB1	ENSG00000162599	NFIA	6	BRCA,KICH,PRAD,STAD,TGCT,THCA
ENSG00000265519	ENSG00000114439	BBX	ENSG00000149187	CELF1	5	CHOL,KIRP,THCA,THYM,UCEC
ENSG00000265519	ENSG00000117000	RLF	ENSG00000149187	CELF1	5	CHOL,KIRP,THCA,THYM,UCEC
ENSG00000265519	ENSG00000171634	BPTF	ENSG00000149187	CELF1	5	CHOL,KIRP,THCA,THYM,UCEC
ENSG00000265519	ENSG00000186660	ZFP91	ENSG00000149187	CELF1	5	CHOL,KIRP,SARC,THCA,UCEC
ENSG00000265519	ENSG00000102189	EEA1	ENSG00000069667	RORA	5	BRCA,KICH,PRAD,THCA,THYM
ENSG00000265519	ENSG00000114439	BBX	ENSG00000069667	RORA	6	ACC,BRCA,KIRP,PRAD,THCA,THYM
ENSG00000265519	ENSG00000118058	KMT2A	ENSG00000069667	RORA	7	ACC,BRCA,KICH,KIRP,PRAD,THCA,THYM
ENSG00000265519	ENSG00000134852	CLOCK	ENSG00000069667	RORA	6	ACC,KICH,KIRP,PRAD,THCA,THYM
ENSG00000265519	ENSG00000171634	BPTF	ENSG00000069667	RORA	6	ACC,KICH,KIRP,PRAD,THCA,THYM
ENSG00000265519	ENSG00000189079	ARID2	ENSG00000069667	RORA	6	ACC,BRCA,KICH,KIRP,PRAD,THCA
ENSG00000265519	ENSG00000076108	BAZ2A	ENSG00000065970	FOXJ2	5	KIRP,OV,THCA,THYM,UCEC
ENSG00000265519	ENSG00000102189	EEA1	ENSG00000065970	FOXJ2	5	KIRP,PRAD,THCA,THYM,UCEC
ENSG00000265519	ENSG00000118058	KMT2A	ENSG00000065970	FOXJ2	5	KIRP,PRAD,THCA,THYM,UCEC
ENSG00000265519	ENSG00000076108	BAZ2A	ENSG00000186660	ZFP91	5	BLCA,KIRP,MESO,THCA,UCEC
ENSG00000265519	ENSG00000102189	EEA1	ENSG00000186660	ZFP91	5	KIRP,MESO,PRAD,THCA,UCEC
ENSG00000265519	ENSG00000114439	BBX	ENSG00000186660	ZFP91	11	ACC,BLCA,CHOL,KIRC,KIRP,MESO,PRAD,READ,SKCM,THCA,UCEC
ENSG00000265519	ENSG00000117000	RLF	ENSG00000186660	ZFP91	7	CHOL,KIRP,MESO,PRAD,SKCM,THCA,UCEC
ENSG00000265519	ENSG00000118058	KMT2A	ENSG00000186660	ZFP91	7	ACC,BLCA,KIRP,MESO,PRAD,THCA,UCEC
ENSG00000265519	ENSG00000134852	CLOCK	ENSG00000186660	ZFP91	7	ACC,KIRC,KIRP,MESO,PRAD,SKCM,THCA
ENSG00000265519	ENSG00000171634	BPTF	ENSG00000186660	ZFP91	10	ACC,BLCA,CHOL,KIRC,KIRP,MESO,PRAD,SKCM,THCA,UCEC
ENSG00000265519	ENSG00000189079	ARID2	ENSG00000186660	ZFP91	6	ACC,KIRP,MESO,PRAD,SKCM,THCA
ENSG00000265519	ENSG00000076108	BAZ2A	ENSG00000189079	ARID2	5	BRCA,KIRP,MESO,PCPG,THCA
ENSG00000265519	ENSG00000102189	EEA1	ENSG00000189079	ARID2	7	BRCA,KICH,KIRP,MESO,PCPG,PRAD,THCA
ENSG00000265519	ENSG00000114439	BBX	ENSG00000189079	ARID2	7	ACC,BRCA,KIRP,MESO,PRAD,SKCM,THCA
ENSG00000265519	ENSG00000117000	RLF	ENSG00000189079	ARID2	5	KICH,KIRP,PRAD,SKCM,THCA
ENSG00000265519	ENSG00000118058	KMT2A	ENSG00000189079	ARID2	7	ACC,BRCA,KICH,KIRP,MESO,PRAD,THCA
ENSG00000265519	ENSG00000134852	CLOCK	ENSG00000189079	ARID2	7	ACC,KICH,KIRP,MESO,PRAD,SKCM,THCA
ENSG00000265519	ENSG00000171634	BPTF	ENSG00000189079	ARID2	8	ACC,KICH,KIRP,MESO,PCPG,PRAD,SKCM,THCA
ENSG00000265519	ENSG00000186660	ZFP91	ENSG00000189079	ARID2	6	ACC,KIRP,MESO,PRAD,SKCM,THCA
ENSG00000265519	ENSG00000076108	BAZ2A	ENSG00000124214	STAU1	5	KIRP,MESO,PCPG,THYM,UCEC
ENSG00000265519	ENSG00000102189	EEA1	ENSG00000124214	STAU1	5	KIRP,MESO,PCPG,THCA,THYM
ENSG00000265519	ENSG00000114439	BBX	ENSG00000124214	STAU1	7	ACC,KIRC,KIRP,MESO,THCA,THYM,UCEC
ENSG00000265519	ENSG00000134852	CLOCK	ENSG00000124214	STAU1	6	ACC,KIRC,KIRP,MESO,THCA,THYM
ENSG00000265519	ENSG00000171634	BPTF	ENSG00000124214	STAU1	8	ACC,KIRP,MESO,PCPG,THCA,THYM,UCEC,UCS
ENSG00000265519	ENSG00000186660	ZFP91	ENSG00000124214	STAU1	6	ACC,KIRC,KIRP,MESO,THCA,UCEC
ENSG00000265519	ENSG00000076108	BAZ2A	ENSG00000186130	ZBTB6	5	KIRP,MESO,THCA,THYM,UCEC
ENSG00000265519	ENSG00000102189	EEA1	ENSG00000186130	ZBTB6	6	KICH,KIRP,MESO,THCA,THYM,UCEC
ENSG00000265519	ENSG00000114439	BBX	ENSG00000186130	ZBTB6	8	ACC,CHOL,KIRC,KIRP,SKCM,THCA,THYM,UCEC
ENSG00000265519	ENSG00000117000	RLF	ENSG00000186130	ZBTB6	8	CHOL,KICH,KIRP,MESO,SKCM,THCA,THYM,UCEC
ENSG00000265519	ENSG00000118058	KMT2A	ENSG00000186130	ZBTB6	7	ACC,KICH,KIRP,MESO,THCA,THYM,UCEC
ENSG00000265519	ENSG00000134852	CLOCK	ENSG00000186130	ZBTB6	8	ACC,KICH,KIRC,KIRP,MESO,SKCM,THCA,THYM
ENSG00000265519	ENSG00000165821	SALL2	ENSG00000186130	ZBTB6	5	ACC,KICH,KIRP,THCA,THYM
ENSG00000265519	ENSG00000171634	BPTF	ENSG00000186130	ZBTB6	11	ACC,CHOL,KICH,KIRC,KIRP,MESO,SKCM,THCA,THYM,UCEC,UCS
ENSG00000265519	ENSG00000186660	ZFP91	ENSG00000186130	ZBTB6	8	ACC,CHOL,KIRC,KIRP,MESO,SKCM,THCA,UCEC
ENSG00000265519	ENSG00000189079	ARID2	ENSG00000186130	ZBTB6	5	KICH,KIRP,MESO,SKCM,THCA
ENSG00000265519	ENSG00000171634	BPTF	ENSG00000079785	DDX1	6	ACC,CHOL,KICH,PCPG,THCA,THYM
ENSG00000265519	ENSG00000148516	ZEB1	ENSG00000151702	FLI1	5	COAD,HNSC,KICH,LUSC,READ

LncRNA-TF complex negatively regulates the gene expression by target promoter region (#cancer types with negative correlation >= 5).

lncRNA ID	TF ID	TF Name	PCgene ID	PCgene Name	Number of Cancer	Canaer Types
ENSG00000265519	ENSG00000114439	BBX	ENSG00000167967	E4F1	5	KIRC,PRAD,READ,THYM,UCEC
ENSG00000265519	ENSG00000102189	EEA1	ENSG00000126254	RBM42	6	KICH,MESO,PCPG,PRAD,THCA,THYM
ENSG00000265519	ENSG00000134852	CLOCK	ENSG00000126254	RBM42	5	KICH,MESO,PRAD,THCA,THYM
ENSG00000265519	ENSG00000171634	BPTF	ENSG00000126254	RBM42	6	KICH,MESO,PCPG,PRAD,THCA,THYM
ENSG00000265519	ENSG00000102189	EEA1	ENSG00000126456	IRF3	7	BRCA,MESO,PCPG,PRAD,THCA,THYM,UCEC
ENSG00000265519	ENSG00000114439	BBX	ENSG00000126456	IRF3	7	BRCA,KIRC,MESO,PRAD,THCA,THYM,UCEC
ENSG00000265519	ENSG00000134852	CLOCK	ENSG00000126456	IRF3	5	KIRC,MESO,PRAD,THCA,THYM
ENSG00000265519	ENSG00000171634	BPTF	ENSG00000126456	IRF3	6	MESO,PCPG,PRAD,THCA,THYM,UCEC
ENSG00000265519	ENSG00000186660	ZFP91	ENSG00000126456	IRF3	5	KIRC,MESO,PRAD,THCA,UCEC

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lncRNAs regulate the alternative splicing event through interacting with splicing factor

LncRNA-RBP complex positively regulates the exon skippping events by target skipped eoxon region.

LncRNA Ensembl ID

RBP ID

RBP Gene Name

Exon Skipping ID

Skipped Exon

EX Gene Name

EX Affected TransID

ORF_anno

Cancer Type

LncRNA-RBP complex negatively regulates the exon skippping events by target skipped eoxon region.

LncRNA Ensembl ID

RBP ID

RBP Gene Name

Exon Skipping ID

Skipped Exon

EX Gene Name

EX Affected TransID

ORF_anno

Cancer Type

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lncRNAs regulate mRNA through targeting the 3'-UTR region

lncRNA regulates differential expressed mRNA by directly targeting 3' UTR region.

LncRNA Ensembl ID

LncRNA ENST ID

PC Gene Name

PC Gene ID

PC ENST ID

nDG

Cancer with PC gene up-regulation

Cancer with PC gene Down-regulation

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lncRNAs regulate mRNA by competing with miRNA

lncRNA regulates mRNA by competing the miRNA binding site with mRNA.

LncRNA Ensembl ID	lncRNA-miRNA-mRNA	Cancer Types
ENSG00000265519	CTD-3157E16.1,hsa-mir-96,MFAP4	UCEC,KICH,TGCT,PRAD,READ
ENSG00000265519	CTD-3157E16.1,hsa-mir-96,VCL	UCEC,KICH,TGCT,PRAD,READ
ENSG00000265519	CTD-3157E16.1,hsa-mir-96,CRISPLD2	UCEC,KICH,TGCT,PRAD,READ
ENSG00000265519	CTD-3157E16.1,hsa-mir-96,FERMT2	UCEC,KICH,TGCT,PRAD,READ
ENSG00000265519	CTD-3157E16.1,hsa-mir-96,MYLK	UCEC,KICH,TGCT,PRAD,READ
ENSG00000265519	CTD-3157E16.1,hsa-mir-96,CALD1	UCEC,KICH,TGCT,PRAD,READ
ENSG00000265519	CTD-3157E16.1,hsa-mir-96,SSPN	UCEC,KICH,TGCT,PRAD,READ
ENSG00000265519	CTD-3157E16.1,hsa-mir-96,PODN	UCEC,KICH,TGCT,PRAD,READ
ENSG00000265519	CTD-3157E16.1,hsa-mir-96,OLFML1	UCEC,KICH,TGCT,PRAD,READ
ENSG00000265519	CTD-3157E16.1,hsa-mir-96,PTGIS	UCEC,KICH,TGCT,PRAD,READ
ENSG00000265519	CTD-3157E16.1,hsa-mir-96,TGFB1I1	UCEC,KICH,TGCT,PRAD,READ
ENSG00000265519	CTD-3157E16.1,hsa-mir-96,DIXDC1	UCEC,KICH,TGCT,PRAD,READ
ENSG00000265519	CTD-3157E16.1,hsa-mir-96,DNAJB5	UCEC,KICH,TGCT,PRAD,READ
ENSG00000265519	CTD-3157E16.1,hsa-mir-96,PER1	UCEC,KICH,TGCT,PRAD,READ
ENSG00000265519	CTD-3157E16.1,hsa-mir-96,MRGPRF	UCEC,KICH,TGCT,PRAD,READ
ENSG00000265519	CTD-3157E16.1,hsa-mir-96,ANTXR2	UCEC,KICH,TGCT,PRAD,READ
ENSG00000265519	CTD-3157E16.1,hsa-mir-96,CYBRD1	UCEC,KICH,TGCT,PRAD,READ
ENSG00000265519	CTD-3157E16.1,hsa-mir-96,GEM	UCEC,KICH,TGCT,PRAD,READ
ENSG00000265519	CTD-3157E16.1,hsa-mir-96,RASL12	UCEC,KICH,TGCT,PRAD,READ
ENSG00000265519	CTD-3157E16.1,hsa-mir-96,PCDHGC3	UCEC,KICH,TGCT,PRAD,READ
ENSG00000265519	CTD-3157E16.1,hsa-mir-96,TCEAL7	UCEC,KICH,TGCT,PRAD,READ
ENSG00000265519	CTD-3157E16.1,hsa-mir-96,SLIT3	UCEC,KICH,TGCT,PRAD,READ
ENSG00000265519	CTD-3157E16.1,hsa-mir-96,SMIM10	UCEC,KICH,TGCT,PRAD,READ
ENSG00000265519	CTD-3157E16.1,hsa-mir-96,COPZ2	UCEC,KICH,TGCT,PRAD,READ
ENSG00000265519	CTD-3157E16.1,hsa-mir-96,ADGRA2	UCEC,KICH,TGCT,PRAD,READ
ENSG00000265519	CTD-3157E16.1,hsa-mir-96,MSRB3	UCEC,KICH,TGCT,PRAD,READ
ENSG00000265519	CTD-3157E16.1,hsa-mir-96,S1PR3	UCEC,KICH,TGCT,PRAD,READ
ENSG00000265519	CTD-3157E16.1,hsa-mir-96,AOC3	UCEC,KICH,TGCT,PRAD,READ
ENSG00000265519	CTD-3157E16.1,hsa-mir-96,DPT	UCEC,KICH,TGCT,PRAD,READ
ENSG00000265519	CTD-3157E16.1,hsa-mir-96,PRELP	UCEC,KICH,TGCT,PRAD,READ
ENSG00000265519	CTD-3157E16.1,hsa-mir-96,PLN	UCEC,KICH,TGCT,PRAD,READ
ENSG00000265519	CTD-3157E16.1,hsa-mir-96,OGN	UCEC,KICH,TGCT,PRAD,READ
ENSG00000265519	CTD-3157E16.1,hsa-mir-96,MYH11	UCEC,KICH,TGCT,PRAD,READ
ENSG00000265519	CTD-3157E16.1,hsa-mir-96,CNRIP1	UCEC,KICH,TGCT,PRAD,READ
ENSG00000265519	CTD-3157E16.1,hsa-mir-96,CD34	UCEC,KICH,TGCT,PRAD,READ
ENSG00000265519	CTD-3157E16.1,hsa-mir-96,CPED1	UCEC,KICH,TGCT,PRAD,READ
ENSG00000265519	CTD-3157E16.1,hsa-mir-96,EHD2	UCEC,KICH,TGCT,PRAD,READ
ENSG00000265519	CTD-3157E16.1,hsa-mir-96,TAGLN	UCEC,KICH,TGCT,PRAD,READ
ENSG00000265519	CTD-3157E16.1,hsa-mir-96,TSC22D3	UCEC,KICH,TGCT,PRAD,READ
ENSG00000265519	CTD-3157E16.1,hsa-mir-96,SPART	UCEC,KICH,TGCT,PRAD,READ
ENSG00000265519	CTD-3157E16.1,hsa-mir-96,MAP3K3	UCEC,KICH,TGCT,PRAD,READ
ENSG00000265519	CTD-3157E16.1,hsa-mir-96,CAVIN2	UCEC,KICH,TGCT,PRAD,READ
ENSG00000265519	CTD-3157E16.1,hsa-mir-96,DCN	UCEC,KICH,TGCT,PRAD,READ
ENSG00000265519	CTD-3157E16.1,hsa-mir-96,CLMP	UCEC,KICH,TGCT,PRAD,READ
ENSG00000265519	CTD-3157E16.1,hsa-mir-96,EMILIN1	UCEC,KICH,TGCT,PRAD,READ
ENSG00000265519	CTD-3157E16.1,hsa-mir-96,DDR2	UCEC,KICH,TGCT,PRAD,READ
ENSG00000265519	CTD-3157E16.1,hsa-mir-96,SGCE	UCEC,KICH,TGCT,PRAD,READ
ENSG00000265519	CTD-3157E16.1,hsa-mir-96,PI16	UCEC,KICH,TGCT,PRAD,READ
ENSG00000265519	CTD-3157E16.1,hsa-mir-96,EMCN	UCEC,KICH,TGCT,PRAD,READ
ENSG00000265519	CTD-3157E16.1,hsa-mir-96,PMP22	UCEC,KICH,TGCT,PRAD,READ
ENSG00000265519	CTD-3157E16.1,hsa-mir-96,CYYR1	UCEC,KICH,TGCT,PRAD,READ
ENSG00000265519	CTD-3157E16.1,hsa-mir-96,RHOJ	UCEC,KICH,TGCT,PRAD,READ
ENSG00000265519	CTD-3157E16.1,hsa-mir-96,LMOD1	UCEC,KICH,TGCT,PRAD,READ
ENSG00000265519	CTD-3157E16.1,hsa-mir-96,CAVIN1	UCEC,KICH,TGCT,PRAD,READ
ENSG00000265519	CTD-3157E16.1,hsa-mir-96,SH3BP5	UCEC,KICH,TGCT,PRAD,READ
ENSG00000265519	CTD-3157E16.1,hsa-mir-96,TUBB6	UCEC,KICH,TGCT,PRAD,READ
ENSG00000265519	CTD-3157E16.1,hsa-mir-96,ZCCHC24	UCEC,KICH,TGCT,PRAD,READ
ENSG00000265519	CTD-3157E16.1,hsa-mir-96,LAYN	UCEC,KICH,TGCT,PRAD,READ
ENSG00000265519	CTD-3157E16.1,hsa-mir-96,JAM2	UCEC,KICH,TGCT,PRAD,READ
ENSG00000265519	CTD-3157E16.1,hsa-mir-3613,SLMAP	UCEC,THCA,PRAD,READ,KIRP
ENSG00000265519	CTD-3157E16.1,hsa-mir-484,CRIM1	UCEC,PRAD,ACC,GBM,THYM
ENSG00000265519	CTD-3157E16.1,hsa-mir-484,MAP3K20	UCEC,PRAD,ACC,GBM,THYM
ENSG00000265519	CTD-3157E16.1,hsa-mir-484,ZYG11B	UCEC,PRAD,ACC,GBM,THYM
ENSG00000265519	CTD-3157E16.1,hsa-mir-182,MYH11	UCEC,KICH,TGCT,PRAD,READ
ENSG00000265519	CTD-3157E16.1,hsa-mir-182,CALD1	UCEC,KICH,TGCT,PRAD,READ
ENSG00000265519	CTD-3157E16.1,hsa-mir-182,TGFB1I1	UCEC,KICH,TGCT,PRAD,READ
ENSG00000265519	CTD-3157E16.1,hsa-mir-182,MSRB3	UCEC,KICH,TGCT,PRAD,READ
ENSG00000265519	CTD-3157E16.1,hsa-mir-182,TNS1	UCEC,KICH,TGCT,PRAD,READ
ENSG00000265519	CTD-3157E16.1,hsa-mir-182,TSC22D3	UCEC,KICH,TGCT,PRAD,READ
ENSG00000265519	CTD-3157E16.1,hsa-mir-182,MRGPRF	UCEC,KICH,TGCT,PRAD,READ
ENSG00000265519	CTD-3157E16.1,hsa-mir-182,RECK	UCEC,KICH,TGCT,PRAD,READ
ENSG00000265519	CTD-3157E16.1,hsa-mir-182,PER1	UCEC,KICH,TGCT,PRAD,READ
ENSG00000265519	CTD-3157E16.1,hsa-mir-182,CNRIP1	UCEC,KICH,TGCT,PRAD,READ
ENSG00000265519	CTD-3157E16.1,hsa-mir-182,PLN	UCEC,KICH,TGCT,PRAD,READ
ENSG00000265519	CTD-3157E16.1,hsa-mir-182,FBXL7	UCEC,KICH,TGCT,PRAD,READ
ENSG00000265519	CTD-3157E16.1,hsa-mir-182,ANTXR2	UCEC,KICH,TGCT,PRAD,READ
ENSG00000265519	CTD-3157E16.1,hsa-mir-182,ZCCHC24	UCEC,KICH,TGCT,PRAD,READ
ENSG00000265519	CTD-3157E16.1,hsa-mir-182,DCN	UCEC,KICH,TGCT,PRAD,READ
ENSG00000265519	CTD-3157E16.1,hsa-mir-182,TCEAL7	UCEC,KICH,TGCT,PRAD,READ
ENSG00000265519	CTD-3157E16.1,hsa-mir-182,PRELP	UCEC,KICH,TGCT,PRAD,READ
ENSG00000265519	CTD-3157E16.1,hsa-mir-182,SH3BP5	UCEC,KICH,TGCT,PRAD,READ
ENSG00000265519	CTD-3157E16.1,hsa-mir-182,MFAP4	UCEC,KICH,TGCT,PRAD,READ
ENSG00000265519	CTD-3157E16.1,hsa-mir-182,ADGRA2	UCEC,KICH,TGCT,PRAD,READ
ENSG00000265519	CTD-3157E16.1,hsa-mir-182,MYLK	UCEC,KICH,TGCT,PRAD,READ
ENSG00000265519	CTD-3157E16.1,hsa-mir-182,EMP3	UCEC,KICH,TGCT,PRAD,READ
ENSG00000265519	CTD-3157E16.1,hsa-mir-182,SPART	UCEC,KICH,TGCT,PRAD,READ
ENSG00000265519	CTD-3157E16.1,hsa-mir-182,EHD2	UCEC,KICH,TGCT,PRAD,READ
ENSG00000265519	CTD-3157E16.1,hsa-mir-182,PMP22	UCEC,KICH,TGCT,PRAD,READ
ENSG00000265519	CTD-3157E16.1,hsa-mir-182,SLIT3	UCEC,KICH,TGCT,PRAD,READ
ENSG00000265519	CTD-3157E16.1,hsa-mir-182,PODN	UCEC,KICH,TGCT,PRAD,READ
ENSG00000265519	CTD-3157E16.1,hsa-mir-182,ACVRL1	UCEC,KICH,TGCT,PRAD,READ
ENSG00000265519	CTD-3157E16.1,hsa-mir-182,LMOD1	UCEC,KICH,TGCT,PRAD,READ
ENSG00000265519	CTD-3157E16.1,hsa-mir-182,OLFML1	UCEC,KICH,TGCT,PRAD,READ
ENSG00000265519	CTD-3157E16.1,hsa-mir-182,TNFSF12	UCEC,KICH,TGCT,PRAD,READ
ENSG00000265519	CTD-3157E16.1,hsa-mir-182,COPZ2	UCEC,KICH,TGCT,PRAD,READ
ENSG00000265519	CTD-3157E16.1,hsa-mir-182,LIMS2	UCEC,KICH,TGCT,PRAD,READ
ENSG00000265519	CTD-3157E16.1,hsa-mir-182,PTGIS	UCEC,KICH,TGCT,PRAD,READ
ENSG00000265519	CTD-3157E16.1,hsa-mir-182,DPT	UCEC,KICH,TGCT,PRAD,READ
ENSG00000265519	CTD-3157E16.1,hsa-mir-182,COL6A2	UCEC,KICH,TGCT,PRAD,READ
ENSG00000265519	CTD-3157E16.1,hsa-mir-182,CPED1	UCEC,KICH,TGCT,PRAD,READ
ENSG00000265519	CTD-3157E16.1,hsa-mir-182,MMRN2	UCEC,KICH,TGCT,PRAD,READ
ENSG00000265519	CTD-3157E16.1,hsa-mir-182,TAGLN	UCEC,KICH,TGCT,PRAD,READ
ENSG00000265519	CTD-3157E16.1,hsa-mir-182,AOC3	UCEC,KICH,TGCT,PRAD,READ
ENSG00000265519	CTD-3157E16.1,hsa-mir-182,CRISPLD2	UCEC,KICH,TGCT,PRAD,READ
ENSG00000265519	CTD-3157E16.1,hsa-mir-182,COL14A1	UCEC,KICH,TGCT,PRAD,READ
ENSG00000265519	CTD-3157E16.1,hsa-mir-182,DNAJB5	UCEC,KICH,TGCT,PRAD,READ
ENSG00000265519	CTD-3157E16.1,hsa-mir-182,FERMT2	UCEC,KICH,TGCT,PRAD,READ
ENSG00000265519	CTD-3157E16.1,hsa-mir-182,CAVIN2	UCEC,KICH,TGCT,PRAD,READ
ENSG00000265519	CTD-3157E16.1,hsa-mir-182,S1PR1	UCEC,KICH,TGCT,PRAD,READ
ENSG00000265519	CTD-3157E16.1,hsa-mir-182,JAM2	UCEC,KICH,TGCT,PRAD,READ
ENSG00000265519	CTD-3157E16.1,hsa-mir-182,SSPN	UCEC,KICH,TGCT,PRAD,READ
ENSG00000265519	CTD-3157E16.1,hsa-mir-182,LAYN	UCEC,KICH,TGCT,PRAD,READ
ENSG00000265519	CTD-3157E16.1,hsa-mir-182,PI16	UCEC,KICH,TGCT,PRAD,READ
ENSG00000265519	CTD-3157E16.1,hsa-mir-182,CLMP	UCEC,KICH,TGCT,PRAD,READ
ENSG00000265519	CTD-3157E16.1,hsa-mir-182,OGN	UCEC,KICH,TGCT,PRAD,READ
ENSG00000265519	CTD-3157E16.1,hsa-mir-182,EMILIN1	UCEC,KICH,TGCT,PRAD,READ
ENSG00000265519	CTD-3157E16.1,hsa-mir-182,DDR2	UCEC,KICH,TGCT,PRAD,READ
ENSG00000265519	CTD-3157E16.1,hsa-mir-182,SGCE	UCEC,KICH,TGCT,PRAD,READ
ENSG00000265519	CTD-3157E16.1,hsa-mir-182,GEM	UCEC,KICH,TGCT,PRAD,READ
ENSG00000265519	CTD-3157E16.1,hsa-mir-183,KANK2	UCEC,KICH,TGCT,PRAD,READ
ENSG00000265519	CTD-3157E16.1,hsa-mir-183,OGN	UCEC,KICH,TGCT,PRAD,READ
ENSG00000265519	CTD-3157E16.1,hsa-mir-183,TNFSF12	UCEC,KICH,TGCT,PRAD,READ
ENSG00000265519	CTD-3157E16.1,hsa-mir-183,TSC22D3	UCEC,KICH,TGCT,PRAD,READ
ENSG00000265519	CTD-3157E16.1,hsa-mir-183,MRGPRF	UCEC,KICH,TGCT,PRAD,READ
ENSG00000265519	CTD-3157E16.1,hsa-mir-183,COL14A1	UCEC,KICH,TGCT,PRAD,READ
ENSG00000265519	CTD-3157E16.1,hsa-mir-183,ADGRA2	UCEC,KICH,TGCT,PRAD,READ
ENSG00000265519	CTD-3157E16.1,hsa-mir-183,OLFML1	UCEC,KICH,TGCT,PRAD,READ
ENSG00000265519	CTD-3157E16.1,hsa-mir-183,PTGIS	UCEC,KICH,TGCT,PRAD,READ
ENSG00000265519	CTD-3157E16.1,hsa-mir-183,DPT	UCEC,KICH,TGCT,PRAD,READ
ENSG00000265519	CTD-3157E16.1,hsa-mir-183,COL6A2	UCEC,KICH,TGCT,PRAD,READ
ENSG00000265519	CTD-3157E16.1,hsa-mir-183,CYYR1	UCEC,KICH,TGCT,PRAD,READ
ENSG00000265519	CTD-3157E16.1,hsa-mir-183,TAGLN	UCEC,KICH,TGCT,PRAD,READ
ENSG00000265519	CTD-3157E16.1,hsa-mir-183,AOC3	UCEC,KICH,TGCT,PRAD,READ
ENSG00000265519	CTD-3157E16.1,hsa-mir-183,DNAJB5	UCEC,KICH,TGCT,PRAD,READ
ENSG00000265519	CTD-3157E16.1,hsa-mir-183,PER1	UCEC,KICH,TGCT,PRAD,READ
ENSG00000265519	CTD-3157E16.1,hsa-mir-183,JAM2	UCEC,KICH,TGCT,PRAD,READ
ENSG00000265519	CTD-3157E16.1,hsa-mir-183,GEM	UCEC,KICH,TGCT,PRAD,READ
ENSG00000265519	CTD-3157E16.1,hsa-mir-183,FBXL7	UCEC,KICH,TGCT,PRAD,READ
ENSG00000265519	CTD-3157E16.1,hsa-mir-183,TNS1	UCEC,KICH,TGCT,PRAD,READ
ENSG00000265519	CTD-3157E16.1,hsa-mir-183,CALD1	UCEC,KICH,TGCT,PRAD,READ
ENSG00000265519	CTD-3157E16.1,hsa-mir-183,COPZ2	UCEC,KICH,TGCT,PRAD,READ
ENSG00000265519	CTD-3157E16.1,hsa-mir-183,S1PR3	UCEC,KICH,TGCT,PRAD,READ
ENSG00000265519	CTD-3157E16.1,hsa-mir-183,MYLK	UCEC,KICH,TGCT,PRAD,READ
ENSG00000265519	CTD-3157E16.1,hsa-mir-183,HIC1	UCEC,KICH,TGCT,PRAD,READ
ENSG00000265519	CTD-3157E16.1,hsa-mir-183,SSPN	UCEC,KICH,TGCT,PRAD,READ
ENSG00000265519	CTD-3157E16.1,hsa-mir-183,MYH11	UCEC,KICH,TGCT,PRAD,READ
ENSG00000265519	CTD-3157E16.1,hsa-mir-183,CPED1	UCEC,KICH,TGCT,PRAD,READ
ENSG00000265519	CTD-3157E16.1,hsa-mir-183,LIMS2	UCEC,KICH,TGCT,PRAD,READ
ENSG00000265519	CTD-3157E16.1,hsa-mir-183,SLIT3	UCEC,KICH,TGCT,PRAD,READ
ENSG00000265519	CTD-3157E16.1,hsa-mir-183,INMT	UCEC,KICH,TGCT,PRAD,READ
ENSG00000265519	CTD-3157E16.1,hsa-mir-183,GPRASP2	UCEC,KICH,TGCT,PRAD,READ
ENSG00000265519	CTD-3157E16.1,hsa-mir-183,CNRIP1	UCEC,KICH,TGCT,PRAD,READ
ENSG00000265519	CTD-3157E16.1,hsa-mir-183,SGCE	UCEC,KICH,TGCT,PRAD,READ
ENSG00000265519	CTD-3157E16.1,hsa-mir-183,ANTXR2	UCEC,KICH,TGCT,PRAD,READ
ENSG00000265519	CTD-3157E16.1,hsa-mir-183,ZCCHC24	UCEC,KICH,TGCT,PRAD,READ
ENSG00000265519	CTD-3157E16.1,hsa-mir-183,MFAP4	UCEC,KICH,TGCT,PRAD,READ
ENSG00000265519	CTD-3157E16.1,hsa-mir-183,TGFB1I1	UCEC,KICH,TGCT,PRAD,READ
ENSG00000265519	CTD-3157E16.1,hsa-mir-183,SPART	UCEC,KICH,TGCT,PRAD,READ
ENSG00000265519	CTD-3157E16.1,hsa-mir-183,EHD2	UCEC,KICH,TGCT,PRAD,READ
ENSG00000265519	CTD-3157E16.1,hsa-mir-183,PODN	UCEC,KICH,TGCT,PRAD,READ
ENSG00000265519	CTD-3157E16.1,hsa-mir-183,VSIR	UCEC,KICH,TGCT,PRAD,READ
ENSG00000265519	CTD-3157E16.1,hsa-mir-183,ACVRL1	UCEC,KICH,TGCT,PRAD,READ
ENSG00000265519	CTD-3157E16.1,hsa-mir-183,EMCN	UCEC,KICH,TGCT,PRAD,READ
ENSG00000265519	CTD-3157E16.1,hsa-mir-183,LMOD1	UCEC,KICH,TGCT,PRAD,READ
ENSG00000265519	CTD-3157E16.1,hsa-mir-183,PI16	UCEC,KICH,TGCT,PRAD,READ
ENSG00000265519	CTD-3157E16.1,hsa-mir-183,MMRN2	UCEC,KICH,TGCT,PRAD,READ
ENSG00000265519	CTD-3157E16.1,hsa-mir-183,SERPINF1	UCEC,KICH,TGCT,PRAD,READ
ENSG00000265519	CTD-3157E16.1,hsa-mir-183,EMILIN1	UCEC,KICH,TGCT,PRAD,READ
ENSG00000265519	CTD-3157E16.1,hsa-mir-183,CRISPLD2	UCEC,KICH,TGCT,PRAD,READ
ENSG00000265519	CTD-3157E16.1,hsa-mir-183,FERMT2	UCEC,KICH,TGCT,PRAD,READ
ENSG00000265519	CTD-3157E16.1,hsa-mir-183,CAVIN2	UCEC,KICH,TGCT,PRAD,READ
ENSG00000265519	CTD-3157E16.1,hsa-mir-183,S1PR1	UCEC,KICH,TGCT,PRAD,READ
ENSG00000265519	CTD-3157E16.1,hsa-mir-183,TCEAL7	UCEC,KICH,TGCT,PRAD,READ
ENSG00000265519	CTD-3157E16.1,hsa-mir-183,DCN	UCEC,KICH,TGCT,PRAD,READ
ENSG00000265519	CTD-3157E16.1,hsa-mir-183,CLMP	UCEC,KICH,TGCT,PRAD,READ
ENSG00000265519	CTD-3157E16.1,hsa-mir-183,DDR2	UCEC,KICH,TGCT,PRAD,READ
ENSG00000265519	CTD-3157E16.1,hsa-mir-183,SH3BP5	UCEC,KICH,TGCT,PRAD,READ
ENSG00000265519	CTD-3157E16.1,hsa-mir-183,MSRB3	UCEC,KICH,TGCT,PRAD,READ
ENSG00000265519	CTD-3157E16.1,hsa-mir-183,RECK	UCEC,KICH,TGCT,PRAD,READ
ENSG00000265519	CTD-3157E16.1,hsa-mir-183,PLN	UCEC,KICH,TGCT,PRAD,READ
ENSG00000265519	CTD-3157E16.1,hsa-mir-183,PRELP	UCEC,KICH,TGCT,PRAD,READ
ENSG00000265519	CTD-3157E16.1,hsa-mir-183,PMP22	UCEC,KICH,TGCT,PRAD,READ
ENSG00000265519	CTD-3157E16.1,hsa-mir-183,LAYN	UCEC,KICH,TGCT,PRAD,READ

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lncRNA coding potential

ORFfinder result for the gencode.v22.lncRNA.transcript.fa.

lncRNA Ensembl ID	lncRNA ENST ID	length(AA)	start at transcript	end at transcript
ENSG00000265519.1	ENST00000582780.1	57	216	389

	lncRNA summary
	lncRNA structure and expression level
	lncRNA-Protein interaction
	lncRNA-DNA interaction
	lncRNA-RNA interaction
	Variants in lncRNA
	lncRNAs regulate the target genes through functioning as enhancers
	lncRNAs regulate the target genes through recruiting transcript factors
	lncRNAs regulate the alternative splicing events through interacting with splicing factor
	lncRNAs regulate mRNA through targeting the 3'-UTR region
	lncRNAs regulate mRNA by competing with miRNA
	lncRNA coding potential