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lncRNA: ENSG00000265415

Summary for CTD-2510F5.4

Gene summary

Gene information	Ensembl ID	ENSG00000265415
	Gene symbol	CTD-2510F5.4
	Gene name
	HGNC
	Entrez ID
	Gene type	antisense
	Synonyms
	UniProtAcc

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Structure and expression level for CTD-2510F5.4

Differentially expressed gene analysis between cancer and normal samples.

Ensembl ID	Base mean	log2FC(AD/control)	lfcSE	Stat	P-value	Adjc.p-value	DEG direction	Cancer type
ENSG00000265415	8.764696e+01	2.435690e+00	3.217202e-01	7.570832e+00	3.710000e-14	1.360000e-12	UP	GBM
ENSG00000265415	3.473267e+01	2.779364e+00	4.744577e-01	5.857982e+00	4.690000e-09	4.670000e-08	UP	CHOL
ENSG00000265415	3.653564e+01	1.757087e+00	1.540638e-01	1.140493e+01	3.950000e-30	4.050000e-29	UP	KIRC
ENSG00000265415	1.271490e+02	2.017571e+00	2.787824e-01	7.237081e+00	4.580000e-13	1.480000e-11	UP	BLCA
ENSG00000265415	1.683692e+02	4.321392e+00	5.893733e-01	7.332182e+00	2.260000e-13	2.440000e-11	UP	CESC
ENSG00000265415	1.695798e+02	1.548272e+00	1.404216e-01	1.102589e+01	2.870000e-28	1.320000e-26	UP	HNSC
ENSG00000265415	4.619451e+01	2.817797e+00	2.154110e-01	1.308103e+01	4.230000e-39	2.450000e-37	UP	UCEC
ENSG00000265415	3.100667e+02	1.871131e+00	2.970296e-01	6.299477e+00	2.990000e-10	2.350000e-08	UP	ESCA
ENSG00000265415	1.746744e+02	3.063664e+00	1.197634e-01	2.558097e+01	2.480000e-144	6.150000e-142	UP	LUSC
ENSG00000265415	1.262222e+02	2.580404e+00	1.363931e-01	1.891887e+01	7.970000e-80	4.170000e-78	UP	BRCA
ENSG00000265415	8.576472e+01	2.339261e+00	1.665411e-01	1.404615e+01	8.130000e-45	3.560000e-43	UP	LUAD
ENSG00000265415	8.650846e+01	1.329969e+00	1.111268e-01	1.196803e+01	5.230000e-33	1.670000e-31	UP	COAD
ENSG00000265415	2.382880e+01	2.653299e+00	2.452592e-01	1.081835e+01	2.820000e-27	1.090000e-25	UP	LIHC
ENSG00000265415	1.684440e+02	1.584920e+00	1.612194e-01	9.830831e+00	8.290000e-23	8.590000e-21	UP	STAD
ENSG00000265415	8.659292e+01	1.052594e+00	2.559176e-01	4.113020e+00	3.910000e-05	3.290210e-04	UP	READ

Correlation between lncRNAs and cancer stages.

LncRNA Ensembl ID	Correlation	P-value	Cancer Type	Adjc.p-value
ENSG00000265415	4.240006e-01	1.216933e-04	ACC	2.007470e-03
ENSG00000265415	4.245213e-01	3.655029e-03	CHOL	4.973915e-03
ENSG00000265415	3.178567e-01	9.694507e-16	KIRC	4.406594e-15
ENSG00000265415	4.030344e-01	4.693155e-17	LIHC	1.132479e-15
ENSG00000265415	3.680640e-01	3.073534e-20	LUAD	1.828753e-18
ENSG00000265415	3.750802e-01	1.026133e-19	LUSC	1.774427e-17
ENSG00000265415	3.444540e-01	8.547230e-18	UCEC	1.910557e-16

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lncRNA-Protein interaction for CTD-2510F5.4

lncRNA-epigenetic factor interaction (#cancer types with positive correlation >= 5).

LncRNA Ensembl ID

LncRNA ENST ID

LncRNA Name

Protein Ensembl ID

Protein Name

CatRAPID Score

Lncpro Score

UniPortID

Gene Subtype

Public source

lncRNA-transcript factor interaction (#cancer types with positive correlation >= 5).

LncRNA Ensembl ID

LncRNA ENST ID

LncRNA Name

Protein Ensembl ID

Protein Name

CatRAPID Score

Lncpro Score

UniPortID

Gene Subtype

Public source

lncRNA-RNA binding protein interaction (#cancer types with positive correlation >= 5).

LncRNA Ensembl ID

LncRNA ENST ID

LncRNA Name

Protein Ensembl ID

Protein Name

CatRAPID Score

Lncpro Score

UniPortID

Gene Subtype

Public source

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lncRNA-DNA interaction for CTD-2510F5.4

lncRNA targets the enhancer region and positively regulates the gene expression.

lncRNA targets the promoter region and positively regulates the gene expression.

lncRNA targets the promoter region and negatively regulates the gene expression.

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lncRNA-RNA interaction for CTD-2510F5.4

lncRNA targets the 3'UTR region and negatively regulates the mRNA.

Only predicted by lncTar

TBC1D17,DNAJC4,TM7SF2,DPP7,REX1BD,MCRIP2,PRR22,HAGH,STARD10,DBP,SERPING1,TMEM91,RRAS,PLAC9,SLC27A5,NDUFA13,FBXL15,LRRC29,TPRG1L,PAXX,CFD,TOM1L2,MOB2,ACKR1,RFXANK,BLOC1S1,VPS28,CCDC61,PET100,NAA38,MIEF2,ZDHHC1,CPTP,PTOV1,POLL,RAMP2,CHCHD10,CHMP2A,HDAC11,SIRT6,TMEM238,TMEM54,JUND,EDF1,SELENOW,LYRM9,YPEL3,BDH2,CCDC159,IL17RC,TMEM88,TPT1,NPC2,SERF2,IL3RA,GNPTG,MAP1LC3A,TRAPPC6A,D2HGDH,TPSAB1,COX4I1,C12orf57,DENND6B,C4orf48,RAB4B,PHPT1,ABHD14A,TOM1,NOP53,UBXN6,SIL1,GPX4,PBXIP1,NME3,GAMT,MICOS13,N4BP2L1,CYP27A1,RPL36,ABHD14B,TLE5,RILP,COX6B1,PFDN5,NDUFA7,LRRN4CL,WDR13,WDR83OS,AAMDC,CAPNS1,TOLLIP,TNFSF12,LYL1,DNAJB2,CERS4,MRPL55,S1PR4,FKBP8,CYBA,ABTB1,PEX11G,TNFRSF14,NDUFB10,C1orf54,VAMP2,PYCARD,ACADS,RBPMS,IFT43,MRPL41,OAF,ADH1B,ROGDI,CTSF,PPDPF,FAM167B,PHLDA3,CBX7,DPM3,HDAC10,HCST,SERGEF,MSRA,GIPC1,NDRG2,PTGDS,RILPL2,ELOB,CST3,MTIF3,LIMS2,PSME2,ARSA,TMEM205,HEXD,SERTAD1,SGF29,NAA60,PRDX5,HIGD2A,HRAS,UCN,TRIR,RABAC1,REEP5,ECI1,POU6F1,SEPTIN4,NDUFB11,CYB5A,SSR4,NUPR1,VEGFB,NOSIP,EVA1B,CLEC3B,SCRN2,COX7A1,DHRS12,CD81,CTSD,INO80B,CDK10,GFER,SYTL1,SELENOM,PHF1,RARRES2,GSTK1,STAP2,PKIG,PGAP3,TRAPPC1,SLC27A1,PEX16,VIPR1,NR1H2,SLC9A3R2,ERCC5,MARCHF2,LDHD,NPDC1,INKA1,GMFG,FASTK,EXD3,ATP5F1D,ARL6IP4,FIS1,RHBDD2,P4HTM,RAMP3,FCGRT,C1R,ALKBH7,LMF1,SNAI3,CIRBP,SAT2,TFEB,TMEM219,RAB17,NDUFB7,DHRS1,HHLA3,TXNRD2,METTL26,FDX2,ETFB,IDUA,FKBP2,NR1H3,HCFC1R1,OCEL1,CCDC130,NDUFB8,NDUFA3,CCS,TMEM134,ALDH2,VSIR

Exist in public source

lncRNA targets the skipped exon region.

-lncRNA and exonskipping events are positively correlated.

lncRNA and exonskipping events positive correlated

LncRNA Ensembl ID	LncRNA ENST ID	Exon ID	Skipped Exon	dG	ndG	Gene name with skipped exon	TransID with skipped exon	ORF mutation
ENSG00000265415	ENST00000577678	exon_skip_131398	chr15:101286213-101286293	-7.41	-0.1577	SNRPA1	ENST00000254193	Frame-shift
ENSG00000265415	ENST00000577678	exon_skip_360302	chr21:42896926-42897047	-14.84	-0.1546	NDUFV3	ENST00000340344	Frame-shift
ENSG00000265415	ENST00000577678	exon_skip_106758	chr14:55663954-55664041	-11.44	-0.1467	KTN1	ENST00000395314	In-frame
ENSG00000265415	ENST00000577678	exon_skip_114200	chr14:73279280-73279424	-13.65	-0.1338	NUMB	ENST00000355058,ENST00000555238	In-frame
ENSG00000265415	ENST00000577678	exon_skip_148110	chr17:4892401-4892512	-12.31	-0.1324	MINK1	ENST00000355280	In-frame
ENSG00000265415	ENST00000577678	exon_skip_300663	chr19:1425877-1425960	-10.76	-0.1454	DAZAP1	ENST00000233078	Frame-shift
ENSG00000265415	ENST00000577678	exon_skip_303809	chr19:18431352-18431418	-12.00	-0.2069	SSBP4	ENST00000270061	In-frame
ENSG00000265415	ENST00000577678	exon_skip_324294	chr2:27774423-27774530	-13.21	-0.1391	MRPL33	ENST00000296102	Frame-shift
ENSG00000265415	ENST00000577678	exon_skip_455363	chr6:161098277-161098427	-15.64	-0.1125	MAP3K4	ENST00000392142	In-frame
ENSG00000265415	ENST00000577678	exon_skip_458825	chr6:34646600-34646798	-15.80	-0.2107	C6orf106	ENST00000374023	In-frame
ENSG00000265415	ENST00000577678	exon_skip_462673	chr6:138926400-138926481	-8.27	-0.1118	REPS1	ENST00000450536	In-frame
ENSG00000265415	ENST00000577678	exon_skip_467017	chr7:74190246-74190306	-6.25	-0.1276	EIF4H	ENST00000265753	In-frame
ENSG00000265415	ENST00000577678	exon_skip_517627	chrX:154357250-154357274	-6.26	-0.3682	FLNA	ENST00000369850	In-frame
ENSG00000265415	ENST00000577678	exon_skip_90104	chr12:10709907-10710114	-16.20	-0.1373	YBX3	ENST00000228251	In-frame
ENSG00000265415	ENST00000577678	exon_skip_346508	chr2:215380810-215381080	-16.30	-0.1116	FN1	ENST00000359671	In-frame
ENSG00000265415	ENST00000577678	exon_skip_430434	chr4:82356536-82356683	-8.43	-0.1016	HNRNPD	ENST00000313899	In-frame
ENSG00000265415	ENST00000577678	exon_skip_29583	chr1:114780109-114780215	-10.24	-0.1249	SIKE1	ENST00000060969	Frame-shift
ENSG00000265415	ENST00000577678	exon_skip_476549	chr7:76013741-76013887	-13.72	-0.1098	STYXL1	ENST00000248600,ENST00000359697,ENST00000431581	Frame-shift
ENSG00000265415	ENST00000577678	exon_skip_430633	chr4:82861630-82861708	-8.09	-0.1526	SEC31A	ENST00000355196,ENST00000395310,ENST00000448323	In-frame
ENSG00000265415	ENST00000577678	exon_skip_29471	chr1:114397939-114397990	-7.41	-0.3529	TRIM33	ENST00000358465	In-frame

-lncRNA and exonskipping events are negatively correlated.

lncRNA and exonskipping events negative correlated

LncRNA Ensembl ID	LncRNA ENST ID	Exon ID	Skipped Exon	dG	ndG	Gene name with skipped exon	TransID with skipped exon	LOF
ENSG00000265415	ENST00000577678	exon_skip_30682	chr1:151310210-151310255	-6.52	-0.1672	PI4KB	ENST00000368873	In-frame
ENSG00000265415	ENST00000577678	exon_skip_111672	chr14:23089981-23090101	-13.56	-0.1343	ACIN1	ENST00000262710	In-frame
ENSG00000265415	ENST00000577678	exon_skip_321184	chr19:50507573-50507699	-14.44	-0.1325	JOSD2	ENST00000598418,ENST00000601423	In-frame
ENSG00000265415	ENST00000577678	exon_skip_1717	chr1:15721328-15721388	-8.14	-0.1565	PLEKHM2	ENST00000375799	In-frame
ENSG00000265415	ENST00000577678	exon_skip_110809	chr14:105449358-105449409	-11.24	-0.2676	MTA1	ENST00000331320	In-frame
ENSG00000265415	ENST00000577678	exon_skip_140283	chr16:635611-635774	-18.34	-0.1207	METTL26	ENST00000301686	Frame-shift
ENSG00000265415	ENST00000577678	exon_skip_302353	chr19:11033766-11033865	-12.83	-0.4277	SMARCA4	ENST00000344626,ENST00000429416	In-frame
ENSG00000265415	ENST00000577678	exon_skip_307316	chr19:40622949-40623021	-11.89	-0.1802	LTBP4	ENST00000308370	In-frame
ENSG00000265415	ENST00000577678	exon_skip_386313	chr3:108051938-108051970	-9.89	-0.3804	CD47	ENST00000361309	Frame-shift
ENSG00000265415	ENST00000577678	exon_skip_430636	chr4:82862533-82862572	-5.47	-0.1954	SEC31A	ENST00000355196,ENST00000395310,ENST00000448323	In-frame

lncRNA targets by miRNA.

LncRNA Ensembl ID	miRNA ID	LncRNA ENST ID	Binding site in lncRNA	Score	Energy	Align Len	Public source
ENSG00000265415	hsa-mir-29c	ENST00000577678	chr17:59202838-59202923	172.00	-68.39	87	NA
ENSG00000265415	hsa-mir-29c	ENST00000577678	chr17:59202737-59202817	160.00	-68.28	88	NA
ENSG00000265415	hsa-mir-26a-1	ENST00000577678	chr17:59202859-59202939	187.00	-67.14	70	NA
ENSG00000265415	hsa-mir-26a-1	ENST00000577678	chr17:59202744-59202822	179.00	-68.42	75	NA
ENSG00000265415	hsa-mir-26a-2	ENST00000577678	chr17:59202804-59202884	190.00	-68.23	75	NA
ENSG00000265415	hsa-mir-26a-2	ENST00000577678	chr17:59202740-59202817	184.00	-69.97	82	NA
ENSG00000265415	hsa-mir-26a-2	ENST00000577678	chr17:59202678-59202737	141.00	-68.88	58	NA
ENSG00000265415	hsa-mir-664a	ENST00000577678	chr17:59202853-59202943	167.00	-59.65	88	NA
ENSG00000265415	hsa-mir-664a	ENST00000577678	chr17:59202747-59202836	154.00	-59.04	79	NA
ENSG00000265415	hsa-mir-101-1	ENST00000577678	chr17:59202821-59202894	179.00	-61.02	71	NA
ENSG00000265415	hsa-mir-101-1	ENST00000577678	chr17:59202678-59202756	155.00	-72.80	75	NA
ENSG00000265415	hsa-mir-101-2	ENST00000577678	chr17:59202738-59202822	173.00	-60.59	76	NA
ENSG00000265415	hsa-mir-101-2	ENST00000577678	chr17:59202825-59202896	166.00	-55.89	76	NA

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Variants for CTD-2510F5.4

RNA A-to-I editing events in lncRNA.

LncRNAediting ID

LncRNA Ensembl ID

Chromosome

Editing Position

Strand

Gene Type

Gene Name

Transcript ID

Transcript Type

Transcript Name

Edited-associated DElncRNAs in cancer.

LncRNA Ensembl ID

LncRNA Index

Cancer Type

Chr_Postion_Strand

AVE1

AVE2

log2FC

W-value

P-value

Adjc.p-value

Change

Correlation between RNA A-to-I editing events's frequecy and lncRNA expression.

LncRNA Ensembl ID

LncRNA Index

Correlation

P-value

Adjc.p-value

Cis-expression quantitative trait loci(cis-eQTL) of lncRNA.

LncRNA Ensembl ID

LncRNA Name

SNP info

Number of Positive corelated Cancer

Positive corelated Cancer

Number of Negative corelated Cancer

Negative corelated Cancer

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lncRNAs regulate the target genes through functioning as enhancers

lncRNA regulates differentially expressed genes by function as enhancer.

LncRNA Ensembl ID

PC Gene ID

PC Gene Name

Positive correlated cancers

Cancer with PC gene up-regulation

Cancer with PC gene down-regulation

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lncRNAs regulate the target genes through recruiting transcript factors

LncRNA-TF complex positively regulates the gene expression by target promoter region (#cancer types with positive correlation >= 5).

lncRNA ID

TF ID

TF Name

PCgene ID

PCgene Name

Number of Cancer

Canaer Types

LncRNA-TF complex negatively regulates the gene expression by target promoter region (#cancer types with negative correlation >= 5).

lncRNA ID

TF ID

TF Name

PCgene ID

PCgene Name

Number of Cancer

Canaer Types

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lncRNAs regulate the alternative splicing event through interacting with splicing factor

LncRNA-RBP complex positively regulates the exon skippping events by target skipped eoxon region.

LncRNA Ensembl ID

RBP ID

RBP Gene Name

Exon Skipping ID

Skipped Exon

EX Gene Name

EX Affected TransID

ORF_anno

Cancer Type

LncRNA-RBP complex negatively regulates the exon skippping events by target skipped eoxon region.

LncRNA Ensembl ID

RBP ID

RBP Gene Name

Exon Skipping ID

Skipped Exon

EX Gene Name

EX Affected TransID

ORF_anno

Cancer Type

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lncRNAs regulate mRNA through targeting the 3'-UTR region

lncRNA regulates differential expressed mRNA by directly targeting 3' UTR region.

LncRNA Ensembl ID	LncRNA ENST ID	PC Gene Name	PC Gene ID	PC ENST ID	dG	nDG	Cancer with PC gene up-regulation	Cancer with PC gene Down-regulation
ENSG00000265415	ENST00000577678	HAGH	ENSG00000063854	ENST00000397356	-0.1406	1	-	GBM,CHOL
ENSG00000265415	ENST00000577678	HAGH	ENSG00000063854	ENST00000455446	-0.1292	1	-	GBM,CHOL
ENSG00000265415	ENST00000577678	HAGH	ENSG00000063854	ENST00000397353	-0.1390	1	-	GBM,CHOL
ENSG00000265415	ENST00000577678	CST3	ENSG00000101439	ENST00000398411	-0.1142	1	-	LUSC
ENSG00000265415	ENST00000577678	PEX11G	ENSG00000104883	ENST00000221480	-0.1283	1	-	CHOL,LIHC
ENSG00000265415	ENST00000577678	PEX11G	ENSG00000104883	ENST00000593942	-0.1283	1	-	CHOL,LIHC
ENSG00000265415	ENST00000577678	PEX11G	ENSG00000104883	ENST00000593547	-0.1283	1	-	CHOL,LIHC
ENSG00000265415	ENST00000577678	ETFB	ENSG00000105379	ENST00000354232	-0.8567	1	-	CHOL
ENSG00000265415	ENST00000577678	ETFB	ENSG00000105379	ENST00000309244	-0.8567	1	-	CHOL
ENSG00000265415	ENST00000577678	ALDH2	ENSG00000111275	ENST00000416293	-0.1745	1	-	GBM,CHOL,BLCA,HNSC,LUSC,BRCA,LUAD,LIHC
ENSG00000265415	ENST00000577678	ALDH2	ENSG00000111275	ENST00000261733	-0.1563	1	-	GBM,CHOL,BLCA,HNSC,LUSC,BRCA,LUAD,LIHC
ENSG00000265415	ENST00000577678	ABHD14B	ENSG00000114779	ENST00000525795	-0.1205	1	-	CHOL
ENSG00000265415	ENST00000577678	BDH2	ENSG00000164039	ENST00000296424	-0.2161	1	-	CHOL,ESCA,LUSC,LIHC,STAD
ENSG00000265415	ENST00000577678	LYRM9	ENSG00000232859	ENST00000508862	-0.1691	1	-	GBM
ENSG00000265415	ENST00000577678	LYRM9	ENSG00000232859	ENST00000379102	-0.2193	1	-	GBM
ENSG00000265415	ENST00000577678	LYRM9	ENSG00000232859	ENST00000503642	-0.3696	25	-	GBM
ENSG00000265415	ENST00000577678	OCEL1	ENSG00000099330	ENST00000600232	-0.1341	31	-	CHOL,COAD
ENSG00000265415	ENST00000577678	OCEL1	ENSG00000099330	ENST00000598068	-0.1251	1	-	CHOL,COAD
ENSG00000265415	ENST00000577678	OCEL1	ENSG00000099330	ENST00000598172	-0.1038	1	-	CHOL,COAD
ENSG00000265415	ENST00000577678	OCEL1	ENSG00000099330	ENST00000599286	-0.1167	1	-	CHOL,COAD
ENSG00000265415	ENST00000577678	OCEL1	ENSG00000099330	ENST00000595573	-0.1308	83	-	CHOL,COAD
ENSG00000265415	ENST00000577678	OCEL1	ENSG00000099330	ENST00000600826	-0.1341	31	-	CHOL,COAD
ENSG00000265415	ENST00000577678	CBX7	ENSG00000100307	ENST00000216133	-0.1019	1	-	GBM,BLCA,CESC,HNSC,UCEC,ESCA,LUSC,BRCA,LUAD,COAD,STAD,READ
ENSG00000265415	ENST00000577678	TOM1L2	ENSG00000175662	ENST00000542206	-0.2158	204	-	GBM,KIRC,UCEC,ESCA,LUSC,LUAD,COAD,STAD,READ
ENSG00000265415	ENST00000577678	STAP2	ENSG00000178078	ENST00000601956	-0.1019	64	-	COAD
ENSG00000265415	ENST00000577678	STAP2	ENSG00000178078	ENST00000598443	-0.1019	64	-	COAD
ENSG00000265415	ENST00000577678	STAP2	ENSG00000178078	ENST00000600324	-0.1019	64	-	COAD
ENSG00000265415	ENST00000577678	STAP2	ENSG00000178078	ENST00000594605	-0.1019	64	-	COAD
ENSG00000265415	ENST00000577678	PLAC9	ENSG00000189129	ENST00000372267	-0.2565	117	-	BLCA,CESC,HNSC,UCEC,ESCA,LUSC,BRCA,LUAD,COAD,STAD,READ
ENSG00000265415	ENST00000577678	CFD	ENSG00000197766	ENST00000327726	-0.1170	1	-	BLCA,HNSC,UCEC,ESCA,LUSC,BRCA,LUAD,COAD,STAD,READ
ENSG00000265415	ENST00000577678	SELENOM	ENSG00000198832	ENST00000402395	-0.1029	42	-	BLCA,CESC,UCEC,STAD
ENSG00000265415	ENST00000577678	SELENOM	ENSG00000198832	ENST00000400299	-0.1029	47	-	BLCA,CESC,UCEC,STAD
ENSG00000265415	ENST00000577678	SELENOM	ENSG00000198832	ENST00000611680	-0.1029	49	-	BLCA,CESC,UCEC,STAD
ENSG00000265415	ENST00000577678	VAMP2	ENSG00000220205	ENST00000488857	-0.4247	20	-	GBM,BLCA,CESC,UCEC,ESCA,LUSC,LUAD,COAD,STAD,READ
ENSG00000265415	ENST00000577678	LIMS2	ENSG00000072163	ENST00000409254	-0.2631	44	-	CHOL,BLCA,CESC,UCEC,ESCA,LUSC,BRCA,LUAD,COAD,STAD,READ
ENSG00000265415	ENST00000577678	MAP1LC3A	ENSG00000101460	ENST00000397709	-0.1052	1	-	GBM,CHOL
ENSG00000265415	ENST00000577678	PTGDS	ENSG00000107317	ENST00000371625	-0.1044	1	-	GBM,KIRC,BLCA,HNSC,UCEC,LUSC,BRCA,LUAD,COAD,STAD,READ
ENSG00000265415	ENST00000577678	PTGDS	ENSG00000107317	ENST00000446677	-0.1817	1	-	GBM,KIRC,BLCA,HNSC,UCEC,LUSC,BRCA,LUAD,COAD,STAD,READ
ENSG00000265415	ENST00000577678	PTGDS	ENSG00000107317	ENST00000444903	-0.1817	1	-	GBM,KIRC,BLCA,HNSC,UCEC,LUSC,BRCA,LUAD,COAD,STAD,READ
ENSG00000265415	ENST00000577678	NPC2	ENSG00000119655	ENST00000434013	-0.1181	135	-	LUSC
ENSG00000265415	ENST00000577678	S1PR4	ENSG00000125910	ENST00000246115	-0.1206	1	-	BLCA,LUSC,LUAD
ENSG00000265415	ENST00000577678	REEP5	ENSG00000129625	ENST00000504247	-0.1777	19	-	GBM
ENSG00000265415	ENST00000577678	RAMP2	ENSG00000131477	ENST00000589683	-0.1237	1	-	CESC,UCEC,LUSC,LUAD
ENSG00000265415	ENST00000577678	RAMP2	ENSG00000131477	ENST00000253796	-0.1237	1	-	CESC,UCEC,LUSC,LUAD
ENSG00000265415	ENST00000577678	ACKR1	ENSG00000213088	ENST00000537147	-0.2635	27	-	BLCA,CESC,HNSC,UCEC,ESCA,LUSC,BRCA,LUAD,COAD,STAD,READ
ENSG00000265415	ENST00000577678	ACKR1	ENSG00000213088	ENST00000368122	-0.2635	25	-	BLCA,CESC,HNSC,UCEC,ESCA,LUSC,BRCA,LUAD,COAD,STAD,READ
ENSG00000265415	ENST00000577678	ACKR1	ENSG00000213088	ENST00000368121	-0.2635	27	-	BLCA,CESC,HNSC,UCEC,ESCA,LUSC,BRCA,LUAD,COAD,STAD,READ
ENSG00000265415	ENST00000577678	POU6F1	ENSG00000184271	ENST00000389243	-0.1204	1	-	GBM,UCEC,ESCA,LUSC,BRCA,STAD
ENSG00000265415	ENST00000577678	PKIG	ENSG00000168734	ENST00000372894	-0.1873	1	-	BLCA,CESC,UCEC,LUSC,LUAD,COAD,STAD
ENSG00000265415	ENST00000577678	PKIG	ENSG00000168734	ENST00000372892	-0.1873	1	-	BLCA,CESC,UCEC,LUSC,LUAD,COAD,STAD
ENSG00000265415	ENST00000577678	PKIG	ENSG00000168734	ENST00000372891	-0.1873	1	-	BLCA,CESC,UCEC,LUSC,LUAD,COAD,STAD
ENSG00000265415	ENST00000577678	PKIG	ENSG00000168734	ENST00000372889	-0.1873	1	-	BLCA,CESC,UCEC,LUSC,LUAD,COAD,STAD
ENSG00000265415	ENST00000577678	PKIG	ENSG00000168734	ENST00000372886	-0.1873	1	-	BLCA,CESC,UCEC,LUSC,LUAD,COAD,STAD
ENSG00000265415	ENST00000577678	PKIG	ENSG00000168734	ENST00000349959	-0.1873	1	-	BLCA,CESC,UCEC,LUSC,LUAD,COAD,STAD
ENSG00000265415	ENST00000577678	DHRS12	ENSG00000102796	ENST00000280056	-0.1002	1	-	CHOL,CESC,LUSC
ENSG00000265415	ENST00000577678	DHRS12	ENSG00000102796	ENST00000461948	-0.2940	1	-	CHOL,CESC,LUSC
ENSG00000265415	ENST00000577678	NOP53	ENSG00000105373	ENST00000246802	-0.2047	48	-	CESC
ENSG00000265415	ENST00000577678	NOP53	ENSG00000105373	ENST00000595143	-0.6483	80	-	CESC
ENSG00000265415	ENST00000577678	NOP53	ENSG00000105373	ENST00000597985	-0.2047	48	-	CESC
ENSG00000265415	ENST00000577678	NOP53	ENSG00000105373	ENST00000598959	-0.2047	48	-	CESC
ENSG00000265415	ENST00000577678	PFDN5	ENSG00000123349	ENST00000551018	-0.1287	21	-	CESC
ENSG00000265415	ENST00000577678	PFDN5	ENSG00000123349	ENST00000351500	-0.1287	21	-	CESC
ENSG00000265415	ENST00000577678	PFDN5	ENSG00000123349	ENST00000550846	-0.1287	21	-	CESC
ENSG00000265415	ENST00000577678	PFDN5	ENSG00000123349	ENST00000334478	-0.1287	21	-	CESC
ENSG00000265415	ENST00000577678	PFDN5	ENSG00000123349	ENST00000549759	-0.1287	24	-	CESC
ENSG00000265415	ENST00000577678	COX7A1	ENSG00000161281	ENST00000437291	-0.2462	116	-	BLCA,CESC,HNSC,UCEC,LUSC,BRCA,LUAD,COAD,STAD,READ
ENSG00000265415	ENST00000577678	COX7A1	ENSG00000161281	ENST00000292907	-0.2462	116	-	BLCA,CESC,HNSC,UCEC,LUSC,BRCA,LUAD,COAD,STAD,READ
ENSG00000265415	ENST00000577678	RILP	ENSG00000167705	ENST00000574810	-0.1032	1	-	CHOL,LUSC,BRCA,COAD,STAD,READ
ENSG00000265415	ENST00000577678	RILP	ENSG00000167705	ENST00000301336	-0.1032	1	-	CHOL,LUSC,BRCA,COAD,STAD,READ
ENSG00000265415	ENST00000577678	LRRN4CL	ENSG00000177363	ENST00000317449	-0.1203	1	-	BLCA,CESC,UCEC,BRCA,COAD,STAD,READ
ENSG00000265415	ENST00000577678	MOB2	ENSG00000182208	ENST00000329957	-0.1043	1	-	CESC
ENSG00000265415	ENST00000577678	FAM167B	ENSG00000183615	ENST00000373582	-0.1042	10	-	CESC,LUSC,LUAD,LIHC
ENSG00000265415	ENST00000577678	SERTAD1	ENSG00000197019	ENST00000357949	-0.1002	1	-	CHOL,BLCA,LUSC,LUAD,LIHC,STAD
ENSG00000265415	ENST00000577678	TMEM54	ENSG00000121900	ENST00000373463	-0.1240	1	-	COAD
ENSG00000265415	ENST00000577678	TMEM54	ENSG00000121900	ENST00000329151	-0.1240	1	-	COAD
ENSG00000265415	ENST00000577678	RAMP3	ENSG00000122679	ENST00000242249	-0.1073	1	-	CESC,LUSC,LUAD
ENSG00000265415	ENST00000577678	RAMP3	ENSG00000122679	ENST00000496212	-0.1367	1	-	CESC,LUSC,LUAD
ENSG00000265415	ENST00000577678	RAMP3	ENSG00000122679	ENST00000481345	-0.1418	14	-	CESC,LUSC,LUAD
ENSG00000265415	ENST00000577678	HCST	ENSG00000126264	ENST00000437550	-0.1524	54	-	LUSC,LUAD
ENSG00000265415	ENST00000577678	GMFG	ENSG00000130755	ENST00000601387	-0.1039	1	-	LUSC,LUAD
ENSG00000265415	ENST00000577678	GMFG	ENSG00000130755	ENST00000597595	-0.1039	1	-	LUSC,LUAD
ENSG00000265415	ENST00000577678	GMFG	ENSG00000130755	ENST00000600322	-0.1039	6	-	LUSC,LUAD
ENSG00000265415	ENST00000577678	GMFG	ENSG00000130755	ENST00000602185	-0.1039	9	-	LUSC,LUAD
ENSG00000265415	ENST00000577678	GMFG	ENSG00000130755	ENST00000253054	-0.1039	9	-	LUSC,LUAD
ENSG00000265415	ENST00000577678	GMFG	ENSG00000130755	ENST00000594700	-0.1039	9	-	LUSC,LUAD
ENSG00000265415	ENST00000577678	SAT2	ENSG00000141504	ENST00000269298	-0.1338	1	-	CHOL,KIRC,CESC,STAD
ENSG00000265415	ENST00000577678	SAT2	ENSG00000141504	ENST00000575826	-0.1033	1	-	CHOL,KIRC,CESC,STAD
ENSG00000265415	ENST00000577678	SAT2	ENSG00000141504	ENST00000573566	-0.1327	155	-	CHOL,KIRC,CESC,STAD
ENSG00000265415	ENST00000577678	RILPL2	ENSG00000150977	ENST00000280571	-0.2067	1	-	CESC,LUSC,LUAD
ENSG00000265415	ENST00000577678	TPSAB1	ENSG00000172236	ENST00000338844	-0.1393	1	-	BLCA,CESC,UCEC,LUSC,LUAD,COAD,STAD,READ
ENSG00000265415	ENST00000577678	TPSAB1	ENSG00000172236	ENST00000461509	-0.1393	1	-	BLCA,CESC,UCEC,LUSC,LUAD,COAD,STAD,READ
ENSG00000265415	ENST00000577678	TPSAB1	ENSG00000172236	ENST00000561736	-0.1393	1	-	BLCA,CESC,UCEC,LUSC,LUAD,COAD,STAD,READ
ENSG00000265415	ENST00000577678	IL3RA	ENSG00000185291	ENST00000331035	-0.1065	60	-	CESC,UCEC,LUSC,LUAD
ENSG00000265415	ENST00000577678	IL3RA	ENSG00000185291	ENST00000381469	-0.1065	56	-	CESC,UCEC,LUSC,LUAD
ENSG00000265415	ENST00000577678	TNFSF12	ENSG00000239697	ENST00000322272	-0.1324	1	-	BLCA,CESC,UCEC,ESCA,LUSC,LUAD,COAD,STAD,READ
ENSG00000265415	ENST00000577678	TOLLIP	ENSG00000078902	ENST00000527938	-0.1020	1	-	GBM,CHOL
ENSG00000265415	ENST00000577678	SLC27A5	ENSG00000083807	ENST00000595851	-0.1094	1	-	CHOL,LIHC
ENSG00000265415	ENST00000577678	SLC27A5	ENSG00000083807	ENST00000594786	-0.1196	1	-	CHOL,LIHC
ENSG00000265415	ENST00000577678	SLC27A5	ENSG00000083807	ENST00000263093	-0.1196	1	-	CHOL,LIHC
ENSG00000265415	ENST00000577678	SLC27A5	ENSG00000083807	ENST00000601355	-0.1195	27	-	CHOL,LIHC
ENSG00000265415	ENST00000577678	CERS4	ENSG00000090661	ENST00000558331	-0.1030	1	-	CHOL,BLCA,STAD
ENSG00000265415	ENST00000577678	CERS4	ENSG00000090661	ENST00000251363	-0.1030	1	-	CHOL,BLCA,STAD
ENSG00000265415	ENST00000577678	CERS4	ENSG00000090661	ENST00000559450	-0.1030	1	-	CHOL,BLCA,STAD
ENSG00000265415	ENST00000577678	CERS4	ENSG00000090661	ENST00000559336	-0.1030	1	-	CHOL,BLCA,STAD
ENSG00000265415	ENST00000577678	FCGRT	ENSG00000104870	ENST00000598319	-0.1123	1	-	CHOL,CESC,LUSC,COAD
ENSG00000265415	ENST00000577678	RARRES2	ENSG00000106538	ENST00000223271	-0.1266	17	-	CHOL,CESC,UCEC,LUSC,BRCA,LUAD,READ
ENSG00000265415	ENST00000577678	RARRES2	ENSG00000106538	ENST00000466675	-0.1577	65	-	CHOL,CESC,UCEC,LUSC,BRCA,LUAD,READ
ENSG00000265415	ENST00000577678	SEPTIN4	ENSG00000108387	ENST00000583114	-0.1648	1	-	GBM,CHOL,LUSC,LUAD
ENSG00000265415	ENST00000577678	SEPTIN4	ENSG00000108387	ENST00000393086	-0.1648	1	-	GBM,CHOL,LUSC,LUAD
ENSG00000265415	ENST00000577678	SEPTIN4	ENSG00000108387	ENST00000317268	-0.1648	1	-	GBM,CHOL,LUSC,LUAD
ENSG00000265415	ENST00000577678	SEPTIN4	ENSG00000108387	ENST00000457347	-0.1648	1	-	GBM,CHOL,LUSC,LUAD
ENSG00000265415	ENST00000577678	SEPTIN4	ENSG00000108387	ENST00000317256	-0.2246	14	-	GBM,CHOL,LUSC,LUAD
ENSG00000265415	ENST00000577678	SEPTIN4	ENSG00000108387	ENST00000412945	-0.2246	14	-	GBM,CHOL,LUSC,LUAD
ENSG00000265415	ENST00000577678	SEPTIN4	ENSG00000108387	ENST00000578131	-0.1022	1	-	GBM,CHOL,LUSC,LUAD
ENSG00000265415	ENST00000577678	VIPR1	ENSG00000114812	ENST00000433647	-0.1169	1	-	CHOL,LUSC,LUAD,COAD
ENSG00000265415	ENST00000577678	VIPR1	ENSG00000114812	ENST00000438259	-0.1169	1	-	CHOL,LUSC,LUAD,COAD
ENSG00000265415	ENST00000577678	VIPR1	ENSG00000114812	ENST00000543411	-0.1169	1	-	CHOL,LUSC,LUAD,COAD
ENSG00000265415	ENST00000577678	VIPR1	ENSG00000114812	ENST00000325123	-0.1169	1	-	CHOL,LUSC,LUAD,COAD
ENSG00000265415	ENST00000577678	VIPR1	ENSG00000114812	ENST00000446673	-0.1510	1	-	CHOL,LUSC,LUAD,COAD
ENSG00000265415	ENST00000577678	ACADS	ENSG00000122971	ENST00000411593	-0.1158	14	-	CHOL,HNSC,ESCA,BRCA,COAD,LIHC,STAD,READ
ENSG00000265415	ENST00000577678	RAB17	ENSG00000124839	ENST00000409576	-0.1220	145	-	CHOL,ESCA,LUSC
ENSG00000265415	ENST00000577678	GAMT	ENSG00000130005	ENST00000447102	-0.1861	1	-	CHOL,HNSC,STAD
ENSG00000265415	ENST00000577678	GAMT	ENSG00000130005	ENST00000591788	-0.6566	1	-	CHOL,HNSC,STAD
ENSG00000265415	ENST00000577678	CYP27A1	ENSG00000135929	ENST00000258415	-0.1022	1	-	CHOL,BLCA,LUSC,LUAD,STAD
ENSG00000265415	ENST00000577678	N4BP2L1	ENSG00000139597	ENST00000380133	-0.1211	155	-	GBM,CHOL,CESC,UCEC,LUSC,BRCA,LUAD,LIHC
ENSG00000265415	ENST00000577678	N4BP2L1	ENSG00000139597	ENST00000495479	-0.2935	16	-	GBM,CHOL,CESC,UCEC,LUSC,BRCA,LUAD,LIHC
ENSG00000265415	ENST00000577678	SERPING1	ENSG00000149131	ENST00000278407	-0.1598	1	-	CHOL,CESC,UCEC,LUSC,BRCA,LUAD,LIHC
ENSG00000265415	ENST00000577678	SERPING1	ENSG00000149131	ENST00000340687	-0.1598	1	-	CHOL,CESC,UCEC,LUSC,BRCA,LUAD,LIHC
ENSG00000265415	ENST00000577678	SERPING1	ENSG00000149131	ENST00000378323	-0.1598	1	-	CHOL,CESC,UCEC,LUSC,BRCA,LUAD,LIHC
ENSG00000265415	ENST00000577678	SERPING1	ENSG00000149131	ENST00000378324	-0.1598	1	-	CHOL,CESC,UCEC,LUSC,BRCA,LUAD,LIHC
ENSG00000265415	ENST00000577678	SERPING1	ENSG00000149131	ENST00000403558	-0.1598	1	-	CHOL,CESC,UCEC,LUSC,BRCA,LUAD,LIHC
ENSG00000265415	ENST00000577678	TM7SF2	ENSG00000149809	ENST00000529601	-0.1013	1	-	CHOL,HNSC,ESCA,STAD
ENSG00000265415	ENST00000577678	TM7SF2	ENSG00000149809	ENST00000345348	-0.1117	1	-	CHOL,HNSC,ESCA,STAD
ENSG00000265415	ENST00000577678	TM7SF2	ENSG00000149809	ENST00000529292	-0.1013	1	-	CHOL,HNSC,ESCA,STAD
ENSG00000265415	ENST00000577678	TM7SF2	ENSG00000149809	ENST00000528802	-0.1481	216	-	CHOL,HNSC,ESCA,STAD
ENSG00000265415	ENST00000577678	DHRS1	ENSG00000157379	ENST00000558340	-0.1026	1	-	CHOL,LIHC,STAD
ENSG00000265415	ENST00000577678	C1R	ENSG00000159403	ENST00000536053	-0.1199	19	-	CHOL,BLCA,UCEC,LIHC
ENSG00000265415	ENST00000577678	C1R	ENSG00000159403	ENST00000535233	-0.1199	19	-	CHOL,BLCA,UCEC,LIHC
ENSG00000265415	ENST00000577678	IL17RC	ENSG00000163702	ENST00000383812	-0.4854	134	-	CHOL
ENSG00000265415	ENST00000577678	IL17RC	ENSG00000163702	ENST00000416074	-0.4854	131	-	CHOL
ENSG00000265415	ENST00000577678	IL17RC	ENSG00000163702	ENST00000412901	-0.1394	1	-	CHOL
ENSG00000265415	ENST00000577678	IL17RC	ENSG00000163702	ENST00000295981	-0.4854	131	-	CHOL
ENSG00000265415	ENST00000577678	IL17RC	ENSG00000163702	ENST00000451231	-0.1053	1	-	CHOL
ENSG00000265415	ENST00000577678	IL17RC	ENSG00000163702	ENST00000403601	-0.2628	88	-	CHOL
ENSG00000265415	ENST00000577678	IL17RC	ENSG00000163702	ENST00000451271	-0.1053	1	-	CHOL
ENSG00000265415	ENST00000577678	IL17RC	ENSG00000163702	ENST00000455057	-0.4854	134	-	CHOL
ENSG00000265415	ENST00000577678	IL17RC	ENSG00000163702	ENST00000413608	-0.2516	135	-	CHOL
ENSG00000265415	ENST00000577678	CLEC3B	ENSG00000163815	ENST00000296130	-0.3147	1	-	CHOL,BLCA,CESC,HNSC,UCEC,ESCA,LUSC,BRCA,LUAD,COAD,STAD,READ
ENSG00000265415	ENST00000577678	CLEC3B	ENSG00000163815	ENST00000428034	-0.3147	1	-	CHOL,BLCA,CESC,HNSC,UCEC,ESCA,LUSC,BRCA,LUAD,COAD,STAD,READ
ENSG00000265415	ENST00000577678	NDRG2	ENSG00000165795	ENST00000557633	-0.1264	6	-	GBM,CHOL,KIRC,HNSC,UCEC,BRCA,LUAD,COAD,LIHC,STAD,READ
ENSG00000265415	ENST00000577678	NDRG2	ENSG00000165795	ENST00000397856	-0.1068	1	-	GBM,CHOL,KIRC,HNSC,UCEC,BRCA,LUAD,COAD,LIHC,STAD,READ
ENSG00000265415	ENST00000577678	NDRG2	ENSG00000165795	ENST00000553593	-0.1864	15	-	GBM,CHOL,KIRC,HNSC,UCEC,BRCA,LUAD,COAD,LIHC,STAD,READ
ENSG00000265415	ENST00000577678	NDRG2	ENSG00000165795	ENST00000555767	-0.1120	10	-	GBM,CHOL,KIRC,HNSC,UCEC,BRCA,LUAD,COAD,LIHC,STAD,READ
ENSG00000265415	ENST00000577678	NDRG2	ENSG00000165795	ENST00000557616	-0.1106	113	-	GBM,CHOL,KIRC,HNSC,UCEC,BRCA,LUAD,COAD,LIHC,STAD,READ
ENSG00000265415	ENST00000577678	CYB5A	ENSG00000166347	ENST00000340533	-0.1885	1	-	CHOL,ESCA,LUSC,LUAD,STAD
ENSG00000265415	ENST00000577678	LDHD	ENSG00000166816	ENST00000300051	-0.1012	1	-	GBM,CHOL,KIRC,HNSC,ESCA,BRCA,COAD,LIHC,STAD,READ
ENSG00000265415	ENST00000577678	LDHD	ENSG00000166816	ENST00000450168	-0.1012	1	-	GBM,CHOL,KIRC,HNSC,ESCA,BRCA,COAD,LIHC,STAD,READ
ENSG00000265415	ENST00000577678	LDHD	ENSG00000166816	ENST00000569876	-0.1449	1	-	GBM,CHOL,KIRC,HNSC,ESCA,BRCA,COAD,LIHC,STAD,READ
ENSG00000265415	ENST00000577678	CTSF	ENSG00000174080	ENST00000310325	-0.1260	1	-	CHOL,BLCA,CESC,UCEC,ESCA,COAD,STAD,READ
ENSG00000265415	ENST00000577678	MSRA	ENSG00000175806	ENST00000441698	-0.2290	37	-	CHOL,KIRC,LUSC,BRCA,LIHC
ENSG00000265415	ENST00000577678	MSRA	ENSG00000175806	ENST00000518255	-1.0050	1	-	CHOL,KIRC,LUSC,BRCA,LIHC
ENSG00000265415	ENST00000577678	OAF	ENSG00000184232	ENST00000531220	-0.1648	1	-	CHOL,CESC,UCEC
ENSG00000265415	ENST00000577678	TXNRD2	ENSG00000184470	ENST00000400519	-0.1239	1	-	CHOL
ENSG00000265415	ENST00000577678	TXNRD2	ENSG00000184470	ENST00000462843	-0.1318	1	-	CHOL
ENSG00000265415	ENST00000577678	ADH1B	ENSG00000196616	ENST00000305046	-0.1367	1	-	CHOL,KIRC,BLCA,UCEC,ESCA,LUSC,BRCA,LUAD,COAD,LIHC,STAD,READ
ENSG00000265415	ENST00000577678	ADH1B	ENSG00000196616	ENST00000625860	-0.1367	1	-	CHOL,KIRC,BLCA,UCEC,ESCA,LUSC,BRCA,LUAD,COAD,LIHC,STAD,READ
ENSG00000265415	ENST00000577678	SLC9A3R2	ENSG00000065054	ENST00000424542	-0.1004	1	-	CHOL,LUSC
ENSG00000265415	ENST00000577678	SLC9A3R2	ENSG00000065054	ENST00000563587	-0.1278	1	-	CHOL,LUSC
ENSG00000265415	ENST00000577678	MARCHF2	ENSG00000099785	ENST00000601283	-0.1374	1	-	STAD,READ
ENSG00000265415	ENST00000577678	FKBP8	ENSG00000105701	ENST00000601844	-0.1037	1	-	GBM
ENSG00000265415	ENST00000577678	FKBP8	ENSG00000105701	ENST00000596015	-0.2393	66	-	GBM
ENSG00000265415	ENST00000577678	FKBP8	ENSG00000105701	ENST00000606531	-0.1499	113	-	GBM
ENSG00000265415	ENST00000577678	VSIR	ENSG00000107738	ENST00000394957	-0.1075	1	-	BLCA,UCEC,LUSC,BRCA,LUAD,COAD,STAD,READ
ENSG00000265415	ENST00000577678	VSIR	ENSG00000107738	ENST00000470317	-0.2808	1	-	BLCA,UCEC,LUSC,BRCA,LUAD,COAD,STAD,READ
ENSG00000265415	ENST00000577678	ABTB1	ENSG00000114626	ENST00000232744	-0.1224	1	-	GBM
ENSG00000265415	ENST00000577678	ABTB1	ENSG00000114626	ENST00000453791	-0.1224	1	-	GBM
ENSG00000265415	ENST00000577678	ABTB1	ENSG00000114626	ENST00000475042	-0.1074	1	-	GBM
ENSG00000265415	ENST00000577678	ABTB1	ENSG00000114626	ENST00000468137	-0.1224	1	-	GBM
ENSG00000265415	ENST00000577678	ABTB1	ENSG00000114626	ENST00000497162	-0.1369	7	-	GBM
ENSG00000265415	ENST00000577678	RRAS	ENSG00000126458	ENST00000246792	-0.1035	1	-	BLCA,CESC,UCEC,LUSC,LUAD,STAD
ENSG00000265415	ENST00000577678	TPRG1L	ENSG00000158109	ENST00000378344	-0.1092	1	-	GBM,CHOL
ENSG00000265415	ENST00000577678	TPRG1L	ENSG00000158109	ENST00000344579	-0.1092	1	-	GBM,CHOL
ENSG00000265415	ENST00000577678	PBXIP1	ENSG00000163346	ENST00000368460	-0.1293	1	-	BLCA,CESC,ESCA,COAD,STAD,READ
ENSG00000265415	ENST00000577678	TMEM88	ENSG00000167874	ENST00000574668	-0.1150	60	-	BLCA,CESC,UCEC,LUSC,BRCA,LUAD
ENSG00000265415	ENST00000577678	TOM1L2	ENSG00000175662	ENST00000581396	-0.1077	1	-	GBM,KIRC,UCEC,ESCA,LUSC,LUAD,COAD,STAD,READ

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lncRNAs regulate mRNA by competing with miRNA

lncRNA regulates mRNA by competing the miRNA binding site with mRNA.

LncRNA Ensembl ID	lncRNA-miRNA-mRNA	Cancer Types
ENSG00000265415	CTD-2510F5.4,hsa-mir-101-1,SPINDOC	CHOL,ACC,MESO,DLBC,LIHC
ENSG00000265415	CTD-2510F5.4,hsa-mir-101-1,SKA1	CHOL,ACC,MESO,DLBC,LIHC
ENSG00000265415	CTD-2510F5.4,hsa-mir-101-1,NCAPG2	CHOL,ACC,MESO,DLBC,LIHC
ENSG00000265415	CTD-2510F5.4,hsa-mir-101-1,SKA3	CHOL,ACC,MESO,DLBC,LIHC
ENSG00000265415	CTD-2510F5.4,hsa-mir-101-1,PRR11	CHOL,ACC,MESO,DLBC,LIHC
ENSG00000265415	CTD-2510F5.4,hsa-mir-101-1,HMMR	CHOL,ACC,MESO,DLBC,LIHC
ENSG00000265415	CTD-2510F5.4,hsa-mir-101-1,ANLN	CHOL,ACC,MESO,DLBC,LIHC
ENSG00000265415	CTD-2510F5.4,hsa-mir-101-1,NCAPH	CHOL,ACC,MESO,DLBC,LIHC
ENSG00000265415	CTD-2510F5.4,hsa-mir-101-1,AURKA	CHOL,ACC,MESO,DLBC,LIHC
ENSG00000265415	CTD-2510F5.4,hsa-mir-101-1,NCAPG	CHOL,ACC,MESO,DLBC,LIHC
ENSG00000265415	CTD-2510F5.4,hsa-mir-101-1,DLGAP5	CHOL,ACC,MESO,DLBC,LIHC
ENSG00000265415	CTD-2510F5.4,hsa-mir-101-1,KPNA2	CHOL,ACC,MESO,DLBC,LIHC
ENSG00000265415	CTD-2510F5.4,hsa-mir-101-1,CDCA5	CHOL,ACC,MESO,DLBC,LIHC
ENSG00000265415	CTD-2510F5.4,hsa-mir-101-1,CKAP4	CHOL,ACC,MESO,DLBC,LIHC
ENSG00000265415	CTD-2510F5.4,hsa-mir-101-1,CHEK1	CHOL,ACC,MESO,DLBC,LIHC
ENSG00000265415	CTD-2510F5.4,hsa-mir-101-1,KCTD5	CHOL,ACC,MESO,DLBC,LIHC
ENSG00000265415	CTD-2510F5.4,hsa-mir-101-1,MAD2L1	CHOL,ACC,MESO,DLBC,LIHC
ENSG00000265415	CTD-2510F5.4,hsa-mir-101-1,EZH2	CHOL,ACC,MESO,DLBC,LIHC
ENSG00000265415	CTD-2510F5.4,hsa-mir-101-1,ERO1A	CHOL,ACC,MESO,DLBC,LIHC
ENSG00000265415	CTD-2510F5.4,hsa-mir-101-1,ZWINT	CHOL,ACC,MESO,DLBC,LIHC
ENSG00000265415	CTD-2510F5.4,hsa-mir-101-1,TPX2	CHOL,ACC,MESO,DLBC,LIHC
ENSG00000265415	CTD-2510F5.4,hsa-mir-101-1,CDK8	CHOL,ACC,MESO,DLBC,LIHC
ENSG00000265415	CTD-2510F5.4,hsa-mir-101-1,CENPF	CHOL,ACC,MESO,DLBC,LIHC
ENSG00000265415	CTD-2510F5.4,hsa-mir-101-1,KIF4A	CHOL,ACC,MESO,DLBC,LIHC
ENSG00000265415	CTD-2510F5.4,hsa-mir-101-1,NUF2	CHOL,ACC,MESO,DLBC,LIHC
ENSG00000265415	CTD-2510F5.4,hsa-mir-101-1,IPO9	CHOL,ACC,MESO,DLBC,LIHC
ENSG00000265415	CTD-2510F5.4,hsa-mir-101-1,BUB1	CHOL,ACC,MESO,DLBC,LIHC
ENSG00000265415	CTD-2510F5.4,hsa-mir-101-1,GPN1	CHOL,ACC,MESO,DLBC,LIHC
ENSG00000265415	CTD-2510F5.4,hsa-mir-101-1,STIP1	CHOL,ACC,MESO,DLBC,LIHC
ENSG00000265415	CTD-2510F5.4,hsa-mir-101-1,TPM4	CHOL,ACC,MESO,DLBC,LIHC
ENSG00000265415	CTD-2510F5.4,hsa-mir-101-1,MELK	CHOL,ACC,MESO,DLBC,LIHC
ENSG00000265415	CTD-2510F5.4,hsa-mir-101-1,PSMD14	CHOL,ACC,MESO,DLBC,LIHC
ENSG00000265415	CTD-2510F5.4,hsa-mir-101-1,CCNF	CHOL,ACC,MESO,DLBC,LIHC
ENSG00000265415	CTD-2510F5.4,hsa-mir-101-1,SAE1	CHOL,ACC,MESO,DLBC,LIHC
ENSG00000265415	CTD-2510F5.4,hsa-mir-101-1,SPC25	CHOL,ACC,MESO,DLBC,LIHC
ENSG00000265415	CTD-2510F5.4,hsa-mir-101-1,PSMD11	CHOL,ACC,MESO,DLBC,LIHC
ENSG00000265415	CTD-2510F5.4,hsa-mir-101-1,GTSE1	CHOL,ACC,MESO,DLBC,LIHC
ENSG00000265415	CTD-2510F5.4,hsa-mir-101-1,ACLY	CHOL,ACC,MESO,DLBC,LIHC
ENSG00000265415	CTD-2510F5.4,hsa-mir-101-1,NKIRAS2	CHOL,ACC,MESO,DLBC,LIHC
ENSG00000265415	CTD-2510F5.4,hsa-mir-101-1,LRRC59	CHOL,ACC,MESO,DLBC,LIHC
ENSG00000265415	CTD-2510F5.4,hsa-mir-101-1,SPARC	CHOL,ACC,MESO,DLBC,LIHC
ENSG00000265415	CTD-2510F5.4,hsa-mir-101-1,CHORDC1	CHOL,ACC,MESO,DLBC,LIHC
ENSG00000265415	CTD-2510F5.4,hsa-mir-101-1,CEP55	CHOL,ACC,MESO,DLBC,LIHC
ENSG00000265415	CTD-2510F5.4,hsa-mir-101-1,ECT2	CHOL,ACC,MESO,DLBC,LIHC
ENSG00000265415	CTD-2510F5.4,hsa-mir-101-1,TOP2A	CHOL,ACC,MESO,DLBC,LIHC
ENSG00000265415	CTD-2510F5.4,hsa-mir-101-1,PLK1	CHOL,ACC,MESO,DLBC,LIHC
ENSG00000265415	CTD-2510F5.4,hsa-mir-101-1,CDC27	CHOL,ACC,MESO,DLBC,LIHC
ENSG00000265415	CTD-2510F5.4,hsa-mir-101-1,EXO1	CHOL,ACC,MESO,DLBC,LIHC
ENSG00000265415	CTD-2510F5.4,hsa-mir-101-1,KIF23	CHOL,ACC,MESO,DLBC,LIHC
ENSG00000265415	CTD-2510F5.4,hsa-mir-101-1,CDCA8	CHOL,ACC,MESO,DLBC,LIHC
ENSG00000265415	CTD-2510F5.4,hsa-mir-101-1,RIT1	CHOL,ACC,MESO,DLBC,LIHC
ENSG00000265415	CTD-2510F5.4,hsa-mir-101-1,KIF18B	CHOL,ACC,MESO,DLBC,LIHC
ENSG00000265415	CTD-2510F5.4,hsa-mir-101-1,MKI67	CHOL,ACC,MESO,DLBC,LIHC
ENSG00000265415	CTD-2510F5.4,hsa-mir-101-1,KIF20A	CHOL,ACC,MESO,DLBC,LIHC
ENSG00000265415	CTD-2510F5.4,hsa-mir-101-1,FOXM1	CHOL,ACC,MESO,DLBC,LIHC
ENSG00000265415	CTD-2510F5.4,hsa-mir-101-1,CKS2	CHOL,ACC,MESO,DLBC,LIHC
ENSG00000265415	CTD-2510F5.4,hsa-mir-101-1,RUSC1	CHOL,ACC,MESO,DLBC,LIHC
ENSG00000265415	CTD-2510F5.4,hsa-mir-101-1,CENPO	CHOL,ACC,MESO,DLBC,LIHC
ENSG00000265415	CTD-2510F5.4,hsa-mir-101-1,RRM2	CHOL,ACC,MESO,DLBC,LIHC
ENSG00000265415	CTD-2510F5.4,hsa-mir-101-1,NEK2	CHOL,ACC,MESO,DLBC,LIHC
ENSG00000265415	CTD-2510F5.4,hsa-mir-664a,NDC80	TGCT,CHOL,ACC,MESO,THYM
ENSG00000265415	CTD-2510F5.4,hsa-mir-664a,RACGAP1	CHOL,ACC,MESO,PAAD,THYM
ENSG00000265415	CTD-2510F5.4,hsa-mir-664a,AURKA	TGCT,CHOL,ACC,MESO,THYM
ENSG00000265415	CTD-2510F5.4,hsa-mir-664a,BIRC5	TGCT,CHOL,ACC,MESO,THYM
ENSG00000265415	CTD-2510F5.4,hsa-mir-664a,PRR11	TGCT,CHOL,ACC,MESO,THYM
ENSG00000265415	CTD-2510F5.4,hsa-mir-664a,MELK	TGCT,CHOL,ACC,MESO,THYM
ENSG00000265415	CTD-2510F5.4,hsa-mir-664a,CENPU	TGCT,CHOL,ACC,MESO,THYM
ENSG00000265415	CTD-2510F5.4,hsa-mir-664a,PLK1	TGCT,CHOL,ACC,MESO,THYM
ENSG00000265415	CTD-2510F5.4,hsa-mir-664a,CENPA	TGCT,CHOL,ACC,MESO,THYM
ENSG00000265415	CTD-2510F5.4,hsa-mir-664a,KIF23	TGCT,CHOL,ACC,PAAD,THYM
ENSG00000265415	CTD-2510F5.4,hsa-mir-664a,CCNA2	TGCT,CHOL,ACC,MESO,THYM
ENSG00000265415	CTD-2510F5.4,hsa-mir-664a,BUB1	TGCT,CHOL,ACC,MESO,THYM
ENSG00000265415	CTD-2510F5.4,hsa-mir-664a,KIF2C	TGCT,CHOL,ACC,MESO,THYM
ENSG00000265415	CTD-2510F5.4,hsa-mir-664a,DLGAP5	TGCT,CHOL,ACC,MESO,THYM
ENSG00000265415	CTD-2510F5.4,hsa-mir-664a,MTMR2	TGCT,CHOL,ACC,PAAD,THYM
ENSG00000265415	CTD-2510F5.4,hsa-mir-664a,RRM2	TGCT,CHOL,ACC,MESO,THYM
ENSG00000265415	CTD-2510F5.4,hsa-mir-664a,PRIM2	TGCT,CHOL,ACC,PAAD,THYM
ENSG00000265415	CTD-2510F5.4,hsa-mir-29c,RECQL4	CHOL,UVM,ACC,MESO,LIHC
ENSG00000265415	CTD-2510F5.4,hsa-mir-29c,NCAPD3	UVM,ACC,MESO,DLBC,LIHC
ENSG00000265415	CTD-2510F5.4,hsa-mir-29c,CFL1	CHOL,UVM,ACC,MESO,LIHC
ENSG00000265415	CTD-2510F5.4,hsa-mir-29c,MCM4	CHOL,UVM,ACC,MESO,DLBC,LIHC
ENSG00000265415	CTD-2510F5.4,hsa-mir-29c,MELK	CHOL,ACC,MESO,DLBC,LIHC
ENSG00000265415	CTD-2510F5.4,hsa-mir-29c,NSD2	CHOL,UVM,MESO,DLBC,LIHC
ENSG00000265415	CTD-2510F5.4,hsa-mir-29c,TOP2A	CHOL,UVM,ACC,MESO,DLBC,LIHC
ENSG00000265415	CTD-2510F5.4,hsa-mir-29c,CHEK1	CHOL,ACC,MESO,DLBC,LIHC
ENSG00000265415	CTD-2510F5.4,hsa-mir-29c,MTMR2	CHOL,ACC,DLBC,PAAD,LIHC
ENSG00000265415	CTD-2510F5.4,hsa-mir-29c,RAD18	CHOL,ACC,MESO,DLBC,LIHC
ENSG00000265415	CTD-2510F5.4,hsa-mir-29c,LAMB1	CHOL,UVM,MESO,DLBC,PAAD
ENSG00000265415	CTD-2510F5.4,hsa-mir-29c,ASF1B	CHOL,UVM,ACC,MESO,DLBC,LIHC
ENSG00000265415	CTD-2510F5.4,hsa-mir-29c,HMGB2	UVM,ACC,MESO,DLBC,LIHC
ENSG00000265415	CTD-2510F5.4,hsa-mir-29c,FAM83D	CHOL,ACC,MESO,DLBC,LIHC
ENSG00000265415	CTD-2510F5.4,hsa-mir-29c,LMNB1	CHOL,UVM,ACC,MESO,DLBC,LIHC
ENSG00000265415	CTD-2510F5.4,hsa-mir-29c,STK25	CHOL,UVM,ACC,MESO,LIHC
ENSG00000265415	CTD-2510F5.4,hsa-mir-29c,UBTD2	CHOL,MESO,DLBC,PAAD,LIHC
ENSG00000265415	CTD-2510F5.4,hsa-mir-29c,TK1	CHOL,UVM,ACC,MESO,LIHC
ENSG00000265415	CTD-2510F5.4,hsa-mir-29c,PRR11	CHOL,ACC,MESO,DLBC,PAAD,LIHC
ENSG00000265415	CTD-2510F5.4,hsa-mir-29c,PRKRA	CHOL,ACC,DLBC,PAAD,LIHC
ENSG00000265415	CTD-2510F5.4,hsa-mir-29c,CENPF	UVM,ACC,MESO,DLBC,LIHC
ENSG00000265415	CTD-2510F5.4,hsa-mir-29c,NRAS	CHOL,ACC,MESO,DLBC,LIHC
ENSG00000265415	CTD-2510F5.4,hsa-mir-29c,KIFC1	CHOL,UVM,ACC,MESO,DLBC,LIHC
ENSG00000265415	CTD-2510F5.4,hsa-mir-29c,POLR2D	CHOL,ACC,MESO,DLBC,LIHC
ENSG00000265415	CTD-2510F5.4,hsa-mir-29c,ECT2	CHOL,MESO,DLBC,PAAD,LIHC
ENSG00000265415	CTD-2510F5.4,hsa-mir-29c,PRC1	CHOL,UVM,ACC,MESO,DLBC,LIHC
ENSG00000265415	CTD-2510F5.4,hsa-mir-29c,NCAPG2	CHOL,ACC,MESO,DLBC,LIHC
ENSG00000265415	CTD-2510F5.4,hsa-mir-29c,AGPS	CHOL,ACC,MESO,DLBC,PAAD,LIHC
ENSG00000265415	CTD-2510F5.4,hsa-mir-29c,CARM1	CHOL,ACC,MESO,DLBC,PAAD,LIHC
ENSG00000265415	CTD-2510F5.4,hsa-mir-29c,BMP1	CHOL,ACC,MESO,DLBC,PAAD
ENSG00000265415	CTD-2510F5.4,hsa-mir-29c,TROAP	CHOL,UVM,ACC,MESO,LIHC
ENSG00000265415	CTD-2510F5.4,hsa-mir-29c,GANAB	CHOL,UVM,ACC,MESO,DLBC
ENSG00000265415	CTD-2510F5.4,hsa-mir-29c,CEP55	CHOL,ACC,MESO,DLBC,PAAD,LIHC
ENSG00000265415	CTD-2510F5.4,hsa-mir-29c,AURKB	CHOL,UVM,ACC,MESO,LIHC
ENSG00000265415	CTD-2510F5.4,hsa-mir-29c,CKAP2L	CHOL,ACC,MESO,DLBC,PAAD
ENSG00000265415	CTD-2510F5.4,hsa-mir-29c,DNMT1	UVM,ACC,MESO,DLBC,LIHC
ENSG00000265415	CTD-2510F5.4,hsa-mir-29c,AURKA	CHOL,UVM,ACC,MESO,DLBC,LIHC
ENSG00000265415	CTD-2510F5.4,hsa-mir-29c,HROB	CHOL,ACC,MESO,DLBC,LIHC
ENSG00000265415	CTD-2510F5.4,hsa-mir-29c,HDAC2	CESC,ACC,MESO,DLBC,LIHC
ENSG00000265415	CTD-2510F5.4,hsa-mir-29c,POLA1	CHOL,UVM,MESO,DLBC,LIHC
ENSG00000265415	CTD-2510F5.4,hsa-mir-29c,ESPL1	CHOL,ACC,MESO,DLBC,LIHC
ENSG00000265415	CTD-2510F5.4,hsa-mir-29c,CKAP4	CHOL,UVM,ACC,MESO,PAAD,LIHC
ENSG00000265415	CTD-2510F5.4,hsa-mir-29c,DBN1	CESC,CHOL,MESO,PAAD,LIHC
ENSG00000265415	CTD-2510F5.4,hsa-mir-29c,RALA	CHOL,MESO,DLBC,PAAD,LIHC
ENSG00000265415	CTD-2510F5.4,hsa-mir-29c,AMMECR1L	ACC,MESO,DLBC,PAAD,LIHC
ENSG00000265415	CTD-2510F5.4,hsa-mir-29c,PCNA	CHOL,UVM,ACC,MESO,DLBC,LIHC
ENSG00000265415	CTD-2510F5.4,hsa-mir-29c,STIP1	CHOL,ACC,MESO,DLBC,LIHC
ENSG00000265415	CTD-2510F5.4,hsa-mir-29c,CENPU	CHOL,UVM,ACC,MESO,LIHC
ENSG00000265415	CTD-2510F5.4,hsa-mir-29c,RRM2	CHOL,UVM,ACC,MESO,DLBC,LIHC
ENSG00000265415	CTD-2510F5.4,hsa-mir-29c,FOXM1	CHOL,UVM,ACC,MESO,DLBC,LIHC
ENSG00000265415	CTD-2510F5.4,hsa-mir-29c,FAM111B	CHOL,ACC,MESO,DLBC,LIHC
ENSG00000265415	CTD-2510F5.4,hsa-mir-29c,LIG1	UVM,ACC,MESO,DLBC,LIHC
ENSG00000265415	CTD-2510F5.4,hsa-mir-29c,PSMD11	CHOL,UVM,ACC,DLBC,LIHC
ENSG00000265415	CTD-2510F5.4,hsa-mir-29c,FANCI	CHOL,UVM,ACC,MESO,DLBC,LIHC
ENSG00000265415	CTD-2510F5.4,hsa-mir-29c,PLK1	UVM,ACC,MESO,DLBC,LIHC
ENSG00000265415	CTD-2510F5.4,hsa-mir-29c,CAD	CHOL,UVM,ACC,DLBC,LIHC
ENSG00000265415	CTD-2510F5.4,hsa-mir-29c,CHAF1A	CHOL,UVM,ACC,MESO,DLBC,LIHC
ENSG00000265415	CTD-2510F5.4,hsa-mir-29c,CDCA8	CHOL,UVM,ACC,MESO,DLBC,LIHC
ENSG00000265415	CTD-2510F5.4,hsa-mir-29c,GINS1	CHOL,ACC,MESO,DLBC,LIHC
ENSG00000265415	CTD-2510F5.4,hsa-mir-29c,CDK1	CHOL,UVM,ACC,MESO,DLBC,LIHC
ENSG00000265415	CTD-2510F5.4,hsa-mir-29c,MMP14	CHOL,UVM,ACC,MESO,DLBC,PAAD
ENSG00000265415	CTD-2510F5.4,hsa-mir-29c,RCC2	CHOL,UVM,ACC,MESO,DLBC,PAAD,LIHC
ENSG00000265415	CTD-2510F5.4,hsa-mir-29c,ITGA5	UVM,MESO,DLBC,PAAD,LIHC
ENSG00000265415	CTD-2510F5.4,hsa-mir-29c,BUB1	CHOL,UVM,ACC,MESO,DLBC,LIHC
ENSG00000265415	CTD-2510F5.4,hsa-mir-29c,CORO1C	CHOL,MESO,DLBC,PAAD,LIHC
ENSG00000265415	CTD-2510F5.4,hsa-mir-29c,CALU	CHOL,UVM,MESO,DLBC,PAAD,LIHC
ENSG00000265415	CTD-2510F5.4,hsa-mir-29c,KIF4A	CHOL,ACC,MESO,DLBC,LIHC
ENSG00000265415	CTD-2510F5.4,hsa-mir-29c,SMPD4	CHOL,ACC,MESO,DLBC,LIHC
ENSG00000265415	CTD-2510F5.4,hsa-mir-29c,NT5DC2	CHOL,ACC,MESO,PAAD,LIHC
ENSG00000265415	CTD-2510F5.4,hsa-mir-29c,TUBA1C	CHOL,UVM,MESO,DLBC,PAAD,LIHC
ENSG00000265415	CTD-2510F5.4,hsa-mir-29c,CD276	CHOL,UVM,MESO,PAAD,LIHC
ENSG00000265415	CTD-2510F5.4,hsa-mir-29c,SPAG5	CHOL,UVM,ACC,MESO,DLBC,LIHC
ENSG00000265415	CTD-2510F5.4,hsa-mir-29c,GTF3C2	CHOL,UVM,ACC,DLBC,LIHC
ENSG00000265415	CTD-2510F5.4,hsa-mir-29c,TYMS	CHOL,UVM,ACC,MESO,DLBC,LIHC
ENSG00000265415	CTD-2510F5.4,hsa-mir-29c,MCM8	CHOL,ACC,MESO,DLBC,LIHC
ENSG00000265415	CTD-2510F5.4,hsa-mir-29c,SH3GL1	CHOL,UVM,ACC,MESO,PAAD,LIHC
ENSG00000265415	CTD-2510F5.4,hsa-mir-29c,TUBA1B	CHOL,UVM,MESO,DLBC,PAAD,LIHC
ENSG00000265415	CTD-2510F5.4,hsa-mir-29c,TMEM237	CHOL,ACC,MESO,DLBC,PAAD
ENSG00000265415	CTD-2510F5.4,hsa-mir-29c,RNF26	CHOL,ACC,MESO,DLBC,LIHC
ENSG00000265415	CTD-2510F5.4,hsa-mir-29c,XXYLT1	CHOL,ACC,MESO,PAAD,LIHC
ENSG00000265415	CTD-2510F5.4,hsa-mir-29c,COL4A1	CESC,CHOL,UVM,MESO,DLBC,PAAD
ENSG00000265415	CTD-2510F5.4,hsa-mir-29c,TUBB	CHOL,ACC,DLBC,PAAD,LIHC
ENSG00000265415	CTD-2510F5.4,hsa-mir-29c,UBE2C	CHOL,UVM,ACC,MESO,LIHC
ENSG00000265415	CTD-2510F5.4,hsa-mir-29c,SERPINH1	CHOL,UVM,ACC,MESO,DLBC,PAAD
ENSG00000265415	CTD-2510F5.4,hsa-mir-29c,EZH2	CHOL,ACC,MESO,DLBC,LIHC
ENSG00000265415	CTD-2510F5.4,hsa-mir-29c,DSCC1	UVM,ACC,MESO,DLBC,LIHC
ENSG00000265415	CTD-2510F5.4,hsa-mir-29c,BUB1B	CHOL,ACC,MESO,DLBC,LIHC
ENSG00000265415	CTD-2510F5.4,hsa-mir-29c,COL4A2	CHOL,UVM,MESO,DLBC,PAAD
ENSG00000265415	CTD-2510F5.4,hsa-mir-29c,NKIRAS2	CHOL,ACC,MESO,PAAD,LIHC
ENSG00000265415	CTD-2510F5.4,hsa-mir-29c,TUBG1	CHOL,UVM,ACC,MESO,DLBC,LIHC
ENSG00000265415	CTD-2510F5.4,hsa-mir-29c,GTSE1	CHOL,UVM,ACC,MESO,DLBC,LIHC
ENSG00000265415	CTD-2510F5.4,hsa-mir-29c,CENPO	CHOL,UVM,ACC,MESO,DLBC,LIHC
ENSG00000265415	CTD-2510F5.4,hsa-mir-29c,POGLUT2	CHOL,ACC,MESO,DLBC,PAAD,LIHC
ENSG00000265415	CTD-2510F5.4,hsa-mir-29c,RFC5	CHOL,ACC,MESO,DLBC,LIHC
ENSG00000265415	CTD-2510F5.4,hsa-mir-29c,PTK7	CHOL,ACC,MESO,DLBC,PAAD,LIHC
ENSG00000265415	CTD-2510F5.4,hsa-mir-29c,DTYMK	CHOL,UVM,ACC,MESO,LIHC
ENSG00000265415	CTD-2510F5.4,hsa-mir-29c,PKMYT1	CHOL,UVM,ACC,MESO,LIHC
ENSG00000265415	CTD-2510F5.4,hsa-mir-29c,KIF11	CHOL,UVM,ACC,MESO,DLBC,LIHC
ENSG00000265415	CTD-2510F5.4,hsa-mir-29c,MYO19	CHOL,UVM,ACC,MESO,DLBC,LIHC
ENSG00000265415	CTD-2510F5.4,hsa-mir-29c,NCAPH	CHOL,ACC,MESO,DLBC,LIHC
ENSG00000265415	CTD-2510F5.4,hsa-mir-29c,FANCG	CHOL,ACC,MESO,DLBC,LIHC
ENSG00000265415	CTD-2510F5.4,hsa-mir-29c,DLGAP5	CHOL,ACC,MESO,DLBC,LIHC
ENSG00000265415	CTD-2510F5.4,hsa-mir-29c,MCM3	CHOL,ACC,MESO,DLBC,LIHC
ENSG00000265415	CTD-2510F5.4,hsa-mir-29c,CKAP5	CHOL,MESO,DLBC,PAAD,LIHC
ENSG00000265415	CTD-2510F5.4,hsa-mir-29c,ZWINT	CHOL,UVM,ACC,MESO,DLBC,LIHC
ENSG00000265415	CTD-2510F5.4,hsa-mir-29c,ACLY	CHOL,UVM,MESO,DLBC,LIHC
ENSG00000265415	CTD-2510F5.4,hsa-mir-29c,CDC6	CHOL,ACC,MESO,DLBC,LIHC
ENSG00000265415	CTD-2510F5.4,hsa-mir-29c,NREP	CESC,CHOL,ACC,MESO,PAAD,LIHC
ENSG00000265415	CTD-2510F5.4,hsa-mir-29c,SPC25	CHOL,ACC,MESO,DLBC,LIHC
ENSG00000265415	CTD-2510F5.4,hsa-mir-29c,DONSON	CHOL,ACC,MESO,DLBC,LIHC
ENSG00000265415	CTD-2510F5.4,hsa-mir-29c,NCAPG	CHOL,ACC,MESO,DLBC,LIHC
ENSG00000265415	CTD-2510F5.4,hsa-mir-29c,RCC1	CHOL,UVM,MESO,DLBC,LIHC
ENSG00000265415	CTD-2510F5.4,hsa-mir-29c,CENPA	CHOL,ACC,MESO,DLBC,LIHC
ENSG00000265415	CTD-2510F5.4,hsa-mir-29c,PTBP1	CHOL,ACC,MESO,DLBC,LIHC
ENSG00000265415	CTD-2510F5.4,hsa-mir-29c,CDC25C	CHOL,ACC,MESO,DLBC,LIHC
ENSG00000265415	CTD-2510F5.4,hsa-mir-29c,TIMELESS	CHOL,UVM,ACC,MESO,DLBC,LIHC
ENSG00000265415	CTD-2510F5.4,hsa-mir-29c,SKA3	CHOL,ACC,MESO,DLBC,LIHC
ENSG00000265415	CTD-2510F5.4,hsa-mir-29c,NDC80	CHOL,ACC,MESO,DLBC,LIHC
ENSG00000265415	CTD-2510F5.4,hsa-mir-29c,RACGAP1	CHOL,UVM,ACC,MESO,DLBC,LIHC
ENSG00000265415	CTD-2510F5.4,hsa-mir-29c,FEN1	CHOL,UVM,ACC,MESO,DLBC,LIHC
ENSG00000265415	CTD-2510F5.4,hsa-mir-29c,H2AX	CHOL,UVM,ACC,MESO,LIHC
ENSG00000265415	CTD-2510F5.4,hsa-mir-29c,CDCA4	ACC,MESO,DLBC,PAAD,LIHC
ENSG00000265415	CTD-2510F5.4,hsa-mir-29c,ATAD2	UVM,ACC,MESO,DLBC,LIHC
ENSG00000265415	CTD-2510F5.4,hsa-mir-29c,PRKDC	CHOL,UVM,MESO,DLBC,LIHC
ENSG00000265415	CTD-2510F5.4,hsa-mir-29c,SPARC	UVM,ACC,MESO,DLBC,PAAD
ENSG00000265415	CTD-2510F5.4,hsa-mir-29c,ZDHHC5	CHOL,UVM,ACC,DLBC,PAAD
ENSG00000265415	CTD-2510F5.4,hsa-mir-29c,MKI67	CHOL,UVM,ACC,MESO,DLBC,LIHC
ENSG00000265415	CTD-2510F5.4,hsa-mir-29c,LMNB2	CHOL,ACC,MESO,DLBC,PAAD,LIHC
ENSG00000265415	CTD-2510F5.4,hsa-mir-29c,YWHAQ	CHOL,UVM,ACC,DLBC,LIHC
ENSG00000265415	CTD-2510F5.4,hsa-mir-29c,BIRC5	CHOL,UVM,ACC,MESO,LIHC
ENSG00000265415	CTD-2510F5.4,hsa-mir-29c,KIF20A	CHOL,UVM,ACC,MESO,DLBC,PAAD,LIHC
ENSG00000265415	CTD-2510F5.4,hsa-mir-29c,CDCA5	CHOL,UVM,ACC,MESO,DLBC,LIHC
ENSG00000265415	CTD-2510F5.4,hsa-mir-29c,KPNB1	CHOL,ACC,MESO,DLBC,LIHC
ENSG00000265415	CTD-2510F5.4,hsa-mir-29c,LRRC59	CHOL,UVM,ACC,MESO,DLBC
ENSG00000265415	CTD-2510F5.4,hsa-mir-29c,PPIC	CHOL,UVM,MESO,PAAD,LIHC
ENSG00000265415	CTD-2510F5.4,hsa-mir-29c,P3H4	CHOL,UVM,MESO,PAAD,LIHC
ENSG00000265415	CTD-2510F5.4,hsa-mir-29c,RFC2	CHOL,UVM,ACC,MESO,LIHC
ENSG00000265415	CTD-2510F5.4,hsa-mir-29c,MCM2	CHOL,ACC,MESO,DLBC,LIHC
ENSG00000265415	CTD-2510F5.4,hsa-mir-29c,NUSAP1	CHOL,UVM,MESO,DLBC,LIHC
ENSG00000265415	CTD-2510F5.4,hsa-mir-29c,KIF23	CHOL,ACC,MESO,DLBC,PAAD,LIHC
ENSG00000265415	CTD-2510F5.4,hsa-mir-29c,C1QTNF6	CHOL,UVM,MESO,PAAD,LIHC
ENSG00000265415	CTD-2510F5.4,hsa-mir-29c,TEDC2	CHOL,UVM,ACC,MESO,LIHC
ENSG00000265415	CTD-2510F5.4,hsa-mir-29c,MCM6	CHOL,UVM,ACC,MESO,DLBC,LIHC
ENSG00000265415	CTD-2510F5.4,hsa-mir-29c,PPP4R1	CHOL,ACC,DLBC,PAAD,LIHC
ENSG00000265415	CTD-2510F5.4,hsa-mir-29c,KIF2C	CHOL,UVM,ACC,MESO,DLBC,LIHC
ENSG00000265415	CTD-2510F5.4,hsa-mir-29c,CCNB2	CHOL,UVM,ACC,MESO,LIHC
ENSG00000265415	CTD-2510F5.4,hsa-mir-29c,CDC45	CHOL,UVM,ACC,MESO,LIHC
ENSG00000265415	CTD-2510F5.4,hsa-mir-29c,UBE2E3	CHOL,ACC,MESO,PAAD,LIHC
ENSG00000265415	CTD-2510F5.4,hsa-mir-29c,TARBP2	CHOL,UVM,ACC,MESO,LIHC
ENSG00000265415	CTD-2510F5.4,hsa-mir-29c,PBK	CHOL,ACC,MESO,DLBC,LIHC
ENSG00000265415	CTD-2510F5.4,hsa-mir-29c,ANKRD52	CHOL,UVM,MESO,DLBC,LIHC
ENSG00000265415	CTD-2510F5.4,hsa-mir-29c,KNSTRN	CHOL,ACC,MESO,DLBC,LIHC
ENSG00000265415	CTD-2510F5.4,hsa-mir-29c,MCU	CHOL,UVM,ACC,MESO,DLBC,LIHC
ENSG00000265415	CTD-2510F5.4,hsa-mir-29c,SSRP1	CHOL,ACC,MESO,DLBC,LIHC
ENSG00000265415	CTD-2510F5.4,hsa-mir-29c,CCT5	CHOL,UVM,MESO,DLBC,PAAD,LIHC
ENSG00000265415	CTD-2510F5.4,hsa-mir-29c,ARHGAP11A	CHOL,ACC,MESO,DLBC,LIHC
ENSG00000265415	CTD-2510F5.4,hsa-mir-29c,SRSF9	CHOL,UVM,MESO,DLBC,LIHC
ENSG00000265415	CTD-2510F5.4,hsa-mir-29c,TPX2	CHOL,UVM,ACC,MESO,DLBC,LIHC
ENSG00000265415	CTD-2510F5.4,hsa-mir-29c,DTL	CHOL,ACC,MESO,DLBC,LIHC
ENSG00000265415	CTD-2510F5.4,hsa-mir-29c,UHRF1	CHOL,ACC,MESO,DLBC,PAAD,LIHC
ENSG00000265415	CTD-2510F5.4,hsa-mir-29c,COLGALT1	CHOL,UVM,ACC,MESO,PAAD,LIHC
ENSG00000265415	CTD-2510F5.4,hsa-mir-29c,P3H1	UVM,ACC,MESO,PAAD,LIHC
ENSG00000265415	CTD-2510F5.4,hsa-mir-101-2,SKA1	CHOL,ACC,MESO,DLBC,LIHC
ENSG00000265415	CTD-2510F5.4,hsa-mir-101-2,NCAPG	CHOL,ACC,MESO,DLBC,LIHC
ENSG00000265415	CTD-2510F5.4,hsa-mir-101-2,KPNA2	CHOL,ACC,MESO,DLBC,LIHC
ENSG00000265415	CTD-2510F5.4,hsa-mir-101-2,CDCA5	CHOL,ACC,MESO,DLBC,LIHC
ENSG00000265415	CTD-2510F5.4,hsa-mir-101-2,CKAP4	CHOL,ACC,MESO,DLBC,LIHC
ENSG00000265415	CTD-2510F5.4,hsa-mir-101-2,EZH2	CHOL,ACC,MESO,DLBC,LIHC
ENSG00000265415	CTD-2510F5.4,hsa-mir-101-2,ERO1A	CHOL,ACC,MESO,DLBC,LIHC
ENSG00000265415	CTD-2510F5.4,hsa-mir-101-2,SPC25	CHOL,ACC,MESO,DLBC,LIHC
ENSG00000265415	CTD-2510F5.4,hsa-mir-101-2,GTSE1	CHOL,ACC,MESO,DLBC,LIHC
ENSG00000265415	CTD-2510F5.4,hsa-mir-101-2,NKIRAS2	CHOL,ACC,MESO,DLBC,LIHC
ENSG00000265415	CTD-2510F5.4,hsa-mir-101-2,CHORDC1	CHOL,ACC,MESO,DLBC,LIHC
ENSG00000265415	CTD-2510F5.4,hsa-mir-101-2,KIF23	CHOL,ACC,MESO,DLBC,LIHC
ENSG00000265415	CTD-2510F5.4,hsa-mir-101-2,RIT1	CHOL,ACC,MESO,DLBC,LIHC
ENSG00000265415	CTD-2510F5.4,hsa-mir-101-2,CKS2	CHOL,ACC,MESO,DLBC,LIHC
ENSG00000265415	CTD-2510F5.4,hsa-mir-101-2,PRR11	CHOL,ACC,MESO,DLBC,LIHC
ENSG00000265415	CTD-2510F5.4,hsa-mir-101-2,KCTD5	CHOL,ACC,MESO,DLBC,LIHC
ENSG00000265415	CTD-2510F5.4,hsa-mir-101-2,CHEK1	CHOL,ACC,MESO,DLBC,LIHC
ENSG00000265415	CTD-2510F5.4,hsa-mir-101-2,ZWINT	CHOL,ACC,MESO,DLBC,LIHC
ENSG00000265415	CTD-2510F5.4,hsa-mir-101-2,TPX2	CHOL,ACC,MESO,DLBC,LIHC
ENSG00000265415	CTD-2510F5.4,hsa-mir-101-2,BUB1	CHOL,ACC,MESO,DLBC,LIHC
ENSG00000265415	CTD-2510F5.4,hsa-mir-101-2,STIP1	CHOL,ACC,MESO,DLBC,LIHC
ENSG00000265415	CTD-2510F5.4,hsa-mir-101-2,TPM4	CHOL,ACC,MESO,DLBC,LIHC
ENSG00000265415	CTD-2510F5.4,hsa-mir-101-2,MELK	CHOL,ACC,MESO,DLBC,LIHC
ENSG00000265415	CTD-2510F5.4,hsa-mir-101-2,CCNF	CHOL,ACC,MESO,DLBC,LIHC
ENSG00000265415	CTD-2510F5.4,hsa-mir-101-2,SAE1	CHOL,ACC,MESO,DLBC,LIHC
ENSG00000265415	CTD-2510F5.4,hsa-mir-101-2,TOP2A	CHOL,ACC,MESO,DLBC,LIHC
ENSG00000265415	CTD-2510F5.4,hsa-mir-101-2,EXO1	CHOL,ACC,MESO,DLBC,LIHC
ENSG00000265415	CTD-2510F5.4,hsa-mir-101-2,CENPO	CHOL,ACC,MESO,DLBC,LIHC
ENSG00000265415	CTD-2510F5.4,hsa-mir-101-2,NCAPG2	CHOL,ACC,MESO,DLBC,LIHC
ENSG00000265415	CTD-2510F5.4,hsa-mir-101-2,SKA3	CHOL,ACC,MESO,DLBC,LIHC
ENSG00000265415	CTD-2510F5.4,hsa-mir-101-2,MAD2L1	CHOL,ACC,MESO,DLBC,LIHC
ENSG00000265415	CTD-2510F5.4,hsa-mir-101-2,PRC1	CHOL,ACC,MESO,DLBC,LIHC
ENSG00000265415	CTD-2510F5.4,hsa-mir-101-2,CDK8	CHOL,ACC,MESO,DLBC,LIHC
ENSG00000265415	CTD-2510F5.4,hsa-mir-101-2,KIF4A	CHOL,ACC,MESO,DLBC,LIHC
ENSG00000265415	CTD-2510F5.4,hsa-mir-101-2,IPO9	CHOL,ACC,MESO,DLBC,LIHC
ENSG00000265415	CTD-2510F5.4,hsa-mir-101-2,GPN1	CHOL,ACC,MESO,DLBC,LIHC
ENSG00000265415	CTD-2510F5.4,hsa-mir-101-2,PSMD11	CHOL,ACC,MESO,DLBC,LIHC
ENSG00000265415	CTD-2510F5.4,hsa-mir-101-2,SPARC	CHOL,ACC,MESO,DLBC,LIHC
ENSG00000265415	CTD-2510F5.4,hsa-mir-101-2,CEP55	CHOL,ACC,MESO,DLBC,LIHC
ENSG00000265415	CTD-2510F5.4,hsa-mir-101-2,ECT2	CHOL,ACC,MESO,DLBC,LIHC
ENSG00000265415	CTD-2510F5.4,hsa-mir-101-2,CDCA8	CHOL,ACC,MESO,DLBC,LIHC
ENSG00000265415	CTD-2510F5.4,hsa-mir-101-2,KIF18B	CHOL,ACC,MESO,DLBC,LIHC
ENSG00000265415	CTD-2510F5.4,hsa-mir-101-2,MKI67	CHOL,ACC,MESO,DLBC,LIHC
ENSG00000265415	CTD-2510F5.4,hsa-mir-101-2,KIF20A	CHOL,ACC,MESO,DLBC,LIHC
ENSG00000265415	CTD-2510F5.4,hsa-mir-101-2,RUSC1	CHOL,ACC,MESO,DLBC,LIHC
ENSG00000265415	CTD-2510F5.4,hsa-mir-101-2,SPINDOC	CHOL,ACC,MESO,DLBC,LIHC
ENSG00000265415	CTD-2510F5.4,hsa-mir-101-2,HMMR	CHOL,ACC,MESO,DLBC,LIHC
ENSG00000265415	CTD-2510F5.4,hsa-mir-101-2,ANLN	CHOL,ACC,MESO,DLBC,LIHC
ENSG00000265415	CTD-2510F5.4,hsa-mir-101-2,NCAPH	CHOL,ACC,MESO,DLBC,LIHC
ENSG00000265415	CTD-2510F5.4,hsa-mir-101-2,AURKA	CHOL,ACC,MESO,DLBC,LIHC
ENSG00000265415	CTD-2510F5.4,hsa-mir-101-2,CENPF	CHOL,ACC,MESO,DLBC,LIHC
ENSG00000265415	CTD-2510F5.4,hsa-mir-101-2,ACLY	CHOL,ACC,MESO,DLBC,LIHC
ENSG00000265415	CTD-2510F5.4,hsa-mir-101-2,LRRC59	CHOL,ACC,MESO,DLBC,LIHC
ENSG00000265415	CTD-2510F5.4,hsa-mir-101-2,PLK1	CHOL,ACC,MESO,DLBC,LIHC
ENSG00000265415	CTD-2510F5.4,hsa-mir-101-2,CDC27	CHOL,ACC,MESO,DLBC,LIHC
ENSG00000265415	CTD-2510F5.4,hsa-mir-101-2,FOXM1	CHOL,ACC,MESO,DLBC,LIHC
ENSG00000265415	CTD-2510F5.4,hsa-mir-101-2,RRM2	CHOL,ACC,MESO,DLBC,LIHC
ENSG00000265415	CTD-2510F5.4,hsa-mir-101-2,NEK2	CHOL,ACC,MESO,DLBC,LIHC

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lncRNA coding potential

ORFfinder result for the gencode.v22.lncRNA.transcript.fa.

lncRNA Ensembl ID	lncRNA ENST ID	length(AA)	start at transcript	end at transcript
ENSG00000265415.1	ENST00000577678.1	139	255	674

	lncRNA summary
	lncRNA structure and expression level
	lncRNA-Protein interaction
	lncRNA-DNA interaction
	lncRNA-RNA interaction
	Variants in lncRNA
	lncRNAs regulate the target genes through functioning as enhancers
	lncRNAs regulate the target genes through recruiting transcript factors
	lncRNAs regulate the alternative splicing events through interacting with splicing factor
	lncRNAs regulate mRNA through targeting the 3'-UTR region
	lncRNAs regulate mRNA by competing with miRNA
	lncRNA coding potential