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Center for Computational Systems Medicine
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lncRNA summary

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lncRNA structure and expression level

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lncRNA-Protein interaction

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lncRNA-DNA interaction

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lncRNA-RNA interaction

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Variants in lncRNA

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lncRNAs regulate the target genes through functioning as enhancers

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lncRNAs regulate the target genes through recruiting transcript factors

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lncRNAs regulate the alternative splicing events through interacting with splicing factor

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lncRNAs regulate mRNA through targeting the 3'-UTR region

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lncRNAs regulate mRNA by competing with miRNA

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lncRNA coding potential

lncRNA: ENSG00000264112

Summary for RP11-159D12.2

check button Gene summary

Gene informationEnsembl ID

ENSG00000264112

Gene symbol

RP11-159D12.2

Gene name
HGNC
Entrez ID
Gene typelincRNA
Synonyms
UniProtAcc

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Structure and expression level for RP11-159D12.2

check buttonAS events and RNA A-to-I editing events of lncRNA in TCGA based on Genvode V22 structure.
UCSC result

check buttonDifferentially expressed gene analysis between cancer and normal samples.
DEG result
Ensembl IDBase meanlog2FC(AD/control)lfcSEStatP-valueAdjc.p-valueDEG direction Cancer type
ENSG000002641124.880865e+021.596991e+002.976278e-015.365731e+008.060000e-086.530000e-07UPCHOL
ENSG000002641125.577708e+021.646718e+001.413119e-011.165307e+012.210000e-312.410000e-30UPKIRC
ENSG000002641126.780372e+021.411055e+002.194668e-016.429470e+001.280000e-101.010000e-09UPKIRP
ENSG000002641126.170705e+021.012142e+001.651500e-016.128621e+008.860000e-103.970000e-09UPLUAD
ENSG000002641124.974298e+021.447908e+001.957623e-017.396255e+001.400000e-131.110000e-12UPCOAD
ENSG000002641124.004201e+021.064115e+003.181807e-013.344374e+008.246840e-044.763788e-03UPREAD

check buttonCorrelation between lncRNAs and cancer stages.
LncRNA Ensembl IDCorrelationP-valueCancer TypeAdjc.p-value
ENSG000002641125.868525e-012.265374e-05CHOL1.107663e-04

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lncRNA-Protein interaction for RP11-159D12.2

lncrna_protein
check buttonlncRNA-epigenetic factor interaction (#cancer types with positive correlation >= 5).
Epi result
LncRNA Ensembl IDLncRNA ENST IDLncRNA NameProtein Ensembl IDProtein NameCatRAPID ScoreLncpro ScoreUniPortIDGene SubtypePublic source
ENSG00000264112ENST00000577267RP11-159D12.2ENSG00000118058KMT2A105.8796.7896Q03164TF,EpiNA
ENSG00000264112ENST00000577267RP11-159D12.2ENSG00000101126ADNP95.5990.1956Q9H2P0TF,EpiNA
ENSG00000264112ENST00000585065RP11-159D12.2ENSG00000118058KMT2A92.2397.9312Q03164TF,EpiNA
ENSG00000264112ENST00000577267RP11-159D12.2ENSG00000104885DOT1L89.6494.0922Q8TEK3TF,EpiNA
ENSG00000264112ENST00000585065RP11-159D12.2ENSG00000101126ADNP85.5795.0772Q9H2P0TF,EpiNA
ENSG00000264112ENST00000577267RP11-159D12.2ENSG00000140396NCOA283.1791.821Q15596TF,EpiNA
ENSG00000264112ENST00000577267RP11-159D12.2ENSG00000187605TET382.4494.8077O43151TF,EpiNA
ENSG00000264112ENST00000577267RP11-159D12.2ENSG00000171634BPTF82.2695.8766Q12830TF,EpiNA
ENSG00000264112ENST00000585065RP11-159D12.2ENSG00000104885DOT1L81.2696.0245Q8TEK3TF,EpiNA
ENSG00000264112ENST00000585065RP11-159D12.2ENSG00000116731PRDM280.6696.3651Q13029TF,EpiNA
ENSG00000264112ENST00000585065RP11-159D12.2ENSG00000036549ZZZ377.4494.8419Q8IYH5TF,EpiNA
ENSG00000264112ENST00000585065RP11-159D12.2ENSG00000140396NCOA275.8993.2231Q15596TF,EpiNA
ENSG00000264112ENST00000585065RP11-159D12.2ENSG00000171634BPTF75.8497.2874Q12830TF,EpiNA
ENSG00000264112ENST00000585065RP11-159D12.2ENSG00000187605TET373.4395.8668O43151TF,EpiNA
ENSG00000264112ENST00000585065RP11-159D12.2ENSG00000272333KMT2B59.3196.0422Q9UMN6TF,EpiNA
ENSG00000264112ENST00000585065RP11-159D12.2ENSG00000169057MECP239.5792.7527P51608TF,EpiNA
ENSG00000264112ENST00000585065RP11-159D12.2ENSG00000083544TDRD336.3395.1892Q9H7E2RBP,EpiNA
ENSG00000264112ENST00000577267RP11-159D12.2ENSG00000083544TDRD332.2694.841Q9H7E2RBP,EpiNA
ENSG00000264112ENST00000585065RP11-159D12.2ENSG00000139154AEBP229.5994.0511Q6ZN18TF,EpiNA
ENSG00000264112ENST00000585065RP11-159D12.2ENSG00000172273HINFP24.1892.3205Q9BQA5TF,EpiNA
ENSG00000264112ENST00000585065RP11-159D12.2ENSG00000112511PHF120.8293.3438O43189TF,EpiNA
ENSG00000264112ENST00000585065RP11-159D12.2ENSG00000141644MBD114.2793.7132Q9UIS9TF,EpiNA
ENSG00000264112ENST00000585065RP11-159D12.2ENSG00000143033MTF212.5393.1263Q9Y483TF,EpiNA
ENSG00000264112ENST00000582096RP11-159D12.2ENSG00000118058KMT2A64.5696.6369Q03164TF,EpiNA
ENSG00000264112ENST00000582096RP11-159D12.2ENSG00000116731PRDM257.4492.2351Q13029TF,EpiNA
ENSG00000264112ENST00000582096RP11-159D12.2ENSG00000187605TET351.0292.3525O43151TF,EpiNA
ENSG00000264112ENST00000582096RP11-159D12.2ENSG00000104885DOT1L47.5793.1218Q8TEK3TF,EpiNA
ENSG00000264112ENST00000582096RP11-159D12.2ENSG00000171634BPTF47.3596.5648Q12830TF,EpiNA
ENSG00000264112ENST00000582096RP11-159D12.2ENSG00000272333KMT2B35.6394.493Q9UMN6TF,EpiNA
ENSG00000264112ENST00000577267RP11-159D12.2ENSG00000123636BAZ2B131.7496.0624Q9UIF8TF,EpiNA
ENSG00000264112ENST00000585065RP11-159D12.2ENSG00000123636BAZ2B114.3697.317Q9UIF8TF,EpiNA
ENSG00000264112ENST00000577267RP11-159D12.2ENSG00000104517UBR5103.293.5333O95071RBP,EpiNA
ENSG00000264112ENST00000577267RP11-159D12.2ENSG00000116539ASH1L95.9296.1918Q9NR48TF,EpiNA
ENSG00000264112ENST00000585065RP11-159D12.2ENSG00000162601MYSM194.9593.9628Q5VVJ2TF,EpiNA
ENSG00000264112ENST00000585065RP11-159D12.2ENSG00000104517UBR594.3495.0991O95071RBP,EpiNA
ENSG00000264112ENST00000577267RP11-159D12.2ENSG00000012048BRCA187.3695.003P38398RBP,EpiNA
ENSG00000264112ENST00000585065RP11-159D12.2ENSG00000116539ASH1L86.1395.4198Q9NR48TF,EpiNA
ENSG00000264112ENST00000577267RP11-159D12.2ENSG00000168769TET281.3795.8486Q6N021TF,EpiNA
ENSG00000264112ENST00000585065RP11-159D12.2ENSG00000012048BRCA178.8196.4733P38398RBP,EpiNA
ENSG00000264112ENST00000585065RP11-159D12.2ENSG00000168769TET272.8396.9267Q6N021TF,EpiNA
ENSG00000264112ENST00000585065RP11-159D12.2ENSG00000138376BARD172.5594.331Q99728RBP,EpiNA
ENSG00000264112ENST00000585065RP11-159D12.2ENSG00000189079ARID266.1894.5399Q68CP9TF,EpiNA
ENSG00000264112ENST00000585065RP11-159D12.2ENSG00000116560SFPQ47.4293.5794P23246RBP,EpiNA
ENSG00000264112ENST00000585065RP11-159D12.2ENSG00000197114ZGPAT33.0792.7607Q8N5A5TF,EpiNA
ENSG00000264112ENST00000585065RP11-159D12.2ENSG00000115966ATF225.1491.6981P15336TF,EpiNA
ENSG00000264112ENST00000585065RP11-159D12.2ENSG00000277258PCGF224.7491.2935P35227TF,EpiNA
ENSG00000264112ENST00000585065RP11-159D12.2ENSG00000136450SRSF115.892.6733Q07955RBP,EpiNA
ENSG00000264112ENST00000585065RP11-159D12.2ENSG00000136504KAT713.9190.6838O95251TF,EpiNA
ENSG00000264112ENST00000582096RP11-159D12.2ENSG00000123636BAZ2B79.6893.8106Q9UIF8TF,EpiNA
ENSG00000264112ENST00000582096RP11-159D12.2ENSG00000104517UBR558.891.8055O95071RBP,EpiNA
ENSG00000264112ENST00000582096RP11-159D12.2ENSG00000162601MYSM155.6790.6709Q5VVJ2TF,EpiNA
ENSG00000264112ENST00000582096RP11-159D12.2ENSG00000116539ASH1L54.9490.4303Q9NR48TF,EpiNA
ENSG00000264112ENST00000582096RP11-159D12.2ENSG00000138376BARD150.5491.4367Q99728RBP,EpiNA
ENSG00000264112ENST00000582096RP11-159D12.2ENSG00000168769TET244.094.4641Q6N021TF,EpiNA
ENSG00000264112ENST00000582096RP11-159D12.2ENSG00000136504KAT78.2491.3268O95251TF,EpiNA

check buttonlncRNA-transcript factor interaction (#cancer types with positive correlation >= 5).
TF result
LncRNA Ensembl IDLncRNA ENST IDLncRNA NameProtein Ensembl IDProtein NameCatRAPID ScoreLncpro ScoreUniPortIDGene SubtypePublic source
ENSG00000264112ENST00000577267RP11-159D12.2ENSG00000102189EEA1132.5796.0174Q15075TFNA
ENSG00000264112ENST00000577267RP11-159D12.2ENSG00000123636BAZ2B131.7496.2415Q9UIF8TF,EpiNA
ENSG00000264112ENST00000585065RP11-159D12.2ENSG00000102189EEA1116.2497.0466Q15075TFNA
ENSG00000264112ENST00000585065RP11-159D12.2ENSG00000123636BAZ2B114.3697.3847Q9UIF8TF,EpiNA
ENSG00000264112ENST00000577267RP11-159D12.2ENSG00000118058KMT2A105.8796.898Q03164TF,EpiNA
ENSG00000264112ENST00000577267RP11-159D12.2ENSG00000167967E4F1105.4194.5806Q66K89TFNA
ENSG00000264112ENST00000585065RP11-159D12.2ENSG00000102908NFAT5103.7490.5958O94916TFNA
ENSG00000264112ENST00000577267RP11-159D12.2ENSG00000130254SAFB2101.6396.2475Q14151TF,RBPENCODE
ENSG00000264112ENST00000577267RP11-159D12.2ENSG00000100207TCF2097.7595.9275Q9UGU0TFNA
ENSG00000264112ENST00000577267RP11-159D12.2ENSG00000181827RFX796.6994.382Q2KHR2TFNA
ENSG00000264112ENST00000577267RP11-159D12.2ENSG00000116539ASH1L95.9296.2657Q9NR48TF,EpiNA
ENSG00000264112ENST00000577267RP11-159D12.2ENSG00000101126ADNP95.5990.4853Q9H2P0TF,EpiNA
ENSG00000264112ENST00000585065RP11-159D12.2ENSG00000162601MYSM194.9594.1352Q5VVJ2TF,EpiNA
ENSG00000264112ENST00000585065RP11-159D12.2ENSG00000167967E4F194.3495.0446Q66K89TFNA
ENSG00000264112ENST00000585065RP11-159D12.2ENSG00000118058KMT2A92.2398.0098Q03164TF,EpiNA
ENSG00000264112ENST00000577267RP11-159D12.2ENSG00000196867ZFP2892.2192.976Q8NHY6TFNA
ENSG00000264112ENST00000577267RP11-159D12.2ENSG00000099326MZF190.6892.4658P28698TFNA
ENSG00000264112ENST00000577267RP11-159D12.2ENSG00000104885DOT1L89.6494.3464Q8TEK3TF,EpiNA
ENSG00000264112ENST00000585065RP11-159D12.2ENSG00000080298RFX388.7593.0837P48380TFNA
ENSG00000264112ENST00000585065RP11-159D12.2ENSG00000130254SAFB288.2296.7434Q14151TF,RBPENCODE
ENSG00000264112ENST00000585065RP11-159D12.2ENSG00000181827RFX786.8793.8564Q2KHR2TFNA
ENSG00000264112ENST00000585065RP11-159D12.2ENSG00000116539ASH1L86.1395.5187Q9NR48TF,EpiNA
ENSG00000264112ENST00000585065RP11-159D12.2ENSG00000101126ADNP85.5795.2813Q9H2P0TF,EpiNA
ENSG00000264112ENST00000585065RP11-159D12.2ENSG00000100207TCF2085.5597.1632Q9UGU0TFNA
ENSG00000264112ENST00000577267RP11-159D12.2ENSG00000005889ZFX85.494.6074P17010TFNA
ENSG00000264112ENST00000577267RP11-159D12.2ENSG00000140396NCOA283.1792.1821Q15596TF,EpiNA
ENSG00000264112ENST00000577267RP11-159D12.2ENSG00000147124ZNF4182.9894.6466P51814TFNA
ENSG00000264112ENST00000577267RP11-159D12.2ENSG00000187605TET382.4494.9608O43151TF,EpiNA
ENSG00000264112ENST00000577267RP11-159D12.2ENSG00000171634BPTF82.2696.029Q12830TF,EpiNA
ENSG00000264112ENST00000577267RP11-159D12.2ENSG00000105127AKAP882.2595.0907O43823TFNA
ENSG00000264112ENST00000577267RP11-159D12.2ENSG00000168769TET281.3796.0203Q6N021TF,EpiNA
ENSG00000264112ENST00000585065RP11-159D12.2ENSG00000124782RREB181.2794.771Q92766TFNA
ENSG00000264112ENST00000585065RP11-159D12.2ENSG00000104885DOT1L81.2696.1715Q8TEK3TF,EpiNA
ENSG00000264112ENST00000585065RP11-159D12.2ENSG00000116731PRDM280.6696.3923Q13029TF,EpiNA
ENSG00000264112ENST00000585065RP11-159D12.2ENSG00000196867ZFP2880.4495.3349Q8NHY6TFNA
ENSG00000264112ENST00000585065RP11-159D12.2ENSG00000099326MZF180.0694.747P28698TFNA
ENSG00000264112ENST00000577267RP11-159D12.2ENSG00000070476ZXDC77.690.5132Q2QGD7TFNA
ENSG00000264112ENST00000585065RP11-159D12.2ENSG00000036549ZZZ377.4494.9968Q8IYH5TF,EpiNA
ENSG00000264112ENST00000585065RP11-159D12.2ENSG00000005889ZFX76.9495.6793P17010TFNA
ENSG00000264112ENST00000585065RP11-159D12.2ENSG00000140396NCOA275.8993.4022Q15596TF,EpiNA
ENSG00000264112ENST00000585065RP11-159D12.2ENSG00000171634BPTF75.8497.3926Q12830TF,EpiNA
ENSG00000264112ENST00000577267RP11-159D12.2ENSG00000167232ZNF9175.3495.4833Q05481TFNA
ENSG00000264112ENST00000577267RP11-159D12.2ENSG00000198521ZNF4373.6894.3761P17038TFNA
ENSG00000264112ENST00000585065RP11-159D12.2ENSG00000187605TET373.4396.0122O43151TF,EpiNA
ENSG00000264112ENST00000585065RP11-159D12.2ENSG00000147124ZNF4172.995.884P51814TFNA
ENSG00000264112ENST00000585065RP11-159D12.2ENSG00000168769TET272.8397.0272Q6N021TF,EpiNA
ENSG00000264112ENST00000577267RP11-159D12.2ENSG00000100105PATZ172.4890.8436Q9HBE1TFNA
ENSG00000264112ENST00000585065RP11-159D12.2ENSG00000140836ZFHX370.9897.5002Q15911TFNA
ENSG00000264112ENST00000585065RP11-159D12.2ENSG00000105127AKAP870.296.0518O43823TFNA
ENSG00000264112ENST00000585065RP11-159D12.2ENSG00000070476ZXDC68.7892.1721Q2QGD7TFNA
ENSG00000264112ENST00000577267RP11-159D12.2ENSG00000196670ZFP6268.3491.3438Q8NB50TFNA
ENSG00000264112ENST00000585065RP11-159D12.2ENSG00000167232ZNF9168.0696.6104Q05481TFNA
ENSG00000264112ENST00000585065RP11-159D12.2ENSG00000198521ZNF4367.8395.3747P17038TFNA
ENSG00000264112ENST00000577267RP11-159D12.2ENSG00000117000RLF67.6396.3927Q13129TFNA
ENSG00000264112ENST00000585065RP11-159D12.2ENSG00000189079ARID266.1894.6791Q68CP9TF,EpiNA
ENSG00000264112ENST00000585065RP11-159D12.2ENSG00000100105PATZ165.7790.587Q9HBE1TFNA
ENSG00000264112ENST00000585065RP11-159D12.2ENSG00000196670ZFP6263.2795.5971Q8NB50TFNA
ENSG00000264112ENST00000577267RP11-159D12.2ENSG00000126804ZBTB163.2295.2301Q9Y2K1TFNA
ENSG00000264112ENST00000585065RP11-159D12.2ENSG00000126804ZBTB163.195.7068Q9Y2K1TFNA
ENSG00000264112ENST00000577267RP11-159D12.2ENSG00000114439BBX62.2291.2988Q8WY36TFNA
ENSG00000264112ENST00000585065RP11-159D12.2ENSG00000117000RLF60.4497.2784Q13129TFNA
ENSG00000264112ENST00000585065RP11-159D12.2ENSG00000114439BBX59.9994.3722Q8WY36TFNA
ENSG00000264112ENST00000585065RP11-159D12.2ENSG00000272333KMT2B59.3196.1858Q9UMN6TF,EpiNA
ENSG00000264112ENST00000585065RP11-159D12.2ENSG00000146587RBAK58.9194.9506Q9NYW8TFNA
ENSG00000264112ENST00000577267RP11-159D12.2ENSG00000146587RBAK58.8893.8537Q9NYW8TFNA
ENSG00000264112ENST00000577267RP11-159D12.2ENSG00000140836ZFHX357.6796.3757Q15911TFNA
ENSG00000264112ENST00000577267RP11-159D12.2ENSG00000170448NFXL157.2993.3105Q6ZNB6TFNA
ENSG00000264112ENST00000577267RP11-159D12.2ENSG00000198040ZNF8457.1894.7797P51523TFNA
ENSG00000264112ENST00000577267RP11-159D12.2ENSG00000147789ZNF756.4294.0303P17097TFNA
ENSG00000264112ENST00000585065RP11-159D12.2ENSG00000198040ZNF8453.2595.7279P51523TFNA
ENSG00000264112ENST00000585065RP11-159D12.2ENSG00000147789ZNF751.9294.8369P17097TFNA
ENSG00000264112ENST00000585065RP11-159D12.2ENSG00000170448NFXL149.1595.0176Q6ZNB6TFNA
ENSG00000264112ENST00000585065RP11-159D12.2ENSG00000172845SP345.1690.7317Q02447TFNA
ENSG00000264112ENST00000585065RP11-159D12.2ENSG00000198815FOXJ344.0494.3391Q9UPW0TFNA
ENSG00000264112ENST00000585065RP11-159D12.2ENSG00000168795ZBTB543.7894.7078O15062TFNA
ENSG00000264112ENST00000577267RP11-159D12.2ENSG00000168795ZBTB543.3995.3953O15062TFNA
ENSG00000264112ENST00000577267RP11-159D12.2ENSG00000164631ZNF1243.2393.2121P17014TFNA
ENSG00000264112ENST00000585065RP11-159D12.2ENSG00000164631ZNF1242.8194.5583P17014TFNA
ENSG00000264112ENST00000585065RP11-159D12.2ENSG00000186272ZNF1741.3195.4351P17021TFNA
ENSG00000264112ENST00000577267RP11-159D12.2ENSG00000198815FOXJ340.893.2012Q9UPW0TFNA
ENSG00000264112ENST00000577267RP11-159D12.2ENSG00000166432ZMAT139.9193.7156Q5H9K5TFNA
ENSG00000264112ENST00000585065RP11-159D12.2ENSG00000169057MECP239.5792.9426P51608TF,EpiNA
ENSG00000264112ENST00000585065RP11-159D12.2ENSG00000166432ZMAT137.9994.6893Q5H9K5TFNA
ENSG00000264112ENST00000577267RP11-159D12.2ENSG00000186272ZNF1737.2894.2426P17021TFNA
ENSG00000264112ENST00000585065RP11-159D12.2ENSG00000141568FOXK235.0491.673Q01167TFNA
ENSG00000264112ENST00000585065RP11-159D12.2ENSG00000197857ZNF4433.4795.3363P15621TFNA
ENSG00000264112ENST00000585065RP11-159D12.2ENSG00000112592TBP33.4391.1441P20226TFNA
ENSG00000264112ENST00000585065RP11-159D12.2ENSG00000197114ZGPAT33.0793.3072Q8N5A5TF,EpiNA
ENSG00000264112ENST00000585065RP11-159D12.2ENSG00000196233LCOR32.9293.4492Q96JN0TFNA
ENSG00000264112ENST00000577267RP11-159D12.2ENSG00000062194GPBP130.4491.9041Q86WP2TFNA
ENSG00000264112ENST00000585065RP11-159D12.2ENSG00000184939ZFP9030.1895.3488Q8TF47TFNA
ENSG00000264112ENST00000585065RP11-159D12.2ENSG00000187815ZFP6930.1494.2469Q49AA0TFNA
ENSG00000264112ENST00000585065RP11-159D12.2ENSG00000139154AEBP229.5994.3926Q6ZN18TF,EpiNA
ENSG00000264112ENST00000585065RP11-159D12.2ENSG00000168661ZNF3028.9895.0057P17039TFNA
ENSG00000264112ENST00000585065RP11-159D12.2ENSG00000062194GPBP128.7394.6766Q86WP2TFNA
ENSG00000264112ENST00000585065RP11-159D12.2ENSG00000180787ZFP328.493.934Q96NJ6TFNA
ENSG00000264112ENST00000585065RP11-159D12.2ENSG00000166526ZNF327.5594.2855P17036TFNA
ENSG00000264112ENST00000585065RP11-159D12.2ENSG00000187792ZNF7026.6794.1784Q9UC06TFNA
ENSG00000264112ENST00000585065RP11-159D12.2ENSG00000213928IRF926.3290.289Q00978TFNA
ENSG00000264112ENST00000585065RP11-159D12.2ENSG00000065029ZNF7626.1493.7961P36508TFNA
ENSG00000264112ENST00000585065RP11-159D12.2ENSG00000115966ATF225.1492.3535P15336TF,EpiNA
ENSG00000264112ENST00000585065RP11-159D12.2ENSG00000277258PCGF224.7491.7036P35227TF,EpiNA
ENSG00000264112ENST00000585065RP11-159D12.2ENSG00000172273HINFP24.1892.5702Q9BQA5TF,EpiNA
ENSG00000264112ENST00000585065RP11-159D12.2ENSG00000142065ZFP1423.8994.3899Q9HCL3TFNA
ENSG00000264112ENST00000585065RP11-159D12.2ENSG00000120784ZFP3022.6794.8023Q9Y2G7TFNA
ENSG00000264112ENST00000585065RP11-159D12.2ENSG00000154957ZNF1822.1293.6704P17022TFNA
ENSG00000264112ENST00000585065RP11-159D12.2ENSG00000144161ZC3H822.092.9506Q8N5P1TF,RBPNA
ENSG00000264112ENST00000577267RP11-159D12.2ENSG00000184939ZFP9021.893.6852Q8TF47TFNA
ENSG00000264112ENST00000585065RP11-159D12.2ENSG00000167766ZNF8321.0294.461P51522TFNA
ENSG00000264112ENST00000585065RP11-159D12.2ENSG00000102901CENPT20.8490.5922Q96BT3TFNA
ENSG00000264112ENST00000585065RP11-159D12.2ENSG00000112511PHF120.8293.5727O43189TF,EpiNA
ENSG00000264112ENST00000577267RP11-159D12.2ENSG00000187792ZNF7020.6793.2131Q9UC06TFNA
ENSG00000264112ENST00000577267RP11-159D12.2ENSG00000144161ZC3H820.5790.4288Q8N5P1TF,RBPNA
ENSG00000264112ENST00000577267RP11-159D12.2ENSG00000166526ZNF320.4492.3905P17036TFNA
ENSG00000264112ENST00000585065RP11-159D12.2ENSG00000117036ETV320.4391.9798P41162TFNA
ENSG00000264112ENST00000585065RP11-159D12.2ENSG00000170653ATF720.3590.8396P17544TFNA
ENSG00000264112ENST00000585065RP11-159D12.2ENSG00000250571GLI420.1692.9196P10075TFNA
ENSG00000264112ENST00000585065RP11-159D12.2ENSG00000186130ZBTB619.992.0033Q15916TFNA
ENSG00000264112ENST00000585065RP11-159D12.2ENSG00000109381ELF219.890.6703Q15723TFNA
ENSG00000264112ENST00000585065RP11-159D12.2ENSG00000204304PBX219.6291.992P40425TFNA
ENSG00000264112ENST00000577267RP11-159D12.2ENSG00000197857ZNF4419.694.1745P15621TFNA
ENSG00000264112ENST00000577267RP11-159D12.2ENSG00000168661ZNF3019.192.4992P17039TFNA
ENSG00000264112ENST00000577267RP11-159D12.2ENSG00000142065ZFP1418.6992.6386Q9HCL3TFNA
ENSG00000264112ENST00000585065RP11-159D12.2ENSG00000256223ZNF1018.5694.5562P21506TFNA
ENSG00000264112ENST00000577267RP11-159D12.2ENSG00000065029ZNF7618.2992.8049P36508TFNA
ENSG00000264112ENST00000585065RP11-159D12.2ENSG00000198939ZFP217.7293.4993Q6ZN57TFNA
ENSG00000264112ENST00000585065RP11-159D12.2ENSG00000178177LCORL17.7293.0278Q8N3X6TFNA
ENSG00000264112ENST00000577267RP11-159D12.2ENSG00000167766ZNF8317.6591.9729P51522TFNA
ENSG00000264112ENST00000585065RP11-159D12.2ENSG00000123411IKZF417.5891.0094Q9H2S9TFNA
ENSG00000264112ENST00000577267RP11-159D12.2ENSG00000187815ZFP6917.2793.4232Q49AA0TFNA
ENSG00000264112ENST00000585065RP11-159D12.2ENSG00000146757ZNF9216.2994.9875Q03936TFNA
ENSG00000264112ENST00000577267RP11-159D12.2ENSG00000180787ZFP315.7591.2651Q96NJ6TFNA
ENSG00000264112ENST00000585065RP11-159D12.2ENSG00000196378ZNF3415.6695.5215Q8IZ26TFNA
ENSG00000264112ENST00000577267RP11-159D12.2ENSG00000198429ZNF6915.592.6628Q9UC07TFNA
ENSG00000264112ENST00000585065RP11-159D12.2ENSG00000278129ZNF815.495.1302P17098TFNA
ENSG00000264112ENST00000577267RP11-159D12.2ENSG00000120784ZFP3014.5693.7277Q9Y2G7TFNA
ENSG00000264112ENST00000585065RP11-159D12.2ENSG00000198429ZNF6914.3694.7815Q9UC07TFNA
ENSG00000264112ENST00000585065RP11-159D12.2ENSG00000141644MBD114.2793.9887Q9UIS9TF,EpiNA
ENSG00000264112ENST00000585065RP11-159D12.2ENSG00000136504KAT713.9190.7911O95251TF,EpiNA
ENSG00000264112ENST00000577267RP11-159D12.2ENSG00000256223ZNF1013.4692.8457P21506TFNA
ENSG00000264112ENST00000577267RP11-159D12.2ENSG00000154957ZNF1812.7691.6298P17022TFNA
ENSG00000264112ENST00000585065RP11-159D12.2ENSG00000143033MTF212.5393.2697Q9Y483TF,EpiNA
ENSG00000264112ENST00000577267RP11-159D12.2ENSG00000186130ZBTB611.4491.4333Q15916TFNA
ENSG00000264112ENST00000577267RP11-159D12.2ENSG00000278129ZNF810.3593.9924P17098TFNA
ENSG00000264112ENST00000577267RP11-159D12.2ENSG00000198939ZFP28.591.476Q6ZN57TFNA
ENSG00000264112ENST00000577267RP11-159D12.2ENSG00000146757ZNF926.2794.0925Q03936TFNA
ENSG00000264112ENST00000577267RP11-159D12.2ENSG00000196378ZNF345.9395.1538Q8IZ26TFNA
ENSG00000264112ENST00000582096RP11-159D12.2ENSG00000123636BAZ2B79.6893.7842Q9UIF8TF,EpiNA
ENSG00000264112ENST00000582096RP11-159D12.2ENSG00000102189EEA175.8294.1089Q15075TFNA
ENSG00000264112ENST00000582096RP11-159D12.2ENSG00000118058KMT2A64.5696.6341Q03164TF,EpiNA
ENSG00000264112ENST00000582096RP11-159D12.2ENSG00000116731PRDM257.4492.2622Q13029TF,EpiNA
ENSG00000264112ENST00000582096RP11-159D12.2ENSG00000079432CIC56.8392.252Q96RK0TFNA
ENSG00000264112ENST00000582096RP11-159D12.2ENSG00000100207TCF2056.5294.6621Q9UGU0TFNA
ENSG00000264112ENST00000582096RP11-159D12.2ENSG00000162601MYSM155.6790.7099Q5VVJ2TF,EpiNA
ENSG00000264112ENST00000582096RP11-159D12.2ENSG00000181827RFX755.2991.5373Q2KHR2TFNA
ENSG00000264112ENST00000582096RP11-159D12.2ENSG00000116539ASH1L54.9490.4462Q9NR48TF,EpiNA
ENSG00000264112ENST00000582096RP11-159D12.2ENSG00000187605TET351.0292.3833O43151TF,EpiNA
ENSG00000264112ENST00000582096RP11-159D12.2ENSG00000147124ZNF4148.0392.5776P51814TFNA
ENSG00000264112ENST00000582096RP11-159D12.2ENSG00000104885DOT1L47.5793.1281Q8TEK3TF,EpiNA
ENSG00000264112ENST00000582096RP11-159D12.2ENSG00000171634BPTF47.3596.5508Q12830TF,EpiNA
ENSG00000264112ENST00000582096RP11-159D12.2ENSG00000167232ZNF9145.1792.0172Q05481TFNA
ENSG00000264112ENST00000582096RP11-159D12.2ENSG00000168769TET244.094.5581Q6N021TF,EpiNA
ENSG00000264112ENST00000582096RP11-159D12.2ENSG00000140836ZFHX343.0994.3988Q15911TFNA
ENSG00000264112ENST00000582096RP11-159D12.2ENSG00000196670ZFP6240.1492.4669Q8NB50TFNA
ENSG00000264112ENST00000582096RP11-159D12.2ENSG00000117000RLF38.8893.3731Q13129TFNA
ENSG00000264112ENST00000582096RP11-159D12.2ENSG00000114439BBX37.2291.1142Q8WY36TFNA
ENSG00000264112ENST00000582096RP11-159D12.2ENSG00000257315ZBED636.0490.5677P86452TFNA
ENSG00000264112ENST00000582096RP11-159D12.2ENSG00000272333KMT2B35.6394.5073Q9UMN6TF,EpiNA
ENSG00000264112ENST00000582096RP11-159D12.2ENSG00000168795ZBTB530.191.9119O15062TFNA
ENSG00000264112ENST00000582096RP11-159D12.2ENSG00000186272ZNF1726.8690.5024P17021TFNA
ENSG00000264112ENST00000582096RP11-159D12.2ENSG00000184939ZFP9019.3590.6061Q8TF47TFNA
ENSG00000264112ENST00000582096RP11-159D12.2ENSG00000167766ZNF8310.2391.166P51522TFNA
ENSG00000264112ENST00000582096RP11-159D12.2ENSG00000136504KAT78.2491.2452O95251TF,EpiNA

check buttonlncRNA-RNA binding protein interaction (#cancer types with positive correlation >= 5).
RBP result
LncRNA Ensembl IDLncRNA ENST IDLncRNA NameProtein Ensembl IDProtein NameCatRAPID ScoreLncpro ScoreUniPortIDGene SubtypePublic source
ENSG00000264112ENST00000582096RP11-159D12.2ENSG00000004534RBM660.9893.9656P78332RBPNA
ENSG00000264112ENST00000582096RP11-159D12.2ENSG00000104517UBR558.891.7814O95071RBP,EpiNA
ENSG00000264112ENST00000582096RP11-159D12.2ENSG00000213079SCAF857.3596.0791Q9UPN6RBPNA
ENSG00000264112ENST00000582096RP11-159D12.2ENSG00000198000NOL853.8193.7488Q76FK4RBPNA
ENSG00000264112ENST00000582096RP11-159D12.2ENSG00000106344RBM2853.2792.5233Q9NW13RBPNA
ENSG00000264112ENST00000582096RP11-159D12.2ENSG00000138376BARD150.5491.5499Q99728RBP,EpiNA
ENSG00000264112ENST00000582096RP11-159D12.2ENSG00000133226SRRM128.194.509Q8IYB3RBPNA
ENSG00000264112ENST00000582096RP11-159D12.2ENSG00000164548TRA2A17.7592.6706Q13595RBPENCODE
ENSG00000264112ENST00000582096RP11-159D12.2ENSG00000167978SRRM217.6896.0706Q9UQ35RBPNA
ENSG00000264112ENST00000582096RP11-159D12.2ENSG00000111605CPSF614.1991.2755Q16630RBPENCODE;High-throughput data
ENSG00000264112ENST00000585065RP11-159D12.2ENSG00000111641NOP297.5292.4326P46087RBPNA
ENSG00000264112ENST00000585065RP11-159D12.2ENSG00000122965RBM1996.4793.2879Q9Y4C8RBPNA
ENSG00000264112ENST00000585065RP11-159D12.2ENSG00000104517UBR594.3495.0776O95071RBP,EpiNA
ENSG00000264112ENST00000585065RP11-159D12.2ENSG00000213079SCAF890.6295.6094Q9UPN6RBPNA
ENSG00000264112ENST00000585065RP11-159D12.2ENSG00000198231DDX4290.294.5575Q86XP3RBPENCODE
ENSG00000264112ENST00000585065RP11-159D12.2ENSG00000121057AKAP189.0193.7124Q92667RBPNA
ENSG00000264112ENST00000585065RP11-159D12.2ENSG00000130254SAFB288.2296.538Q14151TF,RBPENCODE
ENSG00000264112ENST00000585065RP11-159D12.2ENSG00000004534RBM688.0596.6719P78332RBPNA
ENSG00000264112ENST00000585065RP11-159D12.2ENSG00000198000NOL886.5696.8492Q76FK4RBPNA
ENSG00000264112ENST00000585065RP11-159D12.2ENSG00000003756RBM584.191.7929P52756RBPENCODE
ENSG00000264112ENST00000585065RP11-159D12.2ENSG00000137776SLTM83.0496.867Q9NWH9RBPENCODE
ENSG00000264112ENST00000585065RP11-159D12.2ENSG00000163728TTC1481.0294.6301Q96N46RBPNA
ENSG00000264112ENST00000585065RP11-159D12.2ENSG00000012048BRCA178.8196.5395P38398RBP,EpiNA
ENSG00000264112ENST00000585065RP11-159D12.2ENSG00000106344RBM2878.7196.1013Q9NW13RBPNA
ENSG00000264112ENST00000585065RP11-159D12.2ENSG00000125676THOC276.1895.2671Q8NI27RBPNA
ENSG00000264112ENST00000585065RP11-159D12.2ENSG00000162775RBM1573.6794.1745Q96T37RBPENCODE
ENSG00000264112ENST00000585065RP11-159D12.2ENSG00000138376BARD172.5594.4178Q99728RBP,EpiNA
ENSG00000264112ENST00000585065RP11-159D12.2ENSG00000085872CHERP67.0695.3332Q8IWX8RBPNA
ENSG00000264112ENST00000585065RP11-159D12.2ENSG00000135870RC3H158.0295.012Q5TC82RBPNA
ENSG00000264112ENST00000585065RP11-159D12.2ENSG00000161813LARP449.6292.0925Q71RC2RBPENCODE
ENSG00000264112ENST00000585065RP11-159D12.2ENSG00000116560SFPQ47.4293.7284P23246RBP,EpiNA
ENSG00000264112ENST00000585065RP11-159D12.2ENSG00000129351ILF344.3292.5294Q12906RBPENCODE
ENSG00000264112ENST00000585065RP11-159D12.2ENSG00000133226SRRM141.0197.2109Q8IYB3RBPNA
ENSG00000264112ENST00000585065RP11-159D12.2ENSG00000100650SRSF538.593.58Q13243RBPNA
ENSG00000264112ENST00000585065RP11-159D12.2ENSG00000239306RBM1437.0892.1186Q96PK6RBPNA
ENSG00000264112ENST00000585065RP11-159D12.2ENSG00000184863RBM3336.6895.5895Q96EV2RBPNA
ENSG00000264112ENST00000585065RP11-159D12.2ENSG00000083544TDRD336.3395.4505Q9H7E2RBP,EpiNA
ENSG00000264112ENST00000585065RP11-159D12.2ENSG00000167978SRRM234.0997.8185Q9UQ35RBPNA
ENSG00000264112ENST00000585065RP11-159D12.2ENSG00000116350SRSF433.6595.3107Q08170RBPNA
ENSG00000264112ENST00000585065RP11-159D12.2ENSG00000102081FMR131.2194.0526Q06787RBPNA
ENSG00000264112ENST00000585065RP11-159D12.2ENSG00000173933RBM430.1790.0453Q9BWF3RBPNA
ENSG00000264112ENST00000585065RP11-159D12.2ENSG00000145907G3BP129.4493.4615Q13283RBPNA
ENSG00000264112ENST00000585065RP11-159D12.2ENSG00000162613FUBP128.5491.9751Q96AE4RBPNA
ENSG00000264112ENST00000585065RP11-159D12.2ENSG00000147274RBMX25.0994.4804P38159RBPNA
ENSG00000264112ENST00000585065RP11-159D12.2ENSG00000164548TRA2A24.7994.0711Q13595RBPENCODE
ENSG00000264112ENST00000585065RP11-159D12.2ENSG00000108349CASC324.5795.2421O15234RBPNA
ENSG00000264112ENST00000585065RP11-159D12.2ENSG00000127993RBM4823.2991.1348Q5RL73RBPNA
ENSG00000264112ENST00000585065RP11-159D12.2ENSG00000144161ZC3H822.092.5032Q8N5P1TF,RBPNA
ENSG00000264112ENST00000585065RP11-159D12.2ENSG00000124193SRSF621.4394.2012Q13247RBPNA
ENSG00000264112ENST00000585065RP11-159D12.2ENSG00000173914RBM4B20.4490.2103Q9BQ04RBPNA
ENSG00000264112ENST00000585065RP11-159D12.2ENSG00000089280FUS18.4394.193P35637RBPHigh-throughput data
ENSG00000264112ENST00000585065RP11-159D12.2ENSG00000111364DDX5517.2591.5499Q8NHQ9RBPNA
ENSG00000264112ENST00000585065RP11-159D12.2ENSG00000136450SRSF115.893.1441Q07955RBP,EpiNA
ENSG00000264112ENST00000585065RP11-159D12.2ENSG00000115875SRSF715.892.4296Q16629RBPNA
ENSG00000264112ENST00000585065RP11-159D12.2ENSG00000161547SRSF215.6292.953Q01130RBPNA
ENSG00000264112ENST00000585065RP11-159D12.2ENSG00000149532CPSF715.2190.1456Q8N684RBPHigh-throughput data
ENSG00000264112ENST00000585065RP11-159D12.2ENSG00000111605CPSF613.0893.032Q16630RBPENCODE;High-throughput data
ENSG00000264112ENST00000577267RP11-159D12.2ENSG00000104517UBR5103.293.6678O95071RBP,EpiNA
ENSG00000264112ENST00000577267RP11-159D12.2ENSG00000213079SCAF8101.9195.7158Q9UPN6RBPNA
ENSG00000264112ENST00000577267RP11-159D12.2ENSG00000130254SAFB2101.6396.2597Q14151TF,RBPENCODE
ENSG00000264112ENST00000577267RP11-159D12.2ENSG00000004534RBM698.4894.4198P78332RBPNA
ENSG00000264112ENST00000577267RP11-159D12.2ENSG00000121057AKAP197.9391.7317Q92667RBPNA
ENSG00000264112ENST00000577267RP11-159D12.2ENSG00000198000NOL897.3996.1008Q76FK4RBPNA
ENSG00000264112ENST00000577267RP11-159D12.2ENSG00000137776SLTM93.4696.8783Q9NWH9RBPENCODE
ENSG00000264112ENST00000577267RP11-159D12.2ENSG00000163728TTC1492.0693.2543Q96N46RBPNA
ENSG00000264112ENST00000577267RP11-159D12.2ENSG00000012048BRCA187.3695.2301P38398RBP,EpiNA
ENSG00000264112ENST00000577267RP11-159D12.2ENSG00000106344RBM2886.895.2989Q9NW13RBPNA
ENSG00000264112ENST00000577267RP11-159D12.2ENSG00000162775RBM1581.0891.2621Q96T37RBPENCODE
ENSG00000264112ENST00000577267RP11-159D12.2ENSG00000085872CHERP73.0294.4973Q8IWX8RBPNA
ENSG00000264112ENST00000577267RP11-159D12.2ENSG00000135870RC3H166.3594.0967Q5TC82RBPNA
ENSG00000264112ENST00000577267RP11-159D12.2ENSG00000129351ILF348.5392.5234Q12906RBPENCODE
ENSG00000264112ENST00000577267RP11-159D12.2ENSG00000161813LARP442.8392.6547Q71RC2RBPENCODE
ENSG00000264112ENST00000577267RP11-159D12.2ENSG00000167978SRRM236.9297.3493Q9UQ35RBPNA
ENSG00000264112ENST00000577267RP11-159D12.2ENSG00000133226SRRM136.3497.1619Q8IYB3RBPNA
ENSG00000264112ENST00000577267RP11-159D12.2ENSG00000184863RBM3336.3491.4708Q96EV2RBPNA
ENSG00000264112ENST00000577267RP11-159D12.2ENSG00000102081FMR133.9690.9941Q06787RBPNA
ENSG00000264112ENST00000577267RP11-159D12.2ENSG00000083544TDRD332.2694.9839Q9H7E2RBP,EpiNA
ENSG00000264112ENST00000577267RP11-159D12.2ENSG00000145907G3BP129.4292.726Q13283RBPNA
ENSG00000264112ENST00000577267RP11-159D12.2ENSG00000100650SRSF527.8292.7752Q13243RBPNA
ENSG00000264112ENST00000577267RP11-159D12.2ENSG00000116350SRSF426.295.5345Q08170RBPNA
ENSG00000264112ENST00000577267RP11-159D12.2ENSG00000089280FUS21.6291.4305P35637RBPHigh-throughput data
ENSG00000264112ENST00000577267RP11-159D12.2ENSG00000144161ZC3H820.5790.7835Q8N5P1TF,RBPNA
ENSG00000264112ENST00000577267RP11-159D12.2ENSG00000124193SRSF620.2594.9388Q13247RBPNA
ENSG00000264112ENST00000577267RP11-159D12.2ENSG00000099622CIRBP19.2890.9254Q14011RBPNA
ENSG00000264112ENST00000577267RP11-159D12.2ENSG00000111605CPSF618.492.0736Q16630RBPENCODE;High-throughput data
ENSG00000264112ENST00000577267RP11-159D12.2ENSG00000108349CASC317.1592.7489O15234RBPNA
ENSG00000264112ENST00000577267RP11-159D12.2ENSG00000147274RBMX13.1294.4988P38159RBPNA
ENSG00000264112ENST00000577267RP11-159D12.2ENSG00000161547SRSF211.9793.1989Q01130RBPNA
ENSG00000264112ENST00000577267RP11-159D12.2ENSG00000115875SRSF710.8291.5185Q16629RBPNA

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lncRNA-DNA interaction for RP11-159D12.2

lncrna_DNA
check buttonlncRNA targets the enhancer region and positively regulates the gene expression.
Only predicted by TDF
ZNF30,RBM19,NCOA2,XRN1,ILF3,GLI4,PBX2,RBM39,CIRBP,LCORL,DDX56,MZF1,MYSM1,NRF1,AKAP8,KAT7,ARID2,ZXDC,SUGP2,DMTF1,VEZF1,RBM27,ZNF70,RBM28,TBP,IKZF5,DDX55,KMT2B,STAT2,TET3,ZBTB5,NR6A1,ZFP14,RNPC3,ZFP69,BARD1,SAFB2,THOC1,MNT,TRNT1,PNPT1,CNOT4,CHTOP,ZBED5,ZZZ3,CENPT,TTC14,RBM4,CREB1,RC3H1,ZNF44,EEA1,ZNF91,SRSF4,RBMX,AGO2,RBM4B,U2AF2,CSTF3,RBM26,CPSF1,RBM14,ADNP,MYEF2,MBD1,IKZF4,PUS7L,ASH1L,CLOCK,DHX34,CASC3,FUBP1,RBM15,ZFP30,SP4,CPSF7,TCF20,UBR5,THAP9,THOC2,DDX6,TSN,ZBTB6,ZNF34,THAP6,PATZ1,MOV10,E2F5,DDX17,SRRM2,RFX7,AQR,FMR1,LCOR,MECP2,PHF1,FOXJ3,PURA,ZNF41,ZC3H8,HSF4,RBM41,NOL9,DZIP3,ZFP62,SGSM2,CELF1,KRR1,ELK4,TIGD1,RBM45,NFXL1,PRDM2,DDX51,AGO3,SRSF2,ZGPAT,FIZ1,ZMAT1,ZNF83,ZNF3,RFX3,NXF1,ZFX,ZNF8,NAF1,ZNF18,NKRF,NR2C2,PCGF2,DDX11,PUS10,GPBP1,RBM6,NOP2,RBM48,NOL3,ZFHX3,PUM2,XPO1,RBM5,BRCA1,ELF2,ZNF43,PTBP3,ZFP28,SP3,ZNF17,DOT1L,ZNF84,DDX42,BAZ2B,TRA2A,KMT2A,ZNF69,SRSF7,HINFP,AKAP1,NR2C1,ZFP3,TEP1,ZBED6,SFPQ,ETV3,TET2,RBM33,NOL8,ATF2,ZNF10
Exist in public source
NA

check buttonlncRNA targets the promoter region and positively regulates the gene expression.
Only predicted by TDF
SP4,DOT1L,TBP,DDX17,HSF4,MZF1,NRF1,UBR5,NOL3,AGO2,ZNF18,E4F1,RBM5,RFX7,CNOT6,MECP2,ASH1L,BBX,U2AF2,ZMAT1,THOC2,TIGD1,ZFP2,STAT2,SRSF5,FUBP1,LCOR,ZNF69,DDX46,ZNF3,CPSF7,RBM19,RC3H1,ZNF83,PUS10,RBM6,ZFHX3,ZFP30,TET2,PBX2,ETV3,ZNF70,AGO4,TEP1,ZNF30,ZNF41,CELF1,PCGF2,NR6A1,KMT2A,FOXK2,ARID2,TRA2A,ZBTB6,CIRBP,RBM4,AKAP1,LCORL
Exist in public source
NA

check buttonlncRNA targets the promoter region and negatively regulates the gene expression.

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lncRNA-RNA interaction for RP11-159D12.2

lncrna_RNA
check buttonlncRNA targets the 3'UTR region and negatively regulates the mRNA.
Only predicted by lncTar
RNH1
Exist in public source
NA

check buttonlncRNA targets the skipped exon region.
-lncRNA and exonskipping events are positively correlated.
lncRNA and exonskipping events positive correlated
LncRNA Ensembl IDLncRNA ENST IDExon IDSkipped ExondGndGGene name with skipped exonTransID with skipped exonORF mutation
ENSG00000264112ENST00000585065exon_skip_470077chr7:102397619-102397698-13.37-0.2228PRKRIP1ENST00000397912,ENST00000496391Frame-shift

-lncRNA and exonskipping events are negatively correlated.
lncRNA and exonskipping events negative correlated
LncRNA Ensembl IDLncRNA ENST IDExon IDSkipped ExondGndGGene name with skipped exonTransID with skipped exonLOF
ENSG00000264112ENST00000585065exon_skip_132563chr16:2527560-2527615-14.57-0.2649AMDHD2ENST00000293971Frame-shift
ENSG00000264112ENST00000585065exon_skip_327433chr2:86125794-86125880-8.80-0.2146PTCD3ENST00000254630Frame-shift
ENSG00000264112ENST00000585065exon_skip_370518chr22:50247691-50247776-15.16-0.4738HDAC10ENST00000216271Frame-shift
ENSG00000264112ENST00000585065exon_skip_41813chr10:68337857-68337996-21.56-0.1658HNRNPH3ENST00000265866Frame-shift
ENSG00000264112ENST00000585065exon_skip_95407chr12:95040475-95040597-15.25-0.1452NR2C1ENST00000333003Frame-shift
ENSG00000264112ENST00000585065exon_skip_380242chr3:186784961-186785101-16.49-0.1472EIF4A2ENST00000323963Frame-shift
ENSG00000264112ENST00000585065exon_skip_382458chr3:38131595-38131638-8.90-0.4238ACAA1ENST00000333167Frame-shift
ENSG00000264112ENST00000585065exon_skip_41841chr10:68756272-68756483-23.26-0.1224CCAR1ENST00000265872Frame-shift
ENSG00000264112ENST00000585065exon_skip_52701chr10:97468965-97469104-17.27-0.1451MMS19ENST00000370782,ENST00000438925Frame-shift
ENSG00000264112ENST00000585065exon_skip_53559chr10:101793912-101793998-16.23-0.1955OGAENST00000361464Frame-shift
ENSG00000264112ENST00000585065exon_skip_66482chr11:126274926-126275021-12.07-0.1403FOXRED1ENST00000263578Frame-shift
ENSG00000264112ENST00000585065exon_skip_114365chr14:74290026-74290118-13.67-0.1873ABCD4ENST00000356924Frame-shift
ENSG00000264112ENST00000585065exon_skip_138351chr16:70469151-70469323-19.53-0.1502FUKENST00000288078Frame-shift
ENSG00000264112ENST00000585065exon_skip_290158chr17:42953723-42953778-8.73-0.1617AARSD1ENST00000427569Frame-shift
ENSG00000264112ENST00000585065exon_skip_300663chr19:1425877-1425960-13.61-0.1768DAZAP1ENST00000233078Frame-shift
ENSG00000264112ENST00000585065exon_skip_302168chr19:10680345-10680443-14.20-0.2029ILF3ENST00000590261Frame-shift
ENSG00000264112ENST00000585065exon_skip_326885chr2:74490024-74490127-14.52-0.1482TTC31ENST00000233623Frame-shift
ENSG00000264112ENST00000585065exon_skip_364741chr22:31603743-31603819-15.39-0.2199SFI1ENST00000400288Frame-shift
ENSG00000264112ENST00000585065exon_skip_374497chr3:49999439-49999513-11.01-0.2159RBM6ENST00000266022Frame-shift
ENSG00000264112ENST00000585065exon_skip_387016chr3:121788283-121788432-15.40-0.1092IQCB1ENST00000310864Frame-shift
ENSG00000264112ENST00000577267exon_skip_442657chr5:74730259-74730398-13.00-0.1008GFM2ENST00000296805,ENST00000509430Frame-shift
ENSG00000264112ENST00000585065exon_skip_444499chr5:138164086-138164133-9.02-0.2313BRD8ENST00000254900Frame-shift
ENSG00000264112ENST00000585065exon_skip_470226chr7:103307595-103307708-12.91-0.1317PMPCBENST00000249269Frame-shift
ENSG00000264112ENST00000585065exon_skip_340759chr2:85552415-85552567-21.05-0.1711GGCXENST00000233838Frame-shift
ENSG00000264112ENST00000585065exon_skip_374581chr3:50110378-50110463-12.22-0.1567RBM5ENST00000347869Frame-shift

check buttonlncRNA targets by miRNA.
LncRNA Ensembl IDmiRNA IDLncRNA ENST IDBinding site in lncRNAScoreEnergyAlign LenPublic source

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Variants for RP11-159D12.2

check buttonRNA A-to-I editing events in lncRNA.
LncRNAediting IDLncRNA Ensembl IDChromosomeEditing PositionStrandGene TypeGene NameTranscript IDTranscript TypeTranscript Name

check buttonEdited-associated DElncRNAs in cancer.
LncRNA Ensembl IDLncRNA IndexCancer TypeChr_Postion_StrandAVE1AVE2log2FCW-valueP-valueAdjc.p-valueChange

check buttonCorrelation between RNA A-to-I editing events's frequecy and lncRNA expression.
LncRNA Ensembl IDLncRNA IndexCorrelationP-valueAdjc.p-value

check buttonCis-expression quantitative trait loci(cis-eQTL) of lncRNA.
LncRNA Ensembl IDLncRNA NameSNP infoNumber of Positive corelated CancerPositive corelated CancerNumber of Negative corelated CancerNegative corelated Cancer

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lncRNAs regulate the target genes through functioning as enhancers

lncrna_enhancer
check buttonlncRNA regulates differentially expressed genes by function as enhancer.
LncRNA Ensembl IDPC Gene IDPC Gene NamePositive correlated cancersCancer with PC gene up-regulationCancer with PC gene down-regulation

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lncRNAs regulate the target genes through recruiting transcript factors

lncrna_TF
check buttonLncRNA-TF complex positively regulates the gene expression by target promoter region (#cancer types with positive correlation >= 5).
lncRNA IDTF IDTF NamePCgene IDPCgene NameNumber of CancerCanaer Types
ENSG00000264112ENSG00000162601MYSM1ENSG00000104885DOT1L7CHOL,GBM,KIRC,KIRP,LGG,PRAD,THCA
ENSG00000264112ENSG00000167766ZNF83ENSG00000104885DOT1L7CHOL,GBM,KIRC,KIRP,LGG,PAAD,THCA
ENSG00000264112ENSG00000187605TET3ENSG00000104885DOT1L6CHOL,GBM,KIRC,KIRP,PRAD,THCA
ENSG00000264112ENSG00000272333KMT2BENSG00000104885DOT1L7CHOL,GBM,KIRC,LGG,PAAD,PRAD,THCA
ENSG00000264112ENSG00000065029ZNF76ENSG00000104885DOT1L7CHOL,GBM,KIRC,KIRP,LGG,PAAD,PRAD
ENSG00000264112ENSG00000070476ZXDCENSG00000104885DOT1L8CHOL,GBM,KIRC,LGG,PAAD,PRAD,SARC,THCA
ENSG00000264112ENSG00000099326MZF1ENSG00000104885DOT1L8CHOL,GBM,KIRC,KIRP,LGG,PAAD,PRAD,THCA
ENSG00000264112ENSG00000102901CENPTENSG00000104885DOT1L6CHOL,GBM,KIRC,KIRP,LGG,PAAD
ENSG00000264112ENSG00000105127AKAP8ENSG00000104885DOT1L9CHOL,GBM,KIRC,KIRP,LGG,PAAD,PRAD,SARC,THCA
ENSG00000264112ENSG00000130254SAFB2ENSG00000104885DOT1L7CHOL,GBM,KIRC,KIRP,LGG,PAAD,SARC
ENSG00000264112ENSG00000141644MBD1ENSG00000104885DOT1L7CHOL,GBM,KIRC,KIRP,LGG,PAAD,SARC
ENSG00000264112ENSG00000143033MTF2ENSG00000104885DOT1L5CHOL,KIRP,LGG,PRAD,THCA
ENSG00000264112ENSG00000147789ZNF7ENSG00000104885DOT1L6CHOL,GBM,KIRC,KIRP,LGG,PRAD
ENSG00000264112ENSG00000166432ZMAT1ENSG00000104885DOT1L6GBM,KIRC,KIRP,LGG,PAAD,THCA
ENSG00000264112ENSG00000167967E4F1ENSG00000104885DOT1L6CHOL,GBM,KIRC,KIRP,LGG,PAAD
ENSG00000264112ENSG00000172273HINFPENSG00000104885DOT1L6CHOL,GBM,KIRC,KIRP,LGG,PRAD
ENSG00000264112ENSG00000198040ZNF84ENSG00000104885DOT1L7CHOL,GBM,KIRC,KIRP,PAAD,PRAD,THCA
ENSG00000264112ENSG00000213928IRF9ENSG00000104885DOT1L5GBM,KIRC,KIRP,LGG,THCA
ENSG00000264112ENSG00000250571GLI4ENSG00000104885DOT1L5CHOL,GBM,KIRC,LGG,PAAD
ENSG00000264112ENSG00000162601MYSM1ENSG00000112592TBP5CHOL,DLBC,KIRC,KIRP,THCA
ENSG00000264112ENSG00000143033MTF2ENSG00000112592TBP5CHOL,DLBC,KIRC,KIRP,THCA
ENSG00000264112ENSG00000104885DOT1LENSG00000100201DDX176CHOL,GBM,KIRC,KIRP,LGG,PRAD
ENSG00000264112ENSG00000117000RLFENSG00000100201DDX176COAD,DLBC,KIRP,LUAD,PRAD,SKCM
ENSG00000264112ENSG00000118058KMT2AENSG00000100201DDX178BLCA,COAD,DLBC,GBM,KIRC,LUAD,PRAD,TGCT
ENSG00000264112ENSG00000123636BAZ2BENSG00000100201DDX1713BLCA,BRCA,CESC,COAD,ESCA,GBM,KIRC,LGG,LUAD,PRAD,STAD,THYM,UCEC
ENSG00000264112ENSG00000136504KAT7ENSG00000100201DDX179BLCA,CESC,CHOL,COAD,DLBC,LUAD,PRAD,READ,SARC
ENSG00000264112ENSG00000140836ZFHX3ENSG00000100201DDX175BLCA,BRCA,CESC,COAD,GBM
ENSG00000264112ENSG00000147124ZNF41ENSG00000100201DDX177BLCA,CHOL,COAD,DLBC,ESCA,GBM,LUAD
ENSG00000264112ENSG00000162601MYSM1ENSG00000100201DDX1719BLCA,BRCA,CHOL,COAD,DLBC,ESCA,GBM,KIRC,KIRP,LGG,LUAD,PCPG,PRAD,READ,SKCM,STAD,THCA,THYM,UCEC
ENSG00000264112ENSG00000167232ZNF91ENSG00000100201DDX178BLCA,BRCA,COAD,GBM,KIRP,LUAD,PRAD,SKCM
ENSG00000264112ENSG00000167766ZNF83ENSG00000100201DDX1715BLCA,BRCA,CHOL,COAD,DLBC,GBM,KIRC,KIRP,LGG,LUAD,PRAD,SARC,TGCT,THCA,UCEC
ENSG00000264112ENSG00000168769TET2ENSG00000100201DDX179BLCA,BRCA,COAD,GBM,KIRC,LUAD,PRAD,SARC,THYM
ENSG00000264112ENSG00000168795ZBTB5ENSG00000100201DDX175COAD,LGG,LUAD,PRAD,READ
ENSG00000264112ENSG00000171634BPTFENSG00000100201DDX1713BLCA,BRCA,CHOL,COAD,DLBC,GBM,LUAD,LUSC,PRAD,READ,STAD,THYM,UCEC
ENSG00000264112ENSG00000181827RFX7ENSG00000100201DDX176BRCA,COAD,DLBC,LUAD,PRAD,STAD
ENSG00000264112ENSG00000186272ZNF17ENSG00000100201DDX177COAD,GBM,KIRC,LUAD,PRAD,TGCT,UCEC
ENSG00000264112ENSG00000187605TET3ENSG00000100201DDX1710CHOL,COAD,DLBC,GBM,KIRC,KIRP,LUAD,PRAD,READ,THCA
ENSG00000264112ENSG00000196670ZFP62ENSG00000100201DDX1714BLCA,CESC,CHOL,COAD,DLBC,GBM,KIRC,KIRP,LUAD,PRAD,READ,STAD,TGCT,THYM
ENSG00000264112ENSG00000272333KMT2BENSG00000100201DDX178DLBC,GBM,KIRC,LGG,PCPG,PRAD,TGCT,THCA
ENSG00000264112ENSG00000036549ZZZ3ENSG00000100201DDX178CHOL,COAD,DLBC,LUAD,PRAD,SKCM,STAD,UCEC
ENSG00000264112ENSG00000062194GPBP1ENSG00000100201DDX175CHOL,COAD,DLBC,LUAD,STAD
ENSG00000264112ENSG00000065029ZNF76ENSG00000100201DDX177CESC,CHOL,DLBC,KIRC,KIRP,LGG,SARC
ENSG00000264112ENSG00000070476ZXDCENSG00000100201DDX1712BLCA,CHOL,COAD,DLBC,GBM,KIRC,LGG,LUAD,LUSC,PRAD,SARC,THCA
ENSG00000264112ENSG00000080298RFX3ENSG00000100201DDX176CESC,COAD,KIRC,LUAD,PCPG,UCEC
ENSG00000264112ENSG00000099326MZF1ENSG00000100201DDX1716BLCA,BRCA,CESC,CHOL,DLBC,GBM,KIRC,KIRP,LGG,LUAD,LUSC,PRAD,SKCM,STAD,THCA,THYM
ENSG00000264112ENSG00000101126ADNPENSG00000100201DDX176CHOL,COAD,DLBC,GBM,LUAD,PRAD
ENSG00000264112ENSG00000102901CENPTENSG00000100201DDX176CHOL,GBM,KIRC,KIRP,LGG,LUSC
ENSG00000264112ENSG00000102908NFAT5ENSG00000100201DDX179BLCA,BRCA,COAD,DLBC,ESCA,GBM,LUAD,PRAD,UCEC
ENSG00000264112ENSG00000105127AKAP8ENSG00000100201DDX1712CHOL,GBM,KIRC,KIRP,LGG,LUSC,PRAD,READ,SARC,SKCM,TGCT,THCA
ENSG00000264112ENSG00000115966ATF2ENSG00000100201DDX176CHOL,COAD,SARC,STAD,TGCT,UCEC
ENSG00000264112ENSG00000123411IKZF4ENSG00000100201DDX176CESC,COAD,DLBC,KIRC,PRAD,THYM
ENSG00000264112ENSG00000124782RREB1ENSG00000100201DDX176BRCA,COAD,DLBC,KIRC,LUAD,THYM
ENSG00000264112ENSG00000126804ZBTB1ENSG00000100201DDX1714BLCA,COAD,DLBC,ESCA,GBM,KIRC,KIRP,LGG,LUAD,SARC,SKCM,STAD,THYM,UCEC
ENSG00000264112ENSG00000130254SAFB2ENSG00000100201DDX178CHOL,KIRC,KIRP,LGG,LUSC,PCPG,READ,SARC
ENSG00000264112ENSG00000141644MBD1ENSG00000100201DDX176CHOL,DLBC,KIRC,KIRP,LGG,SARC
ENSG00000264112ENSG00000142065ZFP14ENSG00000100201DDX178BLCA,CESC,CHOL,KIRC,LGG,LUAD,PRAD,TGCT
ENSG00000264112ENSG00000143033MTF2ENSG00000100201DDX1711BLCA,CHOL,COAD,DLBC,KIRC,KIRP,LUAD,PRAD,SKCM,THCA,UCEC
ENSG00000264112ENSG00000144161ZC3H8ENSG00000100201DDX1715BRCA,CHOL,COAD,DLBC,GBM,KIRC,KIRP,LGG,LUAD,PRAD,READ,SARC,SKCM,TGCT,THYM
ENSG00000264112ENSG00000146587RBAKENSG00000100201DDX179CHOL,COAD,GBM,KIRC,KIRP,LUAD,PCPG,STAD,THYM
ENSG00000264112ENSG00000146757ZNF92ENSG00000100201DDX175CESC,CHOL,COAD,DLBC,SKCM
ENSG00000264112ENSG00000147789ZNF7ENSG00000100201DDX1711CHOL,GBM,KIRC,KIRP,LGG,LUAD,PCPG,PRAD,READ,SKCM,TGCT
ENSG00000264112ENSG00000164631ZNF12ENSG00000100201DDX175CHOL,COAD,KIRP,LUAD,THYM
ENSG00000264112ENSG00000166432ZMAT1ENSG00000100201DDX1714BRCA,CESC,CHOL,KIRC,KIRP,LGG,LUAD,PCPG,PRAD,SARC,TGCT,THCA,THYM,UCEC
ENSG00000264112ENSG00000168661ZNF30ENSG00000100201DDX175GBM,KIRC,KIRP,READ,TGCT
ENSG00000264112ENSG00000170448NFXL1ENSG00000100201DDX178CHOL,COAD,DLBC,LUAD,READ,SKCM,STAD,THYM
ENSG00000264112ENSG00000172273HINFPENSG00000100201DDX175CHOL,KIRC,KIRP,LGG,PRAD
ENSG00000264112ENSG00000178177LCORLENSG00000100201DDX175CESC,CHOL,COAD,LUAD,SKCM
ENSG00000264112ENSG00000180787ZFP3ENSG00000100201DDX175CESC,COAD,DLBC,LUAD,PRAD
ENSG00000264112ENSG00000187792ZNF70ENSG00000100201DDX177GBM,KIRC,KIRP,LGG,LUAD,PCPG,PRAD
ENSG00000264112ENSG00000187815ZFP69ENSG00000100201DDX176COAD,DLBC,KIRC,KIRP,LUAD,TGCT
ENSG00000264112ENSG00000189079ARID2ENSG00000100201DDX178BLCA,BRCA,CHOL,COAD,DLBC,GBM,LUAD,PRAD
ENSG00000264112ENSG00000196233LCORENSG00000100201DDX1710BLCA,BRCA,COAD,DLBC,LUAD,PRAD,SKCM,TGCT,THYM,UCEC
ENSG00000264112ENSG00000196867ZFP28ENSG00000100201DDX177KIRP,LUAD,PRAD,SARC,TGCT,THCA,UCEC
ENSG00000264112ENSG00000197857ZNF44ENSG00000100201DDX1710BRCA,COAD,ESCA,GBM,LGG,LUAD,PCPG,PRAD,READ,STAD
ENSG00000264112ENSG00000198040ZNF84ENSG00000100201DDX1717BLCA,BRCA,CESC,CHOL,COAD,ESCA,GBM,KIRC,KIRP,LUAD,PCPG,PRAD,READ,SKCM,TGCT,THCA,THYM
ENSG00000264112ENSG00000198429ZNF69ENSG00000100201DDX176BLCA,GBM,KIRC,KIRP,LUAD,THCA
ENSG00000264112ENSG00000198521ZNF43ENSG00000100201DDX175BLCA,GBM,KIRC,KIRP,LUAD
ENSG00000264112ENSG00000198815FOXJ3ENSG00000100201DDX175CHOL,COAD,DLBC,GBM,LUAD
ENSG00000264112ENSG00000204304PBX2ENSG00000100201DDX176CHOL,DLBC,GBM,KIRC,LGG,PRAD
ENSG00000264112ENSG00000213928IRF9ENSG00000100201DDX1710DLBC,GBM,KIRC,KIRP,LUAD,PRAD,READ,STAD,THCA,THYM
ENSG00000264112ENSG00000256223ZNF10ENSG00000100201DDX1713CESC,ESCA,GBM,KIRC,KIRP,LUAD,PRAD,SARC,SKCM,TGCT,THCA,THYM,UCEC
ENSG00000264112ENSG00000278129ZNF8ENSG00000100201DDX179BLCA,BRCA,COAD,GBM,KIRP,LGG,LUAD,TGCT,UCEC
ENSG00000264112ENSG00000167766ZNF83ENSG00000102878HSF49ACC,GBM,KIRC,KIRP,LGG,PAAD,PCPG,PRAD,THCA
ENSG00000264112ENSG00000099326MZF1ENSG00000102878HSF412ACC,CESC,CHOL,DLBC,GBM,KIRC,KIRP,LUSC,PAAD,PCPG,PRAD,THCA
ENSG00000264112ENSG00000102901CENPTENSG00000102878HSF410CHOL,GBM,KIRC,KIRP,LGG,LUSC,PAAD,PCPG,PRAD,READ
ENSG00000264112ENSG00000130254SAFB2ENSG00000102878HSF47CHOL,KIRC,KIRP,LGG,LUSC,PAAD,PCPG
ENSG00000264112ENSG00000144161ZC3H8ENSG00000102878HSF45CHOL,KIRC,LGG,LUSC,STAD
ENSG00000264112ENSG00000147789ZNF7ENSG00000102878HSF46CHOL,GBM,KIRC,KIRP,LGG,READ
ENSG00000264112ENSG00000166432ZMAT1ENSG00000102878HSF47GBM,KIRC,KIRP,LGG,PCPG,PRAD,THCA
ENSG00000264112ENSG00000167967E4F1ENSG00000102878HSF48CHOL,GBM,KIRC,KIRP,LGG,LUSC,PAAD,PCPG
ENSG00000264112ENSG00000172273HINFPENSG00000102878HSF46CHOL,KIRC,KIRP,LGG,PAAD,PRAD
ENSG00000264112ENSG00000197114ZGPATENSG00000102878HSF45GBM,KIRC,LGG,LUSC,PAAD
ENSG00000264112ENSG00000198040ZNF84ENSG00000102878HSF45CHOL,KIRC,KIRP,PAAD,PCPG
ENSG00000264112ENSG00000213928IRF9ENSG00000102878HSF46GBM,KIRC,KIRP,PRAD,READ,STAD
ENSG00000264112ENSG00000250571GLI4ENSG00000102878HSF48CHOL,GBM,KIRC,KIRP,LGG,LUSC,PAAD,PCPG
ENSG00000264112ENSG00000104885DOT1LENSG00000099326MZF17CHOL,GBM,KIRC,KIRP,LGG,PAAD,PRAD
ENSG00000264112ENSG00000167766ZNF83ENSG00000099326MZF116ACC,BLCA,BRCA,CESC,CHOL,DLBC,GBM,KIRC,KIRP,LGG,LUAD,OV,PAAD,PCPG,PRAD,THCA
ENSG00000264112ENSG00000196670ZFP62ENSG00000099326MZF19BLCA,CESC,CHOL,DLBC,GBM,KIRC,KIRP,LUAD,PRAD
ENSG00000264112ENSG00000272333KMT2BENSG00000099326MZF18DLBC,GBM,KIRC,LGG,PAAD,PCPG,PRAD,THCA
ENSG00000264112ENSG00000065029ZNF76ENSG00000099326MZF110CESC,CHOL,DLBC,GBM,KIRC,KIRP,LGG,PAAD,PCPG,PRAD
ENSG00000264112ENSG00000070476ZXDCENSG00000099326MZF111BLCA,CHOL,DLBC,GBM,KIRC,LGG,LUAD,LUSC,PAAD,PRAD,THCA
ENSG00000264112ENSG00000102901CENPTENSG00000099326MZF110CHOL,GBM,KIRC,KIRP,LGG,LUSC,PAAD,PCPG,PRAD,SKCM
ENSG00000264112ENSG00000105127AKAP8ENSG00000099326MZF19CHOL,GBM,KIRC,KIRP,LGG,PAAD,PRAD,SKCM,THCA
ENSG00000264112ENSG00000130254SAFB2ENSG00000099326MZF110CESC,CHOL,GBM,KIRC,KIRP,LGG,LUSC,OV,PAAD,PCPG
ENSG00000264112ENSG00000141644MBD1ENSG00000099326MZF16CHOL,DLBC,GBM,KIRC,KIRP,PAAD
ENSG00000264112ENSG00000142065ZFP14ENSG00000099326MZF15BLCA,CESC,CHOL,LUAD,PAAD
ENSG00000264112ENSG00000144161ZC3H8ENSG00000099326MZF18CHOL,DLBC,KIRC,KIRP,OV,PRAD,SKCM,STAD
ENSG00000264112ENSG00000147789ZNF7ENSG00000099326MZF17CHOL,GBM,KIRC,KIRP,PCPG,PRAD,SKCM
ENSG00000264112ENSG00000154957ZNF18ENSG00000099326MZF17BLCA,GBM,KIRC,KIRP,PAAD,PCPG,THCA
ENSG00000264112ENSG00000166432ZMAT1ENSG00000099326MZF111BRCA,CHOL,GBM,KIRC,KIRP,LGG,LUAD,PAAD,PCPG,PRAD,THCA
ENSG00000264112ENSG00000167967E4F1ENSG00000099326MZF18CHOL,GBM,KIRC,KIRP,LGG,LUSC,PAAD,PCPG
ENSG00000264112ENSG00000172273HINFPENSG00000099326MZF16CHOL,KIRC,KIRP,PAAD,PCPG,PRAD
ENSG00000264112ENSG00000180787ZFP3ENSG00000099326MZF15CESC,DLBC,GBM,LUAD,PAAD
ENSG00000264112ENSG00000197114ZGPATENSG00000099326MZF17GBM,KIRC,LGG,LUSC,PAAD,PCPG,SKCM
ENSG00000264112ENSG00000197857ZNF44ENSG00000099326MZF17ACC,GBM,LGG,LUAD,PAAD,PCPG,STAD
ENSG00000264112ENSG00000198040ZNF84ENSG00000099326MZF113BLCA,CESC,CHOL,GBM,KIRC,KIRP,LUAD,PAAD,PCPG,PRAD,SKCM,THCA,THYM
ENSG00000264112ENSG00000198429ZNF69ENSG00000099326MZF16BLCA,GBM,KIRC,KIRP,LGG,LUAD
ENSG00000264112ENSG00000204304PBX2ENSG00000099326MZF15CHOL,DLBC,GBM,KIRC,LGG
ENSG00000264112ENSG00000213928IRF9ENSG00000099326MZF110DLBC,GBM,KIRC,KIRP,LGG,LUAD,OV,PRAD,STAD,THCA
ENSG00000264112ENSG00000250571GLI4ENSG00000099326MZF18CHOL,GBM,KIRC,KIRP,LGG,LUSC,PAAD,PCPG
ENSG00000264112ENSG00000256223ZNF10ENSG00000099326MZF19CESC,GBM,KIRC,KIRP,LUAD,PAAD,PRAD,SKCM,THCA
ENSG00000264112ENSG00000278129ZNF8ENSG00000099326MZF17BLCA,BRCA,GBM,KIRP,LGG,LUAD,PAAD
ENSG00000264112ENSG00000104885DOT1LENSG00000106459NRF17CHOL,GBM,KIRC,KIRP,LGG,PAAD,SARC
ENSG00000264112ENSG00000123636BAZ2BENSG00000106459NRF15BLCA,GBM,KIRC,LGG,LUAD
ENSG00000264112ENSG00000136504KAT7ENSG00000106459NRF15BLCA,CHOL,GBM,LUAD,SARC
ENSG00000264112ENSG00000162601MYSM1ENSG00000106459NRF19BLCA,CHOL,GBM,KIRC,KIRP,LGG,LUAD,PCPG,THCA
ENSG00000264112ENSG00000167232ZNF91ENSG00000106459NRF15BLCA,GBM,KIRP,LUAD,PAAD
ENSG00000264112ENSG00000167766ZNF83ENSG00000106459NRF19BLCA,CHOL,GBM,KIRC,KIRP,LGG,LUAD,SARC,THCA
ENSG00000264112ENSG00000186272ZNF17ENSG00000106459NRF15GBM,KIRC,LGG,LUAD,PAAD
ENSG00000264112ENSG00000187605TET3ENSG00000106459NRF15CHOL,GBM,KIRC,KIRP,LUAD
ENSG00000264112ENSG00000272333KMT2BENSG00000106459NRF16GBM,KIRC,LGG,PAAD,PCPG,THCA
ENSG00000264112ENSG00000065029ZNF76ENSG00000106459NRF16CHOL,GBM,KIRC,KIRP,LGG,PAAD
ENSG00000264112ENSG00000070476ZXDCENSG00000106459NRF19BLCA,CHOL,GBM,KIRC,LGG,LUAD,PAAD,SARC,THCA
ENSG00000264112ENSG00000099326MZF1ENSG00000106459NRF18CHOL,GBM,KIRC,KIRP,LGG,LUAD,PAAD,THCA
ENSG00000264112ENSG00000102901CENPTENSG00000106459NRF16CHOL,GBM,KIRC,KIRP,LGG,PAAD
ENSG00000264112ENSG00000105127AKAP8ENSG00000106459NRF18CHOL,GBM,KIRC,KIRP,LGG,PAAD,SARC,THCA
ENSG00000264112ENSG00000126804ZBTB1ENSG00000106459NRF17BLCA,GBM,KIRC,KIRP,LGG,LUAD,SARC
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ENSG00000264112ENSG00000118058KMT2AENSG00000189079ARID26BLCA,COAD,DLBC,GBM,LUAD,PRAD
ENSG00000264112ENSG00000123636BAZ2BENSG00000189079ARID27BLCA,BRCA,COAD,GBM,LUAD,PRAD,UCEC
ENSG00000264112ENSG00000136504KAT7ENSG00000189079ARID27BLCA,CHOL,COAD,DLBC,GBM,LUAD,PRAD
ENSG00000264112ENSG00000147124ZNF41ENSG00000189079ARID26BLCA,CHOL,COAD,DLBC,GBM,LUAD
ENSG00000264112ENSG00000162601MYSM1ENSG00000189079ARID29BLCA,BRCA,CHOL,COAD,DLBC,GBM,LUAD,PRAD,UCEC
ENSG00000264112ENSG00000167232ZNF91ENSG00000189079ARID26BLCA,BRCA,COAD,GBM,LUAD,PRAD
ENSG00000264112ENSG00000167766ZNF83ENSG00000189079ARID27BLCA,BRCA,CHOL,COAD,DLBC,GBM,LUAD
ENSG00000264112ENSG00000168769TET2ENSG00000189079ARID26BLCA,BRCA,COAD,GBM,LUAD,PRAD
ENSG00000264112ENSG00000171634BPTFENSG00000189079ARID29BLCA,BRCA,CHOL,COAD,DLBC,GBM,LUAD,PRAD,UCEC
ENSG00000264112ENSG00000181827RFX7ENSG00000189079ARID25BRCA,COAD,DLBC,LUAD,PRAD
ENSG00000264112ENSG00000186272ZNF17ENSG00000189079ARID25COAD,GBM,LUAD,PRAD,UCEC
ENSG00000264112ENSG00000187605TET3ENSG00000189079ARID26CHOL,COAD,DLBC,GBM,LUAD,PRAD
ENSG00000264112ENSG00000196670ZFP62ENSG00000189079ARID27BLCA,CHOL,COAD,DLBC,GBM,LUAD,PRAD
ENSG00000264112ENSG00000036549ZZZ3ENSG00000189079ARID26CHOL,COAD,DLBC,LUAD,PRAD,UCEC
ENSG00000264112ENSG00000070476ZXDCENSG00000189079ARID25BLCA,CHOL,DLBC,LUAD,PRAD
ENSG00000264112ENSG00000101126ADNPENSG00000189079ARID26CHOL,COAD,DLBC,GBM,LUAD,PRAD
ENSG00000264112ENSG00000102908NFAT5ENSG00000189079ARID28BLCA,BRCA,COAD,DLBC,GBM,LUAD,PRAD,UCEC
ENSG00000264112ENSG00000126804ZBTB1ENSG00000189079ARID26BLCA,COAD,DLBC,GBM,LUAD,UCEC
ENSG00000264112ENSG00000143033MTF2ENSG00000189079ARID27BLCA,CHOL,COAD,DLBC,LUAD,PRAD,UCEC
ENSG00000264112ENSG00000144161ZC3H8ENSG00000189079ARID25CHOL,COAD,DLBC,GBM,LUAD
ENSG00000264112ENSG00000180787ZFP3ENSG00000189079ARID25COAD,DLBC,GBM,LUAD,PRAD
ENSG00000264112ENSG00000196233LCORENSG00000189079ARID27BLCA,BRCA,COAD,DLBC,LUAD,PRAD,UCEC
ENSG00000264112ENSG00000197857ZNF44ENSG00000189079ARID25BRCA,COAD,GBM,LUAD,PRAD
ENSG00000264112ENSG00000198040ZNF84ENSG00000189079ARID27BLCA,BRCA,CHOL,COAD,GBM,LUAD,PRAD
ENSG00000264112ENSG00000198815FOXJ3ENSG00000189079ARID25CHOL,COAD,DLBC,GBM,LUAD
ENSG00000264112ENSG00000278129ZNF8ENSG00000189079ARID26BLCA,BRCA,COAD,GBM,LUAD,UCEC
ENSG00000264112ENSG00000123636BAZ2BENSG00000164548TRA2A5COAD,GBM,LGG,LUAD,PCPG
ENSG00000264112ENSG00000162601MYSM1ENSG00000164548TRA2A10CHOL,COAD,GBM,KIRC,KIRP,LGG,LUAD,SKCM,THCA,THYM
ENSG00000264112ENSG00000167232ZNF91ENSG00000164548TRA2A6COAD,GBM,KIRP,LUAD,PAAD,SKCM
ENSG00000264112ENSG00000167766ZNF83ENSG00000164548TRA2A12CHOL,COAD,GBM,KIRC,KIRP,LGG,LUAD,PAAD,PCPG,TGCT,THCA,UCEC
ENSG00000264112ENSG00000196670ZFP62ENSG00000164548TRA2A7CESC,CHOL,COAD,GBM,KIRC,KIRP,THYM
ENSG00000264112ENSG00000272333KMT2BENSG00000164548TRA2A5GBM,KIRC,LGG,PAAD,THCA
ENSG00000264112ENSG00000065029ZNF76ENSG00000164548TRA2A8CHOL,GBM,KIRC,KIRP,LGG,PAAD,PCPG,TGCT
ENSG00000264112ENSG00000102901CENPTENSG00000164548TRA2A8CHOL,GBM,KIRC,KIRP,LGG,PAAD,PCPG,SKCM
ENSG00000264112ENSG00000105127AKAP8ENSG00000164548TRA2A8CHOL,GBM,KIRC,KIRP,LGG,PAAD,TGCT,THCA
ENSG00000264112ENSG00000126804ZBTB1ENSG00000164548TRA2A9COAD,GBM,KIRC,KIRP,LGG,LUAD,SKCM,THYM,UCEC
ENSG00000264112ENSG00000130254SAFB2ENSG00000164548TRA2A7CHOL,KIRC,KIRP,LGG,PAAD,PCPG,TGCT
ENSG00000264112ENSG00000142065ZFP14ENSG00000164548TRA2A7CESC,CHOL,KIRC,LGG,LUAD,PAAD,TGCT
ENSG00000264112ENSG00000143033MTF2ENSG00000164548TRA2A9CHOL,COAD,KIRC,KIRP,LGG,LUAD,SKCM,THCA,UCEC
ENSG00000264112ENSG00000144161ZC3H8ENSG00000164548TRA2A9CHOL,COAD,GBM,KIRC,KIRP,LGG,LUAD,SKCM,THYM
ENSG00000264112ENSG00000146587RBAKENSG00000164548TRA2A7CHOL,COAD,GBM,KIRC,KIRP,LUAD,THYM
ENSG00000264112ENSG00000147789ZNF7ENSG00000164548TRA2A6CHOL,GBM,KIRC,KIRP,LGG,LUAD
ENSG00000264112ENSG00000154957ZNF18ENSG00000164548TRA2A6GBM,KIRC,KIRP,PAAD,PCPG,THCA
ENSG00000264112ENSG00000164631ZNF12ENSG00000164548TRA2A5CHOL,COAD,KIRP,LUAD,THYM
ENSG00000264112ENSG00000166432ZMAT1ENSG00000164548TRA2A11CHOL,KIRC,KIRP,LGG,LUAD,PAAD,PCPG,TGCT,THCA,THYM,UCEC
ENSG00000264112ENSG00000168661ZNF30ENSG00000164548TRA2A6GBM,KIRC,KIRP,LGG,PAAD,TGCT
ENSG00000264112ENSG00000172273HINFPENSG00000164548TRA2A6CHOL,GBM,KIRC,KIRP,LGG,PAAD
ENSG00000264112ENSG00000187815ZFP69ENSG00000164548TRA2A5COAD,KIRC,KIRP,LUAD,TGCT
ENSG00000264112ENSG00000197857ZNF44ENSG00000164548TRA2A5COAD,GBM,LGG,LUAD,PAAD
ENSG00000264112ENSG00000198040ZNF84ENSG00000164548TRA2A13CESC,CHOL,COAD,GBM,KIRC,KIRP,LUAD,PAAD,PCPG,SKCM,TGCT,THCA,THYM
ENSG00000264112ENSG00000198429ZNF69ENSG00000164548TRA2A6GBM,KIRC,KIRP,LGG,LUAD,THCA
ENSG00000264112ENSG00000213928IRF9ENSG00000164548TRA2A6GBM,KIRC,KIRP,LGG,LUAD,THCA
ENSG00000264112ENSG00000250571GLI4ENSG00000164548TRA2A7CHOL,GBM,KIRC,KIRP,LGG,PAAD,PCPG
ENSG00000264112ENSG00000256223ZNF10ENSG00000164548TRA2A10CESC,GBM,KIRC,KIRP,LUAD,SKCM,TGCT,THCA,THYM,UCEC
ENSG00000264112ENSG00000278129ZNF8ENSG00000164548TRA2A5GBM,KIRP,LGG,LUAD,PAAD
ENSG00000264112ENSG00000162601MYSM1ENSG00000186130ZBTB65CHOL,COAD,LUAD,STAD,UCEC
ENSG00000264112ENSG00000171634BPTFENSG00000186130ZBTB65CHOL,COAD,LUAD,STAD,UCEC
ENSG00000264112ENSG00000036549ZZZ3ENSG00000186130ZBTB65CHOL,COAD,LUAD,STAD,UCEC
ENSG00000264112ENSG00000130254SAFB2ENSG00000099622CIRBP5GBM,KIRP,LGG,LUSC,PAAD
ENSG00000264112ENSG00000162601MYSM1ENSG00000173933RBM45CHOL,COAD,LUAD,PRAD,UCEC
ENSG00000264112ENSG00000171634BPTFENSG00000173933RBM45CHOL,COAD,LUAD,PRAD,UCEC
ENSG00000264112ENSG00000143033MTF2ENSG00000173933RBM45CHOL,COAD,LUAD,PRAD,UCEC
ENSG00000264112ENSG00000136504KAT7ENSG00000121057AKAP16CESC,CHOL,DLBC,GBM,READ,SARC
ENSG00000264112ENSG00000171634BPTFENSG00000121057AKAP17CHOL,DLBC,GBM,LUSC,OV,READ,THYM
ENSG00000264112ENSG00000187605TET3ENSG00000121057AKAP15CHOL,DLBC,GBM,LUSC,READ
ENSG00000264112ENSG00000144161ZC3H8ENSG00000121057AKAP16CHOL,DLBC,GBM,LAML,LUSC,SKCM
ENSG00000264112ENSG00000162601MYSM1ENSG00000178177LCORL5CHOL,COAD,LUAD,SKCM,UCEC
ENSG00000264112ENSG00000036549ZZZ3ENSG00000178177LCORL5CHOL,COAD,LUAD,SKCM,UCEC
ENSG00000264112ENSG00000143033MTF2ENSG00000178177LCORL5CHOL,COAD,LUAD,SKCM,UCEC
ENSG00000264112ENSG00000198040ZNF84ENSG00000178177LCORL5CESC,CHOL,COAD,LUAD,SKCM

check buttonLncRNA-TF complex negatively regulates the gene expression by target promoter region (#cancer types with negative correlation >= 5).
lncRNA IDTF IDTF NamePCgene IDPCgene NameNumber of CancerCanaer Types

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lncRNAs regulate the alternative splicing event through interacting with splicing factor

lncrna_AS
check buttonLncRNA-RBP complex positively regulates the exon skippping events by target skipped eoxon region.
LncRNA Ensembl IDRBP IDRBP Gene NameExon Skipping IDSkipped ExonEX Gene NameEX Affected TransIDORF_annoCancer Type

check buttonLncRNA-RBP complex negatively regulates the exon skippping events by target skipped eoxon region.
LncRNA-RBP complex negative regulation
LncRNA Ensembl IDRBP IDRBP Gene NameExon Skipping IDSkipped ExonEX Gene NameEX Affected TransIDORF_annoCancer Type
ENSG00000264112ENSG00000004534RBM6exon_skip_370518ENSG00000100429:chr22:50247691-50247776HDAC10ENST00000216271Frame-shiftSARC,STAD,SKCM,READ,PAAD,THCA
ENSG00000264112ENSG00000003756RBM5exon_skip_370518ENSG00000100429:chr22:50247691-50247776HDAC10ENST00000216271Frame-shiftSARC,STAD,SKCM,READ,PAAD,THCA
ENSG00000264112ENSG00000004534RBM6exon_skip_382458ENSG00000060971:chr3:38131595-38131638ACAA1ENST00000333167Frame-shiftSTAD,SKCM,READ,OV,PCPG,PAAD,TGCT,THCA
ENSG00000264112ENSG00000003756RBM5exon_skip_382458ENSG00000060971:chr3:38131595-38131638ACAA1ENST00000333167Frame-shiftSTAD,SKCM,OV,PCPG,PAAD,TGCT,THCA
ENSG00000264112ENSG00000130254SAFB2exon_skip_382458ENSG00000060971:chr3:38131595-38131638ACAA1ENST00000333167Frame-shiftREAD,OV,PCPG,PAAD,THCA
ENSG00000264112ENSG00000124193SRSF6exon_skip_382458ENSG00000060971:chr3:38131595-38131638ACAA1ENST00000333167Frame-shiftSTAD,SKCM,READ,PAAD,TGCT,THCA
ENSG00000264112ENSG00000144161ZC3H8exon_skip_382458ENSG00000060971:chr3:38131595-38131638ACAA1ENST00000333167Frame-shiftSTAD,SKCM,READ,OV,TGCT
ENSG00000264112ENSG00000004534RBM6exon_skip_114365ENSG00000119688:chr14:74290026-74290118ABCD4ENST00000356924Frame-shiftSKCM,READ,PCPG,PAAD,THCA
ENSG00000264112ENSG00000003756RBM5exon_skip_114365ENSG00000119688:chr14:74290026-74290118ABCD4ENST00000356924Frame-shiftSKCM,READ,PCPG,PAAD,THCA
ENSG00000264112ENSG00000100650SRSF5exon_skip_114365ENSG00000119688:chr14:74290026-74290118ABCD4ENST00000356924Frame-shiftSKCM,READ,PCPG,PAAD,THCA
ENSG00000264112ENSG00000004534RBM6exon_skip_290158ENSG00000266967:chr17:42953723-42953778AARSD1ENST00000427569Frame-shiftSKCM,READ,PAAD,TGCT,THCA
ENSG00000264112ENSG00000004534RBM6exon_skip_470226ENSG00000105819:chr7:103307595-103307708PMPCBENST00000249269Frame-shiftSKCM,PRAD,PCPG,PAAD,THCA

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lncRNAs regulate mRNA through targeting the 3'-UTR region

lncrna_mRNA
check buttonlncRNA regulates differential expressed mRNA by directly targeting 3' UTR region.
LncRNA Ensembl IDLncRNA ENST IDPC Gene NamePC Gene IDPC ENST IDdGnDGCancer with PC gene up-regulationCancer with PC gene Down-regulation

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lncRNAs regulate mRNA by competing with miRNA

lncrna_miRNA
check buttonlncRNA regulates mRNA by competing the miRNA binding site with mRNA.
LncRNA Ensembl IDlncRNA-miRNA-mRNACancer Types

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lncRNA coding potential

check buttonORFfinder result for the gencode.v22.lncRNA.transcript.fa.
lncRNA Ensembl IDlncRNA ENST IDlength(AA)start at transcriptend at transcript
ENSG00000264112.1ENST00000582096.1132185580
ENSG00000264112.1ENST00000577267.114516722109
ENSG00000264112.1ENST00000585065.17617061936