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lncRNA: ENSG00000263874 |
Summary for LINC00672 |
Gene summary |
Gene information | Ensembl ID | ENSG00000263874 | Gene symbol | LINC00672 |
Gene name | ||
HGNC | ||
Entrez ID | 100505576 | |
Gene type | lincRNA | |
Synonyms | ||
UniProtAcc |
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Structure and expression level for LINC00672 |
AS events and RNA A-to-I editing events of lncRNA in TCGA based on Genvode V22 structure. |
Differentially expressed gene analysis between cancer and normal samples. |
Ensembl ID | Base mean | log2FC(AD/control) | lfcSE | Stat | P-value | Adjc.p-value | DEG direction | Cancer type |
ENSG00000263874 | 3.638265e+02 | -2.083896e+00 | 6.022283e-01 | -3.460309e+00 | 5.395550e-04 | 2.191090e-03 | DOWN | GBM |
ENSG00000263874 | 9.510778e+01 | 2.973362e+00 | 4.267484e-01 | 6.967481e+00 | 3.230000e-12 | 5.350000e-11 | UP | CHOL |
ENSG00000263874 | 9.653620e+02 | 4.629993e+00 | 5.131870e-01 | 9.022038e+00 | 1.850000e-19 | 5.930000e-17 | UP | PCPG |
Correlation between lncRNAs and cancer stages. |
LncRNA Ensembl ID | Correlation | P-value | Cancer Type | Adjc.p-value |
ENSG00000263874 | 5.758646e-01 | 3.488601e-05 | CHOL | 1.474328e-04 |
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lncRNA-Protein interaction for LINC00672 |
lncRNA-epigenetic factor interaction (#cancer types with positive correlation >= 5). |
LncRNA Ensembl ID | LncRNA ENST ID | LncRNA Name | Protein Ensembl ID | Protein Name | CatRAPID Score | Lncpro Score | UniPortID | Gene Subtype | Public source |
lncRNA-transcript factor interaction (#cancer types with positive correlation >= 5). |
LncRNA Ensembl ID | LncRNA ENST ID | LncRNA Name | Protein Ensembl ID | Protein Name | CatRAPID Score | Lncpro Score | UniPortID | Gene Subtype | Public source |
lncRNA-RNA binding protein interaction (#cancer types with positive correlation >= 5). |
LncRNA Ensembl ID | LncRNA ENST ID | LncRNA Name | Protein Ensembl ID | Protein Name | CatRAPID Score | Lncpro Score | UniPortID | Gene Subtype | Public source |
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