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lncRNA: ENSG00000262188 |
Summary for LINC01978 |
Gene summary |
Gene information | Ensembl ID | ENSG00000262188 | Gene symbol | LINC01978 |
Gene name | long intergenic non-protein coding RNA 1978 | |
HGNC | 52806 | |
Entrez ID | 101928738 | |
Gene type | lincRNA | |
Synonyms | RP11-353N14.4|LINC01978|17q25.3 | |
UniProtAcc |
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Structure and expression level for LINC01978 |
Differentially expressed gene analysis between cancer and normal samples. |
Ensembl ID | Base mean | log2FC(AD/control) | lfcSE | Stat | P-value | Adjc.p-value | DEG direction | Cancer type |
ENSG00000262188 | 7.413516e+01 | 3.545440e+00 | 5.466197e-01 | 6.486118e+00 | 8.810000e-11 | 1.160000e-09 | UP | CHOL |
ENSG00000262188 | 9.776328e+01 | 3.627457e+00 | 2.491549e-01 | 1.455904e+01 | 5.120000e-48 | 4.240000e-46 | UP | COAD |
ENSG00000262188 | 1.488049e+02 | 1.170474e+00 | 2.633390e-01 | 4.444744e+00 | 8.800000e-06 | 4.760000e-05 | UP | STAD |
ENSG00000262188 | 1.357311e+02 | 4.105642e+00 | 4.885738e-01 | 8.403320e+00 | 4.340000e-17 | 4.960000e-15 | UP | READ |
Correlation between lncRNAs and cancer stages. |
LncRNA Ensembl ID | Correlation | P-value | Cancer Type | Adjc.p-value |
ENSG00000262188 | 6.069625e-01 | 9.856305e-06 | CHOL | 7.108270e-05 |
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lncRNA-Protein interaction for LINC01978 |
lncRNA-epigenetic factor interaction (#cancer types with positive correlation >= 5). |
LncRNA Ensembl ID | LncRNA ENST ID | LncRNA Name | Protein Ensembl ID | Protein Name | CatRAPID Score | Lncpro Score | UniPortID | Gene Subtype | Public source |
lncRNA-transcript factor interaction (#cancer types with positive correlation >= 5). |
LncRNA Ensembl ID | LncRNA ENST ID | LncRNA Name | Protein Ensembl ID | Protein Name | CatRAPID Score | Lncpro Score | UniPortID | Gene Subtype | Public source |
lncRNA-RNA binding protein interaction (#cancer types with positive correlation >= 5). |
LncRNA Ensembl ID | LncRNA ENST ID | LncRNA Name | Protein Ensembl ID | Protein Name | CatRAPID Score | Lncpro Score | UniPortID | Gene Subtype | Public source |
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