 lncRNA targets the enhancer region and positively regulates the gene expression. |
| Only predicted by TDF | | MAD2L2,VAMP1,NDUFS3,MCRS1,ABHD17A,NAPRT,RNF166,MZF1,SHARPIN,MAPK8IP3,SRP19,CACFD1,TMUB1,HAGHL,TIMM17B,MRPS12,NDUFB9,SNRPA,PPP1R37,DTYMK,FAM200A,CHKA,ADAP1,COMMD7,RECQL4,NDUFB2,SCML1,COX19,VKORC1,ACAD10,OFD1,HSPE1,MRPS11,RPS28,CC2D1B,C19orf48,RBM42,RPL35,MIIP,C18orf21,C12orf73,DONSON,FUZ,CDK11A,SYMPK,MRPS2,NAGPA,DCUN1D2,PLIN5,MRPL41,HROB,GIGYF1,CCDC167,NDUFB1,NOL3,SEC31B,RABL6,MPG,PDRG1,ARHGAP33,STAP2,ELOF1,HEXD,IDH3B,SLC22A18,MCRIP1,CDCA3,CCNF,MRPL52,PRADC1,TEDC2,PES1,RBBP8NL,NMRAL1,COX6B1,JMJD6,C1orf159,NDUFS8,DDX56,SWI5,MALSU1,FASTKD1,INO80C,C20orf96,HSCB,ARFGAP1,BICDL2,AP1G2,CCDC40,NUBP2,PTGES2,FANCA,NBEAL2,CCDC78,STYXL1,NPDC1,PKD1,POLR3K,PIDD1,AP5Z1,GGCT,LAS1L,P4HTM,PCED1A,MAPK15,RAB17,POLRMT,MPND,ANKRD49,LEMD2,PTTG1,RSRP1,SLC35C2,REXO4,NXT1,CRACR2B,TRPT1,ROGDI,PCSK4,DDX11,SPC24,ZNRF1,HMBS,ZNF862,IDUA,SULT1A1,SCAND1,COX14,PPCDC,MIER2,RALY,AMH,DUT,NDUFS6,PYM1,AP2S1,MYPOP,NFKBIB,ATXN7L2,STARD3,TAF1D,FOXRED1,DMPK,GFER,TFAP4,MIEN1,MED25,TP53I13,ARMC5,PMF1-BGLAP,SNU13,SLC6A8,UQCRC1,CYBC1,COPE,HMOX2,MRPL11,SLC2A8,BAD,TMEM258,GEMIN6,PHF1,ABHD11,HDAC10,RNF208,HSF4,NOXA1,MRPL17,UCK1,MICALL2,HSPBAP1,SAC3D1,HSD3B7,MZT2A,PSMG4,ZGPAT,PBX4,SAAL1,SFXN4,MAGIX,IFI27L1,BRAT1,GPAA1,UQCR10,MYG1,DTX3,GRIPAP1,ZMYND19,RNF215,MTG2,E2F1,TLE5,MAPK11,NAT9,ABHD14A,LUC7L,LRSAM1,AMY2B,C8orf76,NOP53,RBM33,NDUFB10,DDRGK1,PRDX5,MPHOSPH10,C15orf61,TXN2,CLEC16A,SERGEF,RCC1L,NDUFAB1,HRAS,FZR1,TTC1,SAMD10,GFUS,MFSD10,COMMD5,CINP,PMF1,ZC3HC1,CFAP410,ZC3H3,TSC2,TAF1C,RBM14,SURF6,UBL5,CHFR,DGAT1,ARVCF,PRAF2,KLF16,TEDC1,ANO9,STOML1,WASHC1,KLC1,PTMS,GPS2,NOL12,MBD6,STUB1,MOB2,SPATA2L,SPATA33,LZTS2,EMC9,MACROD1,DUSP28,AXIN1,CIAO3,VPS16,TTLL3,RHBDD3,GDPGP1,PMPCA,SPSB2,LRP5L,TFPT,SH3GLB2,ZNRD2,ANKRD13D,SIRT7,B3GNTL1,UXT,SLIRP,PLLP,PET100,SART1,CMC2,BCS1L,HINT2,LMBR1L,B3GAT3,NDUFA11,CDCA5,CENATAC,SMUG1,SAFB2,APTX,SURF2,ZBED5,EIF3G,CDK2AP2,SLC2A11,GATD1,MICOS13,SUGP1,SPG7,NAA80,SIGIRR,UQCR11,USE1,PPIP5K1,TMEM208,PSENEN,GABPB1,NASP,ANKRD39,MPST,GPR137,ACYP1,MRPS34,CTU2,ELMO3,GAR1,TSSC4,DDX49,PFDN6,C3orf62,YJU2,ALKBH2,BAG1,TMEM160,PARL,AGER,ESS2,TOP1MT,PAN2,SLFN13,DUS3L,CENPH,CCAR2,ARFGAP2,MLF2,KLHL17,HDDC2,DNASE1,SDHAF2,TUFM,HDAC8,PMVK,CCDC24,ORC6,UQCRHL,COX7A2,PCYT2,IQCC,FAAP100,MMAB,FLVCR1,MED16,CAPN12,EMG1,SH2B1,RANBP3,SNRNP25,OVOL2,NDUFB11,C19orf53,THOC1,LCMT1,TNK2,FIS1,TMEM138,ASPHD1,ALKBH6,LTO1,METTL1,CCDC106,ALS2CL,MED27,EXD3,NFKBID,GSDMD,SLX4,ELP5,CHMP2A,DYNLT2,ZNF48,PRMT7,INPP5E,POLR2L,QARS1,EIF3B,VPS4A,ODF3B,HEMK1,UPF3B,FRS3,FBXL8,PSMG2,KRTCAP2,POP5,CDIPT,ZDHHC24,MYL5,UBXN6,UCKL1,CKMT1B,NAP1L4,PTCD1,EP400P1,USF2,COPRS,TRIOBP,SRA1,ENKD1,ASCC2,CPTP,LRRC14,BLOC1S1,PLCG1,MRPL34,BICRA,ARF5,CHTF18,NDUFV1,TFEB,NAT14,CCDC174,CDK5RAP1,MARCHF9,TBRG1,NPRL2,RDH13,SMIM22,WDR24,FBXO46,HDAC11,RGS11,SLC66A1,BCAT2,SGSM3,WDR45,STX10,SEPTIN1,UBALD1,ZBTB3,ENDOV,BLCAP,FAM207A,EFNA3,PRR36,CHADL,YJEFN3,SEC61G,SGSM2,TAF10,KRI1,DBNL,COX4I1,BCL2L12,NFKBIL1,ECSIT,PKMYT1,DYRK4,HOOK2,PELP1,C19orf25,TNIP2,IPO4,TRMT61A,COQ9,SSBP1,ATP5F1D,BRD9,RANGAP1,FKBP2,MOK,SRRT,BOLA3,TAF6L,UBA52,TRIM66,SLC29A2,MRPS26,UBE2I,TMEM161A,RRNAD1,GAK,KIAA0895L,NDUFAF6,ATAD3B,BANF1,PHYKPL,AKT1S1,RECQL5,BIRC5,PHKG2,NARF,TIMM10,BUD31,ASB6,POLR2J,TBC1D17,CENPT,G6PC3,MRTO4,LSM4,SNRPB,C21orf58,C12orf43,ATP5MJ,AAAS,ATP6V1F,CAPN15,CNKSR1,C8orf82,PSMA4,PARD6A,TMEM129,HAUS5,FBXL12,CDAN1,TRAIP,POLL,PDAP1,CHCHD10,E2F4,NDUFC1,FAHD1,OAZ1,CPT1B,GOLGA8B,LONP1,SMG9,TIMM29,GOLGA8A,PAM16,TCIRG1,SAPCD2,ASNS,SMIM4,CACNB3,C19orf18,LZTR1,MRPL54,GSDMB,PHETA1,TCEA2,THAP4,TBC1D24,KRT10,ANTKMT,PSMB7,ATP5MG,WDR83OS,CTU1,ACD,XAB2,CENPB,CLUH,NPEPL1,TMEM203,TUBGCP6,FAAP20,EIF2B5,NDUFA3,KNTC1,GKAP1,TAZ,PSMD13,OGT,RCCD1,RAB4B,RNF187,TARBP2,DHX34,CHKB,TRIM11,OSGEP,CLK1,MRRF,TMEM79,LLGL2,RPS6KB2,DHPS,BABAM1,CARS2,CCDC9B,PIH1D1,MFSD3,NDUFA2,BORCS6,ORMDL1,COQ7,FDX2,MCAT,DDX51,PASK,ZNF593,ATG4B,CENPM,PLCB3,DBN1,FAM229A,CCS,COX6C,CCDC159,NOP2,ABCA7,ACOT8,EEFSEC,ANAPC11,SCNN1D,TOR2A,RRP7A,CCDC12,ILVBL,SHROOM1,DNAJC4,CCDC28B,SMYD5,PPP1R12C,PRR3,BOP1,PIF1,SASS6,TIMM44,CAPN10,METRN,MICA,TMEM175,IZUMO4,IMP4,MRM1,C4orf48,SMPD2,UBL7,PSMC3,FAM71E1,MEPCE,TBL3,CWC15,NFYC,CPSF4,NAA10,FBXO44,TBC1D10B,TUSC2,PGP,LMF1,MRPS15,PRR7,ENOSF1,THOC6,UBOX5,MOGS,GALT,ZFYVE19,IFI27L2,SGF29,MBD3,SERF2,CLEC2D,VPS28,BCL7B,ATP13A1,KIFC2,PSPN,TSNARE1,RABEP2,ALKBH4,NDUFAF5,KHDC1,NDUFA6,HSPBP1,EME2,NDUFAF2,ISOC2,NOP10,DCAF15,R3HDM4,NCAPH2,CCDC134,ATPAF2,GEN1,ACAP3,LRRC27,NOSIP,ZNF10,IDH3G,NUDT1,TRMU,TACC3,PSMA2,SEM1,ZNF598,TIGD5,C1orf35,BUD23,ZCWPW1,KLHDC4,CCNL2,ANKRD10,TENT4A,LSM5,RFNG,DDTL,H2AJ,COPS9,OSBPL7,ZMAT5,FIBP,KAT2A,PLA2G6,TMEM86B,RNPS1,FLAD1,BSG,ITPA,MAP2K2,AURKB,PAQR6,ALKBH7,MRPL22,JMJD8,HAUS7,DEAF1,ANKS3,DDA1,SMDT1,TXNRD2,KRT18,CRYGS,HCN3,FAM234A,ERCC1,CPNE1,PROCA1,URGCP,BTBD2,MAP2K7,PPAN,DPH7,UBE2M,PNPLA7,HINFP,PCBD2,CD320,APBB3,WDR74,RHBDL1,TONSL,ME3,AGAP6,NUDT16L1,NDUFA13,SNRPD2,CSAD,NDUFA4,BCL7C,TMEM259,ARPC5L,CACTIN,EME1,RABGGTA,NUP42,IFT27,ZNHIT1,SARS2,ARHGAP4,SWSAP1,CLN3,PA2G4,MTG1,GTPBP3,NUDT14,C20orf27,MRNIP,SS18L1,MED15,CEP43,UBXN1,MANF,PGGHG,PEX16,FBXL6,RBM10,TRIM52,COA8,PCBP4,VEGFB,MOSPD3,MICAL1,NDUFA8,SPATA20,CNFN,NEDD8,GMEB2,TSR3,YPEL3,SAP30BP,RNASEH2C,DOT1L,SLC25A45,PIN1,ATP5MC2,REX1BD,DENND4B,FASTK,DXO,FAM174C,EPOR,ARFIP2,DPM2,RAB11B,QPCTL,DCLRE1C,MRPL46,ULK3,KCTD13,CCNQ,C6orf136,MAEA,TPRN,TANGO2,SPRN,GINS2,BNIP1,UQCC2,AGPAT2,METTL17,TMEM39B,BBC3,CBY1,SLC12A9,WDR83,USF1,TOMM40,SLC25A29,B3GALT6,ATP5MK,NPIPA5,CYSRT1,NOC4L,TMEM101,CLPP,PIGZ,SPOUT1,MTLN,FBXW4,TSEN54,LMNTD2,BORCS8,NUPR1,FAM193B,SLC25A39,PNKP,SLC25A28,TMEM184A,MRPS25,RHOT2,EIF3K,POLM,MECR,SDF2L1,POC1A,RNFT2,TRIR,JMJD4,SCNM1,RTRAF,GLI4,B4GALT2,NDUFB8,SSR4,TECR,COX5A,NPRL3,SLC37A4,ATP6V0B,FNDC10,MIX23,PFDN2,FAM111A,ANKMY1,GNPTG,NUTF2,INTS11,MMP15,P2RY11,DUS2,NECAB3,ABHD12,CCDC137,EMD,DOHH,SBK1,ABHD18,EPN1,C11orf98,SYCE1L,BRMS1,ZC3H8,GNL2,KNOP1,PQBP1,LENG1,TMEM186,ATF4,PEX11G,TRADD,SF3A2,ZSWIM1,FIZ1,TATDN2,LTB4R,NUDT22,CD2BP2,OGFR,PTOV1,PUSL1,TMEM134,SREK1IP1,ORAI3,UBAC1,TNFRSF14,PSME3IP1,PPP1R14B,DDX41,CROCC,RP9,JOSD2,MVD,RFC2,FAM3A,PSME2,TBRG4,IFFO1,ATP5F1E,CTBP1,CDPF1,MRPL47,UBTF,DPY19L2,UBE2J2,KATNBL1,TIMM13,MTIF3,C7orf26,NDUFA7,SLX4IP,COQ3,EFNA4,CLK3,CCDC74B,UQCRB,ABCB8,MC1R,COQ4,INTS1,SCRIB,ECI1,TMEM223,COMTD1,ENTR1,SLC25A10,SETD6,CHMP1A,NDOR1,GEMIN7,TMEM41B,NDUFA10,PIGQ,ANKRD54,RASSF7,POMT2,TMEM60,YAE1,MESP1,NR2C2AP,PEX14,ARFRP1,ZNF3,CIAO2B,LETM1,ABCD4,AAMDC,MRPL27,MEN1,DGKQ,C19orf47,ARPC4,POLE,VPS33B,KPTN,CSKMT,SUV39H1,RAB26,TPGS1,DSN1,MICOS10,MROH1,CBX8,TRA2A,RNF126,SMARCD3,CEP131,DUS1L,RUVBL2,CNTROB,NADSYN1,IMMP1L,RPS17,RBM19,TPRA1,MAPKBP1,SLC26A6,IRF3,IMP3,C7orf50,C1orf122,GADD45GIP1,PIGL,AGAP3,DDX39A,STAG3L5P-PVRIG2P-PILRB,LIN37,PPP1R16A,SS18L2,MAPK12,RFXANK,FAM89B,BCAR1,ZGLP1,SHC2,LMTK3,ANAPC7,PLEKHH3,DNAJB2,ANAPC2,UFD1,MYO19,COX17,OGFOD3,SAMD1,RABAC1,PLEKHJ1,ELMOD3,TRPM4,NDUFB7,NSUN5,CLN6,PGLS,NINL,TELO2,ETFB,LRRC29,AUP1,TIGD1,RPL36A,THAP3,PCP2,CLASRP,DFFB,PYCR3,ZMAT1,TMA7,YBEY,POMZP3,SOX12,SPIRE2,POLR2E,RNPEPL1,AARSD1,RPS19BP1,TMEM11,PARP6,TMEM238,NDUFV3,DGCR6L,SIRT6,COLCA2,NELFA,TRAPPC2 | | Exist in public source | | NA |
| lncRNA targets the promoter region and positively regulates the gene expression. |
| Only predicted by TDF | | DPH7,MICA,DNASE1,CENPB,CCDC88B,ATP6V1F,PEX16,PEX11G,JMJD6,DGCR8,CCDC167,NUPR1,PGLS,E2F4,ULK1,EME1,FAM110A,PDDC1,RNF113A,SART1,PQBP1,HEMK1,MED16,SH3GLB2,EIF3G,FAM73B,CENPM,PPIP5K1,SETD6,URGCP,IZUMO4,PIH1D1,TATDN2,COX6A1,ALKBH4,HIP1R,TUSC2,MAPK8IP3,MIIP,PRDX5,MZF1,HINT2,TMEM134,SLC29A2,C3orf62,ANKRD54,FAM160B2,ZSWIM1,C12orf43,GSTK1,SAPCD2,MYL5,FBXO46,C14orf2,CPNE1,MANBAL,NDUFB11,TBKBP1,SS18L1,PPCDC,NT5M,NAA10,CHFR,GRIPAP1,NT5C,NINL,LEMD2,FAM234A,MACROD1,SYMPK,PROCA1,RPL35,FAM111A,ARPC5L,UQCC2,POLR2J,PTCD1,HCFC1R1,MAP2K2,GADD45GIP1,FZR1,CAPNS1,TRADD,C16orf91,ATP5I,TAZ,YDJC,TBL3,G6PC3,COMTD1,DHPS,RABL6,KHDC1,DMPK,PLLP,FANCA,CLPP,LMBR1L,PFDN4,FBXL12,MRPL52,UBXN1,COX7C,ZMIZ2,EP400NL,ORMDL1,E4F1,NOSIP,THAP4,KLHDC4,HMOX2,UBXN6,SPC24,AIP,DYRK4,RBM10,GPAA1,GFER,NDUFB1,COX7B,SRP14,CLASRP,CDC34,TMEM161A,RAD9A,NOL3,UBALD2,QTRT1,NDUFAB1,ABHD12,NCLN,RBM42,ACCS,ENGASE,INO80C,OGFOD3,C19orf25,FBXL8,IFI27L1,THOC6,SCNM1,SBK1,WDR13,ELMOD3,C12orf45,BABAM1,AARSD1,MZT2A,SGF29,PCBD2,C8orf76,ZMYND19,TRIM11,SLC25A10,NMRAL1,NPDC1,TNIP2,MRPL4,DGAT1,HMGB3,CCDC174,THOP1,ZMAT1,HAUS5,SPIRE2,FASTKD1,ENDOG,ECSIT,GPX4,CYC1,LONP1,TRMU,DYNLRB1,SLC37A4,ZNRF1,EVL,ITPA,MRPS36,CNFN,TONSL,C7orf43,PRR7,SHFM1,TIMM17B,THAP3,VPS28,VPS33B,LUC7L,DOT1L,LAMTOR4,COX17,MTG2,COQ3,OCEL1,C6orf203,SLC25A14,BANF1,FAM71E1,MCM7,PTDSS2,HSCB,COX8A,RNF126,PBX4,GGA1,METTL1,CCDC130,ECI1,CWC15,ABCD4,IDH3B,FAM195B,NUDT22,TRIOBP,NR2C2AP,TSTA3,INTS1,SLX4,ARIH2OS,PPP1R12C,RBM6,ALKBH2,NDUFA8,C20orf96,UFSP1,TTC1,NUDT1,PIF1,CDAN1,UBA52,UXT,ANKRD39,SGSM3,KRT18,GABPB1,GTF2H4,VPS4A,POLRMT,SULT1A1,ABHD11,METTL12,PLXNA3,DTX2,ZNF3,C11orf98,AURKB,OXLD1,DUS1L,SPATA25,NR2F6,ELOF1,ALDOA,BCAT2,C9orf114,IL3RA,MRPL51,BBC3,C7orf50,LRRC27,TPRA1,B4GALT7,ENOSF1,ATP13A1,TMEM160,DNAJC4,MRPL27,ANAPC7,UQCR11,NDUFA1,PLIN5,TIMM13,ARHGAP4,MPHOSPH10,VAMP1,AURKAIP1,RPSA,TMEM120B,CCDC94,PRR14,C17orf53,PSMA2,CCDC137,H2AFX,HCN3,C19orf18,KPTN,COQ7,NDUFS5,CITED4,ZNF48,HSF4,RRP7A,FUZ,RANGAP1,DDIT3,NUPL2,KRI1,UPP1,MRPL47,TRMT112,USMG5,PES1 | | Exist in public source | | NA |
| lncRNA targets the promoter region and negatively regulates the gene expression. |
| Only predicted by TDF | | KDELC2,CLTC,LRP1,TMCC3,LMBRD2,SMARCA2,CD93,UTP20,ANKRD40,LIMS1,DIP2B,USP32,RETSAT,CTTNBP2NL,ATF1,LDOC1L,YLPM1,CCSER2,RDX,EVI5,SSH1,TAB2,MFAP3,LRRC58,EXOC5,PRKD3,WNK1,MARCH8,DNAJC16,OS9,TMED5,ARL6IP5,LANCL1,UBR1,GPATCH11,MED1,UBR3,CRTAP,FAM161B,SRP72,CTDSP2,SEC22B,PCYT1A,KIDINS220,TNKS2,LATS2,IARS2,SOCS5,RP2,SPTLC1,SGCB,LPCAT3,REST,TMED2,FER,NCK1,KIAA1429,RNF19B,ACOX1,SLK,CRKL,DIEXF,GGCX,ARF6,ITPRIPL2,EXOC6B,STAU1,USP9X,SEC23IP,MTM1,KIF2A,ACBD3,CYB5R3,PIK3R4,COG6,FAM8A1,FNDC3B,RASSF8,SNX19,DDX24,ELF1,GTF2I,URB1,LPIN2,BCL2L13,CEPT1,TOR1AIP1,CSDE1,CLIC4,G3BP2,SLC35A3,PROS1,PRRC2B,PARP4,HSPG2,ARL5A,PI4KA,DDX1,ERC1,GTF2H3,TMOD3,KDM5A,ACLY,SETD7,SMAD1,KLHL28,CAB39,MYO1D,TWSG1,TNS1,MSN,MOB1A,MYOF,BACH1,PJA2,KPNA6,EIF4G2,SPPL2A,ASCC1,FAM179B,ERMAP,TFIP11,MCMBP,SEC31A,TMEM131,B4GALT5,CREG1,NIPA2,CSNK1A1,KIF5B,TRAPPC10,GIMAP6,ESYT1,SGTB,SPTY2D1,SEL1L,SLC25A24,APC,GNL3L,ATP10D,KDM4A,ALDH6A1,ASAH1,A2M,NDUFS1,NDFIP2,RLIM,CCNY,RB1,ITGA9,ZMAT3,SLC9A6,NEK4,ZYG11B,DCAF7,RAB6A,SMARCC2,ZFYVE9,SF3A1,VPS13C,SLC12A6,GBE1,SDAD1,YIPF5,ITCH,ACTN4,GNG10,RIN2,EPRS,PLS1,UHRF1BP1L,H6PD,YME1L1,RAB3GAP1,PAK2,KDSR,SPG11,RAB10,NCOR1,KDM1B,GPN3,NEK7,TLR4,COPA,MOAP1,LZIC,GIT2,PDLIM5,NRAS,MAML2,OSBPL11,UTRN,EML1,CHD8,IPO5,CLPX,CMPK1,SH3BGRL,NMD3,GNA13,IPO7,SLFN5 | | Exist in public source | | NA |
| lncRNA targets the 3'UTR region and negatively regulates the mRNA. |
| Only predicted by lncTar | | NEK4,PPT1,PSMD2,ANTXR1,RNF123,TBC1D5,BECN1,RFC1,RDX,PPP1R12A,GNL3L,EAF1,TRIP11,CYB5R3,TBC1D15,EDEM1,EIF4G1,FCHO2,SLC17A5,PSMC1,VPS13B,SRP72,MAN1A2,TMTC1,PCYOX1,MBTPS2,ATP11B,SNX19,VPS35L,PHF3,AMOTL2,PAK2,CDK4,STRN,CALD1,SLFN5,NMD3,GOLIM4,SURF4,COPA,KIDINS220,CYLD,ACOX1,GTF2H3,TMCO3,MRAS,SEC23A,ZCCHC24,SMAD1,ABHD2,TM7SF3,SPPL2A,SLC35A3,TAB2,YAP1,CAND1,MYLK,FOXN3,OSBPL8,AZI2,UTP14C,ACTR2,DCAF7,VAMP7,PLSCR4,PTPRM,IFNAR1,MED1,PCGF5,TGOLN2,HBP1,EIF4G2,CD46,NAA50,TMED8,KIF1B,CAB39,HUWE1,PLIN3,BACH1,YME1L1,FAM161B,CPD,RABEP1,BTD,NOTCH2,EIF2AK2,ATF1,FNDC3B,ZMAT3,ARHGAP31,NOMO2,SLC30A6,VPS4B,KLHL28,POGLUT3,USF3,EHBP1,GMPR2,ACTN1,BZW1,SPTY2D1,SLAIN2,MSH3,FNDC3A,OS9,PAM,ZDHHC20,CTNNB1,TRAPPC8,BCL2L13,PKD2,TP53BP1,SSR3,USP32,G3BP1,RASSF8,USP34,FERMT2,STAT3,RPS6KA3,PRMT5,CCNI,DDX3X,IPO5,ASXL2,UTRN,MYOF,HSPG2,TPM4,MTDH,SLC35A5,MAP3K3,ATP2B4,ITGA9,BPNT2,WDR7,KDSR,TMEM131,USP46,SMG6,CFH,KIAA0586,BMPR2,ST13,TRIP12,GTF2A1,TFIP11,GGCX,CEP68,SOS1,SLC12A6,CSNK1A1,ZEB1,SETD7,ELF1,UGGT1,VRK2,GCC2,CAST,TEX2,UTP25,F2R,COL14A1,RUSF1,TMBIM6,HAUS2,TWSG1,CTDSP2,NCOR1,EMC1,SDAD1,SCAF11,CNOT1,ARL6IP5,NF1,SLC35E1,FEZ2,ITSN1,MYH9,FCF1,VWA5A,DNAJC16,STX17,VPS41,SECISBP2L,ACTR3,UBR1,PCDHGC3,CHD8,DHX40,ADAM10,GDI2,ERBIN,DNAJC14,SGTB,CAP1,ITPRIPL2,LARGE1,WASF2,GCLM,GFPT1,MACF1,VGLL4,NBR1,THTPA,SH3GLB1,NUMB,FLNA,MFSD6,ILK,SEC24D,DOCK7,SEPTIN11,TMF1,CLIP1,NSUN3,ARNT,CORO1C,CCSER2,PRKAR2A,TBC1D2B,RAB5C,URB1,SSR1,USP9X,ROCK2,TNS1,SEC23IP,WNK1,SSH1,CHURC1,TMLHE,KLHL5,EPS15,SERINC1,APOOL,ZYG11B,NID2,PPARA,GALC,NUBPL,AP3M1,SNX2,ANTXR2,NFAT5,KIF2A,PPP2R5C,LAMP2,RAB3D,REST,PLS1,SEC62,SOS2,TMOD3,BACE1,PCYT1A,ACTN4,IL6ST,BLOC1S6,HAT1,CHM,FYTTD1,SNX18,ITFG1,MAGT1,SPG11,FAM172A,VPS13C,ZNFX1,RAB6A,TMEM59,TNS3,VPS26C,QKI,GNPNAT1,DENND4C,NT5C2,HIPK1,KPNA6,LIMS1,TACC1,PSEN1,MYO5A,CEP104,PLEKHB2,AMN1,A2M,CLTC,ATRN,FRMD6,ATP2A2,LZIC,TOR1AIP1,HSPA8,M6PR,SNX29,NRP1,ASCC1,APAF1,BBX,TPP1,UBR4,SEPTIN7,OPTN,IQGAP1,SMARCA2,SDCBP,EML1,STK24,DDOST,ARHGAP5,CLCC1,GPATCH11,MPDZ,LRRC58,KDM1B,COPB2,SEC14L1,NIPA2,ESYT1,ARSB,PDLIM5,KBTBD4,CDC40,DDX24,ZNF106,RASA1,APP,RSU1,MBTPS1,SWAP70,SF3A1,PHC3,ABHD5,KLHDC2,DOCK9,SSPN,ERC1,TNPO1,HPS5,NEK7,SPTLC1,H6PD,RO60,ACADM,SEC31A,ANO6,RTN4,SYNRG,EVC,MIA3,C4orf3,AFAP1,MCFD2,NDUFS1,SLC39A6 | | Exist in public source | | NA |
| lncRNA targets the skipped exon region. | | -lncRNA and exonskipping events are positively correlated. |
| LncRNA Ensembl ID | LncRNA ENST ID | Exon ID | Skipped Exon | dG | ndG | Gene name with skipped exon | TransID with skipped exon | ORF mutation | | ENSG00000261663 | ENST00000565709 | exon_skip_48713 | chr10:34336198-34336243 | -7.99 | -0.2103 | PARD3 | ENST00000374789 | In-frame | | ENSG00000261663 | ENST00000565709 | exon_skip_125679 | chr15:29719776-29720016 | -24.33 | -0.1072 | TJP1 | ENST00000346128 | In-frame |
| -lncRNA and exonskipping events are negatively correlated. |
 |
| LncRNA Ensembl ID | LncRNA ENST ID | Exon ID | Skipped Exon | dG | ndG | Gene name with skipped exon | TransID with skipped exon | LOF | | ENSG00000261663 | ENST00000565709 | exon_skip_377198 | chr3:123130479-123130616 | -13.23 | -0.1181 | PDIA5 | ENST00000316218 | Frame-shift | | ENSG00000261663 | ENST00000565709 | exon_skip_29583 | chr1:114780109-114780215 | -8.63 | -0.1040 | SIKE1 | ENST00000060969 | Frame-shift | | ENSG00000261663 | ENST00000565709 | exon_skip_41813 | chr10:68337857-68337996 | -15.83 | -0.1567 | HNRNPH3 | ENST00000265866 | Frame-shift | | ENSG00000261663 | ENST00000565709 | exon_skip_74009 | chr11:64773429-64773505 | -11.28 | -0.2564 | SF1 | ENST00000377390 | Frame-shift | | ENSG00000261663 | ENST00000565709 | exon_skip_87733 | chr12:120571190-120571291 | -9.99 | -0.1297 | RNF10 | ENST00000325954 | Frame-shift | | ENSG00000261663 | ENST00000565709 | exon_skip_92074 | chr12:50142052-50142110 | -6.86 | -0.1294 | CERS5 | ENST00000317551 | Frame-shift | | ENSG00000261663 | ENST00000565709 | exon_skip_95407 | chr12:95040475-95040597 | -11.49 | -0.1008 | NR2C1 | ENST00000333003 | Frame-shift | | ENSG00000261663 | ENST00000565709 | exon_skip_139422 | chr16:89114338-89114487 | -20.96 | -0.1650 | ACSF3 | ENST00000317447,ENST00000406948 | Frame-shift | | ENSG00000261663 | ENST00000565709 | exon_skip_300663 | chr19:1425877-1425960 | -9.76 | -0.1525 | DAZAP1 | ENST00000233078 | Frame-shift | | ENSG00000261663 | ENST00000565709 | exon_skip_302168 | chr19:10680345-10680443 | -14.03 | -0.1542 | ILF3 | ENST00000590261 | Frame-shift | | ENSG00000261663 | ENST00000565709 | exon_skip_319223 | chr19:43526200-43526349 | -17.45 | -0.1601 | ETHE1 | ENST00000292147 | Frame-shift | | ENSG00000261663 | ENST00000565709 | exon_skip_350725 | chr20:35500048-35500169 | -16.81 | -0.1475 | CEP250 | ENST00000397527 | Frame-shift | | ENSG00000261663 | ENST00000565709 | exon_skip_353131 | chr20:58669290-58669453 | -27.19 | -0.2428 | STX16 | ENST00000371141 | Frame-shift | | ENSG00000261663 | ENST00000565709 | exon_skip_365497 | chr22:38067703-38067770 | -12.79 | -0.2369 | PICK1 | ENST00000356976,ENST00000404072 | Frame-shift | | ENSG00000261663 | ENST00000565709 | exon_skip_370518 | chr22:50247691-50247776 | -15.80 | -0.2394 | HDAC10 | ENST00000216271 | Frame-shift | | ENSG00000261663 | ENST00000565709 | exon_skip_380242 | chr3:186784961-186785101 | -13.66 | -0.1043 | EIF4A2 | ENST00000323963 | Frame-shift | | ENSG00000261663 | ENST00000565709 | exon_skip_382458 | chr3:38131595-38131638 | -9.39 | -0.3130 | ACAA1 | ENST00000333167 | Frame-shift | | ENSG00000261663 | ENST00000565709 | exon_skip_442657 | chr5:74730259-74730398 | -10.90 | -0.2019 | GFM2 | ENST00000296805,ENST00000509430 | Frame-shift | | ENSG00000261663 | ENST00000565709 | exon_skip_444499 | chr5:138164086-138164133 | -6.00 | -0.2308 | BRD8 | ENST00000254900 | Frame-shift | | ENSG00000261663 | ENST00000565709 | exon_skip_470226 | chr7:103307595-103307708 | -11.62 | -0.1435 | PMPCB | ENST00000249269 | Frame-shift | | ENSG00000261663 | ENST00000565709 | exon_skip_5818 | chr1:45568484-45568684 | -18.78 | -0.1236 | AKR1A1 | ENST00000351829,ENST00000372070 | Frame-shift | | ENSG00000261663 | ENST00000565709 | exon_skip_80777 | chr12:26960514-26960628 | -8.93 | -0.1026 | FGFR1OP2 | ENST00000229395 | In-frame | | ENSG00000261663 | ENST00000565709 | exon_skip_89574 | chr12:6653229-6653396 | -17.25 | -0.1099 | ING4 | ENST00000396807 | Frame-shift | | ENSG00000261663 | ENST00000565709 | exon_skip_374552 | chr3:50104247-50104308 | -6.97 | -0.1291 | RBM5 | ENST00000347869 | Frame-shift | | ENSG00000261663 | ENST00000565709 | exon_skip_511289 | chrX:76176880-76176992 | -16.13 | -0.1536 | PBDC1 | ENST00000373358 | Frame-shift | | ENSG00000261663 | ENST00000565709 | exon_skip_290158 | chr17:42953723-42953778 | -6.49 | -0.1411 | AARSD1 | ENST00000427569 | Frame-shift |
| lncRNA targets by miRNA. |
| LncRNA Ensembl ID | miRNA ID | LncRNA ENST ID | Binding site in lncRNA | Score | Energy | Align Len | Public source | | ENSG00000261663 | hsa-mir-1247 | ENST00000565709 | chr16:2241127-2241253 | 197.00 | -118.07 | 132 | NA | | ENSG00000261663 | hsa-mir-1247 | ENST00000565709 | chr16:2240906-2241054 | 194.00 | -125.36 | 148 | NA | | ENSG00000261663 | hsa-mir-1247 | ENST00000565709 | chr16:2240773-2240910 | 184.00 | -117.31 | 133 | NA | | ENSG00000261663 | hsa-mir-1247 | ENST00000565709 | chr16:2240538-2240669 | 181.00 | -124.51 | 114 | NA | | ENSG00000261663 | hsa-mir-1247 | ENST00000565709 | chr16:2240658-2240782 | 167.00 | -105.58 | 110 | NA |
| RNA A-to-I editing events in lncRNA. |
| LncRNAediting ID | LncRNA Ensembl ID | Chromosome | Editing Position | Strand | Gene Type | Gene Name | Transcript ID | Transcript Type | Transcript Name |
| Edited-associated DElncRNAs in cancer. |
| LncRNA Ensembl ID | LncRNA Index | Cancer Type | Chr_Postion_Strand | AVE1 | AVE2 | log2FC | W-value | P-value | Adjc.p-value | Change |
| Correlation between RNA A-to-I editing events's frequecy and lncRNA expression. |
| LncRNA Ensembl ID | LncRNA Index | Correlation | P-value | Adjc.p-value |
| Cis-expression quantitative trait loci(cis-eQTL) of lncRNA. |
| LncRNA Ensembl ID | LncRNA Name | SNP info | Number of Positive corelated Cancer | Positive corelated Cancer | Number of Negative corelated Cancer | Negative corelated Cancer |
| lncRNA regulates differentially expressed genes by function as enhancer. |
| LncRNA Ensembl ID | PC Gene ID | PC Gene Name | Positive correlated cancers | Cancer with PC gene up-regulation | Cancer with PC gene down-regulation | | ENSG00000261663 | ENSG00000047634 | SCML1 | ACC,KICH,KIRC,PAAD,PRAD,THCA | KICH | | | ENSG00000261663 | ENSG00000100416 | TRMU | ACC,BLCA,BRCA,CESC,CHOL,COAD,DLBC,GBM,KICH,KIRC,KIRP,LGG,LIHC,LUAD,LUSC,MESO,PAAD,PCPG,PRAD,READ,TGCT,THCA,THYM,UCEC,UCS | UCEC | | | ENSG00000261663 | ENSG00000102030 | NAA10 | ACC,CHOL,GBM,KICH,KIRC,KIRP,LGG,LIHC,MESO,PAAD,PCPG,PRAD,TGCT,THCA,THYM,UCEC,UCS | UCEC | | | ENSG00000261663 | ENSG00000127586 | CHTF18 | ACC,BLCA,BRCA,CESC,CHOL,DLBC,GBM,KIRC,KIRP,LGG,LIHC,LUAD,LUSC,MESO,OV,PAAD,PCPG,PRAD,SARC,TGCT,THCA,THYM,UCEC,UCS | CESC,UCEC | | | ENSG00000261663 | ENSG00000140983 | RHOT2 | ACC,BLCA,BRCA,CESC,CHOL,COAD,DLBC,GBM,KICH,KIRC,KIRP,LGG,LIHC,LUAD,LUSC,MESO,OV,PAAD,PCPG,PRAD,SARC,TGCT,THCA,THYM,UCEC,UCS | KICH | | | ENSG00000261663 | ENSG00000148291 | SURF2 | ACC,CHOL,DLBC,KIRP,LGG,LIHC,PAAD,READ,TGCT,THCA,THYM,UCEC,UCS | UCEC | | | ENSG00000261663 | ENSG00000156873 | PHKG2 | ACC,BLCA,BRCA,CESC,CHOL,COAD,DLBC,GBM,KICH,KIRC,KIRP,LGG,LIHC,LUAD,LUSC,MESO,OV,PAAD,PCPG,PRAD,READ,SARC,TGCT,THCA,THYM,UCEC,UCS | CESC,UCEC | | | ENSG00000261663 | ENSG00000160072 | ATAD3B | ACC,BLCA,BRCA,CESC,COAD,DLBC,GBM,KIRC,KIRP,LGG,LIHC,LUAD,LUSC,MESO,OV,PAAD,PCPG,PRAD,READ,TGCT,THCA,THYM,UCEC,UCS | CESC | | | ENSG00000261663 | ENSG00000162062 | TEDC2 | ACC,BLCA,BRCA,CESC,CHOL,DLBC,GBM,KIRP,LGG,LIHC,LUAD,LUSC,MESO,OV,PAAD,PRAD,SARC,THYM,UCEC,UCS | CESC,UCEC | | | ENSG00000261663 | ENSG00000164896 | FASTK | ACC,BLCA,BRCA,CHOL,DLBC,KICH,KIRC,KIRP,LGG,LIHC,PAAD,THCA,THYM,UCEC,UCS | KICH | | | ENSG00000261663 | ENSG00000165644 | COMTD1 | ACC,CESC,CHOL,DLBC,KICH,KIRP,LGG,LIHC,PAAD,SARC,TGCT,THCA,THYM,UCEC | CESC,KICH,UCEC | | | ENSG00000261663 | ENSG00000165724 | ZMYND19 | ACC,CHOL,DLBC,GBM,KICH,KIRC,KIRP,LGG,LIHC,PAAD,THCA,THYM,UCS | KICH | | | ENSG00000261663 | ENSG00000167702 | KIFC2 | ACC,BLCA,BRCA,CHOL,COAD,GBM,KICH,KIRC,KIRP,OV,PAAD,SARC,THCA,UCS | KICH | | | ENSG00000261663 | ENSG00000172890 | NADSYN1 | ACC,BLCA,GBM,KICH,KIRC,KIRP,LGG,PAAD,THCA,THYM | KICH | | | ENSG00000261663 | ENSG00000177595 | PIDD1 | ACC,BLCA,BRCA,CESC,CHOL,COAD,DLBC,GBM,KICH,KIRC,KIRP,LGG,LIHC,PAAD,SARC,THCA,THYM,UCS | CESC | | | ENSG00000261663 | ENSG00000177990 | DPY19L2 | ACC,KICH,KIRC,KIRP,THCA | KICH | | | ENSG00000261663 | ENSG00000178188 | SH2B1 | ACC,BLCA,BRCA,CESC,CHOL,COAD,DLBC,GBM,KICH,KIRC,KIRP,LGG,LIHC,LUAD,LUSC,MESO,OV,PAAD,PCPG,PRAD,SARC,THCA,UCS | KICH | | | ENSG00000261663 | ENSG00000182325 | FBXL6 | ACC,BLCA,BRCA,CHOL,DLBC,GBM,KIRC,KIRP,LGG,PAAD,SARC,THCA,THYM,UCEC,UCS | UCEC | | | ENSG00000261663 | ENSG00000184076 | UQCR10 | ACC,CESC,KICH,KIRP,LIHC,MESO,PCPG,PRAD,SARC,THYM | KICH | | | ENSG00000261663 | ENSG00000185522 | LMNTD2 | ACC,BLCA,BRCA,CESC,CHOL,COAD,KICH,KIRC,KIRP,LIHC,OV,PAAD,THCA,UCS | CESC | | | ENSG00000261663 | ENSG00000243449 | C4orf48 | ACC,BRCA,CESC,CHOL,KIRP,LGG,LIHC,MESO,PCPG,PRAD,THCA,THYM,UCS | CESC | | | ENSG00000261663 | ENSG00000244165 | P2RY11 | ACC,BLCA,CHOL,GBM,KICH,KIRC,KIRP,LGG,LUSC,MESO,PAAD,PCPG,PRAD,THCA,THYM,UCEC,UCS | KICH | | | ENSG00000261663 | ENSG00000267855 | NDUFA7 | ACC,BLCA,BRCA,CESC,CHOL,DLBC,KICH,KIRC,KIRP,LGG,LIHC,MESO,PAAD,PCPG,PRAD,READ,SARC,THCA,THYM,UCEC,UCS | CESC | | | ENSG00000261663 | ENSG00000005075 | POLR2J | BLCA,BRCA,CESC,CHOL,DLBC,KICH,KIRP,LGG,LIHC,PAAD,READ,TGCT,THCA,THYM,UCEC,UCS | KICH | | | ENSG00000261663 | ENSG00000008324 | SS18L2 | BLCA,CESC,DLBC,KIRP,LGG,MESO,PCPG,PRAD,READ,TGCT,THCA,THYM,UCEC,UCS | UCEC | | | ENSG00000261663 | ENSG00000074071 | MRPS34 | BLCA,BRCA,CESC,CHOL,DLBC,KICH,KIRP,LGG,LIHC,LUSC,MESO,PAAD,PCPG,PRAD,TGCT,THCA,THYM,UCEC,UCS | CESC,UCEC | | | ENSG00000261663 | ENSG00000088682 | COQ9 | BLCA,CHOL,KICH,KIRC,KIRP,LGG,PAAD,SARC,THYM | KICH | | | ENSG00000261663 | ENSG00000099974 | DDTL | BLCA,BRCA,CESC,COAD,DLBC,GBM,KICH,KIRC,KIRP,LGG,LUAD,LUSC,PAAD,PRAD,SARC,THYM,UCEC,UCS | KICH | | | ENSG00000261663 | ENSG00000100068 | LRP5L | BLCA,BRCA,COAD,DLBC,KICH,KIRP,LUAD,LUSC,PAAD,PRAD,THCA | KICH | | | ENSG00000261663 | ENSG00000103148 | NPRL3 | BLCA,BRCA,CESC,CHOL,GBM,KICH,KIRP,LGG,LIHC,LUAD,LUSC,MESO,PAAD,PCPG,PRAD,THCA,THYM,UCS | KICH | | | ENSG00000261663 | ENSG00000103227 | LMF1 | BLCA,BRCA,CHOL,GBM,KICH,KIRC,KIRP,LUAD,MESO,PAAD,PRAD,THCA | KICH | | | ENSG00000261663 | ENSG00000103254 | ANTKMT | BLCA,BRCA,CESC,CHOL,DLBC,GBM,KICH,KIRC,KIRP,LGG,LIHC,LUAD,LUSC,MESO,PAAD,PCPG,PRAD,TGCT,THCA,THYM,UCS | KICH | | | ENSG00000261663 | ENSG00000103326 | CAPN15 | BLCA,BRCA,CHOL,GBM,KICH,KIRC,KIRP,LGG,LIHC,LUAD,LUSC,MESO,OV,PAAD,PCPG,THCA,UCS | KICH | | | ENSG00000261663 | ENSG00000104886 | PLEKHJ1 | BLCA,CESC,CHOL,DLBC,KICH,KIRC,LGG,LIHC,LUSC,MESO,PAAD,PRAD,THYM,UCEC,UCS | KICH,UCEC | | | ENSG00000261663 | ENSG00000104964 | TLE5 | BLCA,CHOL,KICH,KIRC,KIRP,LIHC,MESO,PAAD,PCPG,PRAD,SARC,THCA,THYM,UCS | KICH | | | ENSG00000261663 | ENSG00000104980 | TIMM44 | BLCA,CHOL,KICH,KIRC,KIRP,LGG,MESO,PAAD,PCPG,PRAD,SARC,TGCT,THCA,THYM | KICH | | | ENSG00000261663 | ENSG00000106077 | ABHD11 | BLCA,CHOL,DLBC,KICH,KIRC,KIRP,LIHC,PAAD,SARC,THCA,THYM,UCS | KICH | | | ENSG00000261663 | ENSG00000110011 | DNAJC4 | BLCA,CESC,CHOL,DLBC,KICH,KIRC,KIRP,LGG,PAAD,THCA,THYM,UCS | KICH | | | ENSG00000261663 | ENSG00000116898 | MRPS15 | BLCA,CHOL,DLBC,KIRC,KIRP,LIHC,MESO,PCPG,PRAD,SARC,TGCT,THCA,THYM,UCEC,UCS | UCEC | | | ENSG00000261663 | ENSG00000119559 | C19orf25 | BLCA,BRCA,CESC,CHOL,KICH,LGG,LIHC,MESO,PAAD,PCPG,PRAD,THCA,THYM,UCEC,UCS | KICH | | | ENSG00000261663 | ENSG00000123415 | SMUG1 | BLCA,BRCA,CESC,CHOL,KICH,KIRC,KIRP,LGG,LIHC,PAAD,PRAD,THCA,THYM,UCEC | KICH | | | ENSG00000261663 | ENSG00000125967 | NECAB3 | BLCA,BRCA,CHOL,DLBC,KICH,KIRC,KIRP,LUAD,LUSC,MESO,PAAD,PRAD,SARC,THCA,THYM | KICH | | | ENSG00000261663 | ENSG00000126267 | COX6B1 | BLCA,CESC,CHOL,KICH,LIHC,MESO,PAAD,PCPG,PRAD,READ,SARC,THCA,THYM,UCEC | UCEC | | | ENSG00000261663 | ENSG00000127554 | GFER | BLCA,BRCA,CESC,CHOL,DLBC,GBM,KICH,KIRP,LGG,LIHC,LUSC,MESO,PAAD,PCPG,PRAD,SARC,TGCT,THCA,THYM,UCEC,UCS | KICH | | | ENSG00000261663 | ENSG00000127580 | WDR24 | BLCA,BRCA,CESC,CHOL,DLBC,GBM,KICH,KIRC,KIRP,LGG,LUAD,LUSC,MESO,OV,PAAD,PRAD,THCA,THYM | KICH | | | ENSG00000261663 | ENSG00000127922 | SEM1 | BLCA,KICH,KIRP,LGG,LIHC,PAAD,READ,TGCT,THCA,THYM,UCEC,UCS | KICH,UCEC | | | ENSG00000261663 | ENSG00000130590 | SAMD10 | BLCA,BRCA,CESC,CHOL,GBM,KICH,KIRC,KIRP,LGG,LIHC,LUAD,MESO,PAAD,PCPG,PRAD,SARC,THCA,THYM,UCS | CESC,KICH | | | ENSG00000261663 | ENSG00000130701 | RBBP8NL | BLCA,BRCA,CESC,CHOL,KICH,PAAD,PRAD,THCA,UCEC,UCS | CESC,KICH,UCEC | | | ENSG00000261663 | ENSG00000131143 | COX4I1 | BLCA,CHOL,KICH,KIRP,LGG,LIHC,MESO,PAAD,PCPG,PRAD,SARC,TGCT,THCA,THYM,UCEC,UCS | KICH | | | ENSG00000261663 | ENSG00000131495 | NDUFA2 | BLCA,BRCA,CESC,CHOL,KIRP,LGG,LIHC,PAAD,SARC,THCA,THYM,UCEC,UCS | UCEC | | | ENSG00000261663 | ENSG00000137288 | UQCC2 | BLCA,BRCA,CESC,CHOL,DLBC,KIRC,LGG,LIHC,PAAD,SARC,THCA,THYM,UCEC | CESC | | | ENSG00000261663 | ENSG00000140264 | SERF2 | BLCA,CHOL,DLBC,KICH,LGG,LIHC,PAAD,PCPG,PRAD,SARC,THCA,THYM,UCEC,UCS | UCEC | | | ENSG00000261663 | ENSG00000140451 | PIF1 | BLCA,CESC,COAD,DLBC,GBM,LUSC,OV,TGCT,UCEC,UCS | CESC,UCEC | | | ENSG00000261663 | ENSG00000160298 | C21orf58 | BLCA,BRCA,CESC,COAD,DLBC,GBM,LGG,LUAD,LUSC,MESO,PRAD,UCS | CESC | | | ENSG00000261663 | ENSG00000162065 | TBC1D24 | BLCA,CESC,CHOL,COAD,KIRC,LUAD,MESO | CESC | | | ENSG00000261663 | ENSG00000164855 | TMEM184A | BLCA,BRCA,CHOL,KICH,KIRC,PAAD | KICH | | | ENSG00000261663 | ENSG00000166337 | TAF10 | BLCA,BRCA,CESC,CHOL,KICH,KIRC,KIRP,LGG,LIHC,PAAD,THCA,THYM,UCS | KICH | | | ENSG00000261663 | ENSG00000166801 | FAM111A | BLCA,CESC,COAD,GBM,KIRC,KIRP,LIHC,OV,PAAD,UCS | CESC | | | ENSG00000261663 | ENSG00000167272 | POP5 | BLCA,CESC,CHOL,DLBC,KIRC,KIRP,LGG,LIHC,PAAD,PCPG,PRAD,THCA,THYM,UCEC,UCS | UCEC | | | ENSG00000261663 | ENSG00000168569 | TMEM223 | BLCA,BRCA,CESC,CHOL,DLBC,KICH,KIRC,KIRP,LGG,LIHC,PAAD,SARC,TGCT,THCA,THYM,UCEC | KICH | | | ENSG00000261663 | ENSG00000168781 | PPIP5K1 | BLCA,DLBC,KICH,KIRC,KIRP,LUAD,LUSC,PAAD,UCS | KICH | | | ENSG00000261663 | ENSG00000170906 | NDUFA3 | BLCA,CESC,CHOL,KICH,KIRC,KIRP,LIHC,MESO,PAAD,PCPG,PRAD,READ,SARC,THCA,THYM,UCEC,UCS | KICH,UCEC | | | ENSG00000261663 | ENSG00000177225 | GATD1 | BLCA,BRCA,CESC,CHOL,COAD,DLBC,KICH,KIRC,KIRP,LIHC,PAAD,SARC,THCA,THYM,UCS | KICH | | | ENSG00000261663 | ENSG00000177548 | RABEP2 | BLCA,BRCA,CESC,CHOL,DLBC,GBM,KICH,KIRC,KIRP,LGG,LIHC,LUAD,LUSC,MESO,OV,PAAD,PRAD,THCA,THYM,UCS | KICH | | | ENSG00000261663 | ENSG00000178741 | COX5A | BLCA,CHOL,KICH,LIHC,PRAD,SARC,TGCT,THYM,UCS | KICH | | | ENSG00000261663 | ENSG00000179832 | MROH1 | BLCA,BRCA,KICH,KIRC,KIRP,PAAD,SARC,UCS | KICH | | | ENSG00000261663 | ENSG00000182087 | TMEM259 | BLCA,BRCA,CHOL,DLBC,GBM,KICH,KIRC,KIRP,LGG,LUAD,LUSC,MESO,PAAD,PRAD,THCA,UCS | KICH | | | ENSG00000261663 | ENSG00000182173 | TSEN54 | BLCA,BRCA,CESC,CHOL,DLBC,GBM,KIRC,KIRP,LGG,LIHC,LUAD,LUSC,MESO,PAAD,PCPG,PRAD,SARC,THCA,THYM,UCEC,UCS | CESC | | | ENSG00000261663 | ENSG00000184207 | PGP | BLCA,BRCA,CESC,CHOL,DLBC,KICH,KIRC,KIRP,LIHC,LUAD,LUSC,MESO,PAAD,PCPG,PRAD,SARC,TGCT,THCA,THYM,UCEC,UCS | CESC,KICH,UCEC | | | ENSG00000261663 | ENSG00000186010 | NDUFA13 | BLCA,CESC,CHOL,KICH,KIRP,LGG,LIHC,MESO,PAAD,PCPG,PRAD,READ,SARC,TGCT,THCA,THYM,UCEC,UCS | UCEC | | | ENSG00000261663 | ENSG00000188827 | SLX4 | BLCA,BRCA,CHOL,COAD,GBM,KICH,KIRC,KIRP,LGG,LUAD,LUSC,OV | KICH | | | ENSG00000261663 | ENSG00000204991 | SPIRE2 | BLCA,BRCA,GBM,KICH,KIRP,LGG,LIHC,LUAD,LUSC,MESO,PAAD,PCPG,PRAD,THYM,UCS | KICH | | | ENSG00000261663 | ENSG00000205560 | CPT1B | BLCA,CESC,CHOL,DLBC,KICH | CESC,KICH | | | ENSG00000261663 | ENSG00000214456 | PLIN5 | BLCA,BRCA,KICH,PRAD,THCA | KICH | | | ENSG00000261663 | ENSG00000237289 | CKMT1B | BLCA,KICH,KIRP,PAAD,PCPG,READ,UCS | KICH | | | ENSG00000261663 | ENSG00000239382 | ALKBH6 | BLCA,CESC,DLBC,LUSC,THYM | CESC | | | ENSG00000261663 | ENSG00000240230 | COX19 | BLCA,CHOL,DLBC,KICH,KIRC,KIRP,LIHC,PAAD,READ,THCA,UCS | KICH | | | ENSG00000261663 | ENSG00000267673 | FDX2 | BLCA,CESC,CHOL,DLBC,KICH,KIRC,KIRP,LGG,LIHC,MESO,PAAD,PCPG,PRAD,READ,THCA,THYM,UCEC | UCEC | | | ENSG00000261663 | ENSG00000267795 | SMIM22 | BLCA,BRCA,CESC,DLBC,PAAD,PRAD,READ,THYM,UCEC,UCS | UCEC | | | ENSG00000261663 | ENSG00000008710 | PKD1 | BRCA,CHOL,GBM,KICH,KIRC,KIRP,LGG,LIHC,LUAD,LUSC,MESO,OV,PCPG,THCA | KICH | | | ENSG00000261663 | ENSG00000100908 | EMC9 | BRCA,CESC,CHOL,KICH,LGG,LIHC,PAAD,PCPG,PRAD,SARC,THCA,THYM,UCEC | UCEC | | | ENSG00000261663 | ENSG00000103253 | HAGHL | BRCA,CESC,CHOL,DLBC,GBM,KICH,KIRC,LGG,LUSC,MESO,PAAD,PCPG,PRAD,THYM,UCS | CESC,KICH | | | ENSG00000261663 | ENSG00000103260 | METRN | BRCA,CESC,CHOL,GBM,KICH,KIRP,LGG,LIHC,MESO,PCPG,PRAD,THCA,THYM,UCS | KICH | | | ENSG00000261663 | ENSG00000105963 | ADAP1 | BRCA,CHOL,KICH,PAAD,THCA,UCS | KICH | | | ENSG00000261663 | ENSG00000110717 | NDUFS8 | BRCA,CESC,CHOL,KICH,KIRC,KIRP,LGG,LIHC,PAAD,SARC,TGCT,THCA,THYM,UCEC,UCS | KICH,UCEC | | | ENSG00000261663 | ENSG00000142102 | PGGHG | BRCA,CESC,GBM,KIRC,KIRP,LGG,PAAD,TGCT,THCA,UCS | CESC | | | ENSG00000261663 | ENSG00000149541 | B3GAT3 | BRCA,CHOL,DLBC,KICH,KIRC,LGG,LIHC,PAAD,THCA,THYM,UCEC,UCS | UCEC | | | ENSG00000261663 | ENSG00000167962 | ZNF598 | BRCA,CHOL,GBM,KICH,KIRC,KIRP,LGG,LUAD,LUSC,PAAD,PRAD | KICH | | | ENSG00000261663 | ENSG00000167964 | RAB26 | BRCA,CESC,LUAD,LUSC,OV,PCPG,PRAD | CESC | | | ENSG00000261663 | ENSG00000168924 | LETM1 | BRCA,CHOL,GBM,KICH,KIRC | KICH | | | ENSG00000261663 | ENSG00000174744 | BRMS1 | BRCA,CHOL,KICH,LGG,LIHC,PAAD,READ,TGCT,THCA,THYM,UCEC,UCS | UCEC | | | ENSG00000261663 | ENSG00000176046 | NUPR1 | BRCA,KICH,LIHC,MESO,PRAD,SARC,THYM | KICH | | | ENSG00000261663 | ENSG00000178950 | GAK | BRCA,CHOL,GBM,KICH,KIRC,LGG,LUAD | KICH | | | ENSG00000261663 | ENSG00000179526 | SHARPIN | BRCA,CHOL,DLBC,KICH,KIRP,LGG,PAAD,THCA,THYM | KICH | | | ENSG00000261663 | ENSG00000182154 | MRPL41 | BRCA,CESC,CHOL,KICH,KIRC,KIRP,LGG,PAAD,SARC,THCA,THYM,UCEC,UCS | KICH,UCEC | | | ENSG00000261663 | ENSG00000185347 | TEDC1 | BRCA,CESC,GBM,KIRP,LGG,LUAD,LUSC,PAAD,PCPG,PRAD,READ,THCA,THYM,UCEC,UCS | CESC,UCEC | | | ENSG00000261663 | ENSG00000063241 | ISOC2 | CESC,DLBC,MESO,PAAD,PCPG,PRAD,THCA,THYM,UCEC | UCEC | | | ENSG00000261663 | ENSG00000064490 | RFXANK | CESC,CHOL,KIRP,LGG,LIHC,MESO,PAAD,PCPG,PRAD,READ,THCA,THYM,UCEC | UCEC | | | ENSG00000261663 | ENSG00000089685 | BIRC5 | CESC,LIHC,READ,TGCT,THYM,UCEC | CESC,UCEC | | | ENSG00000261663 | ENSG00000099800 | TIMM13 | CESC,CHOL,DLBC,KICH,LGG,MESO,PAAD,PRAD,TGCT,THCA,THYM,UCEC,UCS | UCEC | | | ENSG00000261663 | ENSG00000105619 | TFPT | CESC,CHOL,LIHC,MESO,PAAD,PRAD,READ,THCA,THYM,UCEC | UCEC | | | ENSG00000261663 | ENSG00000106268 | NUDT1 | CESC,CHOL,DLBC,KIRP,LGG,LIHC,READ,THYM,UCEC,UCS | CESC,UCEC | | | ENSG00000261663 | ENSG00000111057 | KRT18 | CESC,CHOL,LIHC,PRAD,READ,TGCT | CESC | | | ENSG00000261663 | ENSG00000124172 | ATP5F1E | CESC,CHOL,KICH,KIRP,LIHC,PRAD,READ,THCA,THYM,UCEC | KICH,UCEC | | | ENSG00000261663 | ENSG00000131368 | MRPS25 | CESC,CHOL,COAD,DLBC,GBM,KICH,KIRC,KIRP,LGG,LIHC,LUAD,LUSC,MESO,PAAD,PRAD,READ,SARC,THCA,THYM,UCEC | KICH | | | ENSG00000261663 | ENSG00000135617 | PRADC1 | CESC,KIRP,LGG,MESO,PCPG,PRAD,THYM,UCEC | UCEC | | | ENSG00000261663 | ENSG00000142684 | ZNF593 | CESC,LGG,LIHC,MESO,PAAD,PRAD,READ,TGCT,THCA,THYM,UCEC,UCS | UCEC | | | ENSG00000261663 | ENSG00000145494 | NDUFS6 | CESC,CHOL,KICH,LGG,LIHC,MESO,PRAD,READ,TGCT,THCA,THYM,UCEC | UCEC | | | ENSG00000261663 | ENSG00000147123 | NDUFB11 | CESC,CHOL,KICH,LGG,MESO,PAAD,PRAD,TGCT,THCA,THYM,UCEC | UCEC | | | ENSG00000261663 | ENSG00000149761 | NUDT22 | CESC,CHOL,KICH,KIRC,KIRP,LGG,PAAD,THCA,THYM | KICH | | | ENSG00000261663 | ENSG00000161888 | SPC24 | CESC,CHOL,LGG,LIHC,MESO,PRAD,READ,THYM,UCEC | CESC,UCEC | | | ENSG00000261663 | ENSG00000164087 | POC1A | CESC,LIHC,MESO,THYM,UCEC | CESC,UCEC | | | ENSG00000261663 | ENSG00000168061 | SAC3D1 | CESC,CHOL,DLBC,KIRP,LGG,LIHC,PAAD,THCA,THYM,UCEC,UCS | CESC,UCEC | | | ENSG00000261663 | ENSG00000168393 | DTYMK | CESC,CHOL,KIRP,LGG,LIHC,MESO,PRAD,THCA,THYM,UCEC,UCS | CESC,UCEC | | | ENSG00000261663 | ENSG00000172301 | COPRS | CESC,CHOL,KICH,LIHC,MESO,PRAD,SARC,THYM | KICH | | | ENSG00000261663 | ENSG00000177989 | ODF3B | CESC,CHOL,KIRC,KIRP,LUAD,PAAD,PRAD,THYM | CESC | | | ENSG00000261663 | ENSG00000179271 | GADD45GIP1 | CESC,CHOL,KICH,KIRP,LGG,LIHC,MESO,PAAD,PCPG,PRAD,READ,TGCT,THCA,THYM,UCEC | UCEC | | | ENSG00000261663 | ENSG00000198937 | CCDC167 | CESC,CHOL,LGG,SARC,TGCT,THYM,UCEC | UCEC | | | ENSG00000261663 | ENSG00000228300 | FAM174C | CESC,CHOL,DLBC,KICH,LGG,LIHC,MESO,PAAD,PCPG,PRAD,THCA,THYM,UCEC,UCS | KICH,UCEC | | | ENSG00000261663 | ENSG00000233493 | TMEM238 | CESC,CHOL,MESO,PAAD,PRAD,THYM | CESC | | | ENSG00000261663 | ENSG00000250479 | CHCHD10 | CESC,KICH,KIRC,KIRP,PAAD,PCPG,PRAD,SARC,THYM,UCEC,UCS | CESC,KICH,UCEC | | | ENSG00000261663 | ENSG00000038532 | CLEC16A | CHOL,GBM,KICH,KIRC,MESO,SARC | KICH | | | ENSG00000261663 | ENSG00000071889 | FAM3A | CHOL,KICH,KIRP,LGG,MESO,PAAD,PCPG,PRAD,THCA,THYM | KICH | | | ENSG00000261663 | ENSG00000088356 | PDRG1 | CHOL,KICH,KIRP,LIHC,PAAD,PRAD,THCA,THYM | KICH | | | ENSG00000261663 | ENSG00000100147 | CCDC134 | CHOL,KICH,MESO,READ,TGCT | KICH | | | ENSG00000261663 | ENSG00000102934 | PLLP | CHOL,KICH,KIRP,TGCT,UCS | KICH | | | ENSG00000261663 | ENSG00000102996 | MMP15 | CHOL,GBM,KICH,KIRP,PAAD,UCS | KICH | | | ENSG00000261663 | ENSG00000104866 | PPP1R37 | CHOL,KICH,LIHC,MESO,PAAD,PRAD | KICH | | | ENSG00000261663 | ENSG00000105669 | COPE | CHOL,KICH,KIRP,LGG,MESO,PAAD,PRAD,THCA,THYM | KICH | | | ENSG00000261663 | ENSG00000105771 | SMG9 | CHOL,GBM,KICH,KIRC,KIRP,LUAD,PAAD,PCPG,PRAD,READ,THCA,THYM,UCS | KICH | | | ENSG00000261663 | ENSG00000113758 | DBN1 | CHOL,GBM,KICH,KIRP,LGG | KICH | | | ENSG00000261663 | ENSG00000119421 | NDUFA8 | CHOL,KICH,LIHC,SARC,TGCT,THCA,THYM | KICH | | | ENSG00000261663 | ENSG00000125835 | SNRPB | CHOL,KICH,LGG,LIHC,PRAD,THYM,UCS | KICH | | | ENSG00000261663 | ENSG00000128524 | ATP6V1F | CHOL,KICH,LIHC,THYM,UCS | KICH | | | ENSG00000261663 | ENSG00000128973 | CLN6 | CHOL,DLBC,KICH,LGG,LIHC,MESO,PCPG,PRAD,SARC,THCA,THYM,UCS | KICH | | | ENSG00000261663 | ENSG00000129932 | DOHH | CHOL,KICH,LGG,MESO,PAAD,PRAD,TGCT,THYM,UCS | KICH | | | ENSG00000261663 | ENSG00000130159 | ECSIT | CHOL,KICH,LGG,MESO,PRAD,THYM | KICH | | | ENSG00000261663 | ENSG00000130204 | TOMM40 | CHOL,KICH,KIRC,PCPG,PRAD,TGCT,THCA,THYM,UCS | KICH | | | ENSG00000261663 | ENSG00000130560 | UBAC1 | CHOL,KICH,KIRP,LGG,PAAD | KICH | | | ENSG00000261663 | ENSG00000130821 | SLC6A8 | CHOL,KICH,MESO,SARC,TGCT,UCS | KICH | | | ENSG00000261663 | ENSG00000131153 | GINS2 | CHOL,KICH,LIHC,READ,TGCT,THYM | KICH | | | ENSG00000261663 | ENSG00000136270 | TBRG4 | CHOL,DLBC,KICH,KIRC,KIRP,LIHC,PAAD,THCA,THYM | KICH | | | ENSG00000261663 | ENSG00000136522 | MRPL47 | CHOL,DLBC,LIHC,PRAD,READ,TGCT,THYM,UCEC | UCEC | | | ENSG00000261663 | ENSG00000142252 | GEMIN7 | CHOL,DLBC,PAAD,PCPG,PRAD,READ,TGCT,THCA,THYM,UCEC | UCEC | | | ENSG00000261663 | ENSG00000145050 | MANF | CHOL,MESO,READ,TGCT,THYM,UCEC | UCEC | | | ENSG00000261663 | ENSG00000148334 | PTGES2 | CHOL,KICH,KIRC,LGG,LIHC,PAAD,TGCT,THCA,THYM,UCS | KICH | | | ENSG00000261663 | ENSG00000149636 | DSN1 | CHOL,GBM,KIRP,SARC,UCEC | UCEC | | | ENSG00000261663 | ENSG00000160392 | C19orf47 | CHOL,KICH,KIRC,PCPG,THCA | KICH | | | ENSG00000261663 | ENSG00000160439 | RDH13 | CHOL,COAD,DLBC,KICH,KIRP,LIHC,LUAD,MESO,PAAD,PRAD,READ | KICH | | | ENSG00000261663 | ENSG00000166166 | TRMT61A | CHOL,DLBC,GBM,KICH,LGG,PAAD,PCPG,PRAD,THCA,THYM | KICH | | | ENSG00000261663 | ENSG00000167747 | C19orf48 | CHOL,KICH,LGG,LIHC,MESO,PRAD,THYM,UCS | KICH | | | ENSG00000261663 | ENSG00000172270 | BSG | CHOL,KICH,KIRC,LIHC,MESO,PAAD,PCPG,PRAD,THCA,UCS | KICH | | | ENSG00000261663 | ENSG00000173457 | PPP1R14B | CHOL,DLBC,KICH,KIRP,LGG,LIHC,TGCT,THCA,THYM,UCEC | KICH,UCEC | | | ENSG00000261663 | ENSG00000173511 | VEGFB | CHOL,DLBC,KICH,LGG,LIHC,THYM | KICH | | | ENSG00000261663 | ENSG00000173915 | ATP5MK | CHOL,KIRP,LGG,LIHC,READ,THCA,THYM,UCEC,UCS | UCEC | | | ENSG00000261663 | ENSG00000174165 | ZDHHC24 | CHOL,KICH,LIHC,PAAD,THCA,THYM,UCS | KICH | | | ENSG00000261663 | ENSG00000174669 | SLC29A2 | CHOL,COAD,GBM,KICH,PAAD,TGCT,THCA,THYM,UCS | KICH | | | ENSG00000261663 | ENSG00000188549 | CCDC9B | CHOL,GBM,KICH,KIRC,LIHC | KICH | | | ENSG00000261663 | ENSG00000189227 | C15orf61 | CHOL,DLBC,KICH,PCPG,THYM,UCS | KICH | | | ENSG00000261663 | ENSG00000196365 | LONP1 | CHOL,KICH,LGG,MESO,PRAD,THYM | KICH | | | ENSG00000261663 | ENSG00000214290 | COLCA2 | CHOL,KICH,KIRC,KIRP,PAAD | KICH | | | ENSG00000261663 | ENSG00000242802 | AP5Z1 | CHOL,DLBC,GBM,KICH,KIRC,KIRP,LGG,LIHC,PAAD,THCA,THYM | KICH | | | ENSG00000261663 | ENSG00000278259 | MYO19 | CHOL,COAD,GBM,KICH,KIRC,KIRP,LGG,LUAD,LUSC,PAAD,SARC | KICH | | | ENSG00000261663 | ENSG00000136856 | SLC2A8 | DLBC,KICH,PAAD,THCA,THYM | KICH | | | ENSG00000261663 | ENSG00000174177 | CTU2 | DLBC,KICH,KIRP,LGG,LIHC,PAAD,PRAD,TGCT,THCA,THYM | KICH | | | ENSG00000261663 | ENSG00000110721 | CHKA | GBM,KICH,KIRC,KIRP,LGG,PAAD,THCA,UCEC,UCS | KICH,UCEC | | | ENSG00000261663 | ENSG00000111665 | CDCA3 | GBM,LGG,LIHC,LUSC,MESO,TGCT,THYM,UCEC | UCEC | | | ENSG00000261663 | ENSG00000186193 | SAPCD2 | GBM,KICH,TGCT,THYM,UCS | KICH | | | ENSG00000261663 | ENSG00000067221 | STOML1 | KICH,KIRP,PAAD,THCA,THYM | KICH | | | ENSG00000261663 | ENSG00000100911 | PSME2 | KICH,PCPG,PRAD,THYM,UCEC,UCS | UCEC | | | ENSG00000261663 | ENSG00000115541 | HSPE1 | KICH,PRAD,READ,THYM,UCEC,UCS | UCEC | | | ENSG00000261663 | ENSG00000142530 | FAM71E1 | KICH,KIRP,MESO,PRAD,TGCT,THCA,UCS | KICH | | | ENSG00000261663 | ENSG00000156411 | ATP5MJ | KICH,PAAD,PCPG,PRAD,THCA,THYM,UCEC | KICH,UCEC | | | ENSG00000261663 | ENSG00000164919 | COX6C | KICH,KIRC,READ,SARC,THCA,THYM,UCEC,UCS | KICH | | | ENSG00000261663 | ENSG00000166619 | BLCAP | KICH,KIRC,KIRP,PAAD,PRAD,THCA | KICH | | | ENSG00000261663 | ENSG00000183597 | TANGO2 | KICH,KIRC,LIHC,SARC,THYM | KICH | | | ENSG00000261663 | ENSG00000224051 | CPTP | KICH,MESO,PRAD,THCA,THYM | KICH | | | ENSG00000261663 | ENSG00000164611 | PTTG1 | LGG,LIHC,READ,SARC,TGCT,THYM,UCEC,UCS | UCEC | |
| LncRNA-TF complex positively regulates the gene expression by target promoter region (#cancer types with positive correlation >= 5). |
| lncRNA ID | TF ID | TF Name | PCgene ID | PCgene Name | Number of Cancer | Canaer Types |
| LncRNA-TF complex negatively regulates the gene expression by target promoter region (#cancer types with negative correlation >= 5). |
| lncRNA ID | TF ID | TF Name | PCgene ID | PCgene Name | Number of Cancer | Canaer Types |
| LncRNA-RBP complex positively regulates the exon skippping events by target skipped eoxon region. |
| LncRNA Ensembl ID | RBP ID | RBP Gene Name | Exon Skipping ID | Skipped Exon | EX Gene Name | EX Affected TransID | ORF_anno | Cancer Type |
| LncRNA-RBP complex negatively regulates the exon skippping events by target skipped eoxon region. |
| LncRNA Ensembl ID | RBP ID | RBP Gene Name | Exon Skipping ID | Skipped Exon | EX Gene Name | EX Affected TransID | ORF_anno | Cancer Type |
| lncRNA regulates differential expressed mRNA by directly targeting 3' UTR region. |
| LncRNA Ensembl ID | LncRNA ENST ID | PC Gene Name | PC Gene ID | PC ENST ID | dG | nDG | Cancer with PC gene up-regulation | Cancer with PC gene Down-regulation | | ENSG00000261663 | ENST00000565709 | SMG6 | ENSG00000070366 | ENST00000536871 | -0.2352 | 712 | - | UCEC | | ENSG00000261663 | ENST00000565709 | CALD1 | ENSG00000122786 | ENST00000417172 | -0.1587 | 719 | - | KICH,CESC,UCEC | | ENSG00000261663 | ENST00000565709 | VWA5A | ENSG00000110002 | ENST00000392744 | -0.3162 | 76 | - | KICH | | ENSG00000261663 | ENST00000565709 | ARSB | ENSG00000113273 | ENST00000565165 | -0.6750 | 391 | - | KICH | | ENSG00000261663 | ENST00000565709 | PKD2 | ENSG00000118762 | ENST00000502363 | -2.9750 | 183 | - | KICH,CESC,UCEC | | ENSG00000261663 | ENST00000565709 | NOTCH2 | ENSG00000134250 | ENST00000579475 | -0.1163 | 223 | - | KICH | | ENSG00000261663 | ENST00000565709 | ANTXR2 | ENSG00000163297 | ENST00000404191 | -0.1689 | 681 | - | KICH,CESC,UCEC | | ENSG00000261663 | ENST00000565709 | ANTXR2 | ENSG00000163297 | ENST00000346652 | -0.1814 | 1 | - | KICH,CESC,UCEC | | ENSG00000261663 | ENST00000565709 | AFAP1 | ENSG00000196526 | ENST00000382543 | -0.1231 | 137 | - | KICH | | ENSG00000261663 | ENST00000565709 | AFAP1 | ENSG00000196526 | ENST00000614385 | -0.1764 | 705 | - | KICH | | ENSG00000261663 | ENST00000565709 | PLS1 | ENSG00000120756 | ENST00000497002 | -0.3237 | 705 | - | KICH | | ENSG00000261663 | ENST00000565709 | EVC | ENSG00000072840 | ENST00000509451 | -0.1046 | 599 | - | KICH,UCEC | | ENSG00000261663 | ENST00000565709 | F2R | ENSG00000181104 | ENST00000319211 | -0.1268 | 1 | - | KICH | | ENSG00000261663 | ENST00000565709 | F2R | ENSG00000181104 | ENST00000505600 | -0.2787 | 44 | - | KICH | | ENSG00000261663 | ENST00000565709 | COL14A1 | ENSG00000187955 | ENST00000434620 | -0.2489 | 1 | - | KICH,CESC,UCEC | | ENSG00000261663 | ENST00000565709 | FLNA | ENSG00000196924 | ENST00000360319 | -0.1116 | 247 | - | KICH,CESC,UCEC | | ENSG00000261663 | ENST00000565709 | FLNA | ENSG00000196924 | ENST00000369856 | -0.1116 | 247 | - | KICH,CESC,UCEC | | ENSG00000261663 | ENST00000565709 | FLNA | ENSG00000196924 | ENST00000422373 | -0.1262 | 247 | - | KICH,CESC,UCEC | | ENSG00000261663 | ENST00000565709 | FLNA | ENSG00000196924 | ENST00000610817 | -0.1262 | 247 | - | KICH,CESC,UCEC | | ENSG00000261663 | ENST00000565709 | FLNA | ENSG00000196924 | ENST00000369850 | -0.1395 | 247 | - | KICH,CESC,UCEC | | ENSG00000261663 | ENST00000565709 | FLNA | ENSG00000196924 | ENST00000344736 | -0.5609 | 534 | - | KICH,CESC,UCEC | | ENSG00000261663 | ENST00000565709 | ACTN1 | ENSG00000072110 | ENST00000438964 | -0.1305 | 316 | - | KICH,UCEC | | ENSG00000261663 | ENST00000565709 | ACTN1 | ENSG00000072110 | ENST00000376839 | -0.2789 | 541 | - | KICH,UCEC | | ENSG00000261663 | ENST00000565709 | ACTN1 | ENSG00000072110 | ENST00000555075 | -0.2609 | 553 | - | KICH,UCEC | | ENSG00000261663 | ENST00000565709 | PLSCR4 | ENSG00000114698 | ENST00000493382 | -0.1544 | 440 | - | KICH,UCEC | | ENSG00000261663 | ENST00000565709 | EHBP1 | ENSG00000115504 | ENST00000405015 | -0.1116 | 541 | - | KICH,UCEC | | ENSG00000261663 | ENST00000565709 | DHX40 | ENSG00000108406 | ENST00000425628 | -0.3336 | 728 | - | KICH | | ENSG00000261663 | ENST00000565709 | SSPN | ENSG00000123096 | ENST00000540266 | -0.1591 | 660 | - | KICH,CESC,UCEC | | ENSG00000261663 | ENST00000565709 | SSPN | ENSG00000123096 | ENST00000535504 | -0.1845 | 625 | - | KICH,CESC,UCEC | | ENSG00000261663 | ENST00000565709 | UTRN | ENSG00000152818 | ENST00000367526 | -0.5100 | 656 | - | KICH | | ENSG00000261663 | ENST00000565709 | FAM161B | ENSG00000156050 | ENST00000286544 | -0.1683 | 1 | - | KICH,CESC,UCEC | | ENSG00000261663 | ENST00000565709 | KDM1B | ENSG00000165097 | ENST00000546309 | -0.7588 | 692 | - | KICH | | ENSG00000261663 | ENST00000565709 | KDM1B | ENSG00000165097 | ENST00000449850 | -0.1004 | 243 | - | KICH | | ENSG00000261663 | ENST00000565709 | TPM4 | ENSG00000167460 | ENST00000300933 | -0.1313 | 1 | - | KICH | | ENSG00000261663 | ENST00000565709 | TPM4 | ENSG00000167460 | ENST00000588032 | -0.2935 | 190 | - | KICH | | ENSG00000261663 | ENST00000565709 | TPM4 | ENSG00000167460 | ENST00000592822 | -0.2088 | 440 | - | KICH | | ENSG00000261663 | ENST00000565709 | PCDHGC3 | ENSG00000240184 | ENST00000611950 | -0.2018 | 658 | - | KICH,UCEC | | ENSG00000261663 | ENST00000565709 | PCDHGC3 | ENSG00000240184 | ENST00000617222 | -0.2087 | 390 | - | KICH,UCEC | | ENSG00000261663 | ENST00000565709 | CFH | ENSG00000000971 | ENST00000359637 | -0.1469 | 461 | - | KICH | | ENSG00000261663 | ENST00000565709 | ACADM | ENSG00000117054 | ENST00000420607 | -0.7409 | 264 | - | KICH | | ENSG00000261663 | ENST00000565709 | ZCCHC24 | ENSG00000165424 | ENST00000372333 | -0.1394 | 238 | - | KICH,CESC,UCEC | | ENSG00000261663 | ENST00000565709 | A2M | ENSG00000175899 | ENST00000318602 | -0.3746 | 94 | - | KICH,CESC,UCEC | | ENSG00000261663 | ENST00000565709 | MYLK | ENSG00000065534 | ENST00000346322 | -0.1088 | 218 | - | KICH,CESC,UCEC | | ENSG00000261663 | ENST00000565709 | MYLK | ENSG00000065534 | ENST00000583087 | -0.2554 | 237 | - | KICH,CESC,UCEC |
| lncRNA regulates mRNA by competing the miRNA binding site with mRNA. |
| LncRNA Ensembl ID | lncRNA-miRNA-mRNA | Cancer Types |
| ORFfinder result for the gencode.v22.lncRNA.transcript.fa. |
| lncRNA Ensembl ID | lncRNA ENST ID | length(AA) | start at transcript | end at transcript | | ENSG00000261663.1 | ENST00000565709.1 | 161 | 11 | 496 |
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