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lncRNA: ENSG00000261526

Summary for CTB-31O20.2

Gene summary

Gene information	Ensembl ID	ENSG00000261526
	Gene symbol	CTB-31O20.2
	Gene name
	HGNC
	Entrez ID
	Gene type	lincRNA
	Synonyms
	UniProtAcc

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Structure and expression level for CTB-31O20.2

Differentially expressed gene analysis between cancer and normal samples.

Ensembl ID	Base mean	log2FC(AD/control)	lfcSE	Stat	P-value	Adjc.p-value	DEG direction	Cancer type
ENSG00000261526	3.449804e+02	1.404599e+00	3.972027e-01	3.536226e+00	4.058870e-04	1.703625e-03	UP	GBM
ENSG00000261526	1.439520e+02	1.177591e+00	1.255719e-01	9.377825e+00	6.730000e-21	4.610000e-20	UP	LUSC
ENSG00000261526	9.592953e+01	1.279406e+00	1.390951e-01	9.198065e+00	3.640000e-20	7.060000e-19	UP	LIHC

Correlation between lncRNAs and cancer stages.

LncRNA Ensembl ID	Correlation	P-value	Cancer Type	Adjc.p-value
ENSG00000261526	3.055657e-01	6.883378e-03	ACC	1.785519e-02
ENSG00000261526	6.541623e-01	1.096693e-06	CHOL	2.195998e-05
ENSG00000261526	-4.360986e-01	1.938311e-05	KICH	3.945147e-05
ENSG00000261526	3.304140e-01	1.210761e-11	LIHC	5.694680e-11

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lncRNA-Protein interaction for CTB-31O20.2

lncRNA-epigenetic factor interaction (#cancer types with positive correlation >= 5).

LncRNA Ensembl ID	LncRNA ENST ID	LncRNA Name	Protein Ensembl ID	Protein Name	CatRAPID Score	Lncpro Score	UniPortID	Gene Subtype	Public source
ENSG00000261526	ENST00000565797	CTB-31O20.2	ENSG00000104885	DOT1L	60.64	92.52	Q8TEK3	TF,Epi	NA
ENSG00000261526	ENST00000565797	CTB-31O20.2	ENSG00000173894	CBX2	13.22	91.7915	Q14781	TF,Epi	NA

lncRNA-transcript factor interaction (#cancer types with positive correlation >= 5).

LncRNA Ensembl ID	LncRNA ENST ID	LncRNA Name	Protein Ensembl ID	Protein Name	CatRAPID Score	Lncpro Score	UniPortID	Gene Subtype	Public source
ENSG00000261526	ENST00000565797	CTB-31O20.2	ENSG00000135164	DMTF1	78.75	92.29	Q9Y222	TF	NA
ENSG00000261526	ENST00000565797	CTB-31O20.2	ENSG00000104885	DOT1L	60.64	91.7217	Q8TEK3	TF,Epi	NA
ENSG00000261526	ENST00000565797	CTB-31O20.2	ENSG00000198521	ZNF43	49.03	91.5896	P17038	TF	NA
ENSG00000261526	ENST00000565797	CTB-31O20.2	ENSG00000236287	ZBED5	40.11	90.6499	Q49AG3	TF	NA
ENSG00000261526	ENST00000565797	CTB-31O20.2	ENSG00000198040	ZNF84	37.82	91.9393	P51523	TF	NA
ENSG00000261526	ENST00000565797	CTB-31O20.2	ENSG00000025156	HSF2	26.92	92.8539	Q03933	TF	NA
ENSG00000261526	ENST00000565797	CTB-31O20.2	ENSG00000171970	ZNF57	26.37	93.1736	Q68EA5	TF	NA
ENSG00000261526	ENST00000565797	CTB-31O20.2	ENSG00000186272	ZNF17	22.37	91.8923	P17021	TF	NA
ENSG00000261526	ENST00000565797	CTB-31O20.2	ENSG00000256223	ZNF10	19.96	94.1805	P21506	TF	NA
ENSG00000261526	ENST00000565797	CTB-31O20.2	ENSG00000105708	ZNF14	17.35	90.2288	P17017	TF	NA
ENSG00000261526	ENST00000565797	CTB-31O20.2	ENSG00000173894	CBX2	13.22	91.0392	Q14781	TF,Epi	NA
ENSG00000261526	ENST00000565797	CTB-31O20.2	ENSG00000196378	ZNF34	12.03	92.5039	Q8IZ26	TF	NA
ENSG00000261526	ENST00000565797	CTB-31O20.2	ENSG00000179886	TIGD5	10.32	92.0486	Q53EQ6	TF	NA
ENSG00000261526	ENST00000565797	CTB-31O20.2	ENSG00000185252	ZNF74	10.26	91.6253	Q16587	TF,RBP	NA
ENSG00000261526	ENST00000565797	CTB-31O20.2	ENSG00000175691	ZNF77	8.08	94.0655	Q15935	TF	NA

lncRNA-RNA binding protein interaction (#cancer types with positive correlation >= 5).

LncRNA Ensembl ID	LncRNA ENST ID	LncRNA Name	Protein Ensembl ID	Protein Name	CatRAPID Score	Lncpro Score	UniPortID	Gene Subtype	Public source
ENSG00000261526	ENST00000565797	CTB-31O20.2	ENSG00000013573	DDX11	83.63	94.6401	Q96FC9	RBP	NA
ENSG00000261526	ENST00000565797	CTB-31O20.2	ENSG00000139746	RBM26	61.76	94.4509	Q5T8P6	RBP	NA
ENSG00000261526	ENST00000565797	CTB-31O20.2	ENSG00000100201	DDX17	48.65	92.359	Q92841	RBP	NA
ENSG00000261526	ENST00000565797	CTB-31O20.2	ENSG00000164548	TRA2A	36.88	91.4457	Q13595	RBP	NA
ENSG00000261526	ENST00000565797	CTB-31O20.2	ENSG00000185252	ZNF74	10.26	90.0929	Q16587	TF,RBP	NA

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lncRNA-DNA interaction for CTB-31O20.2

lncRNA targets the enhancer region and positively regulates the gene expression.

lncRNA targets the promoter region and positively regulates the gene expression.

lncRNA targets the promoter region and negatively regulates the gene expression.

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lncRNA-RNA interaction for CTB-31O20.2

lncRNA targets the 3'UTR region and negatively regulates the mRNA.

lncRNA targets the skipped exon region.

-lncRNA and exonskipping events are positively correlated.

lncRNA and exonskipping events positive correlated

LncRNA Ensembl ID	LncRNA ENST ID	Exon ID	Skipped Exon	dG	ndG	Gene name with skipped exon	TransID with skipped exon	ORF mutation
ENSG00000261526	ENST00000565797	exon_skip_298575	chr18:26035830-26035923	-10.81	-0.1188	SS18	ENST00000415083	In-frame

-lncRNA and exonskipping events are negatively correlated.

lncRNA and exonskipping events negative correlated

LncRNA Ensembl ID	LncRNA ENST ID	Exon ID	Skipped Exon	dG	ndG	Gene name with skipped exon	TransID with skipped exon	LOF
ENSG00000261526	ENST00000565797	exon_skip_62623	chr11:69079833-69079883	-11.76	-0.4200	TPCN2	ENST00000294309	Frame-shift
ENSG00000261526	ENST00000565797	exon_skip_290158	chr17:42953723-42953778	-9.38	-0.2680	AARSD1	ENST00000427569	Frame-shift
ENSG00000261526	ENST00000565797	exon_skip_382458	chr3:38131595-38131638	-12.06	-0.3350	ACAA1	ENST00000333167	Frame-shift
ENSG00000261526	ENST00000565797	exon_skip_384420	chr3:49812647-49812738	-13.23	-0.1633	UBA7	ENST00000333486	Frame-shift
ENSG00000261526	ENST00000565797	exon_skip_133217	chr16:8635038-8635079	-10.38	-0.3053	METTL22	ENST00000381920	Frame-shift
ENSG00000261526	ENST00000565797	exon_skip_309204	chr19:49181348-49181461	-18.58	-0.1720	TRPM4	ENST00000252826	Frame-shift
ENSG00000261526	ENST00000565797	exon_skip_340759	chr2:85552415-85552567	-16.98	-0.1427	GGCX	ENST00000233838	Frame-shift
ENSG00000261526	ENST00000565797	exon_skip_353131	chr20:58669290-58669453	-34.75	-0.2271	STX16	ENST00000371141	Frame-shift
ENSG00000261526	ENST00000565797	exon_skip_380242	chr3:186784961-186785101	-15.10	-0.1348	EIF4A2	ENST00000323963	Frame-shift
ENSG00000261526	ENST00000565797	exon_skip_4796	chr1:41007448-41007545	-14.40	-0.1870	CTPS1	ENST00000372616,ENST00000372621	Frame-shift
ENSG00000261526	ENST00000565797	exon_skip_9446	chr1:147270931-147271005	-12.38	-0.2134	CHD1L	ENST00000369258	Frame-shift
ENSG00000261526	ENST00000565797	exon_skip_16568	chr1:201989382-201989531	-16.78	-0.1243	RNPEP	ENST00000295640	Frame-shift
ENSG00000261526	ENST00000565797	exon_skip_38175	chr1:234398381-234398553	-13.03	-0.1018	TARBP1	ENST00000040877	Frame-shift
ENSG00000261526	ENST00000565797	exon_skip_41813	chr10:68337857-68337996	-17.04	-0.1704	HNRNPH3	ENST00000265866	Frame-shift
ENSG00000261526	ENST00000565797	exon_skip_41841	chr10:68756272-68756483	-25.17	-0.1353	CCAR1	ENST00000265872	Frame-shift
ENSG00000261526	ENST00000565797	exon_skip_53559	chr10:101793912-101793998	-12.27	-0.1534	OGA	ENST00000361464	Frame-shift
ENSG00000261526	ENST00000565797	exon_skip_66482	chr11:126274926-126275021	-14.36	-0.1596	FOXRED1	ENST00000263578	Frame-shift
ENSG00000261526	ENST00000565797	exon_skip_74009	chr11:64773429-64773505	-14.06	-0.1953	SF1	ENST00000377390	Frame-shift
ENSG00000261526	ENST00000565797	exon_skip_87733	chr12:120571190-120571291	-13.72	-0.2048	RNF10	ENST00000325954	Frame-shift
ENSG00000261526	ENST00000565797	exon_skip_92074	chr12:50142052-50142110	-9.38	-0.2039	CERS5	ENST00000317551	Frame-shift
ENSG00000261526	ENST00000565797	exon_skip_95407	chr12:95040475-95040597	-13.18	-0.1267	NR2C1	ENST00000333003	Frame-shift
ENSG00000261526	ENST00000565797	exon_skip_108095	chr14:73955450-73955509	-11.46	-0.2438	COQ6	ENST00000334571	Frame-shift
ENSG00000261526	ENST00000565797	exon_skip_110959	chr14:20372732-20372857	-18.32	-0.1696	TEP1	ENST00000262715	Frame-shift
ENSG00000261526	ENST00000565797	exon_skip_111863	chr14:23565815-23565892	-16.79	-0.2895	AP1G2	ENST00000308724,ENST00000397120	Frame-shift
ENSG00000261526	ENST00000565797	exon_skip_111870	chr14:23566561-23566686	-21.26	-0.2006	AP1G2	ENST00000397120	Frame-shift
ENSG00000261526	ENST00000565797	exon_skip_114365	chr14:74290026-74290118	-14.86	-0.1955	ABCD4	ENST00000356924	Frame-shift
ENSG00000261526	ENST00000565797	exon_skip_114376	chr14:74293153-74293248	-15.58	-0.2554	ABCD4	ENST00000356924	Frame-shift
ENSG00000261526	ENST00000565797	exon_skip_127618	chr15:58890280-58890461	-17.21	-0.1076	SLTM	ENST00000380516	Frame-shift
ENSG00000261526	ENST00000565797	exon_skip_138351	chr16:70469151-70469323	-29.63	-0.2262	FUK	ENST00000288078	Frame-shift
ENSG00000261526	ENST00000565797	exon_skip_139422	chr16:89114338-89114487	-25.94	-0.1907	ACSF3	ENST00000317447,ENST00000406948	Frame-shift
ENSG00000261526	ENST00000565797	exon_skip_153767	chr17:48057031-48057121	-19.64	-0.2976	NFE2L1	ENST00000362042	In-frame
ENSG00000261526	ENST00000565797	exon_skip_285958	chr17:5404098-5404246	-11.04	-0.1051	NUP88	ENST00000573584	Frame-shift
ENSG00000261526	ENST00000565797	exon_skip_287763	chr17:28884224-28884315	-18.74	-0.2154	FLOT2	ENST00000394908	Frame-shift
ENSG00000261526	ENST00000565797	exon_skip_300663	chr19:1425877-1425960	-15.02	-0.2058	DAZAP1	ENST00000233078	Frame-shift
ENSG00000261526	ENST00000565797	exon_skip_319223	chr19:43526200-43526349	-22.69	-0.1644	ETHE1	ENST00000292147	Frame-shift
ENSG00000261526	ENST00000565797	exon_skip_324294	chr2:27774423-27774530	-12.70	-0.2540	MRPL33	ENST00000296102	Frame-shift
ENSG00000261526	ENST00000565797	exon_skip_326885	chr2:74490024-74490127	-20.27	-0.2007	TTC31	ENST00000233623	Frame-shift
ENSG00000261526	ENST00000565797	exon_skip_327748	chr2:95410863-95411026	-25.34	-0.1920	FAHD2A	ENST00000233379,ENST00000447036	Frame-shift
ENSG00000261526	ENST00000565797	exon_skip_333962	chr2:219247112-219247246	-21.08	-0.2151	STK16	ENST00000396738,ENST00000409638	Frame-shift
ENSG00000261526	ENST00000565797	exon_skip_335558	chr2:240596680-240596942	-36.83	-0.2246	CAPN10	ENST00000391984	Frame-shift
ENSG00000261526	ENST00000565797	exon_skip_357254	chr20:44622587-44622652	-17.36	-0.3046	ADA	ENST00000372874	Frame-shift
ENSG00000261526	ENST00000565797	exon_skip_361485	chr21:29008239-29008307	-10.17	-0.6780	RWDD2B	ENST00000493196	Frame-shift
ENSG00000261526	ENST00000565797	exon_skip_370518	chr22:50247691-50247776	-16.90	-0.2167	HDAC10	ENST00000216271	Frame-shift
ENSG00000261526	ENST00000565797	exon_skip_370525	chr22:50250426-50250523	-18.60	-0.2188	HDAC10	ENST00000216271	Frame-shift
ENSG00000261526	ENST00000565797	exon_skip_374497	chr3:49999439-49999513	-15.05	-0.2840	RBM6	ENST00000266022	Frame-shift
ENSG00000261526	ENST00000565797	exon_skip_374551	chr3:50100531-50100605	-12.40	-0.2000	RBM5	ENST00000347869	Frame-shift
ENSG00000261526	ENST00000565797	exon_skip_377198	chr3:123130479-123130616	-20.38	-0.1544	PDIA5	ENST00000316218	Frame-shift
ENSG00000261526	ENST00000565797	exon_skip_390377	chr3:183092408-183092545	-16.52	-0.2040	MCCC1	ENST00000265594	Frame-shift
ENSG00000261526	ENST00000565797	exon_skip_436035	chr5:79656957-79657001	-6.81	-0.3783	TENT2	ENST00000296783,ENST00000428308,ENST00000453514	Frame-shift
ENSG00000261526	ENST00000565797	exon_skip_438188	chr5:141638954-141639021	-12.75	-0.2198	RELL2	ENST00000297164,ENST00000444782	Frame-shift
ENSG00000261526	ENST00000565797	exon_skip_442657	chr5:74730259-74730398	-13.64	-0.1066	GFM2	ENST00000296805,ENST00000509430	Frame-shift
ENSG00000261526	ENST00000565797	exon_skip_444499	chr5:138164086-138164133	-6.06	-0.2755	BRD8	ENST00000254900	Frame-shift
ENSG00000261526	ENST00000565797	exon_skip_446758	chr5:178212972-178213103	-17.06	-0.1537	PHYKPL	ENST00000308158	Frame-shift
ENSG00000261526	ENST00000565797	exon_skip_466137	chr7:48103296-48103411	-18.25	-0.2199	UPP1	ENST00000331803,ENST00000395564	Frame-shift
ENSG00000261526	ENST00000565797	exon_skip_470226	chr7:103307595-103307708	-14.86	-0.1363	PMPCB	ENST00000249269	Frame-shift
ENSG00000261526	ENST00000565797	exon_skip_511212	chrX:71555189-71555385	-25.14	-0.1601	OGT	ENST00000373719	Frame-shift
ENSG00000261526	ENST00000565797	exon_skip_364260	chr22:29291561-29291599	-11.08	-0.4262	EWSR1	ENST00000397938	Frame-shift
ENSG00000261526	ENST00000565797	exon_skip_374581	chr3:50110378-50110463	-22.23	-0.2779	RBM5	ENST00000347869	Frame-shift
ENSG00000261526	ENST00000565797	exon_skip_152672	chr17:42540949-42541206	-26.59	-0.1392	NAGLU	ENST00000225927	Frame-shift

lncRNA targets by miRNA.

LncRNA Ensembl ID	miRNA ID	LncRNA ENST ID	Binding site in lncRNA	Score	Energy	Align Len	Public source
ENSG00000261526	hsa-mir-22	ENST00000565797	chr19:1874893-1874979	195.00	-97.67	87	NA
ENSG00000261526	hsa-mir-22	ENST00000565797	chr19:1875067-1875152	175.00	-88.45	83	NA
ENSG00000261526	hsa-mir-22	ENST00000565797	chr19:1875381-1875467	172.00	-75.77	80	NA
ENSG00000261526	hsa-mir-22	ENST00000565797	chr19:1875167-1875247	170.00	-85.24	81	NA
ENSG00000261526	hsa-mir-22	ENST00000565797	chr19:1875598-1875685	164.00	-72.17	86	NA
ENSG00000261526	hsa-mir-22	ENST00000565797	chr19:1875467-1875555	157.00	-74.44	89	NA
ENSG00000261526	hsa-mir-22	ENST00000565797	chr19:1875298-1875384	146.00	-79.35	76	NA
ENSG00000261526	hsa-mir-22	ENST00000565797	chr19:1875995-1876091	142.00	-75.86	93	NA
ENSG00000261526	hsa-mir-22	ENST00000565797	chr19:1875781-1875865	140.00	-62.06	67	NA
ENSG00000261526	hsa-mir-584	ENST00000565797	chr19:1875142-1875249	200.00	-116.28	105	NA
ENSG00000261526	hsa-mir-584	ENST00000565797	chr19:1875921-1876021	200.00	-100.72	86	NA
ENSG00000261526	hsa-mir-584	ENST00000565797	chr19:1874895-1875007	197.00	-118.20	108	NA
ENSG00000261526	hsa-mir-584	ENST00000565797	chr19:1875837-1875934	185.00	-98.99	98	NA
ENSG00000261526	hsa-mir-584	ENST00000565797	chr19:1875478-1875562	179.00	-86.99	90	NA
ENSG00000261526	hsa-mir-584	ENST00000565797	chr19:1875560-1875653	171.00	-96.64	97	NA
ENSG00000261526	hsa-mir-584	ENST00000565797	chr19:1875268-1875362	166.00	-88.85	96	NA
ENSG00000261526	hsa-mir-584	ENST00000565797	chr19:1875353-1875447	148.00	-91.30	88	NA
ENSG00000261526	hsa-mir-584	ENST00000565797	chr19:1875672-1875760	147.00	-86.47	88	NA
ENSG00000261526	hsa-mir-584	ENST00000565797	chr19:1875754-1875845	143.00	-78.39	96	NA

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Variants for CTB-31O20.2

RNA A-to-I editing events in lncRNA.

LncRNAediting ID

LncRNA Ensembl ID

Chromosome

Editing Position

Strand

Gene Type

Gene Name

Transcript ID

Transcript Type

Transcript Name

Edited-associated DElncRNAs in cancer.

LncRNA Ensembl ID

LncRNA Index

Cancer Type

Chr_Postion_Strand

AVE1

AVE2

log2FC

W-value

P-value

Adjc.p-value

Change

Correlation between RNA A-to-I editing events's frequecy and lncRNA expression.

LncRNA Ensembl ID

LncRNA Index

Correlation

P-value

Adjc.p-value

Cis-expression quantitative trait loci(cis-eQTL) of lncRNA.

LncRNA Ensembl ID

LncRNA Name

SNP info

Number of Positive corelated Cancer

Positive corelated Cancer

Number of Negative corelated Cancer

Negative corelated Cancer

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lncRNAs regulate the target genes through functioning as enhancers

lncRNA regulates differentially expressed genes by function as enhancer.

LncRNA Ensembl ID

PC Gene ID

PC Gene Name

Positive correlated cancers

Cancer with PC gene up-regulation

Cancer with PC gene down-regulation

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lncRNAs regulate the target genes through recruiting transcript factors

LncRNA-TF complex positively regulates the gene expression by target promoter region (#cancer types with positive correlation >= 5).

lncRNA ID

TF ID

TF Name

PCgene ID

PCgene Name

Number of Cancer

Canaer Types

LncRNA-TF complex negatively regulates the gene expression by target promoter region (#cancer types with negative correlation >= 5).

lncRNA ID

TF ID

TF Name

PCgene ID

PCgene Name

Number of Cancer

Canaer Types

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lncRNAs regulate the alternative splicing event through interacting with splicing factor

LncRNA-RBP complex positively regulates the exon skippping events by target skipped eoxon region.

LncRNA Ensembl ID

RBP ID

RBP Gene Name

Exon Skipping ID

Skipped Exon

EX Gene Name

EX Affected TransID

ORF_anno

Cancer Type

LncRNA-RBP complex negatively regulates the exon skippping events by target skipped eoxon region.

LncRNA Ensembl ID	RBP ID	RBP Gene Name	Exon Skipping ID	Skipped Exon	EX Gene Name	EX Affected TransID	ORF_anno	Cancer Type
ENSG00000261526	ENSG00000139746	RBM26	exon_skip_382458	ENSG00000060971:chr3:38131595-38131638	ACAA1	ENST00000333167	Frame-shift	STAD,UVM,SKCM,THYM,PAAD,THCA
ENSG00000261526	ENSG00000164548	TRA2A	exon_skip_382458	ENSG00000060971:chr3:38131595-38131638	ACAA1	ENST00000333167	Frame-shift	STAD,UVM,MESO,THYM,PCPG,TGCT,THCA

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lncRNAs regulate mRNA through targeting the 3'-UTR region

lncRNA regulates differential expressed mRNA by directly targeting 3' UTR region.

LncRNA Ensembl ID

LncRNA ENST ID

PC Gene Name

PC Gene ID

PC ENST ID

nDG

Cancer with PC gene up-regulation

Cancer with PC gene Down-regulation

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lncRNAs regulate mRNA by competing with miRNA

lncRNA regulates mRNA by competing the miRNA binding site with mRNA.

LncRNA Ensembl ID	lncRNA-miRNA-mRNA	Cancer Types
ENSG00000261526	CTB-31O20.2,hsa-mir-22,WDR33	SKCM,KICH,CHOL,LGG,KIRP
ENSG00000261526	CTB-31O20.2,hsa-mir-22,MSANTD2	SKCM,KICH,CHOL,LGG,KIRP
ENSG00000261526	CTB-31O20.2,hsa-mir-22,E2F5	SKCM,KICH,CHOL,LGG,KIRP
ENSG00000261526	CTB-31O20.2,hsa-mir-22,ZNF22	SKCM,KICH,CHOL,LGG,KIRP
ENSG00000261526	CTB-31O20.2,hsa-mir-22,RXRB	SKCM,KICH,CHOL,LGG,KIRP
ENSG00000261526	CTB-31O20.2,hsa-mir-22,C1orf35	KICH,CHOL,LGG,PAAD,KIRP
ENSG00000261526	CTB-31O20.2,hsa-mir-22,DDX42	SKCM,KICH,CHOL,LGG,KIRP
ENSG00000261526	CTB-31O20.2,hsa-mir-22,ATAT1	SKCM,KICH,CHOL,LGG,KIRP
ENSG00000261526	CTB-31O20.2,hsa-mir-22,YTHDC1	SKCM,KICH,CHOL,LGG,KIRP
ENSG00000261526	CTB-31O20.2,hsa-mir-22,PRR14	KICH,CHOL,LGG,PAAD,KIRP
ENSG00000261526	CTB-31O20.2,hsa-mir-22,SFPQ	SKCM,KICH,CHOL,LGG,KIRP
ENSG00000261526	CTB-31O20.2,hsa-mir-22,NRF1	SKCM,KICH,CHOL,LGG,KIRP
ENSG00000261526	CTB-31O20.2,hsa-mir-22,PM20D2	SKCM,KICH,CHOL,LGG,KIRP
ENSG00000261526	CTB-31O20.2,hsa-mir-22,ZNF7	SKCM,KICH,CHOL,LGG,KIRP
ENSG00000261526	CTB-31O20.2,hsa-mir-22,BRD2	SKCM,KICH,CHOL,LGG,KIRP
ENSG00000261526	CTB-31O20.2,hsa-mir-22,ILKAP	KICH,CHOL,LGG,PAAD,KIRP
ENSG00000261526	CTB-31O20.2,hsa-mir-22,NAA16	SKCM,KICH,CHOL,LGG,KIRP
ENSG00000261526	CTB-31O20.2,hsa-mir-22,RETREG3	KICH,CHOL,LGG,PAAD,KIRP
ENSG00000261526	CTB-31O20.2,hsa-mir-22,FAM117B	SKCM,KICH,CHOL,LGG,KIRP
ENSG00000261526	CTB-31O20.2,hsa-mir-22,BOLA1	KICH,CHOL,LGG,PAAD,KIRP
ENSG00000261526	CTB-31O20.2,hsa-mir-22,NCOA5	SKCM,KICH,CHOL,LGG,KIRP
ENSG00000261526	CTB-31O20.2,hsa-mir-22,KAT2A	KICH,CHOL,LGG,PAAD,KIRP
ENSG00000261526	CTB-31O20.2,hsa-mir-22,SRSF3	SKCM,KICH,CHOL,LGG,KIRP
ENSG00000261526	CTB-31O20.2,hsa-mir-22,EXD3	KICH,CHOL,LGG,PAAD,KIRP
ENSG00000261526	CTB-31O20.2,hsa-mir-22,SRSF6	SKCM,KICH,CHOL,LGG,KIRP
ENSG00000261526	CTB-31O20.2,hsa-mir-22,EXOSC2	SKCM,KICH,CHOL,LGG,KIRP
ENSG00000261526	CTB-31O20.2,hsa-mir-22,HEXIM2	KICH,CHOL,LGG,PAAD,KIRP
ENSG00000261526	CTB-31O20.2,hsa-mir-22,PAXBP1	SKCM,KICH,CHOL,LGG,KIRP
ENSG00000261526	CTB-31O20.2,hsa-mir-22,LUC7L3	SKCM,KICH,CHOL,LGG,KIRP
ENSG00000261526	CTB-31O20.2,hsa-mir-22,PAGR1	KICH,CHOL,LGG,PAAD,KIRP
ENSG00000261526	CTB-31O20.2,hsa-mir-22,ING5	SKCM,KICH,CHOL,LGG,PAAD,KIRP
ENSG00000261526	CTB-31O20.2,hsa-mir-22,CLK2	SKCM,KICH,CHOL,LGG,KIRP
ENSG00000261526	CTB-31O20.2,hsa-mir-22,IRF2BP2	SKCM,KICH,CHOL,LGG,KIRP
ENSG00000261526	CTB-31O20.2,hsa-mir-22,SNRNP48	SKCM,KICH,CHOL,LGG,KIRP
ENSG00000261526	CTB-31O20.2,hsa-mir-22,PCID2	SKCM,KICH,CHOL,LGG,KIRP
ENSG00000261526	CTB-31O20.2,hsa-mir-22,KHDC4	SKCM,KICH,CHOL,LGG,KIRP
ENSG00000261526	CTB-31O20.2,hsa-mir-22,CEP95	SKCM,KICH,CHOL,LGG,KIRP
ENSG00000261526	CTB-31O20.2,hsa-mir-22,HEXD	KICH,CHOL,LGG,PAAD,KIRP
ENSG00000261526	CTB-31O20.2,hsa-mir-22,MRPL53	KICH,CHOL,LGG,PAAD,KIRP
ENSG00000261526	CTB-31O20.2,hsa-mir-22,MBTD1	SKCM,KICH,CHOL,LGG,KIRP
ENSG00000261526	CTB-31O20.2,hsa-mir-22,TIA1	SKCM,KICH,CHOL,LGG,KIRP
ENSG00000261526	CTB-31O20.2,hsa-mir-22,RBBP6	SKCM,KICH,CHOL,LGG,KIRP
ENSG00000261526	CTB-31O20.2,hsa-mir-22,TSEN54	KICH,CHOL,LGG,PAAD,KIRP
ENSG00000261526	CTB-31O20.2,hsa-mir-22,TRIM13	SKCM,KICH,CHOL,LGG,KIRP
ENSG00000261526	CTB-31O20.2,hsa-mir-22,POLG2	SKCM,KICH,CHOL,LGG,KIRP
ENSG00000261526	CTB-31O20.2,hsa-mir-22,MRPL38	KICH,CHOL,LGG,PAAD,KIRP
ENSG00000261526	CTB-31O20.2,hsa-mir-22,RBMX	SKCM,KICH,CHOL,LGG,KIRP
ENSG00000261526	CTB-31O20.2,hsa-mir-22,FBXO46	SKCM,KICH,CHOL,LGG,PAAD,KIRP
ENSG00000261526	CTB-31O20.2,hsa-mir-22,RBM5	SKCM,KICH,CHOL,LGG,KIRP
ENSG00000261526	CTB-31O20.2,hsa-mir-22,SNRPA	KICH,CHOL,LGG,PAAD,KIRP
ENSG00000261526	CTB-31O20.2,hsa-mir-22,RCOR3	SKCM,KICH,CHOL,LGG,KIRP
ENSG00000261526	CTB-31O20.2,hsa-mir-22,SUGP1	KICH,CHOL,LGG,PAAD,KIRP
ENSG00000261526	CTB-31O20.2,hsa-mir-22,CDK5RAP3	KICH,CHOL,LGG,PAAD,KIRP
ENSG00000261526	CTB-31O20.2,hsa-mir-22,CHTOP	SKCM,KICH,CHOL,LGG,KIRP
ENSG00000261526	CTB-31O20.2,hsa-mir-22,ENDOV	KICH,CHOL,LGG,PAAD,KIRP
ENSG00000261526	CTB-31O20.2,hsa-mir-22,POGZ	SKCM,KICH,CHOL,LGG,KIRP
ENSG00000261526	CTB-31O20.2,hsa-mir-22,WDR83	KICH,CHOL,LGG,PAAD,KIRP
ENSG00000261526	CTB-31O20.2,hsa-mir-22,CTDSPL2	SKCM,KICH,CHOL,LGG,KIRP
ENSG00000261526	CTB-31O20.2,hsa-mir-22,PRR3	SKCM,KICH,CHOL,LGG,KIRP
ENSG00000261526	CTB-31O20.2,hsa-mir-22,KDM5B	SKCM,KICH,CHOL,LGG,KIRP
ENSG00000261526	CTB-31O20.2,hsa-mir-22,ING4	SKCM,KICH,CHOL,LGG,KIRP
ENSG00000261526	CTB-31O20.2,hsa-mir-22,SOX4	SKCM,KICH,CHOL,LGG,KIRP
ENSG00000261526	CTB-31O20.2,hsa-mir-22,RRNAD1	KICH,CHOL,LGG,PAAD,KIRP
ENSG00000261526	CTB-31O20.2,hsa-mir-22,PMF1	KICH,CHOL,LGG,PAAD,KIRP
ENSG00000261526	CTB-31O20.2,hsa-mir-22,N4BP2L2	SKCM,KICH,CHOL,LGG,KIRP
ENSG00000261526	CTB-31O20.2,hsa-mir-22,MTA1	SKCM,CHOL,LGG,PAAD,KIRP
ENSG00000261526	CTB-31O20.2,hsa-mir-22,PRPF39	SKCM,KICH,CHOL,LGG,KIRP
ENSG00000261526	CTB-31O20.2,hsa-mir-22,WBP1	KICH,CHOL,LGG,PAAD,KIRP
ENSG00000261526	CTB-31O20.2,hsa-mir-22,ZBTB5	SKCM,KICH,CHOL,LGG,KIRP
ENSG00000261526	CTB-31O20.2,hsa-mir-22,SMAD4	SKCM,KICH,CHOL,LGG,KIRP

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lncRNA coding potential

ORFfinder result for the gencode.v22.lncRNA.transcript.fa.

lncRNA Ensembl ID	lncRNA ENST ID	length(AA)	start at transcript	end at transcript
ENSG00000261526.2	ENST00000565797.2	150	111	563

	lncRNA summary
	lncRNA structure and expression level
	lncRNA-Protein interaction
	lncRNA-DNA interaction
	lncRNA-RNA interaction
	Variants in lncRNA
	lncRNAs regulate the target genes through functioning as enhancers
	lncRNAs regulate the target genes through recruiting transcript factors
	lncRNAs regulate the alternative splicing events through interacting with splicing factor
	lncRNAs regulate mRNA through targeting the 3'-UTR region
	lncRNAs regulate mRNA by competing with miRNA
	lncRNA coding potential