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lncRNA: ENSG00000261485

Summary for PAN3-AS1

Gene summary

Gene information	Ensembl ID	ENSG00000261485
	Gene symbol	PAN3-AS1
	Gene name	PAN3 antisense RNA 1
	HGNC	39932
	Entrez ID
	Gene type	antisense
	Synonyms	PAN3-AS1\|13q12.2
	UniProtAcc

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Structure and expression level for PAN3-AS1

Differentially expressed gene analysis between cancer and normal samples.

Ensembl ID

Base mean

log2FC(AD/control)

lfcSE

Stat

P-value

Adjc.p-value

DEG direction

Cancer type

Correlation between lncRNAs and cancer stages.

LncRNA Ensembl ID

Correlation

P-value

Cancer Type

Adjc.p-value

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lncRNA-Protein interaction for PAN3-AS1

lncRNA-epigenetic factor interaction (#cancer types with positive correlation >= 5).

LncRNA Ensembl ID

LncRNA ENST ID

LncRNA Name

Protein Ensembl ID

Protein Name

CatRAPID Score

Lncpro Score

UniPortID

Gene Subtype

Public source

lncRNA-transcript factor interaction (#cancer types with positive correlation >= 5).

LncRNA Ensembl ID	LncRNA ENST ID	LncRNA Name	Protein Ensembl ID	Protein Name	CatRAPID Score	Lncpro Score	UniPortID	Gene Subtype	Public source
ENSG00000261485	ENST00000563843	PAN3-AS1	ENSG00000123636	BAZ2B	85.71	96.9864	Q9UIF8	TF,Epi	NA
ENSG00000261485	ENST00000563843	PAN3-AS1	ENSG00000135164	DMTF1	66.4	93.8552	Q9Y222	TF	NA
ENSG00000261485	ENST00000563843	PAN3-AS1	ENSG00000099326	MZF1	55.94	94.3251	P28698	TF	ChIP-seq
ENSG00000261485	ENST00000563843	PAN3-AS1	ENSG00000070476	ZXDC	49.11	95.3498	Q2QGD7	TF	NA
ENSG00000261485	ENST00000563843	PAN3-AS1	ENSG00000167232	ZNF91	45.17	96.7814	Q05481	TF	NA
ENSG00000261485	ENST00000563843	PAN3-AS1	ENSG00000196670	ZFP62	39.01	95.3594	Q8NB50	TF	NA
ENSG00000261485	ENST00000563843	PAN3-AS1	ENSG00000147789	ZNF7	34.7	95.2777	P17097	TF	NA
ENSG00000261485	ENST00000563843	PAN3-AS1	ENSG00000198040	ZNF84	33.97	95.4989	P51523	TF	NA
ENSG00000261485	ENST00000563843	PAN3-AS1	ENSG00000146587	RBAK	33.3	95.4709	Q9NYW8	TF	NA
ENSG00000261485	ENST00000563843	PAN3-AS1	ENSG00000065029	ZNF76	27.14	92.117	P36508	TF	NA
ENSG00000261485	ENST00000563843	PAN3-AS1	ENSG00000172273	HINFP	26.13	92.4868	Q9BQA5	TF,Epi	ChIP-seq
ENSG00000261485	ENST00000563843	PAN3-AS1	ENSG00000166432	ZMAT1	25.3	93.4417	Q5H9K5	TF	NA
ENSG00000261485	ENST00000563843	PAN3-AS1	ENSG00000164631	ZNF12	24.08	94.9903	P17014	TF	NA
ENSG00000261485	ENST00000563843	PAN3-AS1	ENSG00000166526	ZNF3	23.22	92.0091	P17036	TF	NA
ENSG00000261485	ENST00000563843	PAN3-AS1	ENSG00000256223	ZNF10	17.57	95.0186	P21506	TF	NA
ENSG00000261485	ENST00000563843	PAN3-AS1	ENSG00000204231	RXRB	15.66	92.9624	P28702	TF	NA
ENSG00000261485	ENST00000563843	PAN3-AS1	ENSG00000197857	ZNF44	15.46	95.0149	P15621	TF	NA
ENSG00000261485	ENST00000563843	PAN3-AS1	ENSG00000167766	ZNF83	8.83	93.6177	P51522	TF	ChIP-seq
ENSG00000261485	ENST00000563843	PAN3-AS1	ENSG00000144161	ZC3H8	7.71	94.5267	Q8N5P1	TF,RBP	NA

lncRNA-RNA binding protein interaction (#cancer types with positive correlation >= 5).

LncRNA Ensembl ID	LncRNA ENST ID	LncRNA Name	Protein Ensembl ID	Protein Name	CatRAPID Score	Lncpro Score	UniPortID	Gene Subtype	Public source
ENSG00000261485	ENST00000563843	PAN3-AS1	ENSG00000004534	RBM6	62.81	96.5966	P78332	RBP	NA
ENSG00000261485	ENST00000563843	PAN3-AS1	ENSG00000139746	RBM26	52.49	95.3775	Q5T8P6	RBP	NA
ENSG00000261485	ENST00000563843	PAN3-AS1	ENSG00000100650	SRSF5	43.11	93.8877	Q13243	RBP	NA
ENSG00000261485	ENST00000563843	PAN3-AS1	ENSG00000100201	DDX17	41.89	94.4345	Q92841	RBP	NA
ENSG00000261485	ENST00000563843	PAN3-AS1	ENSG00000164548	TRA2A	34.68	91.7506	Q13595	RBP	NA
ENSG00000261485	ENST00000563843	PAN3-AS1	ENSG00000099622	CIRBP	29.1	91.8225	Q14011	RBP	NA
ENSG00000261485	ENST00000563843	PAN3-AS1	ENSG00000124193	SRSF6	28.16	94.9735	Q13247	RBP	NA
ENSG00000261485	ENST00000563843	PAN3-AS1	ENSG00000083544	TDRD3	22.03	95.9026	Q9H7E2	RBP,Epi	NA
ENSG00000261485	ENST00000563843	PAN3-AS1	ENSG00000184863	RBM33	16.52	94.435	Q96EV2	RBP	NA
ENSG00000261485	ENST00000563843	PAN3-AS1	ENSG00000121390	PSPC1	11.72	92.3717	Q8WXF1	RBP	NA
ENSG00000261485	ENST00000563843	PAN3-AS1	ENSG00000144161	ZC3H8	7.71	94.7424	Q8N5P1	TF,RBP	NA

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lncRNA-DNA interaction for PAN3-AS1

lncRNA targets the enhancer region and positively regulates the gene expression.

Only predicted by TDF

KBTBD6,AGAP6,NISCH,ATAT1,VAMP1,ATM,SLC26A11,PLCG1,RCBTB1,FANCL,RBM39,MFSD8,KLF12,CDK13,NUP43,SLC25A27,LENG8,PGS1,SH2B1,CIRBP,PHKA2,PRR3,NICN1,WBP4,MZF1,UBE2G2,CEP57,MYSM1,NRF1,TTC31,IP6K2,ZXDC,MAPK8IP3,IQCB1,KAT8,TRIM39,SUGP2,PPP2R3B,N4BP2L2,PPWD1,DMTF1,PIGL,NEK3,ZC3H7A,TAF1D,UNKL,KATNBL1,MKS1,PHF10,CSAD,PIBF1,AHI1,KIAA0895L,MTIF3,INO80D,LMBR1L,SPIN3,NHLRC3,SAMD10,IFT88,BIVM,OBSL1,SUGT1,ABCA5,PHYKPL,SF3B1,GATAD1,CCNL2,CAPN10,RUFY3,CENATAC,NPEPL1,CLK3,RNPC3,WDR5B,ANKRD10,OBI1,INCA1,MSANTD2,TUBGCP6,RECQL5,PAN3,PROSER1,WDR59,MED28,LRCH3,GABBR1,TMEM175,CLK4,DOP1A,LRRC75B,DCAF16,SUPT7L,ZBED5,DDTL,ALG5,UGGT2,ZMYM5,IFT140,TAMM41,CENPT,ZNF10,TTC14,S100PBP,CCNT2,COG4,OSBPL7,MTG1,TAZ,SPG7,PCID2,ZNF44,FAM76B,POGZ,BORA,TRIM13,ZNF91,ACBD4,SIAH1,LTO1,BRWD1,PHC1,METAP1D,OGT,RCCD1,MRPS31,ANAPC2,RBM26,PLA2G6,C21orf58,BCLAF3,TAF1C,COX19,CLK2,RBM25,LCAT,POLG2,ENDOV,MST1,AAAS,IFT80,RNASEH2B,CEP89,CLDN15,HMGB1,KANSL1L,BBIP1,POLI,UBN2,EXD3,CLK1,PRPF39,LRIG2,EZH1,GABPB1,ERMARD,RPAIN,DDX17,OFD1,PCED1A,VPS36,ACYP1,ING4,SLC7A6,SENP7,FCHSD1,TMEM243,MTRF1,RAD52,CEP43,PABIR2,DYNLT2,ZC3H8,HEXIM2,TGIF2,RSRC2,CEP44,SCRN2,NAPB,ANKS3,FANCF,ARGLU1,LIG4,ANKRD49,PAXBP1,CCNL1,WSB1,GPALPP1,SETD5,ZFP62,ANKRA2,FNBP4,C2orf49,RBM22,ZBED8,TGDS,C12orf76,PRMT7,INPP5E,ORMDL1,FAM228B,YTHDC1,PSPC1,RSRP1,TIGD1,RBM45,DDX51,CHD2,AGER,GPS2,TRIM52,AGO3,PMS1,CRYZL1,SPOUT1,TTC32,TSEN54,BAHCC1,TIA1,MED4,ZMAT1,ZNF83,ATG4B,SERP2,GOLGA8B,HEMK1,SUPT20H,NSUN6,HP1BP3,KANSL1,ZNF3,SPATA33,CCDC191,RFX3,NXF1,DCUN1D2,IFT20,ABCD4,PAN2,DIDO1,GOLGA8A,CYP2R1,C2orf68,C15orf62,SETD4,NEIL1,NDUFAF7,RBM6,ALG9,GIGYF1,TRMT13,RBM48,FAM193B,DTX3,PDS5B,AARSD1,DUSP28,CCDC82,NAT9,LIPT1,RBM5,NKTR,ZFC3H1,CEP162,PROCA1,CRAMP1,LUC7L,ARHGAP33,MBTD1,PNN,N4BP2L1,COA5,DNASE1,SEPSECS,LUC7L2,CRBN,TTLL3,EPM2AIP1,HEXD,TUBE1,ARHGEF7,ZNF84,MICU2,CENPJ,BAZ2B,RXRB,PARP6,DPH7,PSME3IP1,SCNN1D,TRA2A,WDR27,NSMCE4A,WDR33,TPP2,REV1,POLM,NEURL4,HINFP,KHDC4,NR2C1,CERS5,APBB3,ASXL1,TSC1,ERCC5,CCDC14,HPS4,NRIP2,PNISR,MAN2C1,AMT,USPL1,MRPL38,PRPF4B,WBP1,PARP16,CCDC57,TEPSIN,RBM33,KBTBD2

Exist in public source

lncRNA targets the promoter region and positively regulates the gene expression.

Only predicted by TDF

DPH7,ALG5,GTF2H4,ZMAT1,PGS1,ZNF3,RAD52,EID2B,GPALPP1,KBTBD6,STX16,RNF219,GPR173,HEMK1,DDX17,MRPS31,RBM5,IFT140,NICN1,TAZ,OSBPL7,KPNA5,C9orf114,ING4,ZNF83,CRYZL1,CEP89,MED4,PAN2,MAPK8IP3,CCDC66,MZF1,RAD9A,CENPJ,VAMP1,FAM122B,KIAA0907,TSEN54,METTL22,SETD4,NEK3,ACCS,BBIP1,ENGASE,C2orf68,ZC3H7A,ALG9,MDM4,GGA1,WSB1,SLC26A11,ABCD4,PROCA1,CDK13,MFSD8,ING5,CCNL1,S100PBP,PPWD1,AARSD1,PAN3,RBM6,UGGT2,ARGLU1,MED28,CIRBP,CEP44

Exist in public source

lncRNA targets the promoter region and negatively regulates the gene expression.

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lncRNA-RNA interaction for PAN3-AS1

lncRNA targets the 3'UTR region and negatively regulates the mRNA.

lncRNA targets the skipped exon region.

-lncRNA and exonskipping events are positively correlated.

LncRNA Ensembl ID

LncRNA ENST ID

Exon ID

Skipped Exon

ndG

Gene name with skipped exon

TransID with skipped exon

ORF mutation

-lncRNA and exonskipping events are negatively correlated.

LncRNA Ensembl ID

LncRNA ENST ID

Exon ID

Skipped Exon

ndG

Gene name with skipped exon

TransID with skipped exon

LOF

lncRNA targets by miRNA.

LncRNA Ensembl ID

miRNA ID

LncRNA ENST ID

Binding site in lncRNA

Score

Energy

Align Len

Public source

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Variants for PAN3-AS1

RNA A-to-I editing events in lncRNA.

LncRNAediting ID

LncRNA Ensembl ID

Chromosome

Editing Position

Strand

Gene Type

Gene Name

Transcript ID

Transcript Type

Transcript Name

Edited-associated DElncRNAs in cancer.

LncRNA Ensembl ID

LncRNA Index

Cancer Type

Chr_Postion_Strand

AVE1

AVE2

log2FC

W-value

P-value

Adjc.p-value

Change

Correlation between RNA A-to-I editing events's frequecy and lncRNA expression.

LncRNA Ensembl ID

LncRNA Index

Correlation

P-value

Adjc.p-value

Cis-expression quantitative trait loci(cis-eQTL) of lncRNA.

LncRNA Ensembl ID

LncRNA Name

SNP info

Number of Positive corelated Cancer

Positive corelated Cancer

Number of Negative corelated Cancer

Negative corelated Cancer

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lncRNAs regulate the target genes through functioning as enhancers

lncRNA regulates differentially expressed genes by function as enhancer.

LncRNA Ensembl ID

PC Gene ID

PC Gene Name

Positive correlated cancers

Cancer with PC gene up-regulation

Cancer with PC gene down-regulation

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lncRNAs regulate the target genes through recruiting transcript factors

LncRNA-TF complex positively regulates the gene expression by target promoter region (#cancer types with positive correlation >= 5).

lncRNA ID	TF ID	TF Name	PCgene ID	PCgene Name	Number of Cancer	Canaer Types
ENSG00000261485	ENSG00000099326	MZF1	ENSG00000148399	DPH7	5	DLBC,GBM,KIRP,SKCM,THCA
ENSG00000261485	ENSG00000172273	HINFP	ENSG00000213780	GTF2H4	5	GBM,KIRP,LGG,THCA,THYM
ENSG00000261485	ENSG00000135164	DMTF1	ENSG00000002016	RAD52	5	COAD,GBM,KIRP,PCPG,SKCM
ENSG00000261485	ENSG00000147789	ZNF7	ENSG00000002016	RAD52	5	COAD,KIRP,PCPG,READ,SKCM
ENSG00000261485	ENSG00000172273	HINFP	ENSG00000002016	RAD52	5	GBM,KIRP,LGG,PCPG,THCA
ENSG00000261485	ENSG00000196670	ZFP62	ENSG00000002016	RAD52	5	COAD,GBM,KIRP,LGG,SKCM
ENSG00000261485	ENSG00000198040	ZNF84	ENSG00000002016	RAD52	6	COAD,GBM,KIRP,PCPG,SKCM,THCA
ENSG00000261485	ENSG00000135164	DMTF1	ENSG00000133114	GPALPP1	5	COAD,GBM,KIRP,READ,SKCM
ENSG00000261485	ENSG00000144161	ZC3H8	ENSG00000133114	GPALPP1	5	COAD,GBM,KIRP,LGG,READ
ENSG00000261485	ENSG00000196670	ZFP62	ENSG00000133114	GPALPP1	6	COAD,DLBC,KIRP,LAML,LGG,SKCM
ENSG00000261485	ENSG00000198040	ZNF84	ENSG00000133114	GPALPP1	7	COAD,DLBC,GBM,KIRP,PCPG,SKCM,THCA
ENSG00000261485	ENSG00000070476	ZXDC	ENSG00000124222	STX16	5	COAD,GBM,KIRP,SKCM,THCA
ENSG00000261485	ENSG00000099326	MZF1	ENSG00000124222	STX16	5	DLBC,GBM,KIRP,SKCM,THCA
ENSG00000261485	ENSG00000135164	DMTF1	ENSG00000124222	STX16	5	COAD,GBM,KIRP,READ,SKCM
ENSG00000261485	ENSG00000167766	ZNF83	ENSG00000124222	STX16	6	COAD,DLBC,GBM,KIRP,READ,SKCM
ENSG00000261485	ENSG00000196670	ZFP62	ENSG00000124222	STX16	5	COAD,GBM,KIRP,LAML,SKCM
ENSG00000261485	ENSG00000198040	ZNF84	ENSG00000124222	STX16	6	COAD,DLBC,GBM,KIRP,SKCM,THCA
ENSG00000261485	ENSG00000256223	ZNF10	ENSG00000124222	STX16	5	DLBC,GBM,KIRP,SKCM,THCA
ENSG00000261485	ENSG00000070476	ZXDC	ENSG00000100201	DDX17	5	COAD,GBM,KIRP,SKCM,THCA
ENSG00000261485	ENSG00000099326	MZF1	ENSG00000100201	DDX17	5	DLBC,GBM,KIRP,SKCM,THCA
ENSG00000261485	ENSG00000167766	ZNF83	ENSG00000100201	DDX17	5	COAD,DLBC,GBM,KIRP,SKCM
ENSG00000261485	ENSG00000196670	ZFP62	ENSG00000100201	DDX17	7	COAD,DLBC,GBM,KIRP,LAML,LGG,SKCM
ENSG00000261485	ENSG00000198040	ZNF84	ENSG00000100201	DDX17	6	COAD,DLBC,GBM,KIRP,SKCM,THCA
ENSG00000261485	ENSG00000256223	ZNF10	ENSG00000100201	DDX17	5	DLBC,GBM,KIRP,SKCM,THCA
ENSG00000261485	ENSG00000144161	ZC3H8	ENSG00000102738	MRPS31	5	COAD,GBM,KIRP,LGG,READ
ENSG00000261485	ENSG00000070476	ZXDC	ENSG00000003756	RBM5	5	COAD,GBM,KIRP,SKCM,THCA
ENSG00000261485	ENSG00000099326	MZF1	ENSG00000003756	RBM5	5	DLBC,GBM,KIRP,SKCM,THCA
ENSG00000261485	ENSG00000135164	DMTF1	ENSG00000003756	RBM5	5	COAD,GBM,KIRP,READ,SKCM
ENSG00000261485	ENSG00000144161	ZC3H8	ENSG00000003756	RBM5	5	COAD,GBM,KIRP,LGG,READ
ENSG00000261485	ENSG00000167766	ZNF83	ENSG00000003756	RBM5	6	COAD,DLBC,GBM,KIRP,READ,SKCM
ENSG00000261485	ENSG00000196670	ZFP62	ENSG00000003756	RBM5	5	COAD,DLBC,GBM,LGG,SKCM
ENSG00000261485	ENSG00000197857	ZNF44	ENSG00000003756	RBM5	5	COAD,GBM,KIRP,READ,SKCM
ENSG00000261485	ENSG00000198040	ZNF84	ENSG00000003756	RBM5	6	COAD,DLBC,GBM,KIRP,SKCM,THCA
ENSG00000261485	ENSG00000256223	ZNF10	ENSG00000003756	RBM5	5	DLBC,GBM,KIRP,SKCM,THCA
ENSG00000261485	ENSG00000099326	MZF1	ENSG00000006025	OSBPL7	5	DLBC,GBM,KIRP,SKCM,THCA
ENSG00000261485	ENSG00000172273	HINFP	ENSG00000006025	OSBPL7	5	GBM,KIRP,LGG,PCPG,THCA
ENSG00000261485	ENSG00000172273	HINFP	ENSG00000111653	ING4	5	KIRP,LGG,PCPG,THCA,THYM
ENSG00000261485	ENSG00000099326	MZF1	ENSG00000167766	ZNF83	5	DLBC,GBM,KIRP,SKCM,THCA
ENSG00000261485	ENSG00000135164	DMTF1	ENSG00000167766	ZNF83	5	COAD,GBM,KIRP,READ,SKCM
ENSG00000261485	ENSG00000196670	ZFP62	ENSG00000167766	ZNF83	5	COAD,DLBC,GBM,KIRP,SKCM
ENSG00000261485	ENSG00000198040	ZNF84	ENSG00000167766	ZNF83	6	COAD,DLBC,GBM,KIRP,SKCM,THCA
ENSG00000261485	ENSG00000256223	ZNF10	ENSG00000167766	ZNF83	5	DLBC,GBM,KIRP,SKCM,THCA
ENSG00000261485	ENSG00000070476	ZXDC	ENSG00000135473	PAN2	5	COAD,GBM,KIRP,SKCM,THCA
ENSG00000261485	ENSG00000135164	DMTF1	ENSG00000135473	PAN2	5	COAD,GBM,KIRP,READ,SKCM
ENSG00000261485	ENSG00000167766	ZNF83	ENSG00000135473	PAN2	5	COAD,GBM,KIRP,READ,SKCM
ENSG00000261485	ENSG00000198040	ZNF84	ENSG00000135473	PAN2	5	COAD,GBM,KIRP,SKCM,THCA
ENSG00000261485	ENSG00000198040	ZNF84	ENSG00000138834	MAPK8IP3	5	DLBC,KIRP,PCPG,SKCM,THCA
ENSG00000261485	ENSG00000070476	ZXDC	ENSG00000180376	CCDC66	5	COAD,GBM,KIRP,SKCM,THCA
ENSG00000261485	ENSG00000135164	DMTF1	ENSG00000180376	CCDC66	5	COAD,GBM,KIRP,READ,SKCM
ENSG00000261485	ENSG00000144161	ZC3H8	ENSG00000180376	CCDC66	5	COAD,GBM,KIRP,LGG,READ
ENSG00000261485	ENSG00000167766	ZNF83	ENSG00000180376	CCDC66	5	COAD,GBM,KIRP,READ,SKCM
ENSG00000261485	ENSG00000196670	ZFP62	ENSG00000180376	CCDC66	5	COAD,GBM,KIRP,LGG,SKCM
ENSG00000261485	ENSG00000197857	ZNF44	ENSG00000180376	CCDC66	5	COAD,GBM,KIRP,READ,SKCM
ENSG00000261485	ENSG00000198040	ZNF84	ENSG00000180376	CCDC66	5	COAD,GBM,KIRP,SKCM,THCA
ENSG00000261485	ENSG00000198040	ZNF84	ENSG00000099326	MZF1	5	DLBC,GBM,KIRP,SKCM,THCA
ENSG00000261485	ENSG00000256223	ZNF10	ENSG00000099326	MZF1	5	DLBC,GBM,KIRP,SKCM,THCA
ENSG00000261485	ENSG00000135164	DMTF1	ENSG00000151849	CENPJ	5	COAD,GBM,KIRP,READ,SKCM
ENSG00000261485	ENSG00000135164	DMTF1	ENSG00000132680	KHDC4	5	COAD,GBM,KIRP,READ,SKCM
ENSG00000261485	ENSG00000167766	ZNF83	ENSG00000132680	KHDC4	5	COAD,GBM,KIRP,READ,SKCM
ENSG00000261485	ENSG00000196670	ZFP62	ENSG00000132680	KHDC4	5	COAD,GBM,KIRP,LAML,SKCM
ENSG00000261485	ENSG00000197857	ZNF44	ENSG00000132680	KHDC4	5	COAD,GBM,KIRP,READ,SKCM
ENSG00000261485	ENSG00000172273	HINFP	ENSG00000182173	TSEN54	5	GBM,KIRP,LGG,PCPG,THCA
ENSG00000261485	ENSG00000196670	ZFP62	ENSG00000185917	SETD4	6	COAD,GBM,KIRP,LAML,LGG,SKCM
ENSG00000261485	ENSG00000198040	ZNF84	ENSG00000185917	SETD4	5	COAD,GBM,KIRP,SKCM,THCA
ENSG00000261485	ENSG00000135164	DMTF1	ENSG00000136098	NEK3	5	COAD,GBM,KIRP,READ,SKCM
ENSG00000261485	ENSG00000099326	MZF1	ENSG00000167280	ENGASE	5	DLBC,GBM,KIRP,SKCM,THCA
ENSG00000261485	ENSG00000198040	ZNF84	ENSG00000167280	ENGASE	5	DLBC,GBM,KIRP,SKCM,THCA
ENSG00000261485	ENSG00000256223	ZNF10	ENSG00000167280	ENGASE	5	DLBC,GBM,KIRP,SKCM,THCA
ENSG00000261485	ENSG00000172273	HINFP	ENSG00000168887	C2orf68	5	GBM,KIRP,LGG,THCA,THYM
ENSG00000261485	ENSG00000198040	ZNF84	ENSG00000109046	WSB1	5	COAD,GBM,KIRP,SKCM,THCA
ENSG00000261485	ENSG00000198040	ZNF84	ENSG00000164073	MFSD8	5	COAD,DLBC,KIRP,SKCM,THCA
ENSG00000261485	ENSG00000099326	MZF1	ENSG00000168395	ING5	5	DLBC,GBM,KIRP,SKCM,THCA
ENSG00000261485	ENSG00000198040	ZNF84	ENSG00000168395	ING5	5	DLBC,GBM,KIRP,SKCM,THCA
ENSG00000261485	ENSG00000256223	ZNF10	ENSG00000168395	ING5	5	DLBC,GBM,KIRP,SKCM,THCA
ENSG00000261485	ENSG00000135164	DMTF1	ENSG00000163660	CCNL1	5	COAD,GBM,KIRP,READ,SKCM
ENSG00000261485	ENSG00000167766	ZNF83	ENSG00000163660	CCNL1	5	COAD,GBM,KIRP,READ,SKCM
ENSG00000261485	ENSG00000198040	ZNF84	ENSG00000113593	PPWD1	5	COAD,GBM,KIRP,PCPG,THCA
ENSG00000261485	ENSG00000135164	DMTF1	ENSG00000266967	AARSD1	5	COAD,GBM,KIRP,READ,SKCM
ENSG00000261485	ENSG00000144161	ZC3H8	ENSG00000266967	AARSD1	5	COAD,GBM,KIRP,LGG,READ
ENSG00000261485	ENSG00000167766	ZNF83	ENSG00000266967	AARSD1	5	COAD,GBM,KIRP,READ,SKCM
ENSG00000261485	ENSG00000196670	ZFP62	ENSG00000266967	AARSD1	5	COAD,GBM,KIRP,LGG,SKCM
ENSG00000261485	ENSG00000198040	ZNF84	ENSG00000266967	AARSD1	5	COAD,GBM,KIRP,SKCM,THCA
ENSG00000261485	ENSG00000070476	ZXDC	ENSG00000152520	PAN3	5	COAD,GBM,KIRP,SKCM,THCA
ENSG00000261485	ENSG00000099326	MZF1	ENSG00000152520	PAN3	5	DLBC,GBM,KIRP,SKCM,THCA
ENSG00000261485	ENSG00000135164	DMTF1	ENSG00000152520	PAN3	6	COAD,GBM,KIRP,PCPG,READ,SKCM
ENSG00000261485	ENSG00000144161	ZC3H8	ENSG00000152520	PAN3	5	COAD,GBM,KIRP,LGG,READ
ENSG00000261485	ENSG00000147789	ZNF7	ENSG00000152520	PAN3	5	COAD,KIRP,PCPG,READ,SKCM
ENSG00000261485	ENSG00000166432	ZMAT1	ENSG00000152520	PAN3	5	GBM,KIRP,LAML,PCPG,THCA
ENSG00000261485	ENSG00000167766	ZNF83	ENSG00000152520	PAN3	6	COAD,DLBC,GBM,KIRP,READ,SKCM
ENSG00000261485	ENSG00000196670	ZFP62	ENSG00000152520	PAN3	6	COAD,GBM,KIRP,LAML,LGG,SKCM
ENSG00000261485	ENSG00000198040	ZNF84	ENSG00000152520	PAN3	7	COAD,DLBC,GBM,KIRP,PCPG,SKCM,THCA
ENSG00000261485	ENSG00000256223	ZNF10	ENSG00000152520	PAN3	5	DLBC,GBM,KIRP,SKCM,THCA
ENSG00000261485	ENSG00000135164	DMTF1	ENSG00000004534	RBM6	5	COAD,GBM,KIRP,READ,SKCM
ENSG00000261485	ENSG00000144161	ZC3H8	ENSG00000004534	RBM6	5	COAD,GBM,KIRP,LGG,READ
ENSG00000261485	ENSG00000167766	ZNF83	ENSG00000004534	RBM6	5	COAD,GBM,KIRP,READ,SKCM
ENSG00000261485	ENSG00000172273	HINFP	ENSG00000004534	RBM6	5	GBM,KIRP,LGG,THCA,THYM
ENSG00000261485	ENSG00000196670	ZFP62	ENSG00000004534	RBM6	5	COAD,GBM,LAML,LGG,SKCM
ENSG00000261485	ENSG00000197857	ZNF44	ENSG00000004534	RBM6	5	COAD,GBM,KIRP,READ,SKCM
ENSG00000261485	ENSG00000198040	ZNF84	ENSG00000004534	RBM6	5	COAD,GBM,KIRP,SKCM,THCA
ENSG00000261485	ENSG00000135164	DMTF1	ENSG00000102595	UGGT2	5	COAD,GBM,KIRP,READ,SKCM
ENSG00000261485	ENSG00000070476	ZXDC	ENSG00000134884	ARGLU1	5	COAD,GBM,KIRP,SKCM,THCA
ENSG00000261485	ENSG00000099326	MZF1	ENSG00000134884	ARGLU1	5	DLBC,GBM,KIRP,SKCM,THCA
ENSG00000261485	ENSG00000135164	DMTF1	ENSG00000134884	ARGLU1	6	COAD,GBM,KIRP,PCPG,READ,SKCM
ENSG00000261485	ENSG00000144161	ZC3H8	ENSG00000134884	ARGLU1	5	COAD,GBM,KIRP,LGG,READ
ENSG00000261485	ENSG00000166432	ZMAT1	ENSG00000134884	ARGLU1	5	GBM,KIRP,LAML,PCPG,THCA
ENSG00000261485	ENSG00000167766	ZNF83	ENSG00000134884	ARGLU1	6	COAD,DLBC,GBM,KIRP,READ,SKCM
ENSG00000261485	ENSG00000172273	HINFP	ENSG00000134884	ARGLU1	6	GBM,KIRP,LGG,PCPG,THCA,THYM
ENSG00000261485	ENSG00000196670	ZFP62	ENSG00000134884	ARGLU1	6	COAD,GBM,KIRP,LAML,LGG,SKCM
ENSG00000261485	ENSG00000197857	ZNF44	ENSG00000134884	ARGLU1	5	COAD,GBM,KIRP,READ,SKCM
ENSG00000261485	ENSG00000198040	ZNF84	ENSG00000134884	ARGLU1	7	COAD,DLBC,GBM,KIRP,PCPG,SKCM,THCA
ENSG00000261485	ENSG00000256223	ZNF10	ENSG00000134884	ARGLU1	5	DLBC,GBM,KIRP,SKCM,THCA
ENSG00000261485	ENSG00000198040	ZNF84	ENSG00000164118	CEP44	5	COAD,GBM,KIRP,SKCM,THCA

LncRNA-TF complex negatively regulates the gene expression by target promoter region (#cancer types with negative correlation >= 5).

lncRNA ID

TF ID

TF Name

PCgene ID

PCgene Name

Number of Cancer

Canaer Types

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lncRNAs regulate the alternative splicing event through interacting with splicing factor

LncRNA-RBP complex positively regulates the exon skippping events by target skipped eoxon region.

LncRNA Ensembl ID

RBP ID

RBP Gene Name

Exon Skipping ID

Skipped Exon

EX Gene Name

EX Affected TransID

ORF_anno

Cancer Type

LncRNA-RBP complex negatively regulates the exon skippping events by target skipped eoxon region.

LncRNA Ensembl ID

RBP ID

RBP Gene Name

Exon Skipping ID

Skipped Exon

EX Gene Name

EX Affected TransID

ORF_anno

Cancer Type

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lncRNAs regulate mRNA through targeting the 3'-UTR region

lncRNA regulates differential expressed mRNA by directly targeting 3' UTR region.

LncRNA Ensembl ID

LncRNA ENST ID

PC Gene Name

PC Gene ID

PC ENST ID

nDG

Cancer with PC gene up-regulation

Cancer with PC gene Down-regulation

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lncRNAs regulate mRNA by competing with miRNA

lncRNA regulates mRNA by competing the miRNA binding site with mRNA.

LncRNA Ensembl ID

lncRNA-miRNA-mRNA

Cancer Types

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lncRNA coding potential

ORFfinder result for the gencode.v22.lncRNA.transcript.fa.

lncRNA Ensembl ID	lncRNA ENST ID	length(AA)	start at transcript	end at transcript
ENSG00000261485.1	ENST00000563843.1	400	258	1460

	lncRNA summary
	lncRNA structure and expression level
	lncRNA-Protein interaction
	lncRNA-DNA interaction
	lncRNA-RNA interaction
	Variants in lncRNA
	lncRNAs regulate the target genes through functioning as enhancers
	lncRNAs regulate the target genes through recruiting transcript factors
	lncRNAs regulate the alternative splicing events through interacting with splicing factor
	lncRNAs regulate mRNA through targeting the 3'-UTR region
	lncRNAs regulate mRNA by competing with miRNA
	lncRNA coding potential