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Center for Computational Systems Medicine
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lncRNA summary

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lncRNA structure and expression level

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lncRNA-Protein interaction

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lncRNA-DNA interaction

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lncRNA-RNA interaction

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Variants in lncRNA

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lncRNAs regulate the target genes through functioning as enhancers

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lncRNAs regulate the target genes through recruiting transcript factors

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lncRNAs regulate the alternative splicing events through interacting with splicing factor

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lncRNAs regulate mRNA through targeting the 3'-UTR region

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lncRNAs regulate mRNA by competing with miRNA

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lncRNA coding potential

lncRNA: ENSG00000261183

Summary for SPINT1-AS1

check button Gene summary

Gene informationEnsembl ID

ENSG00000261183

Gene symbol

SPINT1-AS1

Gene nameSPINT1 antisense RNA 1
HGNC

53162

Entrez ID

102724362

Gene typeantisense
Synonyms15q15.1|RP11-532F12.5|SPINT1-AS1
UniProtAcc

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Structure and expression level for SPINT1-AS1

check buttonAS events and RNA A-to-I editing events of lncRNA in TCGA based on Genvode V22 structure.
UCSC result

check buttonDifferentially expressed gene analysis between cancer and normal samples.
DEG result
Ensembl IDBase meanlog2FC(AD/control)lfcSEStatP-valueAdjc.p-valueDEG direction Cancer type
ENSG000002611833.180378e+024.112629e+003.529029e-011.165371e+012.200000e-315.380000e-29UPCHOL
ENSG000002611833.309220e+02-1.278791e+001.358944e-01-9.410176e+004.950000e-213.160000e-20DOWNKIRC
ENSG000002611837.608542e+021.868770e+005.163529e-013.619171e+002.955480e-042.966028e-03UPCESC
ENSG000002611834.639727e+021.481831e+001.696534e-018.734458e+002.450000e-183.480000e-17UPUCEC
ENSG000002611835.168813e+011.218644e+003.554602e-013.428356e+006.072480e-041.468924e-03UPLIHC

check buttonCorrelation between lncRNAs and cancer stages.
LncRNA Ensembl IDCorrelationP-valueCancer TypeAdjc.p-value
ENSG000002611834.986726e-014.893863e-04CHOL9.773355e-04
ENSG00000261183-3.117954e-013.565444e-15KIRC1.513632e-14
ENSG00000261183-4.415040e-012.321130e-15KIRP8.863816e-14

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lncRNA-Protein interaction for SPINT1-AS1

lncrna_protein
check buttonlncRNA-epigenetic factor interaction (#cancer types with positive correlation >= 5).
Epi result
LncRNA Ensembl IDLncRNA ENST IDLncRNA NameProtein Ensembl IDProtein NameCatRAPID ScoreLncpro ScoreUniPortIDGene SubtypePublic source
ENSG00000261183ENST00000564302RP11-532F12.5ENSG00000280789PAGR111.1791.1527Q9BTK6EpiNA
ENSG00000261183ENST00000564302RP11-532F12.5ENSG00000171148TADA30.6990.1233O75528EpiNA

check buttonlncRNA-transcript factor interaction (#cancer types with positive correlation >= 5).
TF result
LncRNA Ensembl IDLncRNA ENST IDLncRNA NameProtein Ensembl IDProtein NameCatRAPID ScoreLncpro ScoreUniPortIDGene SubtypePublic source
ENSG00000261183ENST00000564302RP11-532F12.5ENSG00000180035ZNF4814.3490.6008Q96MX3TFNA

check buttonlncRNA-RNA binding protein interaction (#cancer types with positive correlation >= 5).
RBP result
LncRNA Ensembl IDLncRNA ENST IDLncRNA NameProtein Ensembl IDProtein NameCatRAPID ScoreLncpro ScoreUniPortIDGene SubtypePublic source
ENSG00000261183ENST00000564302RP11-532F12.5ENSG00000150316CWC1516.6490.1572Q9P013RBPNA

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lncRNA-DNA interaction for SPINT1-AS1

lncrna_DNA
check buttonlncRNA targets the enhancer region and positively regulates the gene expression.

check buttonlncRNA targets the promoter region and positively regulates the gene expression.

check buttonlncRNA targets the promoter region and negatively regulates the gene expression.

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lncRNA-RNA interaction for SPINT1-AS1

lncrna_RNA
check buttonlncRNA targets the 3'UTR region and negatively regulates the mRNA.
Only predicted by lncTar
STK10,EVI5,ARID1A,DYSF,SENP7,ESYT2,ATM,RFC1,RDX,WWC3,SMARCC2,ECM2,KLHL18,GNL3L,ATXN7L1,NXPE3,KIAA1109,STRN3,MEF2C,KAT6B,TTYH3,EDEM1,KANK2,NEDD1,SMG1,STX2,ANKRD28,HEATR6,PITPNM2,VPS13B,PSMC1,SRP72,ZFYVE26,LDLRAD4,DST,MAN1A2,PCYOX1,CELF2,MLLT10,FAM98A,PRRC2C,RAB8B,MIER1,FCGR2A,PHF3,CEP120,PAK2,ZEB2,NOL8,ARID1B,STRN,CALD1,SLFN5,ARHGAP17,GOLIM4,RPRD1B,COPA,GPR176,KIDINS220,CYLD,ZHX3,MRAS,CLIP3,CLASP2,APPBP2,SEC23A,ZCCHC24,MKLN1,MMP14,RNF216,ITSN2,RNF38,RB1CC1,ARSK,RBMS3,IFFO1,CSF2RB,MYCBP2,SNRNP200,FBXW8,TANGO6,MDC1,BBS7,UBE4B,NDST1,BRPF3,TAB2,BRMS1L,YAP1,DARS1,CRLF3,MYLK,SAMD8,FOXN3,SEC63,MSH6,HOMER1,OSBPL8,NCOA4,ANXA6,MICAL2,KDM2A,ACTR2,TRAM2,ABL2,GTF2I,NEK1,NUP58,NPAT,CNOT6L,HBP1,IPO9,GID4,SETX,NIN,SSH2,TMED8,GON4L,PRKAR1A,MIS18BP1,CALU,YME1L1,KCTD20,DCAF5,EDNRA,REV3L,SPTBN1,RABEP1,SH3PXD2B,FAM13B,MED23,RNF144A,ITCH,FNDC3B,ATF1,ARCN1,LATS1,HERC1,CEP135,CD302,FN1,NOMO2,MYD88,CUL3,RAPGEF1,LEO1,LRP6,TRAF6,PARP1,CLIP4,FAM168B,PHF6,DHTKD1,ST3GAL2,SLC36A1,ATG2B,ADCY7,UHRF1BP1L,DOCK2,TRAPPC11,KLHL28,REV1,FRS2,FCHSD2,DOCK4,MBNL1,EHBP1,JAZF1,EHD2,RC3H1,PLEKHO2,ACTN1,GNG2,RNF214,STARD13,SPTY2D1,TSPAN18,TUT4,PPAT,FOXK1,GPATCH2L,FILIP1L,TASOR,P2RX7,FNDC3A,CHORDC1,HELZ,PLXND1,SEC24B,FOXN2,ZFP1,SEC24A,ACAP2,ZDHHC20,KMT2D,OPN1SW,PKD2,MON2,PRRC2A,USP25,DIXDC1,IFNAR2,PPIP5K2,RRP15,MOB1B,USP32,C1S,AGO3,G3BP1,NCBP1,RASSF8,USP34,PIP4K2A,FERMT2,ANKIB1,DNMT1,POLR1A,PRMT5,GALNT2,AP3B1,PDGFRB,ADCY9,AFF4,DDX3X,DGKD,PXDN,ASXL2,MAP3K20,SLC23A2,USP47,ESF1,UTRN,CCDC71L,CEP350,PIKFYVE,R3HDM1,RAB3GAP2,CLCN6,ZCCHC2,HSPG2,MTDH,ASH1L,RFTN1,MAP3K3,ATP2B4,PLCG1,CFL2,C16orf70,LHFPL2,RAP1B,WDR7,EP400,ITGA5,XRN1,SMG6,EPG5,INVS,AASS,PHF12,B3GALNT2,SKI,NUP98,CFH,KIAA0586,DNAJC24,TRIM23,ZCCHC14,PCDH18,CRISPLD2,PLBD2,TRIP12,AKT3,FZD4,GTF2A1,CHD9,NPC1,HMGXB4,CEP68,MYO18A,MORC3,COL12A1,FBXL7,GLT8D2,CSNK1A1,ZEB1,TUBGCP3,SETD7,TTC37,MRC2,SUFU,UGGT1,C1R,VRK2,MYADM,CHD6,UTP25,F2R,ELK4,TAF3,XPOT,CELF1,CAP2,TMX3,CCNK,TWSG1,CTDSP2,RPS6KB1,SDAD1,SCAF11,FKBP7,NF1,SYNGAP1,PRRG1,ITSN1,OLFML1,CHST11,SLC11A2,USP15,FCF1,EIF4G3,SH3PXD2A,NEDD4,NREP,SEPTIN10,PCDHGC3,NOP9,TAOK3,IL1R1,MSRB3,TSR1,MEF2D,SLC4A7,PRDM2,IARS1,KIRREL1,UBE4A,DCUN1D1,MAP3K2,FAT1,ERBIN,PHACTR2,CAP1,ITPRIPL2,FHL1,SMC4,ZC3H11A,KATNAL1,MACF1,ATP10D,RIC1,FYB1,KTN1,RAPGEF2,C5orf24,SUPT16H,ATP8B2,ILK,ALG9,HAUS6,CPED1,RRN3,HEG1,PJA2,CD84,SEC24D,GLI3,DOCK7,NEK9,SEPTIN11,ARHGEF6,CLIP1,ARNT,CORO1C,MAF,GARRE1,RAB2B,OLFML2B,ATF2,NCOA2,RC3H2,DNAJC18,CCSER2,ROCK1,MAPK1,RNF169,C12orf4,TGFBR3,UBR5,FAM168A,MXRA5,TBC1D2B,RAI14,LRP12,SSR1,LARP4,USP9X,ROCK2,CCDC88A,NADK2,RHBDD1,DESI2,CEP97,PLXNC1,ADAM19,INHBA,DDR2,WNK1,FAM126A,SSH1,SREK1,ERG,FKBP15,GAS7,PFAS,SLC16A2,KLHL5,EPS15,HIP1,SMCHD1,MAP4K4,OSBPL9,SERINC1,FNBP1,ASAP1,LRRC8C,NID2,ANTXR2,NFAT5,KIF2A,PPIG,REST,COLEC12,EMSY,C21orf91,BACE1,POLK,TGFBI,RANBP2,CEP290,DCAF17,IL6ST,AFF1,ABCE1,OSMR,VCAN,AGO2,PTPN1,FAM114A2,TECPR2,UTP23,STK4,ERCC4,HECTD4,IPO7,CPSF2,CKAP5,SMC6,FAM172A,INPP4A,FADS1,PHLDB2,DHX36,SELENOI,PTPN14,BAZ1A,SRGAP2,PALLD,CEP295,TIMP2,NRDC,NAV1,GNB4,TNS3,TUBA1B,QKI,BOD1L1,RRP1B,PECAM1,CEP170,OXSR1,LIMS1,ELOVL5,CDKL5,SNX6,SPIRE1,LATS2,NUP50,TRIM37,PTPN11,WDR36,SCYL2,ADGRL2,ANKFY1,A2M,NR2C2,GPX8,CLTC,ATRN,CREBRF,FRMD6,KRIT1,ATP2A2,DIAPH2,PIK3C3,ANKRD50,TOR1AIP1,RAB31,M6PR,APAF1,TAF1,PCNX1,TPP1,UBR4,DDI2,CDH11,VIRMA,TGFBR1,SLF2,TTBK2,SMARCA2,SDCBP,UBR2,MAN2A1,KLF7,STARD8,SOAT1,GJC1,EML1,NCKAP1L,GTDC1,BCLAF1,ARHGAP5,MPDZ,CARD8,SAMD4A,SEC14L1,SF3B1,ESYT1,COL6A3,ARSB,MTMR9,TEAD1,ADGRA2,MIDEAS,ZNF106,RASA1,ARHGEF10,RSU1,ADAMTS12,UBXN4,SENP6,SWAP70,MED13L,TMEM64,PHC3,WIPF1,ANKRD12,OPA1,SIK3,KSR1,TAF1B,TMEM39A,NCOA3,SYNJ1,TBC1D23,SBF2,GTF3C4,GOLGA4,SSPN,ABCA1,ERC1,TNPO1,SPAG9,ACLY,PGM3,HPS5,NEK7,ADAMTS2,FAM160B1,CDH5,RO60,CYB5R4,HEATR5B,BIRC6,DPYSL3,SEC31A,DENND5B,NEK6,ARL2BP,LRP1,ARL5A,ATRX,LTBP2,DENND5A,BDP1,NLGN2,SCAF4,SLC30A7,CALCOCO2,CMKLR1,WWC2,AFAP1,AHNAK,MCFD2
Exist in public source
NA

check buttonlncRNA targets the skipped exon region.
-lncRNA and exonskipping events are positively correlated.
lncRNA and exonskipping events positive correlated
LncRNA Ensembl IDLncRNA ENST IDExon IDSkipped ExondGndGGene name with skipped exonTransID with skipped exonORF mutation
ENSG00000261183ENST00000563217exon_skip_11259chr1:155061414-155061489-15.30-0.2217ADAM15ENST00000356955In-frame
ENSG00000261183ENST00000563217exon_skip_11286chr1:155061903-155061975-11.26-0.4331ADAM15ENST00000356955In-frame
ENSG00000261183ENST00000563217exon_skip_37475chr1:225504990-225505053-11.25-0.1815ENAHENST00000366844In-frame
ENSG00000261183ENST00000568525exon_skip_44853chr10:104010815-104010908-12.31-0.1784SLKENST00000369755In-frame
ENSG00000261183ENST00000563217exon_skip_44998chr10:110132304-110132400-8.48-0.1390ADD3ENST00000356080In-frame
ENSG00000261183ENST00000563217exon_skip_45125chr10:112964555-112964624-6.92-0.1098TCF7L2ENST00000355995In-frame
ENSG00000261183ENST00000563217exon_skip_48713chr10:34336198-34336243-6.61-0.1537PARD3ENST00000374789In-frame
ENSG00000261183ENST00000563217exon_skip_59476chr11:57815914-57816001-10.78-0.1827CTNND1ENST00000399050In-frame
ENSG00000261183ENST00000563217exon_skip_60345chr11:63903985-63904147-13.07-0.1233MARK2ENST00000402010In-frame
ENSG00000261183ENST00000563217exon_skip_64939chr11:112230207-112230230-3.66-0.2033PTSENST00000280362Frame-shift
ENSG00000261183ENST00000563217exon_skip_114200chr14:73279280-73279424-14.20-0.1203NUMBENST00000355058,ENST00000555238In-frame
ENSG00000261183ENST00000563217exon_skip_287890chr17:29116443-29116455-4.62-0.7700MYO18AENST00000527372In-frame
ENSG00000261183ENST00000563217exon_skip_296984chr18:58335477-58335537-9.17-0.1951NEDD4LENST00000400345In-frame
ENSG00000261183ENST00000563217exon_skip_378912chr3:152446703-152446757-5.92-0.2819MBNL1ENST00000282486,ENST00000463374In-frame
ENSG00000261183ENST00000563217exon_skip_384879chr3:52554723-52554879-15.79-0.1628PBRM1ENST00000296302In-frame
ENSG00000261183ENST00000563217exon_skip_386291chr3:108050577-108050602-4.80-0.2400CD47ENST00000361309Frame-shift
ENSG00000261183ENST00000563217exon_skip_423795chr4:55888887-55888932-4.87-0.4058EXOC1ENST00000346134,ENST00000381295In-frame
ENSG00000261183ENST00000568525exon_skip_430601chr4:82842139-82842481-32.17-0.1058SEC31AENST00000355196,ENST00000395310,ENST00000448323In-frame
ENSG00000261183ENST00000568419exon_skip_435063chr5:66075023-66075230-20.76-0.1314ERBINENST00000284037In-frame
ENSG00000261183ENST00000563217exon_skip_456460chr6:17771113-17771218-13.50-0.1467KIF13AENST00000259711In-frame
ENSG00000261183ENST00000563217exon_skip_461111chr6:90544551-90544632-9.91-0.1376MAP3K7ENST00000369329In-frame
ENSG00000261183ENST00000563217exon_skip_499771chr9:128592982-128593042-8.77-0.2506SPTAN1ENST00000372731In-frame
ENSG00000261183ENST00000563217exon_skip_64604chr11:102209516-102209564-5.53-0.1257YAP1ENST00000282441In-frame
ENSG00000261183ENST00000563217exon_skip_67074chr11:406842-406993-14.98-0.1498SIGIRRENST00000332725,ENST00000397632,ENST00000431843Frame-shift
ENSG00000261183ENST00000563217exon_skip_489002chr8:28846746-28846809-11.60-0.1933INTS9ENST00000521022In-frame
ENSG00000261183ENST00000563217exon_skip_302276chr19:10808568-10808580-4.57-0.4570DNM2ENST00000355667In-frame
ENSG00000261183ENST00000563217exon_skip_375623chr3:58141857-58141929-9.10-0.1517FLNBENST00000295956In-frame
ENSG00000261183ENST00000568525exon_skip_482403chr8:27445793-27445919-15.39-0.1710PTK2BENST00000346049,ENST00000397501In-frame
ENSG00000261183ENST00000563217exon_skip_434332chr5:34813573-34813660-8.10-0.1761RAI14ENST00000265109,ENST00000428746,ENST00000503673In-frame
ENSG00000261183ENST00000568525exon_skip_105078chr14:21087319-21087463-22.70-0.1908ARHGEF40ENST00000298694In-frame

-lncRNA and exonskipping events are negatively correlated.
lncRNA and exonskipping events negative correlated
LncRNA Ensembl IDLncRNA ENST IDExon IDSkipped ExondGndGGene name with skipped exonTransID with skipped exonLOF
ENSG00000261183ENST00000563217exon_skip_1717chr1:15721328-15721388-6.64-0.2554PLEKHM2ENST00000375799In-frame
ENSG00000261183ENST00000563217exon_skip_21610chr1:9737497-9737554-5.95-0.1352CLSTN1ENST00000377298In-frame
ENSG00000261183ENST00000563217exon_skip_21628chr1:9756480-9756510-6.91-0.4319CLSTN1ENST00000377298In-frame
ENSG00000261183ENST00000563217exon_skip_30360chr1:150842423-150842468-9.52-0.2505ARNTENST00000358595In-frame
ENSG00000261183ENST00000563217exon_skip_33516chr1:156938417-156938513-11.64-0.2839ARHGEF11ENST00000361409In-frame
ENSG00000261183ENST00000563217exon_skip_43507chr10:84499874-84499959-12.96-0.1751CCSER2ENST00000224756Frame-shift
ENSG00000261183ENST00000563217exon_skip_52231chr10:93392916-93392955-5.40-0.2077MYOFENST00000359263In-frame
ENSG00000261183ENST00000563217exon_skip_59233chr11:47288967-47289027-7.43-0.1516MADDENST00000311027In-frame
ENSG00000261183ENST00000563217exon_skip_71438chr11:60941121-60941290-10.70-0.1103SLC15A3ENST00000227880Frame-shift
ENSG00000261183ENST00000568525exon_skip_90104chr12:10709907-10710114-26.84-0.1588YBX3ENST00000228251In-frame
ENSG00000261183ENST00000563217exon_skip_96112chr12:109945259-109945349-8.91-0.1188GIT2ENST00000355312In-frame
ENSG00000261183ENST00000563217exon_skip_97739chr12:121244572-121244615-7.61-0.2718CAMKK2ENST00000324774,ENST00000402834,ENST00000404169Frame-shift
ENSG00000261183ENST00000563217exon_skip_104174chr13:79353152-79353224-8.33-0.2687RBM26ENST00000438737In-frame
ENSG00000261183ENST00000563217exon_skip_124604chr15:85658536-85658590-5.58-0.1468AKAP13ENST00000394518In-frame
ENSG00000261183ENST00000563217exon_skip_287874chr17:29085603-29085648-3.49-0.1293MYO18AENST00000527372In-frame
ENSG00000261183ENST00000563217exon_skip_337919chr2:27445744-27445843-8.79-0.1395IFT172ENST00000260570In-frame
ENSG00000261183ENST00000563217exon_skip_357772chr20:47659398-47659452-6.76-0.6760SULF2ENST00000359930,ENST00000484875In-frame
ENSG00000261183ENST00000563217exon_skip_361434chr21:25997359-25997416-7.66-0.2553APPENST00000346798In-frame
ENSG00000261183ENST00000563217exon_skip_368285chr22:29329711-29329720-2.40-1.2000AP1B1ENST00000357586,ENST00000405198In-frame
ENSG00000261183ENST00000563217exon_skip_376144chr3:100311832-100311877-6.34-0.1714TBC1D23ENST00000394144In-frame
ENSG00000261183ENST00000563217exon_skip_382356chr3:37091466-37091538-8.07-0.1281LRRFIP2ENST00000336686In-frame
ENSG00000261183ENST00000563217exon_skip_436488chr5:96726793-96726859-8.34-0.2195CASTENST00000341926,ENST00000395813In-frame
ENSG00000261183ENST00000563217exon_skip_451515chr6:41080810-41080897-10.92-0.1655NFYAENST00000341376In-frame
ENSG00000261183ENST00000563217exon_skip_470719chr7:117134123-117134192-5.62-0.1479ST7ENST00000265437In-frame
ENSG00000261183ENST00000563217exon_skip_508298chr9:136445051-136445111-6.47-0.1470SEC16AENST00000313050In-frame
ENSG00000261183ENST00000563217exon_skip_514511chrX:41555599-41555635-6.73-0.2804CASKENST00000378163In-frame
ENSG00000261183ENST00000563217exon_skip_515330chrX:65524563-65524614-7.15-0.1744LAS1LENST00000374811In-frame
ENSG00000261183ENST00000563217exon_skip_353395chr20:62130218-62130296-10.15-0.2207LSM14BENST00000279068In-frame
ENSG00000261183ENST00000563217exon_skip_445633chr5:151110626-151110644-5.05-0.4208ANXA6ENST00000354546In-frame
ENSG00000261183ENST00000568525exon_skip_462570chr6:136383670-136383781-13.29-0.1242MAP7ENST00000354570In-frame
ENSG00000261183ENST00000563217exon_skip_494822chr9:2651414-2651498-7.60-0.2303VLDLRENST00000382100In-frame
ENSG00000261183ENST00000563217exon_skip_48296chr10:26755654-26755741-12.94-0.2022ABI1ENST00000376142In-frame
ENSG00000261183ENST00000568419exon_skip_80777chr12:26960514-26960628-11.16-0.1116FGFR1OP2ENST00000229395In-frame
ENSG00000261183ENST00000563217exon_skip_437024chr5:123595038-123595134-15.90-0.2565CSNK1G3ENST00000361991In-frame

check buttonlncRNA targets by miRNA.
LncRNA Ensembl IDmiRNA IDLncRNA ENST IDBinding site in lncRNAScoreEnergyAlign LenPublic source

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Variants for SPINT1-AS1

check buttonRNA A-to-I editing events in lncRNA.
LncRNAediting IDLncRNA Ensembl IDChromosomeEditing PositionStrandGene TypeGene NameTranscript IDTranscript TypeTranscript Name

check buttonEdited-associated DElncRNAs in cancer.
LncRNA Ensembl IDLncRNA IndexCancer TypeChr_Postion_StrandAVE1AVE2log2FCW-valueP-valueAdjc.p-valueChange

check buttonCorrelation between RNA A-to-I editing events's frequecy and lncRNA expression.
LncRNA Ensembl IDLncRNA IndexCorrelationP-valueAdjc.p-value

check buttonCis-expression quantitative trait loci(cis-eQTL) of lncRNA.
LncRNA Ensembl IDLncRNA NameSNP infoNumber of Positive corelated CancerPositive corelated CancerNumber of Negative corelated CancerNegative corelated Cancer

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lncRNAs regulate the target genes through functioning as enhancers

lncrna_enhancer
check buttonlncRNA regulates differentially expressed genes by function as enhancer.
LncRNA Ensembl IDPC Gene IDPC Gene NamePositive correlated cancersCancer with PC gene up-regulationCancer with PC gene down-regulation

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lncRNAs regulate the target genes through recruiting transcript factors

lncrna_TF
check buttonLncRNA-TF complex positively regulates the gene expression by target promoter region (#cancer types with positive correlation >= 5).
lncRNA IDTF IDTF NamePCgene IDPCgene NameNumber of CancerCanaer Types

check buttonLncRNA-TF complex negatively regulates the gene expression by target promoter region (#cancer types with negative correlation >= 5).
lncRNA IDTF IDTF NamePCgene IDPCgene NameNumber of CancerCanaer Types

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lncRNAs regulate the alternative splicing event through interacting with splicing factor

lncrna_AS
check buttonLncRNA-RBP complex positively regulates the exon skippping events by target skipped eoxon region.
LncRNA Ensembl IDRBP IDRBP Gene NameExon Skipping IDSkipped ExonEX Gene NameEX Affected TransIDORF_annoCancer Type

check buttonLncRNA-RBP complex negatively regulates the exon skippping events by target skipped eoxon region.
LncRNA Ensembl IDRBP IDRBP Gene NameExon Skipping IDSkipped ExonEX Gene NameEX Affected TransIDORF_annoCancer Type

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lncRNAs regulate mRNA through targeting the 3'-UTR region

lncrna_mRNA
check buttonlncRNA regulates differential expressed mRNA by directly targeting 3' UTR region.
LncRNA Ensembl IDLncRNA ENST IDPC Gene NamePC Gene IDPC ENST IDdGnDGCancer with PC gene up-regulationCancer with PC gene Down-regulation
ENSG00000261183ENST00000565315SAMD4AENSG00000020577ENST00000554335-0.109085-CHOL,CESC,UCEC
ENSG00000261183ENST00000565315SAMD4AENSG00000020577ENST00000555192-0.109085-CHOL,CESC,UCEC
ENSG00000261183ENST00000565315EHD2ENSG00000024422ENST00000263277-0.10441KIRCUCEC
ENSG00000261183ENST00000564302SAMD4AENSG00000020577ENST00000554335-0.137237-CHOL,CESC,UCEC
ENSG00000261183ENST00000564302SAMD4AENSG00000020577ENST00000555192-0.137237-CHOL,CESC,UCEC
ENSG00000261183ENST00000564302EHD2ENSG00000024422ENST00000596225-0.103698KIRCUCEC
ENSG00000261183ENST00000568419ARHGAP31ENSG00000031081ENST00000264245-0.11071-CESC,UCEC
ENSG00000261183ENST00000568525SAMD4AENSG00000020577ENST00000554335-0.103577-CHOL,CESC,UCEC
ENSG00000261183ENST00000568525SAMD4AENSG00000020577ENST00000555192-0.103577-CHOL,CESC,UCEC
ENSG00000261183ENST00000568525EHD2ENSG00000024422ENST00000596225-0.10151KIRCUCEC
ENSG00000261183ENST00000563217EHD2ENSG00000024422ENST00000596225-0.11301KIRCUCEC
ENSG00000261183ENST00000565315CFL2ENSG00000165410ENST00000555765-0.5813343-CHOL,CESC,UCEC,LIHC
ENSG00000261183ENST00000565315CFL2ENSG00000165410ENST00000556161-0.3825502-CHOL,CESC,UCEC,LIHC
ENSG00000261183ENST00000565315ZCCHC24ENSG00000165424ENST00000372333-0.161250-CHOL,CESC,UCEC,LIHC
ENSG00000261183ENST00000565315CHST11ENSG00000171310ENST00000546689-0.20961KIRC-
ENSG00000261183ENST00000565315MYADMENSG00000179820ENST00000391768-0.12771-CESC,UCEC
ENSG00000261183ENST00000564302CFL2ENSG00000165410ENST00000555765-0.5813542-CHOL,CESC,UCEC,LIHC
ENSG00000261183ENST00000564302CFL2ENSG00000165410ENST00000556161-0.7500214-CHOL,CESC,UCEC,LIHC
ENSG00000261183ENST00000564302ZCCHC24ENSG00000165424ENST00000372333-0.1922105-CHOL,CESC,UCEC,LIHC
ENSG00000261183ENST00000564302RAB31ENSG00000168461ENST00000581109-0.108681-UCEC
ENSG00000261183ENST00000564302CHST11ENSG00000171310ENST00000546689-0.147210KIRC-
ENSG00000261183ENST00000564302MYADMENSG00000179820ENST00000391768-0.127750-CESC,UCEC
ENSG00000261183ENST00000568419CFL2ENSG00000165410ENST00000555765-0.5813532-CHOL,CESC,UCEC,LIHC
ENSG00000261183ENST00000568419CFL2ENSG00000165410ENST00000556161-0.7500111-CHOL,CESC,UCEC,LIHC
ENSG00000261183ENST00000568419ZCCHC24ENSG00000165424ENST00000372333-0.19222-CHOL,CESC,UCEC,LIHC
ENSG00000261183ENST00000568419RAB31ENSG00000168461ENST00000581109-0.1294222-UCEC
ENSG00000261183ENST00000568419CHST11ENSG00000171310ENST00000546689-0.1049224KIRC-
ENSG00000261183ENST00000568419MYADMENSG00000179820ENST00000391768-0.1226166-CESC,UCEC
ENSG00000261183ENST00000568525CFL2ENSG00000165410ENST00000555765-0.3914366-CHOL,CESC,UCEC,LIHC
ENSG00000261183ENST00000568525CFL2ENSG00000165410ENST00000556161-0.5420413-CHOL,CESC,UCEC,LIHC
ENSG00000261183ENST00000568525ZCCHC24ENSG00000165424ENST00000372336-0.15661-CHOL,CESC,UCEC,LIHC
ENSG00000261183ENST00000568525ZCCHC24ENSG00000165424ENST00000372333-0.192218-CHOL,CESC,UCEC,LIHC
ENSG00000261183ENST00000568525AXLENSG00000167601ENST00000593513-0.10781KIRCUCEC,LIHC
ENSG00000261183ENST00000568525RAB31ENSG00000168461ENST00000581109-0.10861-UCEC
ENSG00000261183ENST00000568525MYADMENSG00000179820ENST00000391768-0.113696-CESC,UCEC
ENSG00000261183ENST00000568525GJC1ENSG00000182963ENST00000586347-0.14041KIRCCESC,UCEC
ENSG00000261183ENST00000568525GJC1ENSG00000182963ENST00000592524-0.13651KIRCCESC,UCEC
ENSG00000261183ENST00000563217CFL2ENSG00000165410ENST00000555765-0.3271218-CHOL,CESC,UCEC,LIHC
ENSG00000261183ENST00000563217CFL2ENSG00000165410ENST00000556161-0.7500119-CHOL,CESC,UCEC,LIHC
ENSG00000261183ENST00000563217ZCCHC24ENSG00000165424ENST00000372333-0.1668145-CHOL,CESC,UCEC,LIHC
ENSG00000261183ENST00000563217GPR176ENSG00000166073ENST00000543580-0.10201KIRCUCEC
ENSG00000261183ENST00000563217GPR176ENSG00000166073ENST00000299092-0.10201KIRCUCEC
ENSG00000261183ENST00000563217AXLENSG00000167601ENST00000301178-0.11361KIRCUCEC,LIHC
ENSG00000261183ENST00000563217RAB31ENSG00000168461ENST00000578734-0.1091106-UCEC
ENSG00000261183ENST00000563217HEG1ENSG00000173706ENST00000311127-0.10071-UCEC
ENSG00000261183ENST00000563217HEG1ENSG00000173706ENST00000487661-0.10071-UCEC
ENSG00000261183ENST00000563217C1SENSG00000182326ENST00000360817-0.1142131KIRCCHOL,UCEC,LIHC
ENSG00000261183ENST00000565315MAP3K3ENSG00000198909ENST00000584573-0.188792-CESC,UCEC
ENSG00000261183ENST00000565315MAP3K3ENSG00000198909ENST00000577395-0.266460-CESC,UCEC
ENSG00000261183ENST00000565315PCDHGC3ENSG00000240184ENST00000611950-0.242446KIRCUCEC
ENSG00000261183ENST00000565315PCDHGC3ENSG00000240184ENST00000617222-0.2565121KIRCUCEC
ENSG00000261183ENST00000564302MAP3K3ENSG00000198909ENST00000579585-0.10331-CESC,UCEC
ENSG00000261183ENST00000564302MAP3K3ENSG00000198909ENST00000584573-0.190329-CESC,UCEC
ENSG00000261183ENST00000564302MAP3K3ENSG00000198909ENST00000361733-0.10331-CESC,UCEC
ENSG00000261183ENST00000564302MAP3K3ENSG00000198909ENST00000361357-0.10331-CESC,UCEC
ENSG00000261183ENST00000564302MAP3K3ENSG00000198909ENST00000577395-0.26491-CESC,UCEC
ENSG00000261183ENST00000564302MAP3K3ENSG00000198909ENST00000581732-0.111227-CESC,UCEC
ENSG00000261183ENST00000564302PCDHGC3ENSG00000240184ENST00000611950-0.2424101KIRCUCEC
ENSG00000261183ENST00000564302PCDHGC3ENSG00000240184ENST00000617222-0.2800171KIRCUCEC
ENSG00000261183ENST00000564302CFHENSG00000000971ENST00000367429-0.26121-CHOL
ENSG00000261183ENST00000564302CFHENSG00000000971ENST00000630130-0.12641-CHOL
ENSG00000261183ENST00000564302CFHENSG00000000971ENST00000359637-0.11931-CHOL
ENSG00000261183ENST00000568419MAP3K3ENSG00000198909ENST00000579585-0.13931-CESC,UCEC
ENSG00000261183ENST00000568419MAP3K3ENSG00000198909ENST00000584573-0.1961214-CESC,UCEC
ENSG00000261183ENST00000568419MAP3K3ENSG00000198909ENST00000361733-0.13931-CESC,UCEC
ENSG00000261183ENST00000568419MAP3K3ENSG00000198909ENST00000361357-0.13931-CESC,UCEC
ENSG00000261183ENST00000568419MAP3K3ENSG00000198909ENST00000577395-0.2181227-CESC,UCEC
ENSG00000261183ENST00000568419PCDHGC3ENSG00000240184ENST00000611950-0.24241KIRCUCEC
ENSG00000261183ENST00000568419PCDHGC3ENSG00000240184ENST00000617222-0.3073247KIRCUCEC
ENSG00000261183ENST00000568419CFHENSG00000000971ENST00000367429-0.14781-CHOL
ENSG00000261183ENST00000568525MAP3K3ENSG00000198909ENST00000579585-0.12471-CESC,UCEC
ENSG00000261183ENST00000568525MAP3K3ENSG00000198909ENST00000584573-0.1802230-CESC,UCEC
ENSG00000261183ENST00000568525MAP3K3ENSG00000198909ENST00000361733-0.12471-CESC,UCEC
ENSG00000261183ENST00000568525MAP3K3ENSG00000198909ENST00000361357-0.12471-CESC,UCEC
ENSG00000261183ENST00000568525MAP3K3ENSG00000198909ENST00000577395-0.266428-CESC,UCEC
ENSG00000261183ENST00000568525PCDHGC3ENSG00000240184ENST00000611950-0.242414KIRCUCEC
ENSG00000261183ENST00000568525PCDHGC3ENSG00000240184ENST00000617222-0.2365257KIRCUCEC
ENSG00000261183ENST00000563217MAP3K3ENSG00000198909ENST00000579585-0.12211-CESC,UCEC
ENSG00000261183ENST00000563217MAP3K3ENSG00000198909ENST00000584573-0.166383-CESC,UCEC
ENSG00000261183ENST00000563217MAP3K3ENSG00000198909ENST00000361733-0.12211-CESC,UCEC
ENSG00000261183ENST00000563217MAP3K3ENSG00000198909ENST00000361357-0.12211-CESC,UCEC
ENSG00000261183ENST00000563217MAP3K3ENSG00000198909ENST00000577395-0.1786169-CESC,UCEC
ENSG00000261183ENST00000563217MAP3K3ENSG00000198909ENST00000577597-0.11291-CESC,UCEC
ENSG00000261183ENST00000563217PJA2ENSG00000198961ENST00000361189-0.14741-CESC,UCEC
ENSG00000261183ENST00000563217PJA2ENSG00000198961ENST00000361557-0.14741-CESC,UCEC
ENSG00000261183ENST00000563217PCDHGC3ENSG00000240184ENST00000611950-0.1199115KIRCUCEC
ENSG00000261183ENST00000563217PCDHGC3ENSG00000240184ENST00000617641-0.12021KIRCUCEC
ENSG00000261183ENST00000563217PCDHGC3ENSG00000240184ENST00000617222-0.1676167KIRCUCEC
ENSG00000261183ENST00000563217PCDHGC3ENSG00000240184ENST00000308177-0.12021KIRCUCEC
ENSG00000261183ENST00000563217PLEKHO2ENSG00000241839ENST00000616065-0.10901KIRCCESC
ENSG00000261183ENST00000563217PLEKHO2ENSG00000241839ENST00000323544-0.10901KIRCCESC
ENSG00000261183ENST00000565315EML1ENSG00000066629ENST00000327921-0.14711-UCEC
ENSG00000261183ENST00000565315EML1ENSG00000066629ENST00000555096-0.121416-UCEC
ENSG00000261183ENST00000564302EML1ENSG00000066629ENST00000327921-0.147152-UCEC
ENSG00000261183ENST00000564302EML1ENSG00000066629ENST00000555096-0.121471-UCEC
ENSG00000261183ENST00000564302EML1ENSG00000066629ENST00000557313-0.109277-UCEC
ENSG00000261183ENST00000568419TIMP2ENSG00000035862ENST00000592761-0.13911-CESC,UCEC
ENSG00000261183ENST00000568419EML1ENSG00000066629ENST00000327921-0.1294207-UCEC
ENSG00000261183ENST00000568419EML1ENSG00000066629ENST00000555096-0.1065474-UCEC
ENSG00000261183ENST00000568419EML1ENSG00000066629ENST00000557313-0.10371-UCEC
ENSG00000261183ENST00000568525TIMP2ENSG00000035862ENST00000592761-0.10781-CESC,UCEC
ENSG00000261183ENST00000568525EML1ENSG00000066629ENST00000327921-0.16601-UCEC
ENSG00000261183ENST00000568525EML1ENSG00000066629ENST00000262233-0.16601-UCEC
ENSG00000261183ENST00000568525EML1ENSG00000066629ENST00000334192-0.16601-UCEC
ENSG00000261183ENST00000563217TIMP2ENSG00000035862ENST00000592761-0.10201-CESC,UCEC
ENSG00000261183ENST00000565315PKD2ENSG00000118762ENST00000502363-0.686757-CESC,UCEC
ENSG00000261183ENST00000565315CALD1ENSG00000122786ENST00000417172-0.297977-CHOL,CESC,UCEC
ENSG00000261183ENST00000565315ROCK2ENSG00000134318ENST00000401753-0.113630-CESC,UCEC
ENSG00000261183ENST00000564302PKD2ENSG00000118762ENST00000502363-0.6867112-CESC,UCEC
ENSG00000261183ENST00000564302CALD1ENSG00000122786ENST00000417172-0.3294331-CHOL,CESC,UCEC
ENSG00000261183ENST00000564302ROCK2ENSG00000134318ENST00000401753-0.124914-CESC,UCEC
ENSG00000261183ENST00000568419PKD2ENSG00000118762ENST00000508588-0.1051103-CESC,UCEC
ENSG00000261183ENST00000568419PKD2ENSG00000118762ENST00000502363-0.68679-CESC,UCEC
ENSG00000261183ENST00000568419CALD1ENSG00000122786ENST00000417172-0.297929-CHOL,CESC,UCEC
ENSG00000261183ENST00000568525PKD2ENSG00000118762ENST00000508588-0.1166119-CESC,UCEC
ENSG00000261183ENST00000568525PKD2ENSG00000118762ENST00000502363-0.686725-CESC,UCEC
ENSG00000261183ENST00000568525CALD1ENSG00000122786ENST00000417172-0.297945-CHOL,CESC,UCEC
ENSG00000261183ENST00000568525ROCK2ENSG00000134318ENST00000401753-0.1194370-CESC,UCEC
ENSG00000261183ENST00000563217SEC24AENSG00000113615ENST00000513123-0.1186102-CHOL
ENSG00000261183ENST00000563217PKD2ENSG00000118762ENST00000508588-0.1362111-CESC,UCEC
ENSG00000261183ENST00000563217PKD2ENSG00000118762ENST00000502363-0.686765-CESC,UCEC
ENSG00000261183ENST00000563217CALD1ENSG00000122786ENST00000417172-0.1483195-CHOL,CESC,UCEC
ENSG00000261183ENST00000565315YAP1ENSG00000137693ENST00000531439-0.3538131-UCEC
ENSG00000261183ENST00000565315DIAPH2ENSG00000147202ENST00000355827-0.15446KIRC-
ENSG00000261183ENST00000565315DIAPH2ENSG00000147202ENST00000373049-0.15446KIRC-
ENSG00000261183ENST00000565315DIAPH2ENSG00000147202ENST00000373054-0.806454KIRC-
ENSG00000261183ENST00000565315RNF144AENSG00000151692ENST00000432850-2.6100261-CESC,UCEC
ENSG00000261183ENST00000565315IFNAR2ENSG00000159110ENST00000382264-0.1640354KIRC-
ENSG00000261183ENST00000565315IFNAR2ENSG00000159110ENST00000413881-0.42171KIRC-
ENSG00000261183ENST00000564302YAP1ENSG00000137693ENST00000531439-2.43674-UCEC
ENSG00000261183ENST00000564302YAP1ENSG00000137693ENST00000524575-0.1020332-UCEC
ENSG00000261183ENST00000564302DIAPH2ENSG00000147202ENST00000355827-0.154461KIRC-
ENSG00000261183ENST00000564302DIAPH2ENSG00000147202ENST00000373049-0.154461KIRC-
ENSG00000261183ENST00000564302DIAPH2ENSG00000147202ENST00000373054-0.8064109KIRC-
ENSG00000261183ENST00000564302RNF144AENSG00000151692ENST00000432850-0.6850321-CESC,UCEC
ENSG00000261183ENST00000564302IFNAR2ENSG00000159110ENST00000382264-0.1640553KIRC-
ENSG00000261183ENST00000564302IFNAR2ENSG00000159110ENST00000413881-0.175342KIRC-
ENSG00000261183ENST00000568419YAP1ENSG00000137693ENST00000531439-0.353883-UCEC
ENSG00000261183ENST00000568419YAP1ENSG00000137693ENST00000524575-0.1177322-UCEC
ENSG00000261183ENST00000568419DIAPH2ENSG00000147202ENST00000355827-0.1237468KIRC-
ENSG00000261183ENST00000568419DIAPH2ENSG00000147202ENST00000373049-0.1237471KIRC-
ENSG00000261183ENST00000568419DIAPH2ENSG00000147202ENST00000373054-0.80646KIRC-
ENSG00000261183ENST00000568419RNF144AENSG00000151692ENST00000432850-0.6850218-CESC,UCEC
ENSG00000261183ENST00000568419IFNAR2ENSG00000159110ENST00000382264-0.1640543KIRC-
ENSG00000261183ENST00000568419IFNAR2ENSG00000159110ENST00000404220-0.10051KIRC-
ENSG00000261183ENST00000568419IFNAR2ENSG00000159110ENST00000413881-0.3068384KIRC-
ENSG00000261183ENST00000568525YAP1ENSG00000137693ENST00000531439-0.353899-UCEC
ENSG00000261183ENST00000568525DIAPH2ENSG00000147202ENST00000355827-0.1045351KIRC-
ENSG00000261183ENST00000568525DIAPH2ENSG00000147202ENST00000373054-0.806422KIRC-
ENSG00000261183ENST00000568525RNF144AENSG00000151692ENST00000432850-0.6850234-CESC,UCEC
ENSG00000261183ENST00000568525IFNAR2ENSG00000159110ENST00000382264-0.2571126KIRC-
ENSG00000261183ENST00000568525IFNAR2ENSG00000159110ENST00000413881-0.152981KIRC-
ENSG00000261183ENST00000563217YAP1ENSG00000137693ENST00000531439-0.3633133-UCEC
ENSG00000261183ENST00000563217DIAPH2ENSG00000147202ENST00000373054-0.8500160KIRC-
ENSG00000261183ENST00000563217RNF144AENSG00000151692ENST00000320892-0.11191-CESC,UCEC
ENSG00000261183ENST00000563217RNF144AENSG00000151692ENST00000432850-0.6850226-CESC,UCEC
ENSG00000261183ENST00000563217IFNAR2ENSG00000159110ENST00000382264-0.2571118KIRC-
ENSG00000261183ENST00000563217IFNAR2ENSG00000159110ENST00000404220-0.10221KIRC-
ENSG00000261183ENST00000563217IFNAR2ENSG00000159110ENST00000413881-0.1373176KIRC-
ENSG00000261183ENST00000565315ABCA1ENSG00000165029ENST00000423487-0.15831KIRCCHOL
ENSG00000261183ENST00000565315ABCA1ENSG00000165029ENST00000374733-0.1049176KIRCCHOL
ENSG00000261183ENST00000565315TBC1D2BENSG00000167202ENST00000465531-0.114556-CESC,UCEC
ENSG00000261183ENST00000565315SNTB2ENSG00000168807ENST00000525632-0.25052-UCEC
ENSG00000261183ENST00000565315OLFML1ENSG00000183801ENST00000530135-0.1178274-CHOL,CESC,UCEC
ENSG00000261183ENST00000564302ABCA1ENSG00000165029ENST00000374733-0.1049375KIRCCHOL
ENSG00000261183ENST00000564302SNTB2ENSG00000168807ENST00000525632-0.3207281-UCEC
ENSG00000261183ENST00000564302OLFML1ENSG00000183801ENST00000530135-0.1228300-CHOL,CESC,UCEC
ENSG00000261183ENST00000568419ABCA1ENSG00000165029ENST00000423487-0.1040127KIRCCHOL
ENSG00000261183ENST00000568419ABCA1ENSG00000165029ENST00000374733-0.1049365KIRCCHOL
ENSG00000261183ENST00000568419TBC1D2BENSG00000167202ENST00000465531-0.1302245-CESC,UCEC
ENSG00000261183ENST00000568419SNTB2ENSG00000168807ENST00000525632-0.3207178-UCEC
ENSG00000261183ENST00000568419OLFML1ENSG00000183801ENST00000530135-0.1178463-CHOL,CESC,UCEC
ENSG00000261183ENST00000568525ABCA1ENSG00000165029ENST00000423487-0.1018143KIRCCHOL
ENSG00000261183ENST00000568525TBC1D2BENSG00000167202ENST00000465531-0.1239175-CESC,UCEC
ENSG00000261183ENST00000568525SNTB2ENSG00000168807ENST00000525632-0.3207194-UCEC
ENSG00000261183ENST00000568525OLFML1ENSG00000183801ENST00000530135-0.1005124-CHOL,CESC,UCEC
ENSG00000261183ENST00000563217ABCA1ENSG00000165029ENST00000374733-0.2647135KIRCCHOL
ENSG00000261183ENST00000563217RAB8BENSG00000166128ENST00000558119-0.1247107-CESC,UCEC
ENSG00000261183ENST00000563217TBC1D2BENSG00000167202ENST00000465531-0.1816167-CESC,UCEC
ENSG00000261183ENST00000563217TBC1D2BENSG00000167202ENST00000300584-0.15131-CESC,UCEC
ENSG00000261183ENST00000563217TBC1D2BENSG00000167202ENST00000409931-0.15131-CESC,UCEC
ENSG00000261183ENST00000563217SNTB2ENSG00000168807ENST00000525632-0.3207186-UCEC
ENSG00000261183ENST00000563217ANO6ENSG00000177119ENST00000423947-0.122764-CESC,UCEC
ENSG00000261183ENST00000565315PPP1R12AENSG00000058272ENST00000550299-0.146564-CESC,UCEC
ENSG00000261183ENST00000565315PPP1R12AENSG00000058272ENST00000546369-0.5400509-CESC,UCEC
ENSG00000261183ENST00000565315SMG6ENSG00000070366ENST00000536871-0.2805298-UCEC
ENSG00000261183ENST00000565315MAP4K4ENSG00000071054ENST00000347699-0.2714258KIRC-
ENSG00000261183ENST00000565315STK10ENSG00000072786ENST00000520476-0.151783KIRC-
ENSG00000261183ENST00000565315EVCENSG00000072840ENST00000509451-0.127134-UCEC
ENSG00000261183ENST00000565315FERMT2ENSG00000073712ENST00000553663-0.28181-CHOL,CESC,UCEC,LIHC
ENSG00000261183ENST00000565315FERMT2ENSG00000073712ENST00000399304-0.1857108-CHOL,CESC,UCEC,LIHC
ENSG00000261183ENST00000564302SMG6ENSG00000070366ENST00000536871-0.2805497-UCEC
ENSG00000261183ENST00000564302MAP4K4ENSG00000071054ENST00000425019-0.101938KIRC-
ENSG00000261183ENST00000564302MAP4K4ENSG00000071054ENST00000347699-0.2714457KIRC-
ENSG00000261183ENST00000564302MAP4K4ENSG00000071054ENST00000421882-0.101938KIRC-
ENSG00000261183ENST00000564302STK10ENSG00000072786ENST00000520476-0.13281KIRC-
ENSG00000261183ENST00000564302EVCENSG00000072840ENST00000509451-0.1518214-UCEC
ENSG00000261183ENST00000564302FERMT2ENSG00000073712ENST00000399304-0.1014163-CHOL,CESC,UCEC,LIHC
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ENSG00000261183ENST00000568419KSR1ENSG00000141068ENST00000580430-0.1256148KIRCUCEC
ENSG00000261183ENST00000568419KSR1ENSG00000141068ENST00000578981-0.14516KIRCUCEC
ENSG00000261183ENST00000568525MSRB3ENSG00000174099ENST00000535664-0.1307104-CESC,UCEC
ENSG00000261183ENST00000568525MSRB3ENSG00000174099ENST00000446731-0.167229-CESC,UCEC
ENSG00000261183ENST00000568525FNBP1ENSG00000187239ENST00000355681-0.9950403-CESC,UCEC
ENSG00000261183ENST00000568525KANK2ENSG00000197256ENST00000589894-0.120749-CESC,UCEC
ENSG00000261183ENST00000568525CDH5ENSG00000179776ENST00000565334-0.12031KIRCCESC,UCEC
ENSG00000261183ENST00000568525CDH5ENSG00000179776ENST00000563425-0.11541KIRCCESC,UCEC
ENSG00000261183ENST00000568525CDH5ENSG00000179776ENST00000539168-0.146846KIRCCESC,UCEC
ENSG00000261183ENST00000568525KSR1ENSG00000141068ENST00000398982-0.114617KIRCUCEC
ENSG00000261183ENST00000568525KSR1ENSG00000141068ENST00000580430-0.1256164KIRCUCEC
ENSG00000261183ENST00000568525KSR1ENSG00000141068ENST00000578981-0.145122KIRCUCEC
ENSG00000261183ENST00000563217TSPAN18ENSG00000157570ENST00000340160-0.10771KIRCCESC,UCEC
ENSG00000261183ENST00000563217TSPAN18ENSG00000157570ENST00000518429-0.1078112KIRCCESC,UCEC
ENSG00000261183ENST00000563217CREBRFENSG00000164463ENST00000520420-0.1035164-CESC,UCEC
ENSG00000261183ENST00000563217MSRB3ENSG00000174099ENST00000535664-0.3986120-CESC,UCEC
ENSG00000261183ENST00000563217TMEM64ENSG00000180694ENST00000422900-0.3294133-UCEC
ENSG00000261183ENST00000563217FNBP1ENSG00000187239ENST00000355681-0.365038-CESC,UCEC
ENSG00000261183ENST00000563217KANK2ENSG00000197256ENST00000589894-0.1691148-CESC,UCEC
ENSG00000261183ENST00000563217CDH5ENSG00000179776ENST00000539168-0.104895KIRCCESC,UCEC
ENSG00000261183ENST00000563217PECAM1ENSG00000261371ENST00000563924-0.10161KIRCCESC,UCEC
ENSG00000261183ENST00000563217KSR1ENSG00000141068ENST00000580430-0.157439KIRCUCEC
ENSG00000261183ENST00000565315WIPF1ENSG00000115935ENST00000392546-0.11211KIRC-
ENSG00000261183ENST00000565315WIPF1ENSG00000115935ENST00000410117-0.1452255KIRC-
ENSG00000261183ENST00000565315AKT3ENSG00000117020ENST00000336199-0.1090132-CESC,UCEC
ENSG00000261183ENST00000565315AKT3ENSG00000117020ENST00000366540-0.2705358-CESC,UCEC
ENSG00000261183ENST00000565315RASSF8ENSG00000123094ENST00000539545-0.1063227-CESC,UCEC
ENSG00000261183ENST00000565315LRP1ENSG00000123384ENST00000553277-0.11041-CHOL,UCEC
ENSG00000261183ENST00000565315MACF1ENSG00000127603ENST00000484793-0.106371-CESC,UCEC
ENSG00000261183ENST00000565315IL6STENSG00000134352ENST00000502326-0.1443280-CHOL,CESC,UCEC,LIHC
ENSG00000261183ENST00000565315DYSFENSG00000135636ENST00000409762-0.2017248KIRCCHOL
ENSG00000261183ENST00000564302WIPF1ENSG00000115935ENST00000392546-0.11421KIRC-
ENSG00000261183ENST00000564302WIPF1ENSG00000115935ENST00000410117-0.1452454KIRC-
ENSG00000261183ENST00000564302AKT3ENSG00000117020ENST00000336199-0.1099331-CESC,UCEC
ENSG00000261183ENST00000564302AKT3ENSG00000117020ENST00000366540-0.2705557-CESC,UCEC
ENSG00000261183ENST00000564302RASSF8ENSG00000123094ENST00000539545-0.1063426-CESC,UCEC
ENSG00000261183ENST00000564302MACF1ENSG00000127603ENST00000484793-0.1009129-CESC,UCEC
ENSG00000261183ENST00000564302IL6STENSG00000134352ENST00000502326-0.1443479-CHOL,CESC,UCEC,LIHC
ENSG00000261183ENST00000564302DYSFENSG00000135636ENST00000409762-0.2017447KIRCCHOL
ENSG00000261183ENST00000568419WIPF1ENSG00000115935ENST00000409415-0.10271KIRC-
ENSG00000261183ENST00000568419WIPF1ENSG00000115935ENST00000410117-0.1452444KIRC-
ENSG00000261183ENST00000568419AKT3ENSG00000117020ENST00000366540-0.2705547-CESC,UCEC
ENSG00000261183ENST00000568419RASSF8ENSG00000123094ENST00000539545-0.1063416-CESC,UCEC
ENSG00000261183ENST00000568419MACF1ENSG00000127603ENST00000484793-0.100926-CESC,UCEC
ENSG00000261183ENST00000568419MACF1ENSG00000127603ENST00000530275-0.1187246-CESC,UCEC
ENSG00000261183ENST00000568419IL6STENSG00000134352ENST00000502326-0.1443469-CHOL,CESC,UCEC,LIHC
ENSG00000261183ENST00000568419DYSFENSG00000135636ENST00000409762-0.2017437KIRCCHOL
ENSG00000261183ENST00000568525WIPF1ENSG00000115935ENST00000392546-0.11001KIRC-
ENSG00000261183ENST00000568525WIPF1ENSG00000115935ENST00000410117-0.119291KIRC-
ENSG00000261183ENST00000568525AKT3ENSG00000117020ENST00000366540-0.640010-CESC,UCEC
ENSG00000261183ENST00000568525MACF1ENSG00000127603ENST00000484793-0.100942-CESC,UCEC
ENSG00000261183ENST00000568525MACF1ENSG00000127603ENST00000372915-0.12281-CESC,UCEC
ENSG00000261183ENST00000568525MACF1ENSG00000127603ENST00000361689-0.11711-CESC,UCEC
ENSG00000261183ENST00000568525MACF1ENSG00000127603ENST00000372925-0.11711-CESC,UCEC
ENSG00000261183ENST00000568525MACF1ENSG00000127603ENST00000289893-0.11711-CESC,UCEC
ENSG00000261183ENST00000568525MACF1ENSG00000127603ENST00000360115-0.11711-CESC,UCEC
ENSG00000261183ENST00000568525MACF1ENSG00000127603ENST00000446276-0.11711-CESC,UCEC
ENSG00000261183ENST00000568525MACF1ENSG00000127603ENST00000442046-0.11711-CESC,UCEC
ENSG00000261183ENST00000568525IL6STENSG00000134352ENST00000502326-0.2380381-CHOL,CESC,UCEC,LIHC
ENSG00000261183ENST00000568525DYSFENSG00000135636ENST00000409762-0.184541KIRCCHOL
ENSG00000261183ENST00000563217AKT3ENSG00000117020ENST00000366540-0.6740113-CESC,UCEC
ENSG00000261183ENST00000563217NEK6ENSG00000119408ENST00000373603-0.10351KIRCCHOL
ENSG00000261183ENST00000563217NEK6ENSG00000119408ENST00000540326-0.10351KIRCCHOL
ENSG00000261183ENST00000563217NEK6ENSG00000119408ENST00000373600-0.10351KIRCCHOL
ENSG00000261183ENST00000563217NEK6ENSG00000119408ENST00000320246-0.10351KIRCCHOL
ENSG00000261183ENST00000563217NEK6ENSG00000119408ENST00000545174-0.10351KIRCCHOL
ENSG00000261183ENST00000563217NEK6ENSG00000119408ENST00000546191-0.10351KIRCCHOL
ENSG00000261183ENST00000563217NEK6ENSG00000119408ENST00000539416-0.10351KIRCCHOL
ENSG00000261183ENST00000563217NEK6ENSG00000119408ENST00000394199-0.10351KIRCCHOL
ENSG00000261183ENST00000563217RASSF8ENSG00000123094ENST00000611440-0.14271-CESC,UCEC
ENSG00000261183ENST00000563217RASSF8ENSG00000123094ENST00000539545-3.1050217-CESC,UCEC
ENSG00000261183ENST00000563217STARD8ENSG00000130052ENST00000523864-0.11841-CHOL,UCEC
ENSG00000261183ENST00000563217STARD8ENSG00000130052ENST00000252336-0.10041-CHOL,UCEC
ENSG00000261183ENST00000563217STARD8ENSG00000130052ENST00000374599-0.10041-CHOL,UCEC
ENSG00000261183ENST00000563217STARD8ENSG00000130052ENST00000374597-0.10041-CHOL,UCEC
ENSG00000261183ENST00000563217STARD13ENSG00000133121ENST00000336934-0.11871-CESC,UCEC
ENSG00000261183ENST00000563217STARD13ENSG00000133121ENST00000255486-0.11871-CESC,UCEC
ENSG00000261183ENST00000563217STARD13ENSG00000133121ENST00000399365-0.11871-CESC,UCEC
ENSG00000261183ENST00000563217DYSFENSG00000135636ENST00000409762-0.1512141KIRCCHOL
ENSG00000261183ENST00000565315DYSFENSG00000135636ENST00000409582-0.2017248KIRCCHOL
ENSG00000261183ENST00000565315DYSFENSG00000135636ENST00000429174-0.2017248KIRCCHOL
ENSG00000261183ENST00000565315DYSFENSG00000135636ENST00000413539-0.2017248KIRCCHOL
ENSG00000261183ENST00000565315DYSFENSG00000135636ENST00000258104-0.1383128KIRCCHOL
ENSG00000261183ENST00000565315DYSFENSG00000135636ENST00000409651-0.2017248KIRCCHOL
ENSG00000261183ENST00000565315DYSFENSG00000135636ENST00000394120-0.2017248KIRCCHOL
ENSG00000261183ENST00000565315DYSFENSG00000135636ENST00000409744-0.2017248KIRCCHOL
ENSG00000261183ENST00000565315DYSFENSG00000135636ENST00000409366-0.2017248KIRCCHOL
ENSG00000261183ENST00000565315DYSFENSG00000135636ENST00000410020-0.2017248KIRCCHOL
ENSG00000261183ENST00000565315DYSFENSG00000135636ENST00000410041-0.2017248KIRCCHOL
ENSG00000261183ENST00000565315FCGR2AENSG00000143226ENST00000536731-0.1289195KIRC-
ENSG00000261183ENST00000565315OSMRENSG00000145623ENST00000502536-0.22941KIRC-
ENSG00000261183ENST00000565315OSMRENSG00000145623ENST00000513831-0.1304209KIRC-
ENSG00000261183ENST00000565315DIXDC1ENSG00000150764ENST00000615255-0.13841-UCEC
ENSG00000261183ENST00000565315MRASENSG00000158186ENST00000474559-0.326993-CESC,UCEC
ENSG00000261183ENST00000565315DDR2ENSG00000162733ENST00000367921-0.1089183-CESC,UCEC
ENSG00000261183ENST00000565315DDR2ENSG00000162733ENST00000458105-0.1413161-CESC,UCEC
ENSG00000261183ENST00000564302DYSFENSG00000135636ENST00000409582-0.2017447KIRCCHOL
ENSG00000261183ENST00000564302DYSFENSG00000135636ENST00000429174-0.2017447KIRCCHOL
ENSG00000261183ENST00000564302DYSFENSG00000135636ENST00000413539-0.2017447KIRCCHOL
ENSG00000261183ENST00000564302DYSFENSG00000135636ENST00000258104-0.1383327KIRCCHOL
ENSG00000261183ENST00000564302DYSFENSG00000135636ENST00000409651-0.2017447KIRCCHOL
ENSG00000261183ENST00000564302DYSFENSG00000135636ENST00000394120-0.2017447KIRCCHOL
ENSG00000261183ENST00000564302DYSFENSG00000135636ENST00000409744-0.2017447KIRCCHOL
ENSG00000261183ENST00000564302DYSFENSG00000135636ENST00000409366-0.2017447KIRCCHOL
ENSG00000261183ENST00000564302DYSFENSG00000135636ENST00000410020-0.2017447KIRCCHOL
ENSG00000261183ENST00000564302DYSFENSG00000135636ENST00000410041-0.2017447KIRCCHOL
ENSG00000261183ENST00000564302FCGR2AENSG00000143226ENST00000536731-0.17351KIRC-
ENSG00000261183ENST00000564302OSMRENSG00000145623ENST00000502536-0.11341KIRC-
ENSG00000261183ENST00000564302OSMRENSG00000145623ENST00000513831-0.1304408KIRC-
ENSG00000261183ENST00000564302MRASENSG00000158186ENST00000474559-0.2360147-CESC,UCEC
ENSG00000261183ENST00000564302DDR2ENSG00000162733ENST00000367921-0.13261-CESC,UCEC
ENSG00000261183ENST00000564302DDR2ENSG00000162733ENST00000458105-0.182012-CESC,UCEC
ENSG00000261183ENST00000564302DDR2ENSG00000162733ENST00000433757-0.1006226-CESC,UCEC
ENSG00000261183ENST00000568419DYSFENSG00000135636ENST00000409582-0.2017437KIRCCHOL
ENSG00000261183ENST00000568419DYSFENSG00000135636ENST00000429174-0.2017437KIRCCHOL
ENSG00000261183ENST00000568419DYSFENSG00000135636ENST00000413539-0.2017437KIRCCHOL
ENSG00000261183ENST00000568419DYSFENSG00000135636ENST00000258104-0.1351317KIRCCHOL
ENSG00000261183ENST00000568419DYSFENSG00000135636ENST00000409651-0.2017437KIRCCHOL
ENSG00000261183ENST00000568419DYSFENSG00000135636ENST00000394120-0.2017437KIRCCHOL
ENSG00000261183ENST00000568419DYSFENSG00000135636ENST00000409744-0.2017437KIRCCHOL
ENSG00000261183ENST00000568419DYSFENSG00000135636ENST00000409366-0.2017437KIRCCHOL
ENSG00000261183ENST00000568419DYSFENSG00000135636ENST00000410020-0.2017437KIRCCHOL
ENSG00000261183ENST00000568419DYSFENSG00000135636ENST00000410041-0.2017437KIRCCHOL
ENSG00000261183ENST00000568419FCGR2AENSG00000143226ENST00000536731-0.1476296KIRC-
ENSG00000261183ENST00000568419NXPE3ENSG00000144815ENST00000273347-0.1387234-UCEC
ENSG00000261183ENST00000568419NXPE3ENSG00000144815ENST00000491511-0.10371-UCEC
ENSG00000261183ENST00000568419NXPE3ENSG00000144815ENST00000422132-0.10371-UCEC
ENSG00000261183ENST00000568419OSMRENSG00000145623ENST00000513831-0.1225196KIRC-
ENSG00000261183ENST00000568419DIXDC1ENSG00000150764ENST00000529225-0.10031-UCEC
ENSG00000261183ENST00000568419DIXDC1ENSG00000150764ENST00000440460-0.11801-UCEC
ENSG00000261183ENST00000568419DIXDC1ENSG00000150764ENST00000615255-0.142979-UCEC
ENSG00000261183ENST00000568419MRASENSG00000158186ENST00000474559-0.236044-CESC,UCEC
ENSG00000261183ENST00000568419C1RENSG00000159403ENST00000536053-0.1398216KIRCCHOL,UCEC,LIHC
ENSG00000261183ENST00000568419C1RENSG00000159403ENST00000535233-0.1398216KIRCCHOL,UCEC,LIHC
ENSG00000261183ENST00000568419DDR2ENSG00000162733ENST00000367921-0.1089372-CESC,UCEC
ENSG00000261183ENST00000568419DDR2ENSG00000162733ENST00000458105-0.2502248-CESC,UCEC
ENSG00000261183ENST00000568525DYSFENSG00000135636ENST00000409582-0.184541KIRCCHOL
ENSG00000261183ENST00000568525DYSFENSG00000135636ENST00000429174-0.184541KIRCCHOL
ENSG00000261183ENST00000568525DYSFENSG00000135636ENST00000413539-0.184541KIRCCHOL
ENSG00000261183ENST00000568525DYSFENSG00000135636ENST00000258104-0.13811KIRCCHOL
ENSG00000261183ENST00000568525DYSFENSG00000135636ENST00000409651-0.184541KIRCCHOL
ENSG00000261183ENST00000568525DYSFENSG00000135636ENST00000394120-0.184541KIRCCHOL
ENSG00000261183ENST00000568525DYSFENSG00000135636ENST00000409744-0.184541KIRCCHOL
ENSG00000261183ENST00000568525DYSFENSG00000135636ENST00000409366-0.184541KIRCCHOL
ENSG00000261183ENST00000568525DYSFENSG00000135636ENST00000410020-0.184541KIRCCHOL
ENSG00000261183ENST00000568525DYSFENSG00000135636ENST00000410041-0.184541KIRCCHOL
ENSG00000261183ENST00000568525FCGR2AENSG00000143226ENST00000536731-0.1508164KIRC-
ENSG00000261183ENST00000568525ATP10DENSG00000145246ENST00000273859-0.10161-UCEC
ENSG00000261183ENST00000568525OSMRENSG00000145623ENST00000502536-0.22941KIRC-
ENSG00000261183ENST00000568525LATS2ENSG00000150457ENST00000382592-0.11001-CESC,UCEC
ENSG00000261183ENST00000568525MRASENSG00000158186ENST00000423968-0.11651-CESC,UCEC
ENSG00000261183ENST00000568525MRASENSG00000158186ENST00000464896-0.11651-CESC,UCEC
ENSG00000261183ENST00000568525MRASENSG00000158186ENST00000474559-0.236060-CESC,UCEC
ENSG00000261183ENST00000568525DDR2ENSG00000162733ENST00000367921-0.13201-CESC,UCEC
ENSG00000261183ENST00000568525DDR2ENSG00000162733ENST00000458105-0.17609-CESC,UCEC
ENSG00000261183ENST00000563217DYSFENSG00000135636ENST00000409582-0.1512141KIRCCHOL
ENSG00000261183ENST00000563217DYSFENSG00000135636ENST00000429174-0.1512141KIRCCHOL
ENSG00000261183ENST00000563217DYSFENSG00000135636ENST00000413539-0.1512141KIRCCHOL
ENSG00000261183ENST00000563217DYSFENSG00000135636ENST00000409651-0.1512141KIRCCHOL
ENSG00000261183ENST00000563217DYSFENSG00000135636ENST00000394120-0.1512141KIRCCHOL
ENSG00000261183ENST00000563217DYSFENSG00000135636ENST00000409744-0.1512141KIRCCHOL
ENSG00000261183ENST00000563217DYSFENSG00000135636ENST00000409366-0.1512141KIRCCHOL
ENSG00000261183ENST00000563217DYSFENSG00000135636ENST00000410020-0.1512141KIRCCHOL
ENSG00000261183ENST00000563217DYSFENSG00000135636ENST00000410041-0.1512141KIRCCHOL
ENSG00000261183ENST00000563217FCGR2AENSG00000143226ENST00000536731-0.1113128KIRC-
ENSG00000261183ENST00000563217ATP8B2ENSG00000143515ENST00000368489-0.13461-CESC,UCEC
ENSG00000261183ENST00000563217NXPE3ENSG00000144815ENST00000273347-0.3363140-UCEC
ENSG00000261183ENST00000563217NXPE3ENSG00000144815ENST00000422132-0.10201-UCEC
ENSG00000261183ENST00000563217NXPE3ENSG00000144815ENST00000616286-0.10201-UCEC
ENSG00000261183ENST00000563217SLC16A2ENSG00000147100ENST00000587091-0.13121-CHOL,UCEC,LIHC
ENSG00000261183ENST00000563217SLC16A2ENSG00000147100ENST00000590447-0.13121-CHOL,UCEC,LIHC
ENSG00000261183ENST00000563217ASAP1ENSG00000153317ENST00000521075-0.10381KIRC-
ENSG00000261183ENST00000563217MRASENSG00000158186ENST00000474559-0.1864133-CESC,UCEC
ENSG00000261183ENST00000563217ITGA5ENSG00000161638ENST00000547197-0.122975KIRC-
ENSG00000261183ENST00000563217ITGA5ENSG00000161638ENST00000553071-0.126656KIRC-
ENSG00000261183ENST00000563217DDR2ENSG00000162733ENST00000458105-0.370467-CESC,UCEC
ENSG00000261183ENST00000563217DDR2ENSG00000162733ENST00000433757-0.1328131-CESC,UCEC

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lncRNAs regulate mRNA by competing with miRNA

lncrna_miRNA
check buttonlncRNA regulates mRNA by competing the miRNA binding site with mRNA.
LncRNA Ensembl IDlncRNA-miRNA-mRNACancer Types

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lncRNA coding potential

check buttonORFfinder result for the gencode.v22.lncRNA.transcript.fa.
lncRNA Ensembl IDlncRNA ENST IDlength(AA)start at transcriptend at transcript
ENSG00000261183.4ENST00000565315.110620340
ENSG00000261183.4ENST00000564302.4732202
ENSG00000261183.4ENST00000568419.11424261
ENSG00000261183.4ENST00000568525.176154384
ENSG00000261183.4ENST00000563217.1982941