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lncRNA: ENSG00000260710 |
Summary for RP11-616M22.7 |
 Gene summary |
| Gene information | Ensembl ID | ENSG00000260710 | Gene symbol | RP11-616M22.7 |
| Gene name | ||
| HGNC | ||
| Entrez ID | ||
| Gene type | lincRNA | |
| Synonyms | ||
| UniProtAcc |
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Structure and expression level for RP11-616M22.7 |
| AS events and RNA A-to-I editing events of lncRNA in TCGA based on Genvode V22 structure. |
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| Differentially expressed gene analysis between cancer and normal samples. |
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| Ensembl ID | Base mean | log2FC(AD/control) | lfcSE | Stat | P-value | Adjc.p-value | DEG direction | Cancer type |
| ENSG00000260710 | 2.327456e+02 | 4.345900e+00 | 3.730719e-01 | 1.164896e+01 | 2.320000e-31 | 9.730000e-30 | UP | KICH |
| ENSG00000260710 | 2.744587e+01 | 5.125144e+00 | 1.534077e+00 | 3.340865e+00 | 8.351770e-04 | 6.859936e-03 | UP | CESC |
| ENSG00000260710 | 1.028034e+02 | 2.376720e+00 | 2.036076e-01 | 1.167304e+01 | 1.750000e-31 | 1.880000e-30 | UP | BRCA |
| ENSG00000260710 | 5.895630e+01 | 1.313846e+00 | 1.933538e-01 | 6.795035e+00 | 1.080000e-11 | 8.120000e-11 | UP | LIHC |
| Correlation between lncRNAs and cancer stages. |
| LncRNA Ensembl ID | Correlation | P-value | Cancer Type | Adjc.p-value |
| ENSG00000260710 | 3.482670e-01 | 8.244549e-04 | KICH | 1.160456e-03 |
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lncRNA-Protein interaction for RP11-616M22.7 |
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| lncRNA-epigenetic factor interaction (#cancer types with positive correlation >= 5). |
| LncRNA Ensembl ID | LncRNA ENST ID | LncRNA Name | Protein Ensembl ID | Protein Name | CatRAPID Score | Lncpro Score | UniPortID | Gene Subtype | Public source |
| lncRNA-transcript factor interaction (#cancer types with positive correlation >= 5). |
| LncRNA Ensembl ID | LncRNA ENST ID | LncRNA Name | Protein Ensembl ID | Protein Name | CatRAPID Score | Lncpro Score | UniPortID | Gene Subtype | Public source |
| lncRNA-RNA binding protein interaction (#cancer types with positive correlation >= 5). |
| LncRNA Ensembl ID | LncRNA ENST ID | LncRNA Name | Protein Ensembl ID | Protein Name | CatRAPID Score | Lncpro Score | UniPortID | Gene Subtype | Public source |
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