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lncRNA: ENSG00000260051 |
Summary for LA16c-390E6.4 |
Gene summary |
Gene information | Ensembl ID | ENSG00000260051 | Gene symbol | LA16c-390E6.4 |
Gene name | ||
HGNC | ||
Entrez ID | ||
Gene type | antisense | |
Synonyms | ||
UniProtAcc |
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Structure and expression level for LA16c-390E6.4 |
Differentially expressed gene analysis between cancer and normal samples. |
Ensembl ID | Base mean | log2FC(AD/control) | lfcSE | Stat | P-value | Adjc.p-value | DEG direction | Cancer type |
ENSG00000260051 | 3.370465e+01 | 1.079274e+00 | 2.345730e-01 | 4.601017e+00 | 4.200000e-06 | 1.650000e-05 | UP | KIRP |
ENSG00000260051 | 2.946932e+01 | 1.004670e+00 | 1.826624e-01 | 5.500146e+00 | 3.790000e-08 | 1.160000e-07 | UP | LUSC |
ENSG00000260051 | 2.937261e+01 | 1.562409e+00 | 1.821876e-01 | 8.575826e+00 | 9.840000e-18 | 8.490000e-17 | UP | LUAD |
ENSG00000260051 | 3.772394e+01 | 1.295293e+00 | 2.068712e-01 | 6.261352e+00 | 3.820000e-10 | 4.900000e-09 | UP | STAD |
Correlation between lncRNAs and cancer stages. |
LncRNA Ensembl ID | Correlation | P-value | Cancer Type | Adjc.p-value |
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lncRNA-Protein interaction for LA16c-390E6.4 |
lncRNA-epigenetic factor interaction (#cancer types with positive correlation >= 5). |
LncRNA Ensembl ID | LncRNA ENST ID | LncRNA Name | Protein Ensembl ID | Protein Name | CatRAPID Score | Lncpro Score | UniPortID | Gene Subtype | Public source |
ENSG00000260051 | ENST00000563610 | LA16c-390E6.4 | ENSG00000171634 | BPTF | 11.76 | 90.6878 | Q12830 | TF,Epi | NA |
ENSG00000260051 | ENST00000563610 | LA16c-390E6.4 | ENSG00000167548 | KMT2D | 11.35 | 93.0629 | O14686 | Epi | NA |
ENSG00000260051 | ENST00000563610 | LA16c-390E6.4 | ENSG00000185658 | BRWD1 | 10.34 | 90.7979 | Q9NSI6 | Epi | NA |
ENSG00000260051 | ENST00000563610 | LA16c-390E6.4 | ENSG00000118058 | KMT2A | 5.7 | 93.6222 | Q03164 | TF,Epi | NA |
ENSG00000260051 | ENST00000563610 | LA16c-390E6.4 | ENSG00000183495 | EP400 | 11.41 | 91.0266 | Q96L91 | Epi | NA |
ENSG00000260051 | ENST00000563610 | LA16c-390E6.4 | ENSG00000055609 | KMT2C | 4.69 | 92.2669 | Q8NEZ4 | Epi | NA |
lncRNA-transcript factor interaction (#cancer types with positive correlation >= 5). |
LncRNA Ensembl ID | LncRNA ENST ID | LncRNA Name | Protein Ensembl ID | Protein Name | CatRAPID Score | Lncpro Score | UniPortID | Gene Subtype | Public source |
ENSG00000260051 | ENST00000563610 | LA16c-390E6.4 | ENSG00000171634 | BPTF | 11.76 | 91.4749 | Q12830 | TF,Epi | NA |
ENSG00000260051 | ENST00000563610 | LA16c-390E6.4 | ENSG00000118058 | KMT2A | 5.7 | 93.9321 | Q03164 | TF,Epi | NA |
lncRNA-RNA binding protein interaction (#cancer types with positive correlation >= 5). |
LncRNA Ensembl ID | LncRNA ENST ID | LncRNA Name | Protein Ensembl ID | Protein Name | CatRAPID Score | Lncpro Score | UniPortID | Gene Subtype | Public source |
ENSG00000260051 | ENST00000563610 | LA16c-390E6.4 | ENSG00000133226 | SRRM1 | 9.72 | 90.0309 | Q8IYB3 | RBP | NA |
ENSG00000260051 | ENST00000563610 | LA16c-390E6.4 | ENSG00000167978 | SRRM2 | 2.84 | 93.077 | Q9UQ35 | RBP | NA |
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